Spg002010 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002010
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L7a
Location	scaffold10: 1013545 .. 1019424 (+)
RNA-Seq Expression	Spg002010
Synteny	Spg002010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTGCTTATTCGAGTTTGCAATGGCGATGGTTGGACGGCGGCGGCGCTTCCGGTGGTGGTTGGTTGTCGGCAGCAAGAAAAGGATCGGAGATGAGAAGGGAAAAAGAGGTCGAGAGACCATGAGGGAGGAATGAAGGGAGGAAGAAACCGTGTGTGAATTGGGAAAATTAGTGAGTGGTTTTAGGGATTTTTTTTTTTGAAAAATTGGGAGTGATTTTAGAGATCTTTCAAAATTGGAAAGTAATTAAAAAATCTTTTTCCTTTTCCGTTCACTCTCTCCCACCCACGGTATGAAAATTGAAATTTGAAGGAAATGGTTTGTGTTTCCTTTTTTGGTTTTATTTTATTTATTATTATTTTTAAATAGTTAGTAGTGGATATGAGGGTTGAATCTAAAAGGGCCATAATTTTTATGAAAAAAAGTTGGGCCATTAGGCATTTTCTGTAAAAAATGGGAATTTTGGACATTTATGAAATATAGGGCCCAAATTTGGGCTATCTATGTACTTTTTCCAACTTTTTATTTTGTGTTTAATAAGTCTTTTACATATTAAATATATTTGTAAAAATTAACTGATCCTAAACTATCAATTTGGTGTTTAATATGTTTGTACATTTTAAAATGTTGAATTGATAAAAAAAAATTGTGTATTAGATAAATGGAAAGTTTAGATCCCTTTGATAACCATTTCGTTTTTTGGTTTTTGGTTTTTGAAAATTAAGTCTATAAACACTATTTTTACTCACAAGCGTTCTTTTATCTACATCCCTTACCATGTTTTAAAAAATCAAGTCAAATTTTGAAAAAAAAAAAAAAAAATTCAAAAACTTGTTTTTGTTTTTGGAATTTAACTAGGAACTCAAATGTCTCATTAACAAAAATGGAAACCAATGTAAGAAGATTGAGAGAAAACAAGGACAATTTTTAAAAACCTAAAAACAAAAAACGAAATGGTTATCAAACGGGACCTTAGGGACCAAACTTATAATTTAACCTTTTCATAATGAATATAGCAATAATGTGCAATTTGGGTTTCAAATCTTTTATCAATAAGAAAATTACTATTACCTCTCTTTTTTTTTTTTTTTTTTTAAATGAATAACCAGGCTTTCATCGAGAAAAAATGAAAGAATACAAGGGCGACCAAAAACAACCCGCCCACAAAAAAAGAGGGAGACCCCATTAGATAAAGGGGCTCCAATCCAAAATAATAAGACCTATGGAATAATTACAAAATAAACGCGTCACCGACGCCCAAAGAGAAACGTTATATCTCACAAGGGACCAAACCTCAGTCGAATCCCTCTCAAACCCTCTAAACGTCCTATTGTTTCTCTCACCCCAAAGCCCCCAAATAATTGCGAAAATCCCCGCCTGCCACAAGAAATTCCCTTGTTCTCAAAAAGGGAGATGGGGAAGGAACTCCTCGATCACCTTATTTATTGAGTTATGTTCAAGTTGACGTCACATTAATATGATTAATGATGTATAATTAATTAGCCAACAAGTGAAAACCCTAAATTTGACACATCTAAAATTGACTAATTCAATAAGGAAAACCCTTTAAAACCTAGACTTGCAATTTTTGAAAACATGTAAATACGCCAAACAAAAGAGATGGAGGTCAAGAGAGATAATTAATTAAAGGAAGCAAATGTCCAAATTGGAAAAATATAAAAAAATCAACATTTATGTTTAAGAAGTAGAAAGATATAAATTCTAATAGTTTTGAATTGAATTTTGAATAAAAAAAAAAACATAACATAATAGATTTGGAATAACAAATAAAAAATAAAATTTGTAAATTTGTAAATAAAAAATTTTAGGGGTGATAAATCTAAGGTTCAGATTGGAGAATCATTGCCAAAGCGAGCTTAGCTCAGTGGTAATTGGCATGTATCCTCGACCATGAGATCAGAGATTCGAATCCCCCACCTCCAAATGTTGATGTACTAAAAAAAAAGATTGGAGAAACATTGTTATTATAGCTCTAGTATGGTCACTGACACATCAAATTAATCGGAGTCTATCAGTGATAGACACTGATAGAAAATATTATACACTATTATTGATAATCACTGATAGACTTCGATTAATCGGAATCTATTAGTGAATTAGTGTCTATCACTCATAGTCACTTGTACATCGAATTAATCGAAATCTATCAATGATAGACACTTGTATAAGTGATTATATGGAGATACTTAGAATTCGCACACAATTCGAAATGAAGATAGGAGTAAAACGAAAATTACGAAATTTTGTTGGGAAAAAAACCTTTTTGGTCATTGAGTTATGGGGAATAGGTGCATTTGGTCCCTGAGTTTTCAAAATAGACATTTTTAGTCTTTAAGTTTTAAGAGATAAGTTTAAAATGTACCTCATATTATTTTTTAAAAGTTTTTAAATTAATAATTTTAATTTTTAAAAATTATGAGACAATACAATATTAAAAAATAATAAAAGTATTAATTAAAAATGTTGAAAAATAACACGAGGACATTTTTAACCTATTTCTCAAAACTCAAGAACTAAATAGATCCATTTTGAAAACTCTACAATCTTTTAAACCTATTTCTCAAAATTTATTTCCATTATAGAAAGACTAATCGTCACTCCTCCGACTTTTCCACTCGGCAGCCCAAGATATCGGGCCCATCAGCCCAAGATATAGGGCCCATAAGCCCAGCTCATCGCAATAAAAGGGCCGAAAAATCATAAGCCCATCTTGCTGTTCTTATTTTTTGCCCTAGCCGTCTGCTTCGCTTTCCCTCTCTTTGCTTCACGCTACTTCGCCGCCGCTTATTTATATTCGATTTCTCCTCTGCCTCCGCTTTTCACCACGCTCGAGTAAAATGGTACGAATCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCGTTTTGGTTTAATACTTCGTTTGCGTTTTCTAGAGCGTTGAGATTCGATCTTTTGTTTTCAGATGCAATAGTAGAATCGATGCTTGAATGTGTTTTTAGTTAGTCTGTTTTTGAAAATGAAAAAAACCCTGTTTTAAGCTCACATTGCAGTTGCGTTCTCTGCGCTTTCAGATTTGAAATCTGAAAATCTTGAAAACATCACGAGGTTAATGTTTGTTCTGTCGATCTTCGGAAACCACGAGTTATGATCATTGAATCTGTTTGAACCACTTTTATTCGAAGCGGTTTTTGGCCTATGTTGGTTTTGATGTGTATGTGAGCTGTGTGCTGCTTTGTGTTGCTGCTGGGTATTGGACTGCGTCTTTTGAAAACTGCTTGCTAGGTTAGAGTGGTTGAGTTGAAACTCGAGTGGCACCCACCTTTTGGTTTTACCTATTTAGCTTGGCTTTCTACCCTTACCACGTATTTTCTTTTCTTTTTCTTTTGTTTTTTTGAATCTCTCTTTTAATAATAAATGAAGTTCTTTTTGTAATTTTTATTTCTCGTTTGCATTGTTGTGTATATTTTAGATCCTTTATGTTTATTGACTATAAGGCAAAGTAGCATAAATTACAAGTATATTTTTACGAATCCAAATTACCAATATTATATAATTCTTGCATAGGCTTTCAAGTTCAGCCCTGAAGAGATATAAATAAAAAATGGTTGATGTCCATGTAATAAAAATAATGGCAGCTATACTGATAACATCAGCATAAATATACTTCAATATAGTTCAATCAGTTAAAACATCTGTAACCTTGCCTAGTATTGGGATTATATTTGCATCCCTTGTATGAATTGCTGTATTCTTCACGCTAATGTAATACAAATAAGACCGTTGTACCAATAGTGCAGCTGCTTTTGAGGAGATGTAACGAAAATATGAAGAAAATTGATATTTTCTGAAATTCAAGTTGTTTTTCTATTCCATCGTGTTTTACTTTCAAAACTCTAGGAGATACCAATATCTATGAGTTGTAAGTTCAAATCCGTTTCCCCCACTTCATTTTTATCATAACAAGTGATTCCTTCTCTTTGCATTATATTTTATTTTTTCTCCTCAAAATTTCAAAGAAGTTTTGTCTTTGCCTGGAATGAAATTGACTGATATCATTTTATTGTATTCTTAAAAGGCACCGAAGAAGGCTGTTGGAAAAGCCTTGGCAAAAAAGAAGCCGGTAAATGATTCTTTTTCTTGATTTATGTCACCTGTTTTATTATTGTTCTGGTTTCTTGGCTGTTTTGTTTAATACAGTGTTGTGGTGTTAGCAGGAGAAGGTGGTGAACCCTCTATTTGAGAAGCGTCCAAAGCAGTTTGGAATTGGTGGGGCATTGCCACCGAAGAGGGATTTGACACGGTTTGTCAAATGGCCAAAAGCTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACTAAGACCCTGGACAAAAATCTTGGTAATGCCATTAAATGTAGGATCATAAAATATTTTCATGCAGAATCCTATTACATGATCAGTCTTGAAATTCTTAAATTAACTATTATGTTTTAGATTGTCATTTACATTGAGAAACTATGTGTTTGACCTTGCAAATGTATTTTTACAGTTTACTTTTGGTCAATAACTTCGGGCTCTGTGAATTTATATTGCAGATTGAACTGTCCCTTCATTTTTTCTGATGATTTTTTAATTGTTTTTAGTGCATATGCTATTTGGTCATTTTGGAAAGTGTGATAGTCTCTTCTCTGATTCCAATAAATGCATCTCGTCATCTTTTATCTGATATTTGTTGGATTTTAATTGTATTTTTCATCGACTTTTTCTTGATATTGGTTGTAAGTGTTCGTTGTGTTTGTTTTATGTTTAATGTCTGTCATATGTATATGCAGCGACAAACCTGTTCAAGATGCTTTTGAAGTATAGGCCGGAGGACAAAGCTCAGAAAAGGGAGCGCCTTCTAAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCTAAAAAACCTATTGTGGTTAAATATGGTCTCAACCATGTCACATACCTCATTGAGCAGGTGTTATTTTATTCCATACATGTGAAGATTTTATACTGTCTGACATCAAATGTACTCATGACATGAACTTCCTTTTCAGAACAAGGCACAGCTTGTTGTGATTGCACATGATGTGGATCCGATTGAGTTGGTCGTTTGGCTTCCTGCTCTTTGCAGGAAGATGGAAATTCCATACTGCATTGTGAAGGGAAAAGCACGATTGGGATCGGTAACTATGCCGACCCTTTATTTCTAACAAATCCCAATTCTTTCCAATTGTATGAAAGCCCGTGTACCAATGCTTGTTATTCTGCCTTTGTAACAGATTGTCCATAAAAAGACTGCATCGGTTTTGTGCTTGACGACCGTAAAGAATGAAGATAAGTTGGAGTTCAGCAGGATCCTTGAAGCTATTAAGGTGATTTATATAGGCTTTAATGACACTTGGCTAGTAATGCATCTGATTGGCATAGTATTAATAACTTCTCTGTTATACTTCTCGGTTGCTTCTTTTAGGCAAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGAGGTGGAATCATGGGCTCCAAGTCTCAGGCTAAAACTAAAGCAAAGGAGAAGCTCCTCGCCAAGGAAGCTGCACAAAGAATGTCTTAGGGATCAGAGTTGTGCTTTTATAACTTGCAGATTTTTGTTTAATTAAAAAGAAAGCCATGGAGACTTGGTAATTATTTTTGGCTCTTAGCTTCTTCAATACCAGAGAGTTTAGAAGTTTTGTTTACTTAATATGATTTGCTCATTTGTGATTTGACATCTAATTTTGGTGTTGCCAGACCCTTTCCCTAATTTGTTCTTTATATTATATATTATTCATGAGAATCTAG

mRNA sequence

ATGGATGCTGCTTATTCGAGTTTGCAATGGCGATGGTTGGACGGCGGCGGCGCTTCCGGTGGTGGTTGGTTGTCGGCAGCAAGAAAAGGATCGGAGATGAGAAGGGAAAAAGAGGCACCGAAGAAGGCTGTTGGAAAAGCCTTGGCAAAAAAGAAGCCGGAGAAGGTGGTGAACCCTCTATTTGAGAAGCGTCCAAAGCAGTTTGGAATTGGTGGGGCATTGCCACCGAAGAGGGATTTGACACGGTTTGTCAAATGGCCAAAAGCTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACTAAGACCCTGGACAAAAATCTTGCGACAAACCTGTTCAAGATGCTTTTGAAGTATAGGCCGGAGGACAAAGCTCAGAAAAGGGAGCGCCTTCTAAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCTAAAAAACCTATTGTGGTTAAATATGGTCTCAACCATGTCACATACCTCATTGAGCAGAACAAGGCACAGCTTGTTGTGATTGCACATGATGTGGATCCGATTGAGTTGGTCGTTTGGCTTCCTGCTCTTTGCAGGAAGATGGAAATTCCATACTGCATTGTGAAGGGAAAAGCACGATTGGGATCGATTGTCCATAAAAAGACTGCATCGGTTTTGTGCTTGACGACCGTAAAGAATGAAGATAAGTTGGAGTTCAGCAGGATCCTTGAAGCTATTAAGGCAAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGAGGTGGAATCATGGGCTCCAAGTCTCAGGCTAAAACTAAAGCAAAGGAGAAGCTCCTCGCCAAGGAAGCTGCACAAAGAATGTCTTAG

Coding sequence (CDS)

ATGGATGCTGCTTATTCGAGTTTGCAATGGCGATGGTTGGACGGCGGCGGCGCTTCCGGTGGTGGTTGGTTGTCGGCAGCAAGAAAAGGATCGGAGATGAGAAGGGAAAAAGAGGCACCGAAGAAGGCTGTTGGAAAAGCCTTGGCAAAAAAGAAGCCGGAGAAGGTGGTGAACCCTCTATTTGAGAAGCGTCCAAAGCAGTTTGGAATTGGTGGGGCATTGCCACCGAAGAGGGATTTGACACGGTTTGTCAAATGGCCAAAAGCTGTTCAAATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACTAAGACCCTGGACAAAAATCTTGCGACAAACCTGTTCAAGATGCTTTTGAAGTATAGGCCGGAGGACAAAGCTCAGAAAAGGGAGCGCCTTCTAAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCTAAAAAACCTATTGTGGTTAAATATGGTCTCAACCATGTCACATACCTCATTGAGCAGAACAAGGCACAGCTTGTTGTGATTGCACATGATGTGGATCCGATTGAGTTGGTCGTTTGGCTTCCTGCTCTTTGCAGGAAGATGGAAATTCCATACTGCATTGTGAAGGGAAAAGCACGATTGGGATCGATTGTCCATAAAAAGACTGCATCGGTTTTGTGCTTGACGACCGTAAAGAATGAAGATAAGTTGGAGTTCAGCAGGATCCTTGAAGCTATTAAGGCAAATTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGAGGTGGAATCATGGGCTCCAAGTCTCAGGCTAAAACTAAAGCAAAGGAGAAGCTCCTCGCCAAGGAAGCTGCACAAAGAATGTCTTAG

Protein sequence

MDAAYSSLQWRWLDGGGASGGGWLSAARKGSEMRREKEAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS

Homology

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BLAST of Spg002010 vs. NCBI nr
Match: KAG6579662.1 (60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 487.3 bits (1253), Expect = 9.5e-134
Identity = 255/270 (94.44%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 25  SAARKGSEMRREKEAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFV 84
           +AA     +   K APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFV
Sbjct: 30  AAATSPRPIAARKMAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFV 89

Query: 85  KWPKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLL 144
           KWPKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLL
Sbjct: 90  KWPKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLL 149

Query: 145 KRAQEEAEGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRK 204
           KRAQEEAEGK HDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRK
Sbjct: 150 KRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRK 209

Query: 205 MEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKK 264
           MEIPYCIVKGKARLG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKK
Sbjct: 210 MEIPYCIVKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKK 269

Query: 265 WGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 295
           WGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 270 WGGGIMGSKSQAKTKAKERLLAKEAAQRMS 299

[Close]

BLAST of Spg002010 vs. NCBI nr
Match: KAG7017114.1 (60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 252/256 (98.44%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI
Sbjct: 1   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 60

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK HDA
Sbjct: 61  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 120

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 121 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 180

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 181 GAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 240

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+LLAKEAAQRMS
Sbjct: 241 KAKERLLAKEAAQRMS 256

[Close]

BLAST of Spg002010 vs. NCBI nr
Match: XP_022970188.1 (60S ribosomal protein L7a-2-like [Cucurbita maxima])

HSP 1 Score: 486.5 bits (1251), Expect = 1.6e-133
Identity = 251/256 (98.05%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIV+KYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVIKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+LLAKEAAQRMS
Sbjct: 242 KAKERLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. NCBI nr
Match: XP_004148008.1 (60S ribosomal protein L7a-2 isoform X1 [Cucumis sativus] >KGN58157.1 hypothetical protein Csa_017460 [Cucumis sativus])

HSP 1 Score: 486.5 bits (1251), Expect = 1.6e-133
Identity = 250/256 (97.66%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGA+PPKRDLTRFVKWPK VQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED++QKRERLLKRAQEEA+GKPHDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           GSIVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKEKLLAKEAAQRMS
Sbjct: 242 KAKEKLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. NCBI nr
Match: XP_022928907.1 (60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_022970187.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_023551211.1 60S ribosomal protein L7a-2 [Cucurbita pepo subsp. pepo] >KAG7017115.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.1 bits (1250), Expect = 2.1e-133
Identity = 252/256 (98.44%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G+IVH+KTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+LLAKEAAQRMS
Sbjct: 242 KAKERLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 9.6e-121
Identity = 217/256 (84.77%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKK V K  +KKKPEKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRI
Sbjct: 2   APKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERLL +AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAES 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G++VH+KTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+++AKEAAQRM+
Sbjct: 242 KAKERVIAKEAAQRMN 256

[Close]

BLAST of Spg002010 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.3e-120
Identity = 228/258 (88.37%), Postives = 244/258 (94.57%), Query Frame = 0


Query: 39  APKKAVGKA--LAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKK 98
           APK+  G+A   AKKK EKV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR++
Sbjct: 2   APKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 61

Query: 99  RILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPH 158
           RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDKA K+ERLLKRAQ EAEGK  
Sbjct: 62  RILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTV 121

Query: 159 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 218
           +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKA
Sbjct: 122 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKA 181

Query: 219 RLGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 278
           RLGSIVHKKTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQA
Sbjct: 182 RLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQA 241

Query: 279 KTKAKEKLLAKEAAQRMS 295
           KTKA+EKLLAKEAAQRM+
Sbjct: 242 KTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Spg002010 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.3e-120
Identity = 228/258 (88.37%), Postives = 244/258 (94.57%), Query Frame = 0


Query: 39  APKKAVGKA--LAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKK 98
           APK+  G+A   AKKK EKV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR++
Sbjct: 2   APKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 61

Query: 99  RILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPH 158
           RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDKA K+ERLLKRAQ EAEGK  
Sbjct: 62  RILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTV 121

Query: 159 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 218
           +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKA
Sbjct: 122 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKA 181

Query: 219 RLGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 278
           RLGSIVHKKTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQA
Sbjct: 182 RLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQA 241

Query: 279 KTKAKEKLLAKEAAQRMS 295
           KTKA+EKLLAKEAAQRM+
Sbjct: 242 KTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Spg002010 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 432.2 bits (1110), Expect = 4.8e-120
Identity = 216/256 (84.38%), Postives = 244/256 (95.31%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKK V  A  KK  EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRI
Sbjct: 2   APKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSES 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G++VH+KTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+++AKEAAQRM+
Sbjct: 242 KAKERVIAKEAAQRMN 257

[Close]

BLAST of Spg002010 vs. ExPASy Swiss-Prot
Match: Q2TBQ5 (60S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3)

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-76
Identity = 151/266 (56.77%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 29  KGSEMRREKEAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK 88
           KG + + +K AP  AV K   K++ +KVVNPLFEKRPK FGIG  + PKRDLTRFVKWP+
Sbjct: 3   KGKKAKGKKVAPAPAVVK---KQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPR 62

Query: 89  AVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQ 148
            +++QR++ IL +RLKVPPA+NQFT+ LD+  AT L K+  KYRPE K +K++RLL RA+
Sbjct: 63  YIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAE 122

Query: 149 EEAEGKPH-DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEI 208
           ++A GK     K+P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM +
Sbjct: 123 KKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGV 182

Query: 209 PYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGG 268
           PYCI+KGKARLG +VH+KT + +  T V +EDK   ++++EAI+ N+ND+YDE R+ WGG
Sbjct: 183 PYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGG 242

Query: 269 GIMGSKSQAKTKAKEKLLAKEAAQRM 294
            ++G KS A+    EK  AKE A ++
Sbjct: 243 NVLGPKSVARIAKLEKAKAKELATKL 265

[Close]

BLAST of Spg002010 vs. ExPASy TrEMBL
Match: A0A6J1I354 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469157 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.9e-134
Identity = 251/256 (98.05%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIV+KYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVIKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G+IVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+LLAKEAAQRMS
Sbjct: 242 KAKERLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. ExPASy TrEMBL
Match: A0A0A0LBU9 (60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.9e-134
Identity = 250/256 (97.66%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGA+PPKRDLTRFVKWPK VQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED++QKRERLLKRAQEEA+GKPHDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           GSIVHKKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKEKLLAKEAAQRMS
Sbjct: 242 KAKEKLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. ExPASy TrEMBL
Match: A0A6J1HZX8 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469156 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.0e-133
Identity = 252/256 (98.44%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G+IVH+KTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+LLAKEAAQRMS
Sbjct: 242 KAKERLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. ExPASy TrEMBL
Match: A0A6J1EL96 (60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435676 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.0e-133
Identity = 252/256 (98.44%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G+IVH+KTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+LLAKEAAQRMS
Sbjct: 242 KAKERLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. ExPASy TrEMBL
Match: A0A6J1F7G7 (60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111441558 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.0e-133
Identity = 252/256 (98.44%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKAHDA 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G+IVH+KTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+LLAKEAAQRMS
Sbjct: 242 KAKERLLAKEAAQRMS 257

[Close]

BLAST of Spg002010 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 434.5 bits (1116), Expect = 6.8e-122
Identity = 217/256 (84.77%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKK V K  +KKKPEKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRI
Sbjct: 2   APKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERLL +AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAES 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G++VH+KTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+++AKEAAQRM+
Sbjct: 242 KAKERVIAKEAAQRMN 256

[Close]

BLAST of Spg002010 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 432.2 bits (1110), Expect = 3.4e-121
Identity = 216/256 (84.38%), Postives = 244/256 (95.31%), Query Frame = 0


Query: 39  APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 98
           APKK V  A  KK  EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRI
Sbjct: 2   APKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 99  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKPHDA 158
           LKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSES 121

Query: 159 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 218
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 219 GSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 278
           G++VH+KTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

Query: 279 KAKEKLLAKEAAQRMS 295
           KAKE+++AKEAAQRM+
Sbjct: 242 KAKERVIAKEAAQRMN 257

[Close]

BLAST of Spg002010 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.4e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 164 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVH 223
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 224 KKTASVLCLTTVKNEDKLE 243
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Spg002010 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.4e-04
Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 164 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVH 223
           +K G N  T  + +  ++ +V+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACD 94

Query: 224 KKTASVLCLTTVKNEDKLE 243
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of Spg002010 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.4e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 164 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVH 223
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 224 KKTASVLCLTTVKNEDKLE 243
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

The following BLAST results are available for this feature:

BLAST of Spg002010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579662.1	9.5e-134	94.44	60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7017114.1	1.2e-133	98.44	60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022970188.1	1.6e-133	98.05	60S ribosomal protein L7a-2-like [Cucurbita maxima]	[more]
XP_004148008.1	1.6e-133	97.66	60S ribosomal protein L7a-2 isoform X1 [Cucumis sativus] >KGN58157.1 hypothetica...	[more]
XP_022928907.1	2.1e-133	98.44	60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ...	[more]

BLAST of Spg002010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZH9	9.6e-121	84.77	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1	[more]
P35685	1.3e-120	88.37	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
P0DKK7	1.3e-120	88.37	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
P49692	4.8e-120	84.38	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
Q2TBQ5	1.5e-76	56.77	60S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3	[more]

BLAST of Spg002010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I354	7.9e-134	98.05	60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469157 PE=3 SV=1	[more]
A0A0A0LBU9	7.9e-134	97.66	60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=3 SV=1	[more]
A0A6J1HZX8	1.0e-133	98.44	60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469156 PE=3 SV=1	[more]
A0A6J1EL96	1.0e-133	98.44	60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435676 PE=3 SV=...	[more]
A0A6J1F7G7	1.0e-133	98.44	60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111441558 PE=3 SV=...	[more]

BLAST of Spg002010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62870.1	6.8e-122	84.77	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT2G47610.1	3.4e-121	84.38	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G22380.1	3.4e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G12600.1	3.4e-04	26.58	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT5G20160.1	3.4e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 199..209 score: 64.46 coord: 183..196 score: 71.43 coord: 209..223 score: 55.45 coord: 164..178 score: 45.76
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 253..273 score: 68.4 coord: 65..82 score: 71.21 coord: 102..121 score: 74.09 coord: 82..99 score: 60.1 coord: 160..180 score: 62.77 coord: 126..139 score: 62.34 coord: 221..245 score: 47.27
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 86..269 e-value: 2.3E-81 score: 273.8
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 124..265
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 151..241 e-value: 1.4E-25 score: 88.8
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 24..292
None	No IPR available	PANTHER	PTHR23105:SF168	BNAA03G47020D PROTEIN	coord: 24..292
IPR004037	Ribosomal protein L7Ae conserved site	PROSITE	PS01082	RIBOSOMAL_L7AE	coord: 202..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002010.1	Spg002010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding