Spg002115 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002115
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold2: 26914991 .. 26921602 (-)
RNA-Seq ExpressionSpg002115
SyntenySpg002115
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTGAGGTAGAGGTAACTCAGGGTAAAACGGAAATTTGACCCAGCTGGAGTTACGAACACTCGTGAAGGACTAACTTGCCGTTATGGGTCGATATCCGTGGACACAGAAATATTCTGCAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATATTGACTAACTTGGTTAATGAGTTTAGCCAATTAGTCTCGTATCGTTGGAGCTTCTGATCTATAGGTCTACTAGGTCCCACTGGTAGCTCGTAAAGAGACTTGAGGCAATTAAGTATAAATTGTAAATTGAAAGTGTTCAATTTATTTAGGGGAATCATATAATATATATTGATACATTATAATATAAAGTTTATGAAACTTATAATATAATTTTGAATTAATTTCAAAATTATTTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAATTAATATGAATTGGATTCATATTAATATAAATAAGGGAAAAATACACTTTTAGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCATTGAGTTTTCAAACTCAACAATTTAGTCCCTGAGGTTTGGTTTTGGTTTCATTTTGGTCCCTCCATCCAATTTTTCGTTAATAGTTAACGGATTGCTGACATGGCAAATATTTAATATTAAAAAAAATCATTTTTTAAAATAAAAATTAAAAAATAATAAAAATATTATTTTTAATTTTATTTATTCTTTTCTCTCTCCCTTCTTCTTCTTCATCATCAAACCACCACCTCTACTGTTGCCGGCCGACCACCACCGTCGCTAGCCGACCACCGCCGCCGGAGCCAATCTTTTTTCCCCTCATTTTCTTTCTTTCCCTTCCTCTTTCTCTTCTTCTTCATCCTTGTCTTCATCGTTTTTATGTTCGGTGGTTTTAGATCTGACATTTGCAAGCTCAACGACGGCGTTTTCGAGCTCGACATCTTCAGATCTAACGTGTCCAAGGTCGACAGCGGCGTTTCGTGCACGACGACTTCAGATCTCGCCGGCGTTGGTCTCGGTCTTCGTTTCAAAGGCGTCTTCTCGATCTCAGATCTCGCTGACGACTTCAGATCTCGCCGACGACTTCAAATCTCGCCGACGACTTCAAATCTGAAAATGGTTTGGGTCTGTGTTTTTCAGTCGCCGACCCTCGCACGATGAAGAAACACCGGCTTGCCATCTACTTTCAATCGCCGACCTTCGCGCTTTCGAGCTCAACATCTTCAGATCTACTTGCGGCTTGCGATCGGAAAATCGAGAGAGAGAGGCCGTCGGATGAAGAAACATTGAGGAAGACGACTTTGGGTGGGTTTTTCTCGCCGGCGTGGAGGAGACATCAAGGGGGAGAGAGACGATGCCGGAGGAGTAAAAACTGAAACAAAATGGGACACAAAGATTTTACGAGCAAGATACCCAATTAAAGAAGCAATTCTACACACGCAACATCACTAACTCCATCGTTTACAACAACAATTTCGATTTGTTTACTGCACCAGCCGCTAATTGGAGTGTAAACCTGAGACTTTCCTTGGATCATTTACTCTTGTCATCTATTGTGGTTTCATGGTTGAATTTAAGTTGTTGGGATTTACTAATTGAAAAGAAGAAAAGAAAAGAATGGAAATAAAGAAGAAAAGAAAAGAAAAGAAAAGGAAAAGGAAAAGGAAAAACAAAAAAAAAAAGGGAAAAAGAAAAGAAAGGAAGTGGGAAATGAGAGCAAAAAAAAAAACCCACCACCGACAATGATCCTTTTCAGCTCATTTCCAGCCATTTTCTCATCATTTTCCATCCAAAATTTCAGAGCACTTGAGGGAGAGAGTGAAGGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAAAAGATAGGAAAAGCTCATGCAAAGGCAGCCATAGAAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGCGAGGTTTGATTTTCTTGAAAGTTAGTCCATTTTCTAACAAATTTCATGAAGGAAGCTTGAGCTAAATCTGATGAGAAGTTAATGGTTTTTGGAATGGAAAATAGAGCACAGGATTTTCGAGCAAAACAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGATCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTTGTATGGTTGGAAATATTATTCAATTTCCTACAACTGTCATGAAGAATTTGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCGCGTTTTCATTTCTTCAGGTACAATGTAGAGTGTTCAAAAATAAAGAGTTTGATGTATAGTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGTAGGTGTGGTATTGAATCTGGAAAATCTGGAAAGTAGAATGTGGAGTGAGATTTCTTATTCAAGTGTTTAGAATTCATGAGCATGGAAAGACAAAGCTAATTATGGTTCTAATGCTCGGTTCTTGTTGTTTGACAGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGGAACTAGCTAAGACTGTGAGTGACAAAACGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTATAGACGTTTTACATGCTTTTCTATGAATGATACAGGGTTTTTATGAATGGTTTCAAGATTAAGTTATGAGCTTAGATTTTCTAATGAGGTTTATAAATGAGCACGTGATTATTGAGTTTCTGAAAAATAGTTGAAACGACATTCTTTTAAGCCAAGCATGTATTAGCAAGAATTATTTAAAGATTTTCGGTTTTTTTTTCCTCGAGCAAGCTGAGTAAGCTTGAGTTTTACGAAAGATAACGATAAGCAGGCGTGTTCTAATGTTTTCATGTGATTTTATGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGACTATATGGTACCGTGTGCACACAGGTTATATTCTGTTGTTGACGTTGAGTGTACTCCATGACAACGATGCTGTTGTGAGTGCTGGGCGGGCCTCACTACGACAAAGACGATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACATTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTATTTGATATGCCTTGCTAGATTTTTAGTGACGAACCTACAATGTTTTTTTAGAAAGCTTTTATCATTGCACGTTTATGTTTAACGCCTTGGTTGAGCTGCTTTATATGTTTAAAGTTTTATCACGTGTTCTGATTTCCAAATCTACAGTTTTAAATTTAGTCACTCACTGGGCTTCATAGCTCATTCTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTAAATGTTTTGTAAGGATTGGATAATTTAGTCCTAGAGGTCGTGGTTGTATAAACCCCGGTTGTATATGTTTTTGGTTTTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGCGACACCTCGTGTATGTTGAAAGGTTTTCAAGGATTCCGCTGTGTTGTGTTTCACGTAGAATATTTTATATCTAAGATTAGTATGCTTATTAGGTTCAAACGTTCCAGGAGGGTCAACGAGTATCGTTCGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGAGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAAATGAGACATGGTAGTTAGTGCTAAGAAGAATCTAAGAAGTAAATAGTTAGACATTGAGTCAGTTCAGATAGAACTAGCGGAGTACGGTCCAAGTATTGTTGAGAGTGAGTCCAGTCAGGACTAGAATGTGGGCAGAAGTCTAGTATCATGCATCTGAGTTAAGTATCTATAGAATGTCTGATGTGTTGATATGTTATAGGAATCATGCCACCACGTACCAGCAGACGACGCAGGCAGAATCAGGACGGGACGCAGGATCCTACCCAGAGTCAATCGGAAAGGGGATCCAGTACCCCGAGAGGTCAGAATGAGGCAGGGAGTGAGCGATTTGCTAGATCTGCACAGGAGATTGGTAGGCCAGAGAGAGCAGGGCCTAGTGATCCGGAATAGATGTATGGGATTGAACGGTTGAAGAAGTTAGGAGCCATCGTGTTTGAGGGTTCCATGGATCCAGCTGACGCCGAGGTCTGGTTTAATATGCTAGAGAAATGCTTTGACGTGATGAGTTGTCCTGAGGAGCGAAAAGTCAGACTAGCCACATTTCTTTTGCAGAAGGAGGCGGAGGGATGGTGGAAATCTATTTTAGCCAGGCGCAGTGATGCACGTACGTTGGACTGGCAGACATTCAGAGGCATATTCCAGGAAAAGTACTATCCCACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGGAGCTGAAACAAGGGTCACTTTCAGTGGCCGAGTACGAGAGAAAGTATACCAAGCTTTCACTGTATGCCGATGTGATCGTGGCATCTGAGAGTGACAGGTGTCGCAGGTGATAACTGCCCAAAAGGTAGTTATTTAGGCCTCATTTCTATCATGATTTGTGTGTCTTTTGTGCTTAATAGGGTTGCTTTTAGAGAGATATTATATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAGATTATTTTGTGTAGAATATGTTGCTGAGCGACCTAAGGGAGCAAACTCTGTGCTGGAGTAAAGCTGGGAGTGAAAACTGCCACGTCACAGCTCGTTGGCCAATTTAATGAACCGAATTCTGTTGAGTTATTCTCGGGATAAAGGAGCAAGGAGAGCCATCCACGTGTCTAAGTCAACCTAATTCAAGCCTTCCTCAACTCTATAAAAGGAAGTAGCCGCCCAAGTCAAAGTCATTCCACTTTTGGGAGAAAACATTCCATTCTTGGGAAGTTCCTTCCACCTTTGGGAACCGAATAGAGGAGAGAGATTGGTGACCACCTAGAAGACCATCATTGCAAGCTGATTGAGGAGATTAGTATTTCCTTTTATTATCTTGTAATTATGGACATGCCTACTCAGATTGTAGCGTGCGTCTCCATGCATATTATGAACTAAGTAGCTTAGACGTTGGTTAGGATACATGTAATTGCCGTGCTTAATTTCTAGTAATAAATATTGATTCTATGCATCTTGATTAATTGTTGTGTTCATTTCTATTTTATGCCCGCTTGGCCAGCCGATATGAATACCTCTCTCTAGTTTCAGGGATGATTTAGAGAGTGTGTGGCGATTAATCACACTACGATCATTGTGTATTGGTGAACGCCAGTGACTGAGCTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTCGTACTTCATTGGGGTTAAAACACATTCCAAAAAATCCGGAGTTCTGGGAGGAATCCGCTAATAATACTGCGAGAGTTTGCATGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACTAAATCCTGACCAGCGCCTGTTTCTAATTTGTCTGTCTATCCGTTTACTTTCTGTTCTGTCATTTCTTTTGTTTCAGCATTATTCTTACAAAAACCAATCATTTTTACCATCTTTGAAACCATTAAAGAATTATACAAAATAGATAAAGTGGAAGCTAGTTCAGGCCTTGGATTGATAATACTTATTACTTGCTGCGGACTGTGTATACTTGCACAGAGTTCTAGAGTCCTTTTATATACTATATTTTTACTCACTCTAGGAATCCAACAGCAGGTTTGAGAGAGGGCTGCGTTTTGAGATACGTACCCTGGTTACCGCTGTTGCCAAGTGGACGGATTGTTTGGGCGAGTTTTGACGTTAGTTCAGCGTTTTTTGGACTGGTTTAACTGATTTTTGACTCGGTTCAGGCGTTCTTTGGCTGGTTCGAGCAGTTTTGGTCCGGTTTCTGAGCGGCTGAAGGCTGTTAGGATAGAATTTTGTAAAATTAATGTAATTTTCTGCTTTAATTTTATCCTAGGGGCCAATTAACCGGTTCATATGCTATTTTATATGCTTTATGAGGGGATAAAAACCCTACGCAGTGGAAAGAATTACCGAACCTACTCATAGTCTTTGATTTTTAATTGAAATACCAATACAATTTGTAAAATATTACAACAATAAATCTATATTTAATGGGTTGTACAACGACTATAAACATGCTAAATAATTAACTAGATCTAATCTAGATGATCCTAGTGATCAAGGATTTCAAAGAAAACTTACTTTTGTAGAAAGCCTTGATCGATTCGCCTTTTCTTGCTAGTAAGATCGAAAACGCAACAACCTGCTTGTGCGAACACCACCAATGGGTTACATCGGTATACCTCTAAGACTTCTTGAAGCAGGAGACTGGTGGGAGTCTTTCAGGAGAGATCTCTGA

mRNA sequence

ATGAAGAAACACCGGCTTGCCATCTACTTTCAATCGCCGACCTTCGCGCTTTCGAGCTCAACATCTTCAGATCTACTTGCGGCTTGCGATCGGAAAATCGAGAGAGAGAGGCCGTCGGATGAAGAAACATTGAGGAAGACGACTTTGGGTGGGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCGCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGGAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTAAATGTTTTGTTATTTTCCAAACCGAGTTATGTCAGGGCGACACCTCGTGTTCAAACGTTCCAGGAGGGTCAACGAGTATCGTTCGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGAGGTGTGACAACTTGGCGTTCTTTGGCTGGTTCGAGCAGTTTTGGTCCGGTTTCTGAGCGGCTGAAGGCTGTTAGGATAGAATTTTATCGAAAACGCAACAACCTGCTTGTGCGAACACCACCAATGGGTTACATCGGTATACCTCTAAGACTTCTTGAAGCAGGAGACTGGTGGGAGTCTTTCAGGAGAGATCTCTGA

Coding sequence (CDS)

ATGAAGAAACACCGGCTTGCCATCTACTTTCAATCGCCGACCTTCGCGCTTTCGAGCTCAACATCTTCAGATCTACTTGCGGCTTGCGATCGGAAAATCGAGAGAGAGAGGCCGTCGGATGAAGAAACATTGAGGAAGACGACTTTGGGTGGGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCGCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGGAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTAAATGTTTTGTTATTTTCCAAACCGAGTTATGTCAGGGCGACACCTCGTGTTCAAACGTTCCAGGAGGGTCAACGAGTATCGTTCGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGAGGTGTGACAACTTGGCGTTCTTTGGCTGGTTCGAGCAGTTTTGGTCCGGTTTCTGAGCGGCTGAAGGCTGTTAGGATAGAATTTTATCGAAAACGCAACAACCTGCTTGTGCGAACACCACCAATGGGTTACATCGGTATACCTCTAAGACTTCTTGAAGCAGGAGACTGGTGGGAGTCTTTCAGGAGAGATCTCTGA

Protein sequence

MKKHRLAIYFQSPTFALSSSTSSDLLAACDRKIERERPSDEETLRKTTLGGRKIKGSREPRICVVCVRGISGQIGWESRFHFFRPRGNRSGLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLFSKPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGGVTTWRSLAGSSSFGPVSERLKAVRIEFYRKRNNLLVRTPPMGYIGIPLRLLEAGDWWESFRRDL
Homology
[Close]
BLAST of Spg002115 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-22
Identity = 71/128 (55.47%), Postives = 80/128 (62.50%), Query Frame = 0 

Query: 85  PRGNRSGLQTRELAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVE 144
           PRGNR GLQT EL K                  VEIELP+PDTLPTSAESS S+SSTW+E
Sbjct: 303 PRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPTSAESSGSNSSTWLE 362

Query: 145 LYIESVYIVNVLLFSKPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGG 196
           LY ESV++   +LF KPS  RA   V    EG       DDV WLHAIFR K AGGPGGG
Sbjct: 363 LYFESVHV--EMLFYKPSDARAASYV--CWEGSAGIVRGDDVCWLHAIFRAKTAGGPGGG 422

[Close]
BLAST of Spg002115 vs. NCBI nr
Match: KAA0040194.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-22
Identity = 71/128 (55.47%), Postives = 80/128 (62.50%), Query Frame = 0 

Query: 85  PRGNRSGLQTRELAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVE 144
           PRGNR GLQT EL K                  VEIELP+PDTLPTSAESS S+SSTW+E
Sbjct: 303 PRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPTSAESSGSNSSTWLE 362

Query: 145 LYIESVYIVNVLLFSKPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGG 196
           LY ESV++   +LF KPS  RA   V    EG       DDV WLHAIFR K AGGPGGG
Sbjct: 363 LYFESVHV--EMLFYKPSDARAASYV--CWEGSAGIVRGDDVCWLHAIFRAKTAGGPGGG 422

[Close]
BLAST of Spg002115 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-22
Identity = 64/104 (61.54%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 85  PRGNRSGLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLFSKP 144
           PRGNR  L T +L KTVEIELPVPDTLPTSAESS+S+SSTW+ELY ESV++   +LF KP
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHV--EMLFYKP 138

Query: 145 SYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGGV 189
           S VR    V    EG       DD+ WLHA+F  K AG PGGGV
Sbjct: 139 SDVRVASYV--CWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGGV 178

[Close]
BLAST of Spg002115 vs. NCBI nr
Match: KAA0067117.1 (hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ97479.1 hypothetical protein E5676_scaffold598G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 6.4e-22
Identity = 78/167 (46.71%), Postives = 87/167 (52.10%), Query Frame = 0 

Query: 54  IKGSREPRICVVCVRGISGQIGWESRFHFFR--------------PRGNRSGLQTRELAK 113
           I+  REPRI      G          F F +              PRGNRS LQT EL K
Sbjct: 50  IRSGREPRILYCLCSGKFWTNWLRISFSFLQVLEVRISNLENLEMPRGNRSSLQTGELDK 109

Query: 114 T-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLFS 173
           T                 VEIELPVPDTLPTSAES  S+SSTW+ELY E V++   +LF 
Sbjct: 110 TVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFEFVHV--EMLFY 169

Query: 174 KPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGGVT 190
           KPS VRA   V    EG       DDV WLH +FR K+AGGPGGGVT
Sbjct: 170 KPSDVRAASYV--CWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGGVT 212

[Close]
BLAST of Spg002115 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-20
Identity = 67/140 (47.86%), Postives = 75/140 (53.57%), Query Frame = 0 

Query: 82  FFRPRGNRSGLQTRELAKTV---------------EIELPVPDTLPTSAESSRSSSSTWV 141
           +  PRGNR  LQT EL KTV                IELPVPDTLPTSAESS S+SSTW+
Sbjct: 60  YLGPRGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWL 119

Query: 142 ELYIESVYIVNVLLFSKPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGG 201
           ELY ESV++     F+    +     V     G       DDV WLHA+FR K  GGPGG
Sbjct: 120 ELYFESVHVEMFCSFTN-QVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGG 179

Query: 202 GVTTWRSLAGSSSFGPVSER 207
           GVTTW S          SER
Sbjct: 180 GVTTWESSTQRGQIEAGSER 198

[Close]
BLAST of Spg002115 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-22
Identity = 71/128 (55.47%), Postives = 80/128 (62.50%), Query Frame = 0 

Query: 85  PRGNRSGLQTRELAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVE 144
           PRGNR GLQT EL K                  VEIELP+PDTLPTSAESS S+SSTW+E
Sbjct: 303 PRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPTSAESSGSNSSTWLE 362

Query: 145 LYIESVYIVNVLLFSKPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGG 196
           LY ESV++   +LF KPS  RA   V    EG       DDV WLHAIFR K AGGPGGG
Sbjct: 363 LYFESVHV--EMLFYKPSDARAASYV--CWEGSAGIVRGDDVCWLHAIFRAKTAGGPGGG 422

[Close]
BLAST of Spg002115 vs. ExPASy TrEMBL
Match: A0A5D3DR18 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00320 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-22
Identity = 71/128 (55.47%), Postives = 80/128 (62.50%), Query Frame = 0 

Query: 85  PRGNRSGLQTRELAK-----------------TVEIELPVPDTLPTSAESSRSSSSTWVE 144
           PRGNR GLQT EL K                  VEIELP+PDTLPTSAESS S+SSTW+E
Sbjct: 303 PRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPTSAESSGSNSSTWLE 362

Query: 145 LYIESVYIVNVLLFSKPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGG 196
           LY ESV++   +LF KPS  RA   V    EG       DDV WLHAIFR K AGGPGGG
Sbjct: 363 LYFESVHV--EMLFYKPSDARAASYV--CWEGSAGIVRGDDVCWLHAIFRAKTAGGPGGG 422

[Close]
BLAST of Spg002115 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 64/104 (61.54%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 85  PRGNRSGLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLFSKP 144
           PRGNR  L T +L KTVEIELPVPDTLPTSAESS+S+SSTW+ELY ESV++   +LF KP
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHV--EMLFYKP 138

Query: 145 SYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGGV 189
           S VR    V    EG       DD+ WLHA+F  K AG PGGGV
Sbjct: 139 SDVRVASYV--CWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGGV 178

[Close]
BLAST of Spg002115 vs. ExPASy TrEMBL
Match: A0A5A7VIY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00400 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.1e-22
Identity = 78/167 (46.71%), Postives = 87/167 (52.10%), Query Frame = 0 

Query: 54  IKGSREPRICVVCVRGISGQIGWESRFHFFR--------------PRGNRSGLQTRELAK 113
           I+  REPRI      G          F F +              PRGNRS LQT EL K
Sbjct: 50  IRSGREPRILYCLCSGKFWTNWLRISFSFLQVLEVRISNLENLEMPRGNRSSLQTGELDK 109

Query: 114 T-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVYIVNVLLFS 173
           T                 VEIELPVPDTLPTSAES  S+SSTW+ELY E V++   +LF 
Sbjct: 110 TVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFEFVHV--EMLFY 169

Query: 174 KPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGGGVT 190
           KPS VRA   V    EG       DDV WLH +FR K+AGGPGGGVT
Sbjct: 170 KPSDVRAASYV--CWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGGVT 212

[Close]
BLAST of Spg002115 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20
Identity = 67/140 (47.86%), Postives = 75/140 (53.57%), Query Frame = 0 

Query: 82  FFRPRGNRSGLQTRELAKTV---------------EIELPVPDTLPTSAESSRSSSSTWV 141
           +  PRGNR  LQT EL KTV                IELPVPDTLPTSAESS S+SSTW+
Sbjct: 60  YLGPRGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWL 119

Query: 142 ELYIESVYIVNVLLFSKPSYVRATPRVQTFQEGQRVSFEEDDVRWLHAIFRTKLAGGPGG 201
           ELY ESV++     F+    +     V     G       DDV WLHA+FR K  GGPGG
Sbjct: 120 ELYFESVHVEMFCSFTN-QVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGG 179

Query: 202 GVTTWRSLAGSSSFGPVSER 207
           GVTTW S          SER
Sbjct: 180 GVTTWESSTQRGQIEAGSER 198

The following BLAST results are available for this feature:
BLAST of Spg002115 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK25935.12.2e-2255.47gag/pol protein [Cucumis melo var. makuwa][more]
KAA0040194.12.2e-2255.47gag/pol protein [Cucumis melo var. makuwa][more]
KAA0052218.13.8e-2261.54uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0067117.16.4e-2246.71hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ9747... [more]
TYK11835.12.1e-2047.86uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa][more]
BLAST of Spg002115 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg002115 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T9P71.1e-2255.47Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G000... [more]
A0A5D3DR181.1e-2255.47Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G0032... [more]
A0A5A7UAH61.8e-2261.54CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7VIY93.1e-2246.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CJX31.0e-2047.86CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of Spg002115 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002115.1Spg002115.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016740 transferase activity