Spg001933 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg001933
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold8: 32566275 .. 32567413 (-)
RNA-Seq ExpressionSpg001933
SyntenySpg001933
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAGAAAAGAAAATGGAGGAAGAGATTTTGCCCAAACAGAGGGAAGGCAAGGGCAAAGGTATTGCTGAAGCAGCGGCTGAGACTGACGATATCGAAACTGAGGAGCCACGATTGCCGTACAACCGCTTCATCAATAACCTCACCTGAGCAAAGTATATCAAGATGCTCAAAAGGGACTTTCTGTTGGAACGGGGATTTGGCGATGATCTGCCACGTTTCTTAAGAACTGAAATAGCAAACCATGGCTGGAATAAGTTCTGTGCAAAGCCGGAGCCGGTCAATTCCAATATTGTCTGAGAATTCTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGGGTACTTGTTGATTGGAGTCCAGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGTAGGTTTCAATGAGATGGTGGTGGCGCCATCGAATGATCAGTTAAATGCGACTGTCCGGGAAGTTGGCATCGAGGGAGCTCAGTGGAGACTATCGAAGATAGAAAAGCGCACATTCTGGCGACTTATCTGAAGAGTGAAGCCAATATGTGGATGAGCTTCATCAAGCTGCGCTAGCCAACGACTCACGATTCAACAGTGTCTCGAGACCGGGTACTTCTTGTGTTTGCTATTCTCCGTTCGATGAGTATTGATGTGGGCAAAATAATTTCCAGTGAGATTTTCGATTGCCGGCGGAAAAAGGTTGGGAAAGCTGTTTTTCCCAAACATCATAACAATGTTATGCCAAAAGGCAGGGGTTCCAATGAATGCGGATGATGTTACTCTGATAGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTGCAAAGGACACAGGAAGCACGCCAAGAAAGTTTGGTGTGCGGCATCCATCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAGTTTGCCGAAAGACAATTCCAAACCTTCTGGAATTATGTGAAGAGAAGGGATGTCGCGTTGAGGGGAGCCTTGCAATCAAATTTTTCTAAAACATATTCGACCTTCCCAATATTCCCTGATGACTTACTGAACCCTTGGATTCCGCCACTGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGGTCAGGAGGATTGA

mRNA sequence

ATGAAACAGAAAAGAAAATGGAGGAAGAGATTTTGCCCAAACAGAGGGAAGGCAAGGGCAAAGGTATTGCTGAAGCAGCGGCTGAGACTGACGATATCGAAACTGAGGAGCCACGATTGCCGTACAACCGCTTCATCAATAACCTCACCTGAGCAAAAGGGATTTCAGGCTATCGTCCGAGGGGTACTTGTTGATTGGAGTCCAGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGTAGGTTTCAATGAGATGGTGGTGGCGCCATCGAATGATCAGTTAAATGCGACTGTCCGGGAAGTTGGCATCGAGGGAGCTCACCAATATGTGGATGAGCTTCATCAAGCTGCGCTAGCCAACGACTCACGATTCAACAGTGTCTCGAGACCGGGGGTTCCAATGAATGCGGATGATGTTACTCTGATAGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTGCAAAGGACACAGGAAGCACGCCAAGAAAGTTTGGTGTGCGGCATCCATCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAGTTTGCCGAAAGACAATTCCAAACCTTCTGGAATTATGTGAAGAGAAGGGATGTCGCGTTGAGGGGAGCCTTGCAATCAAATTTTTCTAAAACATATTCGACCTTCCCAATATTCCCTGATGACTTACTGAACCCTTGGATTCCGCCACTGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGGTCAGGAGGATTGA

Coding sequence (CDS)

ATGAAACAGAAAAGAAAATGGAGGAAGAGATTTTGCCCAAACAGAGGGAAGGCAAGGGCAAAGGTATTGCTGAAGCAGCGGCTGAGACTGACGATATCGAAACTGAGGAGCCACGATTGCCGTACAACCGCTTCATCAATAACCTCACCTGAGCAAAAGGGATTTCAGGCTATCGTCCGAGGGGTACTTGTTGATTGGAGTCCAGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGTAGGTTTCAATGAGATGGTGGTGGCGCCATCGAATGATCAGTTAAATGCGACTGTCCGGGAAGTTGGCATCGAGGGAGCTCACCAATATGTGGATGAGCTTCATCAAGCTGCGCTAGCCAACGACTCACGATTCAACAGTGTCTCGAGACCGGGGGTTCCAATGAATGCGGATGATGTTACTCTGATAGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTGCAAAGGACACAGGAAGCACGCCAAGAAAGTTTGGTGTGCGGCATCCATCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAGTTTGCCGAAAGACAATTCCAAACCTTCTGGAATTATGTGAAGAGAAGGGATGTCGCGTTGAGGGGAGCCTTGCAATCAAATTTTTCTAAAACATATTCGACCTTCCCAATATTCCCTGATGACTTACTGAACCCTTGGATTCCGCCACTGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGGTCAGGAGGATTGA

Protein sequence

MKQKRKWRKRFCPNRGKARAKVLLKQRLRLTISKLRSHDCRTTASSITSPEQKGFQAIVRGVLVDWSPGAINSLFNLQDFPHVGFNEMVVAPSNDQLNATVREVGIEGAHQYVDELHQAALANDSRFNSVSRPGVPMNADDVTLIDKGIIDTPNLARLQRTQEARQESLVCGIHQMQEQLQMHSSRMEFAERQFQTFWNYVKRRDVALRGALQSNFSKTYSTFPIFPDDLLNPWIPPLPVEREGDEEEDPGQED
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg001933.1Spg001933.1mRNA