
Spg002020 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGGCCTCATCCCGAGGCCGAGGCCGACCATTCAGCCCGTGTTTCCGCCTCCATTCGGTCCCTGGTGCCCTCGGTCACCTCGGTTCCGCTCAGTTCAACCCCGGATCACCTCCGAACTCCTCGAAACCCTAGAGCAGGAACAGGTATTTAAACTCCTATTCGTCACTGAAGAAGGGATCCGAAATTCATTCTCTGAACTCTCTACTTCTTCTCTTGCTCTTCCATTAGTTTTCTGACTTAAGCATTGGAGTTGGTGTGGCAAGCACAACACCGGTGTGCAGTGTTTGCTTGTCTTACAGGTCACGTCTTCCCCCTCTCATACAAATTTACTGTTGGTGGCACGTGAAGGTCGGGTGAGTCTCCTGTTCGGATTTTGGCATCAACATCTAAGATATCAAAACCATGGTGTGAGGTGGAGGCCTTGGTGGAAGACATTTGGTCGTTGTTGCCTTTTTTTCACTAAAGTTAATTTTTCTTATATTTCTAGGAAGAAAAATAGTGAGGCAGATGATATGCTAAGAAAGCTAGATTGTTAGGTTTGAATAAGACCTGGGTAATTTCTATCCTGAGTTGTATTGTTTCATTCATCGTTTCTAACCGCTCTTCTTCTGCCCTTGTGGCGTTATAATATTTTTCTTTCTTCTAAAAAAAAAGAGTAATTCTGTCATATAAAAAAAATATATCAATATTAAAAAATCACAAATAACCATATTTATAATTTCATATTCGTTCGTACGTTTATCAAAATCTACCATAGCCCTTCCTATAAAATCCAAATAGCCTTTGTTAACATATCAACCCAATCCTAGTTGTCAAAGTGACCATAGCTCAGCGATAATTGACATGCACTCTTGACCAACAAATTTGAATTCTGAATTTCCTGAGAAGTTAGAGAGTGAGAGCCAACCTAAAATTTCTTCTCCAATTTCGATTTGAAATCCAAATTGACCAAAAAAAAATGCTAATTCACTCACACAACACAACTTCTCCTACTCTCTTCTCCTACGTTTTTCGTCTTTCTTGGTTGAATTCCATCGTTTTTCTGTAGAAATGAGTAAATATGGTGAGCACTACTGTTGCTCGAAATATCGTTGGCATTATCTGTAATTTCTCATTTTCAATATTAAGAAATTTGTTTTATGATCACTTAATCATAATTTGCTCTCTAAATCCTATATTTTAAATATATGTGTTGCAGGTAACGTCATCTCCTTTGGCCTTTTTTTCTCCCCACTGTTAAGCTTTCTTTTACAAATTTTTTTTTTCATCCTCGATCCAATGTTGTTTTCAATCATTTTTAAGTATTTATGTAATGCAATGCAATGCAGGCCAACGTTTTATAAAAACATTAAGAACAAGTCTGTGGAGGAGTTCAAGTGTGATCTTTATATTGCAACTGTTCTCAATTGCATGTTTTTGGTCTTCTATGGAAGGCCCTTTGTTCATCCCGATAGCGTTTTGGTCGTCGCCATTAATGGCATTGGCCTTGTTACTGAACTTGTTTATTTGACCATCTTCGTCTTCTTTGTTGACAACAAAGGATGGGTAAGCTTTCCTTTTTCTTTTCTTCTAAAATTTGTTGGAAAAATCAATATTCTATTATTTTGAAAACAAGCTCAAATTTCTCATATGAATTGTTCGTGTATGATTTTCTCTTATTTTAGAAGAAAGTGGGTGTTTGCCTCTTGATTGAAGTGATATTTGTGGCCGTCATTGTTGTGATAACAATGCCAATTTTGCATGGACCCAAAAATAGATCATTGACGGTCGGAATAATTTTTGACATCTTCAACGTCATGACGTATATTTCTCCTCTTAACCATCATGGTAAGTAAATTATTCGAATCAACTTCATGATCAAATTTTTCTTTTTGTATGTATACGTATAAACATTAAAATTTATTGTTTAATTTGAACAGAAAATGGTGATCACATTGAAGAGTGTCAAGTATATGTCATTTACTCTTTCATTGACCAACTTCCTCAACTATTGCATTTGGACAGCTTAGGCCCTCATCAAATTCGATCTCTATATGTTGGTACGTACTCTTTCCATTTCTATTACAAATTTGAAGTTTGATATTTTTATGTAGTGGCGGATCCATAACTTTAGCATAGGGGGCACAAATTCATACAAGGTTAAATTACAAGTTCAATTCATGAACTTTCAAATTTGTGTCTATATGATCTCTAAACTTTTAAAAGTTTCTAATAGGTCCTTGAATTTTTGATAGGTTCTATTGAACATTTTTTTAAAAAAAATAAATGTAGCTATTAGTTGCAAAATTGAAAGTTTAAGGTTCAATTAGAGACGAAATTAAATTTTATACCTAACATAACAATTAATATCTATATACAGAATTGAAATTTTATGGATATATTAGACATTTTTAGAGGATTTATTTATTTCAAAATTAACAGTTTAGACGACTTATTAGACAAAAATTTACAAATTCAGAAACTAAACTTGTGAATTAACTATAGTATTTAAATTAAGTAATATTAACTACAAATTTATAATAAACAATTATAGAAATATTTATCTAAATATATAATATATAATTAAAGAAGAGACTTCAAATAGAATTAAGTTGTATATTCATATGTGTGTACTTGTGTGATTTTTTTTTAAAAAAATAAATTCTAACTAAGTGCACTAAAAATATATATATAAATTAAGATATATAATATCTATGTGTGAGTGTTGTAAAATTAAAGAAAATGAAAATGGAAACACGGTAAAATAATATTATTTTATTAAAATAGCTGCAAAATAAATTAAATAAACTAAGTGCAATTTCATGTCCCCTGACCATTGAACCAAAAGACCTAGTATGTTAAATTTTATGGATCATAATATAGAAATATATTAAACATAAAATTTGAGGGGCACGTGTCCCTCTTGGCTCCAACGTGGATCCGCCTCTATTTCTATGGACGTTTATCACTTCATTATAAATATTGCAGATTAGCAATGGTGTTGAGACAATTTCAGGATTTGTCCAACTAATATTGTATGCATATTACTCAGTGATGGATTCAAAAGAGGATGAAACTAAAGAAAAGGAAGCTACTACCATTCAGCTCTCCCACTTAAAAGCACCATCCCAAGTCTAA ATGTTCGGCCTCATCCCGAGGCCGAGGCCGACCATTCAGCCCGTGTTTCCGCCTCCATTCGGTCCCTGGTGCCCTCGGTCACCTCGGTTCCGCTCAGTTCAACCCCGGATCACCTCCGAACTCCTCGAAACCCTAGAGCAGGAACAGTTTTCTGACTTAAGCATTGGAGTTGGTGTGGCAAGCACAACACCGGTGTGCAGTGTTTGCTTGTCTTACAGGTCACGTCTTCCCCCTCTCATACAAATTTACTGTTGGTGGCACGTGAAGGTCGGGCCAACGTTTTATAAAAACATTAAGAACAAGTCTGTGGAGGAGTTCAAGTGTGATCTTTATATTGCAACTGTTCTCAATTGCATGTTTTTGGTCTTCTATGGAAGGCCCTTTGTTCATCCCGATAGCGTTTTGGTCGTCGCCATTAATGGCATTGGCCTTGTTACTGAACTTGTTTATTTGACCATCTTCGTCTTCTTTGTTGACAACAAAGGATGGATTAGCAATGGTGTTGAGACAATTTCAGGATTTGTCCAACTAATATTGTATGCATATTACTCAGTGATGGATTCAAAAGAGGATGAAACTAAAGAAAAGGAAGCTACTACCATTCAGCTCTCCCACTTAAAAGCACCATCCCAAGTCTAA ATGTTCGGCCTCATCCCGAGGCCGAGGCCGACCATTCAGCCCGTGTTTCCGCCTCCATTCGGTCCCTGGTGCCCTCGGTCACCTCGGTTCCGCTCAGTTCAACCCCGGATCACCTCCGAACTCCTCGAAACCCTAGAGCAGGAACAGTTTTCTGACTTAAGCATTGGAGTTGGTGTGGCAAGCACAACACCGGTGTGCAGTGTTTGCTTGTCTTACAGGTCACGTCTTCCCCCTCTCATACAAATTTACTGTTGGTGGCACGTGAAGGTCGGGCCAACGTTTTATAAAAACATTAAGAACAAGTCTGTGGAGGAGTTCAAGTGTGATCTTTATATTGCAACTGTTCTCAATTGCATGTTTTTGGTCTTCTATGGAAGGCCCTTTGTTCATCCCGATAGCGTTTTGGTCGTCGCCATTAATGGCATTGGCCTTGTTACTGAACTTGTTTATTTGACCATCTTCGTCTTCTTTGTTGACAACAAAGGATGGATTAGCAATGGTGTTGAGACAATTTCAGGATTTGTCCAACTAATATTGTATGCATATTACTCAGTGATGGATTCAAAAGAGGATGAAACTAAAGAAAAGGAAGCTACTACCATTCAGCTCTCCCACTTAAAAGCACCATCCCAAGTCTAA MFGLIPRPRPTIQPVFPPPFGPWCPRSPRFRSVQPRITSELLETLEQEQFSDLSIGVGVASTTPVCSVCLSYRSRLPPLIQIYCWWHVKVGPTFYKNIKNKSVEEFKCDLYIATVLNCMFLVFYGRPFVHPDSVLVVAINGIGLVTELVYLTIFVFFVDNKGWISNGVETISGFVQLILYAYYSVMDSKEDETKEKEATTIQLSHLKAPSQV Homology
BLAST of Spg002020 vs. NCBI nr
Match: XP_022159273.1 (bidirectional sugar transporter SWEET5-like [Momordica charantia]) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-26 Identity = 88/215 (40.93%), Postives = 97/215 (45.12%), Query Frame = 0
BLAST of Spg002020 vs. NCBI nr
Match: XP_022159392.1 (bidirectional sugar transporter SWEET5-like, partial [Momordica charantia]) HSP 1 Score: 130.6 bits (327), Expect = 1.6e-26 Identity = 87/210 (41.43%), Postives = 95/210 (45.24%), Query Frame = 0
BLAST of Spg002020 vs. NCBI nr
Match: XP_022159197.1 (bidirectional sugar transporter SWEET5-like [Momordica charantia]) HSP 1 Score: 130.2 bits (326), Expect = 2.1e-26 Identity = 88/215 (40.93%), Postives = 96/215 (44.65%), Query Frame = 0
BLAST of Spg002020 vs. NCBI nr
Match: XP_022150125.1 (bidirectional sugar transporter SWEET4-like [Momordica charantia] >XP_022159331.1 bidirectional sugar transporter SWEET4-like [Momordica charantia]) HSP 1 Score: 129.4 bits (324), Expect = 3.6e-26 Identity = 86/215 (40.00%), Postives = 97/215 (45.12%), Query Frame = 0
BLAST of Spg002020 vs. NCBI nr
Match: XP_038904326.1 (bidirectional sugar transporter SWEET5-like [Benincasa hispida]) HSP 1 Score: 129.0 bits (323), Expect = 4.8e-26 Identity = 91/215 (42.33%), Postives = 96/215 (44.65%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy Swiss-Prot
Match: Q0J349 (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET7B PE=3 SV=2) HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21 Identity = 50/77 (64.94%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy Swiss-Prot
Match: A2YZ24 (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica OX=39946 GN=SWEET7B PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.2e-21 Identity = 49/77 (63.64%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy Swiss-Prot
Match: B9G2E6 (Putative bidirectional sugar transporter SWEET7d OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET7D PE=3 SV=3) HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20 Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy Swiss-Prot
Match: A2WSD3 (Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica OX=39946 GN=SWEET6B PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17 Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy Swiss-Prot
Match: A2WSD8 (Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica OX=39946 GN=SWEET6A PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.2e-17 Identity = 43/70 (61.43%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy TrEMBL
Match: A0A6J1DYC7 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111025686 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 6.1e-27 Identity = 88/215 (40.93%), Postives = 97/215 (45.12%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy TrEMBL
Match: A0A6J1DZQ7 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111025807 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 7.9e-27 Identity = 87/210 (41.43%), Postives = 95/210 (45.24%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy TrEMBL
Match: A0A6J1DZ58 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111025616 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26 Identity = 88/215 (40.93%), Postives = 96/215 (44.65%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy TrEMBL
Match: A0A6J1D7L9 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111018380 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26 Identity = 86/215 (40.00%), Postives = 97/215 (45.12%), Query Frame = 0
BLAST of Spg002020 vs. ExPASy TrEMBL
Match: A0A6J1DSM8 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111023542 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.5e-25 Identity = 86/215 (40.00%), Postives = 94/215 (43.72%), Query Frame = 0
BLAST of Spg002020 vs. TAIR 10
Match: AT3G28007.1 (Nodulin MtN3 family protein ) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17 Identity = 45/84 (53.57%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of Spg002020 vs. TAIR 10
Match: AT5G62850.1 (Nodulin MtN3 family protein ) HSP 1 Score: 86.7 bits (213), Expect = 2.5e-17 Identity = 50/96 (52.08%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of Spg002020 vs. TAIR 10
Match: AT5G40260.1 (Nodulin MtN3 family protein ) HSP 1 Score: 82.4 bits (202), Expect = 4.8e-16 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Spg002020 vs. TAIR 10
Match: AT5G40260.2 (Nodulin MtN3 family protein ) HSP 1 Score: 82.4 bits (202), Expect = 4.8e-16 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Spg002020 vs. TAIR 10
Match: AT4G10850.1 (Nodulin MtN3 family protein ) HSP 1 Score: 78.6 bits (192), Expect = 6.9e-15 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|