Spg002058 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002058
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 27679633 .. 27680736 (-)
RNA-Seq Expression	Spg002058
Synteny	Spg002058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGAGACACGAAGATAGGGGCAAAGGAGTCGCAGGAGCAGGCTGAAGCAGAGGAGGCAGAGCCTGAGGAACAGTGGTTGTCGTATGAATGCTTCGCCAATAACCTTGCTAGGGCAAAATACCTGGATATGCTGAAGCGATATTTTCTGTTCGAGTGAGGGTTTGGTGACAATCTACCGCACTTTTTGAGAGCCGGCATCACAAACCATGGTTGGGAGCAGTTTTGCGCCAAGCCAGGGCCCGCGAACTTGCAGGTAGTATGCGAGTTCTACGCGAACATCGACGAGGAGGAAGGATTCCAAGTGATCGTTCGTGGGGTGGCTGTTGACTGGAGTCCCGGGGCTATAAACTCACTATTCAATCTTTAAGATTTCCCCCATGTTAGGTACAATGAGATGACAGCAACACCATCTAATGAGCAGTTGAATGCGACTGTTCTAGAAGTGGGAATTGAGGAGGCACAGTTGCGACTCTTGAAGACTGAGAAGAGGACCTTCCAGGCTGCCTATCTGAAGAGCGAATCGAATACTTGGATGGGAATTATCAAGCAAGGGCTGCTTCCTACAACTCACGATTCCACAGTTTCCTGGGACAGAGTTCTTCTAGTTTTTTCGATTTTAAGATCTTTGAGTATTAACGTCGGCAAGATCATCTCCAGCGAGATTCATAGTTGCTGGAGGAAGAAAGTGAGAAAATTGTTTTTTCCTAACACGATCACTATGTTATGCCAAAGGGAAGGGTTTCCCACAAGCGCTGAGGATATAATATTAATGAACAAATGGATTATGGACACACCAAACTTGGCAAGGCTGTAGAGGATGCAGGAAGCTCGCCAAGGTGGACTGGTGTGCAACATCCACAATATCCAAGAACAGCTTCAACTGCATTCCAGCCGAATGGAATTTGTCGAGAGGCAATTCCAGACGTATTGGAATTATGTTAAAAGGAGGGATGCCACACTTAGGAGGGCTCTGCAATCAAATTTTTCCAAGCCATATCAAGCCTTCCCCGTTTTCCTTGATGATCTGTTGAACCCCTGGATCCCACCGTCGCCGATAAAAAGAGAAGAAGAAGAAGATGAGGCTAGTCAGAAAGATTAG

mRNA sequence

ATGAGAAGAGACACGAAGATAGGGGCAAAGGAGTCGCAGGAGCAGGCTGAAGCAGAGGAGGCAGAGCCTGAGGAACAGTGGTTGTCGTATGAATGCTTCGCCAATAACCTTGCTAGGGCAAAATACCTGGATATGCTGAAGCGATATTTTCTGTTCGAGTACAATGAGATGACAGCAACACCATCTAATGAGCAGTTGAATGCGACTGTTCTAGAAGTGGGAATTGAGGAGGCACAGTTGCGACTCTTGAAGACTGAGAAGAGGACCTTCCAGGCTGCCTATCTGAAGAGCGAATCGAATACTTGGATGGGAATTATCAAGCAAGGGCTGCTTCCTACAACTCACGATTCCACAAGGATGCAGGAAGCTCGCCAAGGTGGACTGGTGTGCAACATCCACAATATCCAAGAACAGCTTCAACTGCATTCCAGCCGAATGGAATTTGTCGAGAGGCAATTCCAGACGTATTGGAATTATGTTAAAAGGAGGGATGCCACACTTAGGAGGGCTCTGCAATCAAATTTTTCCAAGCCATATCAAGCCTTCCCCGTTTTCCTTGATGATCTGTTGAACCCCTGGATCCCACCGTCGCCGATAAAAAGAGAAGAAGAAGAAGATGAGGCTAGTCAGAAAGATTAG

Coding sequence (CDS)

ATGAGAAGAGACACGAAGATAGGGGCAAAGGAGTCGCAGGAGCAGGCTGAAGCAGAGGAGGCAGAGCCTGAGGAACAGTGGTTGTCGTATGAATGCTTCGCCAATAACCTTGCTAGGGCAAAATACCTGGATATGCTGAAGCGATATTTTCTGTTCGAGTACAATGAGATGACAGCAACACCATCTAATGAGCAGTTGAATGCGACTGTTCTAGAAGTGGGAATTGAGGAGGCACAGTTGCGACTCTTGAAGACTGAGAAGAGGACCTTCCAGGCTGCCTATCTGAAGAGCGAATCGAATACTTGGATGGGAATTATCAAGCAAGGGCTGCTTCCTACAACTCACGATTCCACAAGGATGCAGGAAGCTCGCCAAGGTGGACTGGTGTGCAACATCCACAATATCCAAGAACAGCTTCAACTGCATTCCAGCCGAATGGAATTTGTCGAGAGGCAATTCCAGACGTATTGGAATTATGTTAAAAGGAGGGATGCCACACTTAGGAGGGCTCTGCAATCAAATTTTTCCAAGCCATATCAAGCCTTCCCCGTTTTCCTTGATGATCTGTTGAACCCCTGGATCCCACCGTCGCCGATAAAAAGAGAAGAAGAAGAAGATGAGGCTAGTCAGAAAGATTAG

Protein sequence

MRRDTKIGAKESQEQAEAEEAEPEEQWLSYECFANNLARAKYLDMLKRYFLFEYNEMTATPSNEQLNATVLEVGIEEAQLRLLKTEKRTFQAAYLKSESNTWMGIIKQGLLPTTHDSTRMQEARQGGLVCNIHNIQEQLQLHSSRMEFVERQFQTYWNYVKRRDATLRRALQSNFSKPYQAFPVFLDDLLNPWIPPSPIKREEEEDEASQKD

Homology

The following BLAST results are available for this feature:

BLAST of Spg002058 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002058 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002058 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002058 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002058.1	Spg002058.1	mRNA