Spg001929 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001929
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold8: 31207565 .. 31210673 (+)
RNA-Seq Expression	Spg001929
Synteny	Spg001929

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACACTCCAAAATCATCATCATCACACAAAATTACTCGTTCCCAGAGTAATCCAACCACCCACGGAGCTGAAGCTAGCGTGCGACGGCAAGAGGAGAACCCCGAACCGCCCATGCACGACACACGAAAGACGAGACCCACGGGATTCTCACCGGCGGTCGTGAACTTTGAACCCAACGTTCAAACTCCATATTCTTCAACAATGTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTACACGAAGGAGGTTCACGCGTGCCACTACTGTTCATCTAACCCAAAAATCTGCCACTCAACAATTCAGAAAACGTTCGCGGGAATGGTTTGCGATGATCCAGGAGTTGAGAGCTCAAAGACTTGCTGTCCTTGAAGAAGAAGGGAATCGACGAGATGAAGAAGAAGCCGCCAAGGCAGCTTGAAGCTCTCGGCAATAAGGAGCTTCATCGGGTAAGCATACTGAACCTTCGACTAACCCCTCTTCATCTTGCAGGACCAAACCCGTTGTTACTTACAGCGAAAGGAAGATGAGTCCTAAGAAAAATGTGCCCGAAAAGCCGCTTGTGGTTGAGCCCCTTAAAATCGCAAGGATGCCTCCGGACGTATTCGAAGGAATAATCCGCCAAGCTGTGGCAAAGGCCCTTGCTATTGCTGAAGGATGCAAGGCTAAACAGGATGCTTTGAAGGAGATTGAAGCTGAGAGAGGGGAGTAGATGAGTTTGCAAGAGAAAAAGACCTGGAGGAAGAGAGGAAAAGAGAAGAGGCCGAGAGGGCCTTAGAAGCTGAAGAAGAAAGAAAGTTTGAGGAAAACCTCAGGAGGGCAGCCATTGAATTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGAGAGGAGTTGAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGCTGACGCGCTGCAAGGGAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAATTTTAGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGTCCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCATTACCTACCGCCAACTTGATCAAATCAGGGAGAACCTGAAGACATATTGGGCATATGCAAAGCAGCGGGATGAAGCCATTAGGGAGTTCTATCTCTCTATAGCCCAAGTATTGCTCCGGTCTTTTCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAAGATGATGAGAATGATGATGAAGATGAAGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAGGGGAGTTTTCTGATGCCCTTTGACTGAAATTTTTTGTACATAATACTGATTTTCTGTTTTTGTTGCTTGCTGTTTTTTTAGTTTTAGCATGTTTTACATTCTGTTTTTAGTTGTCTAGTTGCTGTTTTGATTGCTTTGATTGTTTAGTTTGTTAATAGTTTTGATCATAGGATAGTTTAGATAGCTTGTTGATAGGTTTAGATTAGATAAACTTGGGTTTTACAGGTATTTTCTCTAAAAATCTGCTTGCTGTTTTGAGCTTAACCTATGAACTTTTTGAAAGAAAAAAATCAACTTTAAAGGAAAAAGTGCTTTAAAATGTTTTGGAAGAAAAGTATGTTTTCGAAGGATTTTTCTTTTAAGCCCTTGATGATGAAAACTAGAGTTTTGTTCTATCTCAAAATTGCCACCGTCACAACTGAATTGTTTTCTAGTCATAGGCTTTCCATTAGTCTTTTTCTTTATAGAATTTTCTTAAGTCTAAACTTCCTCGTGTTTAACCTTTCTAACACTCTAGGAGAGTTTAGCCTTGATGTTTTGAAAACAAAAAGCCTCATGTTAAGCCCATGCCTAAAAAACAAAGCCAATGAGGACATTGTCTAACTTTAAGTTTGGGGGGGGGGGGTGCTTTATGCTTCACTGTATAAATATCTTTGTAAATTTGTACTGCTGGAAAAAGAATGTGCTCAGTATCTATCTTTAAAAAAAAAATTTGAAAAATGAAAAACGAGAGTTACTCCTCCTTCCTAGGGTTTACTGAGTAACTAGGGGCATTCATGACACCCATGGGTTGCCACTGCATGAAAGGTTTACCTAGGGAAGTGAGTATCATTCCAAGTTTGTGAACTTTGCTCGTAGCTAGATATCTTCACCACAAAGTGTCGATAAGCTAGACAGAAGGTAAAGATGACGGCAATGATGCTCTTGGGAGAAAAAGAAGTTGAATAATAGGAGCACCAGCAGTCAAATATGTTTGGGGGAGATGGAAAAGGTCTAGTAATTCATGTATGCTCATTTTTACCTCAAGATTGATTTTCTTAACTAAAAGGACTACACTAGGCTCTATGAGTAGAAGTTAGGTAGTTTAAGCACATTGGTTAGGATGGATTAGGGAGAGTTTTGCTTTGAAAAAGAACAATAGAAATCTTCATGCCTAGAAAACTCAGACGTTGTGACTGGCACTAGAGTAGAACGCTCTCCTGAAAGGCAAACATTTTAGAAAACGATCTTGAAAAACATGTTTACTTGATTCCATGTTACTTGATTTGAAATTTAAAGTTGATACTAGAACCATGATTGATTATTACATATCAACCCTAACATTCTGGTTTGCAATTAATATTGAGCTCTTACATTCTGATTTGCAATTAAAAAATTTGATCTCTAACATTCTATTTGGCAATTGCTTGAGGACAAGCAATGACTTATGTTTGGGGCTGTGATAAGGGTAAAAAATATACCTATTTTGCCCTTATATTTAGCTCATTTCTTAGTCAAATATTGTATGTTTTGGTCAAAATATGTTGAAGTTGATAAGTTAGGGTGTTGAGATTCACTTTTGTCAAATTATGCTCATTTATGCTTAAAAAGACTTAATTTTAAGAGAATTTGACTAAGTTTGCTGTTGTGGAGGAAAATAGAGGAAAAGCTGGAATTTCCCCAGAAATGCGACTACATTTCTGGGAAGGCAATATGAAATGCGACCGCATTTCTGGAAAAACCGAGACCGTTCCGAGTCGTCTGCGGGTCGTTGTTGACGAGGCTTCTTAG

mRNA sequence

ATGAAGAACACTCCAAAATCATCATCATCACACAAAATTACTCGTTCCCAGAGTAATCCAACCACCCACGGAGCTGAAGCTAGCGTGCGACGGCAAGAGGAGAACCCCGAACCGCCCATGCACGACACACGAAAGACGAGACCCACGGGATTCTCACCGGCGGTCGTGAACTTTGAACCCAACGTTCAAACTCCATATTCTTCAACAATGTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTACACGAAGGAGGTTCACGCGTGCCACTACTGTTCATCTAACCCAAAAATCTGCCACTCAACAATTCAGAAAACGTTCGCGGGAATGGACCAAACCCGTTGTTACTTACAGCGAAAGGAAGATGAGTCCTAAGAAAAATGTGCCCGAAAAGCCGCTTGTGGTTGAGCCCCTTAAAATCGCAAGGATGCCTCCGGACGTATTCGAAGGAATAATCCGCCAAGCTGTGGCAAAGGCCCTTGCTATTGCTGAAGGATGCAAGGCTAAACAGGATGCTTTGAAGGAGATTGAAGCTGAGAGAGGGGAGAGGGCAGCCATTGAATTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGAGAGGAGTTGAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGCTGACGCGCTGCAAGGGAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAATTTTAGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGTCCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCATTACCTACCGCCAACTTGATCAAATCAGGGAGAACCTGAAGACATATTGGGCATATGCAAAGCAGCGGGATGAAGCCATTAGGGAGTTCTATCTCTCTATAGCCCAAGTATTGCTCCGGTCTTTTCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAAGATGATGAGAATGATGATGAAGATGAAGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAGGGGAAATTTGACTAAGTTTGCTGTTGTGGAGGAAAATAGAGGAAAAGCTGGAATTTCCCCAGAAATGCGACTACATTTCTGGGAAGGCAATATGAAATGCGACCGCATTTCTGGAAAAACCGAGACCGTTCCGAGTCGTCTGCGGGTCGTTGTTGACGAGGCTTCTTAG

Coding sequence (CDS)

ATGAAGAACACTCCAAAATCATCATCATCACACAAAATTACTCGTTCCCAGAGTAATCCAACCACCCACGGAGCTGAAGCTAGCGTGCGACGGCAAGAGGAGAACCCCGAACCGCCCATGCACGACACACGAAAGACGAGACCCACGGGATTCTCACCGGCGGTCGTGAACTTTGAACCCAACGTTCAAACTCCATATTCTTCAACAATGTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTACACGAAGGAGGTTCACGCGTGCCACTACTGTTCATCTAACCCAAAAATCTGCCACTCAACAATTCAGAAAACGTTCGCGGGAATGGACCAAACCCGTTGTTACTTACAGCGAAAGGAAGATGAGTCCTAAGAAAAATGTGCCCGAAAAGCCGCTTGTGGTTGAGCCCCTTAAAATCGCAAGGATGCCTCCGGACGTATTCGAAGGAATAATCCGCCAAGCTGTGGCAAAGGCCCTTGCTATTGCTGAAGGATGCAAGGCTAAACAGGATGCTTTGAAGGAGATTGAAGCTGAGAGAGGGGAGAGGGCAGCCATTGAATTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGAGAGGAGTTGAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGCTGACGCGCTGCAAGGGAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAATTTTAGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGTCCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCATTACCTACCGCCAACTTGATCAAATCAGGGAGAACCTGAAGACATATTGGGCATATGCAAAGCAGCGGGATGAAGCCATTAGGGAGTTCTATCTCTCTATAGCCCAAGTATTGCTCCGGTCTTTTCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAAGATGATGAGAATGATGATGAAGATGAAGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAGGGGAAATTTGACTAAGTTTGCTGTTGTGGAGGAAAATAGAGGAAAAGCTGGAATTTCCCCAGAAATGCGACTACATTTCTGGGAAGGCAATATGAAATGCGACCGCATTTCTGGAAAAACCGAGACCGTTCCGAGTCGTCTGCGGGTCGTTGTTGACGAGGCTTCTTAG

Protein sequence

MKNTPKSSSSHKITRSQSNPTTHGAEASVRRQEENPEPPMHDTRKTRPTGFSPAVVNFEPNVQTPYSSTMSATSREMPSSSTRRRFTRATTVHLTQKSATQQFRKRSREWTKPVVTYSERKMSPKKNVPEKPLVVEPLKIARMPPDVFEGIIRQAVAKALAIAEGCKAKQDALKEIEAERGERAAIELQLLEEEKKRREELKEDEKRRKEAEDFLAAFEPLHKAQSEADALQGRVEEEAQQGPTEEILEKEKEREVENEGQNASASGPHSEEGLAITYRQLDQIRENLKTYWAYAKQRDEAIREFYLSIAQVLLRSFPISLSRCCLKKTRILMKKMMRMMMKMKKRKRVPRTRTRGNLTKFAVVEENRGKAGISPEMRLHFWEGNMKCDRISGKTETVPSRLRVVVDEAS

Homology

The following BLAST results are available for this feature:

BLAST of Spg001929 vs.


Match Name	E-value	Identity	Description

BLAST of Spg001929 vs.


Match Name	E-value	Identity	Description

BLAST of Spg001929 vs.


Match Name	E-value	Identity	Description

BLAST of Spg001929 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..241
None	No IPR available	COILS	Coil	Coil	coord: 169..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001929.1	Spg001929.1	mRNA