Spg002094 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002094
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold2: 27534934 .. 27537881 (-)
RNA-Seq Expression	Spg002094
Synteny	Spg002094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAACTCACTGAACAGTGGCAGAATATGACGTTGACAGAGGAGGAAGCGACGACAATCCCCATGCCGTCGAATATTCCCTTGCTTGACGACTCAACCATCCAAGTTTGCGTCGTTGGAAAGGTCCTCTCGAGTCGGTTAGTGAATTCATATGTCTTTTGCAATGTGATGTTGTCGATTTGGAATGTCCATCGCTCTACTCGGATTGACCCTTTGGGTGACAACATTTTCGTTATTTGATTTTATTCAAAAGTGAGAAGCTTCGAGTAATGAGCTCTGGTCCATGGACATTTGATAAGGCGCTCTTTGTTCTTGCCTCTAGGTTCGAATAGTCCTTCTCTTCTTGATTATTCTCAATCTGCATTTTGGGTCCAGATAAACAATGTCCCATTGAATTTTCTTACTCCTGCTATGGCCCATGAACTTGGCAGTGTGCTTGGTACCGTTGAGGAAGTGTTTGGGGAAGGTTGTGGGGACTGGATAGGTTCAGTTATTCGAATTCGAGTTATTCTTGATGTGACTAAGCCCCTTCGTCGTGTAGTCCGTTAGCAGGTTAGCAATGAAATTTTTTTTGTTGTGCCTAATTAAGTATGAACGGTTGCCAGATTTCTGTTATAGGTGTGGTTGTATTGGACACTCTCATTGTGAATGTTTTGAATTGGGTTCCAGTACTGCTGCAAATGGTCTCTTCTCATATGGTGATTGGCTTCGTGTTGCTCCTTTTAGACGTATGAGACTGAATGGGTCAGGGGAAGATGGCCAGGGTCTTGATAGTCATAGAGGGCGAGAACATGGTGGGCTTGGTAGAGGCAGGAGGCGGGGTCGTGGTCGAATGGGTCTCTACAAGACGAGTGAGGATTTGGGCAGTGATTTAGTTCAAACTTTTATGGTTGCACTTGTTGTGAATTCTCTGCCTTCTGCCACAACCATCCCCCCTCTTGATAAAGGGAAGACAATGGTTGGGGAGGTCTCTTCAACGCTTGTGAAAGAGGATGGCTCAAGTTCTGGTAAGAAAGGTTGGAAGAGATGGGCCAAGGGGACTTTGAAAGATGTTACAAATGTGATCTTTGTACCTTCATCTCCCAAGCACAATTGTCTTGTCGAGATGGATGCTCTTCCAACCAACGAGGGGGAAGCGAAACAATTGAAGCTTATGGAAATGGATGATATGTTGAATGTGTTTGTTGATCATAATTTGGCGGTGTCTGGTTGCCAGCCCTGCCGAGGATTATGAGTCTGATATTTTGGAACGCTCGAGATTTGGGGTCCCCTCGGGCTCTCCGACGCTTGACTAAGTTGGTTCAAGCAAAATGACCATTGGTGCTATTCTTATCTGAAACAAAGGTTTCTTCAAGCAGGATGGATTCTGTGAAACGAATTATGGGCTATGATTAATGTTTTAGTGTTGATTGTATTTGTCGAAGTAGTGGTTTGGCTCTTCTTTGGGACTCTATTATTTCCTTTAGCCTCTTATCTTTCTCAAGCAATCATATAGATGGTTAAGTGTTATAGAATGATTGCAGATGACACCTTTCTGGGATTTATGGTTTCCTAACTGTTGAATTGCGTCCTCGGACATGGTCCTTTCTCATTAAGTTGCGGGGTTATTGGAGGGGATTTTACTTGAAGGAGTGTACAACACTCTAGCAGAAGCGGTTTGGATCGAAAGCACATCAATTCTATTAAATTTATAATCAAAAGCATGCTGAAAAACTAAATGAAAACAGGGCAGCATTTTAACCAACCTTTGGTGCCGAAATTGAACTACTCCGTTGATGAATTCTAAACTCGATTGATGTGTGGACAACCACCGAAGCCTCCCCCGCTATCCTCCAGCCTTAGAACGAGTTGTGGGACTCAATCTTGGGATGAATTTTTAAAGAAAAATACTAGGGGTTTGAGAGAGTTTCTTCTCTTGTGATTTTGAGAGCTCAGAATGTTTAGCACCACCCCTTCATCTTCTCTAGAAATTCAAGCTTTTAAGCAACCAAAACATGCAATCCAATACCTCACAAGATGACAACAAAATTGGAGATGGATTAGTCATTTGGTTTGGTGGCAACTCATGGGAATTTGCCTCTTGAGTTATTAAAAGAAAAAATTGAAATTACAAATTAATCTCTCAAATTTCATTTAATTAACTTTAAAATAAAATTAATTCAAATAACTAATTTTAAATAAAATTAATTTTAATTTTAAATAAATAATTATTTAAAAATTTTAATTAATTATTTAATTTATTTAATTTAATATCAAATATTAAATAGTTCCACCAATCCTGACTTCTCTAAAAAAAAACTCAGTCTCTTGAACATGAATCTCTGTTCATGTGTATAATATTTAAATCATATTTTAATATATCCAACTCTCTCTAATATATTTTAATTTACAACTAAACTATAACGTGTTAAGTATATCGTATATAATTAACTCCCTTTATTGAATTTGAACGATTTCAAATTCTCTCATCACACTGTTCTAAGGTTTAGTCTGTATGAGCTAGCAGGGGGATCTAATGAACCTAGACGAACAAAAGACGGGTTTGACCCTAAAACATACAAACTATTGGCAAAGGTAGGCTATGATTTCATGACCCATATTGAGTTTAAAAGTTTATGGATCTTTGATCAAAGGCCTGAATTTTCATCAACACGGAAGAAACTTCAAAAAGAAGGTTATGTTATACACGTCTCAAGGGTTGACTTGGATATAAGTCTCCTGAGCCAATTCAAATCACAAGAAAAGAGAAAGCAAAAGTTGCAGATTCGTTTCACATTACGGTGGAAGAAATTGATGATCCCGAAGAAGGTAAAGAAAGCGAAGATCACCGGACTTCTGCTTTCGATCGCATTGGATCGTCTGTTACACGGTCTTCGGTTTGTCAAAGGTTGAGTACAATTGCAGTAGAGGGTGAAAGTCAGCATCCAGCTTCTGGCTCCCCGTGA

mRNA sequence

ATGGATGAACTCACTGAACAGTGGCAGAATATGACGTTGACAGAGGAGGAAGCGACGACAATCCCCATGCCGTCGAATATTCCCTTGCTTGACGACTCAACCATCCAAGTTTGCGTCGTTGGAAAGGTCCTCTCGAGTCGGTTAGTGAATTCATATGTCTTTTGCAATGTGATGTTGTCGATTTGGAATGTCCATCGCTCTACTCGGATTGACCCTTTGGGTGACAACATTTTCATAAACAATGTCCCATTGAATTTTCTTACTCCTGCTATGGCCCATGAACTTGGCAGTGTGCTTGGTACCGTTGAGGAAGTGTTTGGGGAAGATTTCTGTTATAGGTGTGGTTGTATTGGACACTCTCATTGTGAATGTTTTGAATTGGGTTCCAGTACTGCTGCAAATGGTCTCTTCTCATATGGTGATTGGCTTCGTGTTGCTCCTTTTAGACGTATGAGACTGAATGGGTCAGGGGAAGATGGCCAGGGTCTTGATAGTCATAGAGGGCGAGAACATGGTGGGCTTGGTAGAGGCAGGAGGCGGGGTCGTGGTCGAATGGGTCTCTACAAGACGAGTGAGGATTTGGGCAGTGATTTAGTTCAAACTTTTATGGTTGCACTTGTTGTGAATTCTCTGCCTTCTGCCACAACCATCCCCCCTCTTGATAAAGGGAAGACAATGGTTGGGGAGGTCTCTTCAACGCTTGTGAAAGAGGATGGCTCAAGTTCTGGTAAGAAAGGTTGGAAGAGATGGGCCAAGGGGACTTTGAAAGATGTTACAAATGTGATCTTTGTACCTTCATCTCCCAAGCACAATTGTCTTGTCGAGATGGATGCTCTTCCAACCAACGAGGGGGAAGCGAAACAATTGAAGCTTATGGAAATGGATGATATGTTTAGTCTGTATGAGCTAGCAGGGGGATCTAATGAACCTAGACGAACAAAAGACGGGTTTGACCCTAAAACATACAAACTATTGGCAAAGTCTCCTGAGCCAATTCAAATCACAAGAAAAGAGAAAGCAAAAGTTGCAGATTCGTTTCACATTACGGTGGAAGAAATTGATGATCCCGAAGAAGGTAAAGAAAGCGAAGATCACCGGACTTCTGCTTTCGATCGCATTGGATCGTCTGTTACACGGTCTTCGGTTTGTCAAAGGTTGAGTACAATTGCAGTAGAGGGTGAAAGTCAGCATCCAGCTTCTGGCTCCCCGTGA

Coding sequence (CDS)

ATGGATGAACTCACTGAACAGTGGCAGAATATGACGTTGACAGAGGAGGAAGCGACGACAATCCCCATGCCGTCGAATATTCCCTTGCTTGACGACTCAACCATCCAAGTTTGCGTCGTTGGAAAGGTCCTCTCGAGTCGGTTAGTGAATTCATATGTCTTTTGCAATGTGATGTTGTCGATTTGGAATGTCCATCGCTCTACTCGGATTGACCCTTTGGGTGACAACATTTTCATAAACAATGTCCCATTGAATTTTCTTACTCCTGCTATGGCCCATGAACTTGGCAGTGTGCTTGGTACCGTTGAGGAAGTGTTTGGGGAAGATTTCTGTTATAGGTGTGGTTGTATTGGACACTCTCATTGTGAATGTTTTGAATTGGGTTCCAGTACTGCTGCAAATGGTCTCTTCTCATATGGTGATTGGCTTCGTGTTGCTCCTTTTAGACGTATGAGACTGAATGGGTCAGGGGAAGATGGCCAGGGTCTTGATAGTCATAGAGGGCGAGAACATGGTGGGCTTGGTAGAGGCAGGAGGCGGGGTCGTGGTCGAATGGGTCTCTACAAGACGAGTGAGGATTTGGGCAGTGATTTAGTTCAAACTTTTATGGTTGCACTTGTTGTGAATTCTCTGCCTTCTGCCACAACCATCCCCCCTCTTGATAAAGGGAAGACAATGGTTGGGGAGGTCTCTTCAACGCTTGTGAAAGAGGATGGCTCAAGTTCTGGTAAGAAAGGTTGGAAGAGATGGGCCAAGGGGACTTTGAAAGATGTTACAAATGTGATCTTTGTACCTTCATCTCCCAAGCACAATTGTCTTGTCGAGATGGATGCTCTTCCAACCAACGAGGGGGAAGCGAAACAATTGAAGCTTATGGAAATGGATGATATGTTTAGTCTGTATGAGCTAGCAGGGGGATCTAATGAACCTAGACGAACAAAAGACGGGTTTGACCCTAAAACATACAAACTATTGGCAAAGTCTCCTGAGCCAATTCAAATCACAAGAAAAGAGAAAGCAAAAGTTGCAGATTCGTTTCACATTACGGTGGAAGAAATTGATGATCCCGAAGAAGGTAAAGAAAGCGAAGATCACCGGACTTCTGCTTTCGATCGCATTGGATCGTCTGTTACACGGTCTTCGGTTTGTCAAAGGTTGAGTACAATTGCAGTAGAGGGTGAAAGTCAGCATCCAGCTTCTGGCTCCCCGTGA

Protein sequence

MDELTEQWQNMTLTEEEATTIPMPSNIPLLDDSTIQVCVVGKVLSSRLVNSYVFCNVMLSIWNVHRSTRIDPLGDNIFINNVPLNFLTPAMAHELGSVLGTVEEVFGEDFCYRCGCIGHSHCECFELGSSTAANGLFSYGDWLRVAPFRRMRLNGSGEDGQGLDSHRGREHGGLGRGRRRGRGRMGLYKTSEDLGSDLVQTFMVALVVNSLPSATTIPPLDKGKTMVGEVSSTLVKEDGSSSGKKGWKRWAKGTLKDVTNVIFVPSSPKHNCLVEMDALPTNEGEAKQLKLMEMDDMFSLYELAGGSNEPRRTKDGFDPKTYKLLAKSPEPIQITRKEKAKVADSFHITVEEIDDPEEGKESEDHRTSAFDRIGSSVTRSSVCQRLSTIAVEGESQHPASGSP

Homology

[Close]

BLAST of Spg002094 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-13
Identity = 72/283 (25.44%), Postives = 107/283 (37.81%), Query Frame = 0


Query: 1   MDELTEQWQNMTLTEEEATTIPMPSNIPLLDDSTIQVCVVGKVLSSRLVNSYVFCNVMLS 60
           MDE+T+ W++   T +E  T+ +    P+L    +++CVV K+ +S+ +++    +VM S
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  IWNVHRSTRIDPLGDNIF------------------------------------------ 120
           +W VH STR +PLG NI+                                          
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 --------INNVPLNFLTPAMAHELGSVLGTVEEVFGE---------------------- 180
                   I+N+P   ++  MA+ LG+ LG VEE+ G+                      
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

[Close]

BLAST of Spg002094 vs. NCBI nr
Match: KAA0025355.1 (uncharacterized protein E6C27_scaffold1204G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-12
Identity = 71/193 (36.79%), Postives = 98/193 (50.78%), Query Frame = 0


Query: 218 PPLDKGKTMVGEVSS-TLVKEDGSSSGKKGWKRWAKGTLKDVTNVIFVPSSPKHNCLVEM 277
           P  +K  T+  EVS+ T+++    S  KKG   +A+ + K++T             L E 
Sbjct: 486 PEAEKIATLQKEVSNPTVLRYIPLSRRKKGESPFAECS-KNLT-------VKNTEILKEN 545

Query: 278 DALPTNEGEAKQLKLMEMDDMFSLYELAGGSNEPRRTKDGFDPKTYKLLAK--------- 337
            A P  + E  + K +E  D+ +           RRT +GFDPK YKL+AK         
Sbjct: 546 FAAPLTKIEKGEAKKIEKKDLEAYL-------PERRTVEGFDPKAYKLMAKAGYDFTTRT 605

Query: 338 ----SPEPIQITRKEKAKVADSFHITVEEIDDPEEGKESEDHRTSAFDRIGSSVTRSSVC 397
               S EP+QIT K K KVA++ HITVEE  D +EGK+    R+S FDRI  S  R SV 
Sbjct: 606 ELKSSSEPVQITGKGKTKVANTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVF 663

[Close]

BLAST of Spg002094 vs. NCBI nr
Match: KAA0054152.1 (uncharacterized protein E6C27_scaffold131G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-11
Identity = 57/137 (41.61%), Postives = 65/137 (47.45%), Query Frame = 0


Query: 302 ELAGGSNEPRRTKDGFDPKTYKLLA----------------------------------- 361
           +L   S   RRTKDGFDPK YKL+A                                   
Sbjct: 231 DLTEASLPQRRTKDGFDPKAYKLMAKAGYDFITHTEFKILKIHEQPKLSSTQKKLLQEGH 290

Query: 362 -----------KSPEPIQITRKEKAKVADSFHITVEEIDDPEEGKESEDHRTSAFDRIGS 393
                      KSPEPI+ITRK K KV DS HITV+E+D  EE KE +  RTSAFDRI  
Sbjct: 291 AIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEE-KEDDSQRTSAFDRISP 350

[Close]

BLAST of Spg002094 vs. NCBI nr
Match: KAA0031753.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-11
Identity = 49/99 (49.49%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 311 RRTKDGFDPKTYKLLAK-------------SPEPIQITRKEKAKVADSFHITVEEIDDPE 370
           RRT +GFDPK YKL+AK             S E ++IT K KAKVA++ HITVEE  D E
Sbjct: 368 RRTVEGFDPKAYKLMAKAGYDFTTRTELKSSSEQVRITGKGKAKVANTCHITVEESKDSE 427

Query: 371 EGKESEDHRTSAFDRIGSSVTRSSVCQRLSTIAVEGESQ 397
           EGK+    R+S FDRI  S  R SV QR+ST   +  +Q
Sbjct: 428 EGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 466

[Close]

BLAST of Spg002094 vs. NCBI nr
Match: TYK28162.1 (uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-10
Identity = 56/145 (38.62%), Postives = 66/145 (45.52%), Query Frame = 0


Query: 302 ELAGGSNEPRRTKDGFDPKTYKLLA----------------------------------- 361
           +L   S   RRTKDGFDPK YKL+A                                   
Sbjct: 216 DLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLLREGH 275

Query: 362 -----------KSPEPIQITRKEKAKVADSFHITVEEIDDPEEGKESEDHRTSAFDRIGS 401
                      KSPEPI+ITRK K KV DS HITV+E+D  EE KE ++ RTS FDRI  
Sbjct: 276 VIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEE-KEGDNQRTSTFDRISP 335

[Close]

BLAST of Spg002094 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.5e-13
Identity = 72/283 (25.44%), Postives = 107/283 (37.81%), Query Frame = 0


Query: 1   MDELTEQWQNMTLTEEEATTIPMPSNIPLLDDSTIQVCVVGKVLSSRLVNSYVFCNVMLS 60
           MDE+T+ W++   T +E  T+ +    P+L    +++CVV K+ +S+ +++    +VM S
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  IWNVHRSTRIDPLGDNIF------------------------------------------ 120
           +W VH STR +PLG NI+                                          
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 --------INNVPLNFLTPAMAHELGSVLGTVEEVFGE---------------------- 180
                   I+N+P   ++  MA+ LG+ LG VEE+ G+                      
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

[Close]

BLAST of Spg002094 vs. ExPASy TrEMBL
Match: A0A5A7SLL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00390 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-12
Identity = 71/193 (36.79%), Postives = 98/193 (50.78%), Query Frame = 0


Query: 218 PPLDKGKTMVGEVSS-TLVKEDGSSSGKKGWKRWAKGTLKDVTNVIFVPSSPKHNCLVEM 277
           P  +K  T+  EVS+ T+++    S  KKG   +A+ + K++T             L E 
Sbjct: 486 PEAEKIATLQKEVSNPTVLRYIPLSRRKKGESPFAECS-KNLT-------VKNTEILKEN 545

Query: 278 DALPTNEGEAKQLKLMEMDDMFSLYELAGGSNEPRRTKDGFDPKTYKLLAK--------- 337
            A P  + E  + K +E  D+ +           RRT +GFDPK YKL+AK         
Sbjct: 546 FAAPLTKIEKGEAKKIEKKDLEAYL-------PERRTVEGFDPKAYKLMAKAGYDFTTRT 605

Query: 338 ----SPEPIQITRKEKAKVADSFHITVEEIDDPEEGKESEDHRTSAFDRIGSSVTRSSVC 397
               S EP+QIT K K KVA++ HITVEE  D +EGK+    R+S FDRI  S  R SV 
Sbjct: 606 ELKSSSEPVQITGKGKTKVANTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRPSVF 663

[Close]

BLAST of Spg002094 vs. ExPASy TrEMBL
Match: A0A5A7SND9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00160 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-11
Identity = 49/99 (49.49%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 311 RRTKDGFDPKTYKLLAK-------------SPEPIQITRKEKAKVADSFHITVEEIDDPE 370
           RRT +GFDPK YKL+AK             S E ++IT K KAKVA++ HITVEE  D E
Sbjct: 368 RRTVEGFDPKAYKLMAKAGYDFTTRTELKSSSEQVRITGKGKAKVANTCHITVEESKDSE 427

Query: 371 EGKESEDHRTSAFDRIGSSVTRSSVCQRLSTIAVEGESQ 397
           EGK+    R+S FDRI  S  R SV QR+ST   +  +Q
Sbjct: 428 EGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 466

[Close]

BLAST of Spg002094 vs. ExPASy TrEMBL
Match: A0A5A7UEC9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00760 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-11
Identity = 57/137 (41.61%), Postives = 65/137 (47.45%), Query Frame = 0


Query: 302 ELAGGSNEPRRTKDGFDPKTYKLLA----------------------------------- 361
           +L   S   RRTKDGFDPK YKL+A                                   
Sbjct: 231 DLTEASLPQRRTKDGFDPKAYKLMAKAGYDFITHTEFKILKIHEQPKLSSTQKKLLQEGH 290

Query: 362 -----------KSPEPIQITRKEKAKVADSFHITVEEIDDPEEGKESEDHRTSAFDRIGS 393
                      KSPEPI+ITRK K KV DS HITV+E+D  EE KE +  RTSAFDRI  
Sbjct: 291 AIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEE-KEDDSQRTSAFDRISP 350

[Close]

BLAST of Spg002094 vs. ExPASy TrEMBL
Match: A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10
Identity = 56/145 (38.62%), Postives = 66/145 (45.52%), Query Frame = 0


Query: 302 ELAGGSNEPRRTKDGFDPKTYKLLA----------------------------------- 361
           +L   S   RRTKDGFDPK YKL+A                                   
Sbjct: 216 DLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLLREGH 275

Query: 362 -----------KSPEPIQITRKEKAKVADSFHITVEEIDDPEEGKESEDHRTSAFDRIGS 401
                      KSPEPI+ITRK K KV DS HITV+E+D  EE KE ++ RTS FDRI  
Sbjct: 276 VIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEE-KEGDNQRTSTFDRISP 335

The following BLAST results are available for this feature:

BLAST of Spg002094 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149484.1	5.1e-13	25.44	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
KAA0025355.1	3.3e-12	36.79	uncharacterized protein E6C27_scaffold1204G00390 [Cucumis melo var. makuwa]	[more]
KAA0054152.1	2.2e-11	41.61	uncharacterized protein E6C27_scaffold131G00760 [Cucumis melo var. makuwa]	[more]
KAA0031753.1	2.2e-11	49.49	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
TYK28162.1	2.4e-10	38.62	uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]	[more]

BLAST of Spg002094 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg002094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D765	2.5e-13	25.44	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7SLL7	1.6e-12	36.79	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G0039...	[more]
A0A5A7SND9	1.0e-11	49.49	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7UEC9	1.0e-11	41.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DXC7	1.2e-10	38.62	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Spg002094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..370
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002094.1	Spg002094.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process