Spg001966 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg001966
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibulose-phosphate 3-epimerase
Locationscaffold10: 1400118 .. 1403383 (-)
RNA-Seq ExpressionSpg001966
SyntenySpg001966
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTCTTCTTCCCACTTCTCTCTGTTCCATCTCTATCTCTCTCTCTCTCTCCTTCTCTGAAACCCCATTTTCAATCCTTCGTTTTCCGCCCCTATGATCGGAGTGGCATCAAGTTAACAGAGAAAACAAGCAAAATCATCAATGGGTTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCCATGAAATTCAGACTCTCAATTGGGTCTAAAACCAACGGAATGGCAATTCCGCCGTCACCCATCAAAGATAACAACACTCCGATCAACGCCGGTGGCGTCTTCGTCAAATCTCAGAGGTCCCCTTCTCACTTGGGTATTGCCCCTTTTCCTCCTTCTTCTTCTTCTTGAGTTTGTACAAGTGTAATCGGCTTTGTTTTGTTCTTTCTGTTTATTAGTGTGTTGTTGAATTGTTTTTGTTGAGTGATGAATTTTGATGCTTTAGAATCAGTGCTTAGAAAGATTTCGCTTCTTTTTACCCCACTGATCTTCACAAGCAAAGTCATGTGCGATCTAAAGTGTTTGGTTCTTGCGTGTCCCTCTGATTTGACTTTGATTGGTTTCACATCTAAGCCTGTTTCCTTTTCTAATTGAATATCTTATAGAATCATTGCCTTTTGGACATATTGTTTAATTGGAATGATAAAGTAAATCTAGGTCCCATTTGTATTATATTATTTTTTAAAACTGACAAACCGATCTCTTTTCTAATGTAAATCTTCAGAGATTGGTGAACAGGAGAAGGATTTTTTCCCCTTTCTTCTTTTGATTATTATTTTTCATTAAAATGAGAGAAACCCCAGATTTCCTTTCTGTCCCTTGTGGTTTGAGGATCAAATAACTGTTCTGTGTACAAAGATGGAGAAATCCTTCCTTTCTTCATTGGAAGCTCTGTTTCCAGTGAAGTTATATGTTGTTTTTAGTGGATTGTGCTTAATTATTTTTTGAGTTCAATGACATTTAGGGTGAGGATTCGAACCTCTAAACCTTTTGATTGAGGATATATGTTTTAGCTAGTTGAATTATGCTCACGCTGTCGTTGACAAATTGTAATCAATCGATAAAAAGAAACAAAATGTCTAAGAAAGCTTTGTGACTTCAGTTTACTCACTTTTGATGTGTTGATTCATTTAATAGTTATGGGATTTCCTCATAAAGAAAAAATAGTTGAGAATTTTAGTCATATTGTAGTGATAACACCTAATAATTTCTCGAGTGTTTCTCATGATTTGTTGCATACTGGCGTTGGATTATATATATATATATATGTATCAGTGGTAGTATTATCCCTCCTCTGATAAGGATGTCATGAGTTTCTCTTCATCTCACATGAAGCTTGCCAGGGTTCATGGAAAGTGAAGAATGCTAACTCTAGGAGTTTTCATTTATTTTGTTTTTCACCAAAAGGATGGAACTCGGGAACTCAAAAAACTGCTCCCACACATTTGAAGTCCTTATCAACAGGACCAACTCTTGGGGCTAATTTATTACTATTCCTAAGATGCCAGTTTGTTGCAAGTTTAGTTTGGTCTTTCCTATTTGGTTTATGGGGCAATGGGGTTTGTCCCTCTTAAGGATTCCATTACCTTGTATAGTCTTTATTAGAGAAAGGAGAAAAGGATGACAGTAAAACTTTTCTTCCTAGAATGGCAGAGCAGAAGCACTTTCTGTTCTAGGACTTCTTTAACAACTCACAAGGATATGGTGTAAGTGTAACTATATTCCATTGAGATCTTCACACATTTAGGCAGGCAGTCCCGTTTGATAACTATTTGGTTTTTGAAAATTAAGCTGGTAAAAGCTACTTTTGCCTCTAAGTTTCTTTCTTTTGTTTTCTACATTTAAAAGTATTTTCAAAATCCAAGCCAAATTTTGAAAACTAAACAAGTATTTCTGTTTTGGAAATTTGGCTAAGAATTAAACAGAAAACTAAAAGTGGAGTTGTTATCAACAGGGCCTTATTTACTCAATTCTTAAGTTCCAAATTTTACTGTTATGATGTGGTGACCCAACCCATTATGATCAAACTTAAAAAGTCCTTGTTGTGTTAACTTTGAGATTGTGGCTTTCACAGGCTGCTGTATTAGAACTCTTTTAGCTTATATTATCATTAGTGGATTCTTTCTTTTATCCCCATGACTTTCTTGAAAGAGTTTTTCACCCTAGTCCATGTAATATTTTCTGTTTTGCAATCTATCTCGCCTATTTTCACATCGACTTTGAAATGGCTGTTCTATGAAAGAAGCAAGTTGATAATGGAGCCCTCCTGTTTTCATAGGTAGCAAAGATGAAGCGTTTTTTGATTCCAGAGGCTGGTTGGATTCAGATTGTGAAGATGATTTCTACAGTGTCAATGGTGGTAAGTAGCAGACATTTGAATTCTTCTATGCTATTTGCTTTTTTCATCTCCTCTCCTGAAGTATTCCGTTCCAATGGCTGCAGATTTCACCCCTTCACGAGGGAACACTCCGGTACACCACAGCTTCGCCTCCGGTACTCCTCGGATCAACCAAGTTCATGTCATTGACGATCGAACTCCGATCGCCCTGCCCGAACCATCGCCAACAGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCTAGAAATGGCACTGACATACAAGCCAAACCAACTCTAAACGAACTCGCCCTGCAGTCGAATCCCGAAACGCCGTACATCTCAGGAACAAACTCTGTATGCAGCAGCGAGAGGACGACAAATGGAGATGCCTGGATGGAGAAGGAGAGGCCATATGGATCTGTACAATGCTGCCTTCCAAGCTTGGGATCATGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCGAGTCCCGCCATAGCTGTATAAAACAAACGTCAATCGAACACGCCATAAGCCATAAATTCCCTCTGATTCTGCCTTTGTGAGACCCCAAACCTTATGGAGCTCACAATTGTTCAGAAATGTGTAAAGTTCTGAAATATCAGATACAGATGCAGCAGCAGTGATCAAGAGATATTGCTGTTGTTGAAGGCAATGGTTTTCTATATATATATATATATATATATCTTAGATTCTTAGTACATTGTCTCATAGTAGAATATGTAAGAAAACAAAGAGGAAGAGAGGAAGAAGAAAGGGAAAGAAAGTAATAGGACTTTTTGGTCTTCCTTTAGATTAAGTTTGTTTCTTACCATGAGAATTATAATAAACAGCCCTTGTGTTTGTTAATAAAAGAAGAAATGTTTTACTAGTTCATTTAACTTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGGGTTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCCATGAAATTCAGACTCTCAATTGGGTCTAAAACCAACGGAATGGCAATTCCGCCGTCACCCATCAAAGATAACAACACTCCGATCAACGCCGGTGGCGTCTTCGTCAAATCTCAGAGGTCCCCTTCTCACTTGGGTAGCAAAGATGAAGCGTTTTTTGATTCCAGAGGCTGGTTGGATTCAGATTGTGAAGATGATTTCTACAGTGTCAATGGTGATTTCACCCCTTCACGAGGGAACACTCCGGTACACCACAGCTTCGCCTCCGGTACTCCTCGGATCAACCAAGTTCATGTCATTGACGATCGAACTCCGATCGCCCTGCCCGAACCATCGCCAACAGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCTAGAAATGGCACTGACATACAAGCCAAACCAACTCTAAACGAACTCGCCCTGCAGTCGAATCCCGAAACGCCGTACATCTCAGGAACAAACTCTGTATGCAGCAGCGAGAGGACGACAAATGGAGATGCCTGGATGGAGAAGGAGAGGCCATATGGATCTGTACAATGCTGCCTTCCAAGCTTGGGATCATGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCGAGTCCCGCCATAGCTGTATAA

Coding sequence (CDS)

ATGGGTTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCCATGAAATTCAGACTCTCAATTGGGTCTAAAACCAACGGAATGGCAATTCCGCCGTCACCCATCAAAGATAACAACACTCCGATCAACGCCGGTGGCGTCTTCGTCAAATCTCAGAGGTCCCCTTCTCACTTGGGTAGCAAAGATGAAGCGTTTTTTGATTCCAGAGGCTGGTTGGATTCAGATTGTGAAGATGATTTCTACAGTGTCAATGGTGATTTCACCCCTTCACGAGGGAACACTCCGGTACACCACAGCTTCGCCTCCGGTACTCCTCGGATCAACCAAGTTCATGTCATTGACGATCGAACTCCGATCGCCCTGCCCGAACCATCGCCAACAGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCTAGAAATGGCACTGACATACAAGCCAAACCAACTCTAAACGAACTCGCCCTGCAGTCGAATCCCGAAACGCCGTACATCTCAGGAACAAACTCTGTATGCAGCAGCGAGAGGACGACAAATGGAGATGCCTGGATGGAGAAGGAGAGGCCATATGGATCTGTACAATGCTGCCTTCCAAGCTTGGGATCATGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCGAGTCCCGCCATAGCTGTATAA

Protein sequence

MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINAGGVFVKSQRSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIALPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSSERTTNGDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV
Homology
BLAST of Spg001966 vs. NCBI nr
Match: XP_038901054.1 (uncharacterized protein At3g27210-like [Benincasa hispida])

HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109
Identity = 198/220 (90.00%), Postives = 206/220 (93.64%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINAGGVFVKSQRSPSHLGS 60
           MGSC SIHRNSDSAMKFRLS+ SKTN M IPPSPIKDNNTPINA  +F KSQ SPSHLGS
Sbjct: 1   MGSCASIHRNSDSAMKFRLSLASKTNDMPIPPSPIKDNNTPINA-SLFPKSQTSPSHLGS 60

Query: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIA 120
           KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH SF+ GTPRINQVHV+DDRTPIA
Sbjct: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSFGTPRINQVHVVDDRTPIA 120

Query: 121 LPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSSERTTN 180
           +PEPSPTGKKKLA+LFRESSRNGTDIQAKPTLNELALQSNPETPY+SGTNSVCSSERT N
Sbjct: 121 IPEPSPTGKKKLADLFRESSRNGTDIQAKPTLNELALQSNPETPYMSGTNSVCSSERTPN 180

Query: 181 GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           GD   EKERP+GSVQCCLPSLGSCRSFGDRRKKASPAIAV
Sbjct: 181 GDVLSEKERPFGSVQCCLPSLGSCRSFGDRRKKASPAIAV 219

BLAST of Spg001966 vs. NCBI nr
Match: XP_011651566.1 (uncharacterized protein At3g27210 isoform X1 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 3.7e-106
Identity = 193/220 (87.73%), Postives = 201/220 (91.36%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINAGGVFVKSQRSPSHLGS 60
           MGSC SIHRN DSAMKF+LS+ SKT  M IPPSPIK NNTPIN   VF+KSQ SPSHLGS
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINP-TVFLKSQTSPSHLGS 60

Query: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIA 120
           KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH SF+SGTPRINQVH IDD+TPI 
Sbjct: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPIT 120

Query: 121 LPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSSERTTN 180
           +PEPSPTGKK+LAELFRESSRNGTD QAKPTLNELALQSNPETPYISGTNSVCSSERT N
Sbjct: 121 IPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPN 180

Query: 181 GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           GD W EKERP+GSVQCCLPSLGSC SFGDRRKKASPAIAV
Sbjct: 181 GDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

BLAST of Spg001966 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 192/220 (87.27%), Postives = 200/220 (90.91%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINAGGVFVKSQRSPSHLGS 60
           MGSC SIHRN DSAMKF+LS+ SKTN MAIPPSPIK NNTPIN   VF KSQ SPSHLGS
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPINP-TVFHKSQTSPSHLGS 60

Query: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIA 120
           KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTP H SF+SGTPRINQVH IDD+TPI 
Sbjct: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDDQTPIT 120

Query: 121 LPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSSERTTN 180
           +PEPSPTGKKKLA+LFRESSRNGTD QAKPTLNELALQSNPETPY+SGTNSVCSSERT N
Sbjct: 121 IPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSSERTPN 180

Query: 181 GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           GD W EKERP+GSVQCCLPSL SC SFGDRRKKASPAIAV
Sbjct: 181 GDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

BLAST of Spg001966 vs. NCBI nr
Match: KAG6581091.1 (hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104
Identity = 190/225 (84.44%), Postives = 204/225 (90.67%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINA-----GGVFVKSQRSP 60
           MGSCVSIHRNSDSA+KFRLS GSK NG+ IPPSPIKDN+TPI       GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTPV  SF+SGTPR+NQVHV+DD
Sbjct: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120

Query: 121 RTPIALPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPIA+P+PSPTGKKKLAELFR+SSRNGTDIQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTTNGDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           ERT+NGD W+EKER +GS QCCLPSLGS RSF DRRKKASPAIAV
Sbjct: 181 ERTSNGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 225

BLAST of Spg001966 vs. NCBI nr
Match: XP_023529186.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.5 bits (994), Expect = 7.7e-104
Identity = 192/226 (84.96%), Postives = 205/226 (90.71%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINA-----GGVFVKSQRSP 60
           MGSCVSIHRNSDSA+KFRLS GSK NG+ IPPSPIKDN+TPI       GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDD 120
           SH GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPV  SF+SGTPRINQVHV+DD
Sbjct: 61  SHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDD 120

Query: 121 RTPIALPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPIA+P+PSPTGKKKLAELFR+SSRNGTDIQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTTN-GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           ERT+N GD W+EKE+ +GS QCCLPSLGS RSFGDRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

BLAST of Spg001966 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-23
Identity = 77/192 (40.10%), Postives = 102/192 (53.12%), Query Frame = 0

Query: 34  PIKDNNTPINAGGVFVKSQRSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGN 93
           P  +N TP+ +   F  S++S    GSKDE FFDS+ WL SD +DDF+SVNGDFTPS GN
Sbjct: 57  PANNNLTPVKSRWSFSSSKKS---FGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGN 116

Query: 94  TPVHHSFASGTPRINQVHVIDDRTPIALPEPSP-TGKKKLAELFRESSRNGTDIQAKPTL 153
           TP   SF+   PR + +   + +       P+P   +KKL ELFR+S R   +       
Sbjct: 117 TP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIREERE------- 176

Query: 154 NELALQSNPETPYISGTNSVCSSERTTNGDAWMEKERPYGSVQCCLPSLGSC-RSFGDRR 213
            E    S   TPY+SG NS   ++     +   EK++       CLP   SC  SF +RR
Sbjct: 177 -ESGSSSAISTPYLSGANSREFNDTAIEKE---EKKKSNWHHHRCLPGFSSCGGSFMERR 233

Query: 214 KKAS---PAIAV 221
           KK S   P +AV
Sbjct: 237 KKMSSETPVVAV 233

BLAST of Spg001966 vs. ExPASy TrEMBL
Match: A0A0A0LB55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.8e-106
Identity = 193/220 (87.73%), Postives = 201/220 (91.36%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINAGGVFVKSQRSPSHLGS 60
           MGSC SIHRN DSAMKF+LS+ SKT  M IPPSPIK NNTPIN   VF+KSQ SPSHLGS
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINP-TVFLKSQTSPSHLGS 60

Query: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIA 120
           KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH SF+SGTPRINQVH IDD+TPI 
Sbjct: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTPIT 120

Query: 121 LPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSSERTTN 180
           +PEPSPTGKK+LAELFRESSRNGTD QAKPTLNELALQSNPETPYISGTNSVCSSERT N
Sbjct: 121 IPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERTPN 180

Query: 181 GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           GD W EKERP+GSVQCCLPSLGSC SFGDRRKKASPAIAV
Sbjct: 181 GDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

BLAST of Spg001966 vs. ExPASy TrEMBL
Match: A0A1S3BP47 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.2e-106
Identity = 192/220 (87.27%), Postives = 200/220 (90.91%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINAGGVFVKSQRSPSHLGS 60
           MGSC SIHRN DSAMKF+LS+ SKTN MAIPPSPIK NNTPIN   VF KSQ SPSHLGS
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPINP-TVFHKSQTSPSHLGS 60

Query: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIA 120
           KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTP H SF+SGTPRINQVH IDD+TPI 
Sbjct: 61  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDDQTPIT 120

Query: 121 LPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSSERTTN 180
           +PEPSPTGKKKLA+LFRESSRNGTD QAKPTLNELALQSNPETPY+SGTNSVCSSERT N
Sbjct: 121 IPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSSERTPN 180

Query: 181 GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           GD W EKERP+GSVQCCLPSL SC SFGDRRKKASPAIAV
Sbjct: 181 GDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

BLAST of Spg001966 vs. ExPASy TrEMBL
Match: A0A6J1J5K2 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111481493 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102
Identity = 189/226 (83.63%), Postives = 205/226 (90.71%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINA-----GGVFVKSQRSP 60
           MGSCVSIHRNSDSA+KFRLS GSK NG+ IPPSPIKDN+TPI       GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDD 120
           SH GSKD+AFFDSRGWLDSDCEDDFYSVNGDFTPS+GNTPV  SF+SGTPRINQVHV++D
Sbjct: 61  SHFGSKDDAFFDSRGWLDSDCEDDFYSVNGDFTPSQGNTPVRTSFSSGTPRINQVHVVND 120

Query: 121 RTPIALPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPIA+P+PSPTGKKKLAELFR+SSRNGT+IQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTEIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTTN-GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           ERT+N GD W+EKER +GS QCCLPSLGS RSFGDRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

BLAST of Spg001966 vs. ExPASy TrEMBL
Match: A0A6J1F463 (uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.6e-102
Identity = 188/226 (83.19%), Postives = 203/226 (89.82%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINA-----GGVFVKSQRSP 60
           MGSCVSIHRNSDSA+KFRLS GSK NG+ IPPSPIKDN+TPI       GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTPV  SF+SGTPR+NQVHV+DD
Sbjct: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVLDD 120

Query: 121 RTPIALPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TPI +P+PSPTGKKKLAELFR+SSRNGTDIQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIVMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTTN-GDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
           ERT+N GD W+EKE+ +GS QCCLPSLGS RSF DRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 226

BLAST of Spg001966 vs. ExPASy TrEMBL
Match: A0A6J1EK04 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111435186 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.6e-102
Identity = 191/234 (81.62%), Postives = 202/234 (86.32%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPIN-------------AGGV 60
           MGSCVSIHRNSDSA+KFRLSIGSKTN M IPPSPIKDNN  I+              GGV
Sbjct: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAGGAGGVDGEGGVGGV 60

Query: 61  FVKSQRSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRI 120
           FVKSQRSPS LGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH SF+SGTPRI
Sbjct: 61  FVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSGTPRI 120

Query: 121 NQVHVIDDRTPIALPEPSPTGKKKLAELFRESSRNGTDIQAKPTLNELALQSNPETPYIS 180
           NQVHVID++TPIA+PEPSPTGKKKLAELFR+SSR  +DIQAKPTLNELALQSNPE P++S
Sbjct: 121 NQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKPHVS 180

Query: 181 GTNSVC-SSERTTNGDAWMEKERPYGSVQCCLPSLGSCRSFGDRRKKASPAIAV 221
            TNSVC SSERT+NGD W EKERP GS QCCLPSLG CRSFGDRRKKA PAI V
Sbjct: 181 RTNSVCSSSERTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKARPAIVV 234

BLAST of Spg001966 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-24
Identity = 77/192 (40.10%), Postives = 102/192 (53.12%), Query Frame = 0

Query: 34  PIKDNNTPINAGGVFVKSQRSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGN 93
           P  +N TP+ +   F  S++S    GSKDE FFDS+ WL SD +DDF+SVNGDFTPS GN
Sbjct: 57  PANNNLTPVKSRWSFSSSKKS---FGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGN 116

Query: 94  TPVHHSFASGTPRINQVHVIDDRTPIALPEPSP-TGKKKLAELFRESSRNGTDIQAKPTL 153
           TP   SF+   PR + +   + +       P+P   +KKL ELFR+S R   +       
Sbjct: 117 TP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIREERE------- 176

Query: 154 NELALQSNPETPYISGTNSVCSSERTTNGDAWMEKERPYGSVQCCLPSLGSC-RSFGDRR 213
            E    S   TPY+SG NS   ++     +   EK++       CLP   SC  SF +RR
Sbjct: 177 -ESGSSSAISTPYLSGANSREFNDTAIEKE---EKKKSNWHHHRCLPGFSSCGGSFMERR 233

Query: 214 KKAS---PAIAV 221
           KK S   P +AV
Sbjct: 237 KKMSSETPVVAV 233

BLAST of Spg001966 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-20
Identity = 80/228 (35.09%), Postives = 109/228 (47.81%), Query Frame = 0

Query: 1   MGSCVSIHRN-----SDSAMKFRLSIGSKTNGMAIPPSPIKDNNTPINAGGVFVKSQRSP 60
           MGSCVS  ++     SDS +K   S  SK +      + +   ++ IN G   + S R  
Sbjct: 1   MGSCVSSSQSKSSSASDSVVKL-ASFISKPDSTPPLKTDVMITSSTIN-GNPPIDSGRWD 60

Query: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDD 120
           S    +D  FFDSRGWLDSDC+DDF SV G+FTPSRG TPVHH F   TP   +    ++
Sbjct: 61  SG-NKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGE----EN 120

Query: 121 RTPIALPEPSPT-GKKKLAELFRESSRNGTD----------IQAKPTLNELALQSNPETP 180
           +      E SPT  KK+L ELF+E+     +           +A   +      S P TP
Sbjct: 121 KHGEEEEEASPTDNKKRLLELFKETQDEEDEEEEDYVAEGKARACLWIRTPVRSSAPATP 180

Query: 181 YISGTNSVCSSERTTNGDAWMEKERPYGSVQCCLPSLGSCRSFGDRRK 213
           Y +        +R  +            ++  C+P L SC SF DRR+
Sbjct: 181 YNNNKERQQKFKRVRS-----------AALGRCVPRLVSCSSFTDRRR 210

BLAST of Spg001966 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 60/159 (37.74%), Postives = 79/159 (49.69%), Query Frame = 0

Query: 65  FFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIALPEP 124
           FFDSRGWLDSDC+DDF SV G+FTPSRG TPVHH F   TP   +    +++      E 
Sbjct: 3   FFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGE----ENKHGEEEEEA 62

Query: 125 SPT-GKKKLAELFRESSRNGTD----------IQAKPTLNELALQSNPETPYISGTNSVC 184
           SPT  KK+L ELF+E+     +           +A   +      S P TPY +      
Sbjct: 63  SPTDNKKRLLELFKETQDEEDEEEEDYVAEGKARACLWIRTPVRSSAPATPYNNNKERQQ 122

Query: 185 SSERTTNGDAWMEKERPYGSVQCCLPSLGSCRSFGDRRK 213
             +R  +            ++  C+P L SC SF DRR+
Sbjct: 123 KFKRVRS-----------AALGRCVPRLVSCSSFTDRRR 146

BLAST of Spg001966 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-16
Identity = 72/209 (34.45%), Postives = 93/209 (44.50%), Query Frame = 0

Query: 30  IPPSPIKDNNTPI-------NAGGVFVKSQRS-----PSHLGSKDEAFFDSRGWLDSDCE 89
           I  SP+K+N  P+       N     VKS+ S      S   SKDE +FDS  W  SD E
Sbjct: 47  ISESPVKENLAPVATPKTVDNGLSAQVKSRWSFSSSKRSFGSSKDETYFDSHQWQQSDSE 106

Query: 90  DDFYSVNGDFTPSRGNTPVHHSFASGTPRINQVHVIDDRTPIALPEPSPTGKKKLAELFR 149
           DDFYSV GDFTPS GNTP   S +   PRI+      ++  ++        +KKL ELFR
Sbjct: 107 DDFYSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKLGELFR 166

Query: 150 ESSRNGTDIQAKPTLNELALQSNPETPYISGTNSVC--SSERTTNGDAWMEKER---PYG 209
           +S R             + L+ + E        S C  S E     ++  EK+    P  
Sbjct: 167 DSIREE---------RAVILEESSEYQSEKSKKSSCDNSGELKVIEESVKEKKNLKSPLN 226

Query: 210 SVQCCLPSLGSCR-SFGDRRKKASPAIAV 221
               CLP   S + S  D+RKK    I V
Sbjct: 227 YHHRCLPRFSSFKGSLMDKRKKKKKKIHV 245

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038901054.12.7e-10990.00uncharacterized protein At3g27210-like [Benincasa hispida][more]
XP_011651566.13.7e-10687.73uncharacterized protein At3g27210 isoform X1 [Cucumis sativus][more]
XP_008450086.11.1e-10587.27PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo][more]
KAG6581091.14.5e-10484.44hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023529186.17.7e-10484.96uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9LK323.1e-2340.10Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A0A0LB551.8e-10687.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1[more]
A0A1S3BP475.2e-10687.27uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 P... [more]
A0A6J1J5K21.2e-10283.63uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC1114814... [more]
A0A6J1F4634.6e-10283.19uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 ... [more]
A0A6J1EK044.6e-10281.62uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
Match NameE-valueIdentityDescription
AT3G27210.12.2e-2440.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT3G01860.12.5e-2035.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT3G01860.21.4e-1837.74unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT5G40860.14.9e-1634.45unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34280:SF2OS01G0920100 PROTEINcoord: 1..217
IPR038947At3g27210-likePANTHERPTHR34280OS01G0920100 PROTEINcoord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg001966.1Spg001966.1mRNA