Spg001899 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001899
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	F-box domain-containing protein
Location	scaffold10: 3713294 .. 3714392 (-)
RNA-Seq Expression	Spg001899
Synteny	Spg001899

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAAATTACCAACATTAATTGGGAAATTCCACCTGATGATATTATGGAGCTAATTTTCTCAAAACTTGCAATCGTGAATTTGCCTGTTTGTAGGCTGATCTCTAAGGCTTGGAACCATCTCGTTTTAACTTGTAAGTTTGTTCCAATTCCAAGCTTCTATTCCTTTGCCAATATTTCTCCCCATGGCACCCTCCATTGCATCGATCTCCATCGCAAACATTTGAAAGAGATCAATGTTCTTGCCTCCTTTACCTTCCATCCTCGTTTCTCCGACATCAAAATCGTCGGTTCTTACAACGGACTCCTCTGTTTCTCCACGTCTCACACGAAACGTGCTTTCGTTTTAAATCCCATGACAAATGAGTACATCGAACTTCCCACACCCAACGTTGCTGTGGATGGAGATTTTTCTAGATACTTTTATGGATTTGGTTTTAATCCCAAGTCAAAGCAATACAAAATAGTAAGAATTTCCAAACAGCCACTTGACACTGACACAACAGTACAGATTCTTGCATTTATTTGGCACGAGCTTTGACAAATGGGAGAGCATTTCCTCACTGCCGCATGAGATCAACAACGATGGTGTTTACTTGAATGGAGCCCTTTATTGGATTGGACGTTACGGATACGAGAACATCGTCGTACGTTTCGACGTAGAAGATGAGAAATTTGAGGAAATTTATGTTCCCAAAGTTGAGCGAGAGATGAACAAAGATTGTGTGAGCATTTGGGAGTTTAATAGGCATGTCTATCTGTCTTTTTTCGAGTTGCAATATTGTTTGGGGTATCATGTGTGGAAGATGGAAGAAGATTATTCATGGATTAAGGAATTTGTTATTGAAATGCCGATTGTTCATCTTTATTATCTGTTTTGGAGACCACATGATATAGAAATCATCAAAGGTTTGGAAGATGGGAAGCTCTTGTGTGTTGTGTCAAGAATGAGTTTAATCTCGTATGACGCCAACACTAGGAAGATTGAGACATTGCATGAAGAGTTAGCTGATGACCTTTCGAAAGAATTACGGATTTATCAAATTCATTCCTTCAATTTTGCTTCTCTCCAAAACATTTTGGCAGGAGACGTTTGA

mRNA sequence

ATGAGGAAAATTACCAACATTAATTGGGAAATTCCACCTGATGATATTATGGAGCTAATTTTCTCAAAACTTGCAATCGTGAATTTGCCTGTTTGTAGGCTGATCTCTAAGGCTTGGAACCATCTCGTTTTAACTTGTAAGTTTGTTCCAATTCCAAGCTTCTATTCCTTTGCCAATATTTCTCCCCATGGCACCCTCCATTGCATCGATCTCCATCGCAAACATTTGAAAGAGATCAATGTTCTTGCCTCCTTTACCTTCCATCCTCGTTTCTCCGACATCAAAATCGTCGGTTCTTACAACGGACTCCTCTGTTTCTCCACGTCTCACACGAAACGTGCTTTCGTTTTAAATCCCATGACAAATGAGTACATCGAACTTCCCACACCCAACGTTGCTGTGGATGGAGATTTTTCTAGATACTTTTATGGATTTGGTTTTAATCCCAAATTCTTGCATTTATTTGGCACGAGCTTTGACAAATGGGAGAGCATTTCCTCACTGCCGCATGAGATCAACAACGATGGTGTTTACTTGAATGGAGCCCTTTATTGGATTGGACGTTACGGATACGAGAACATCGTCGTACGTTTCGACGTAGAAGATGAGAAATTTGAGGAAATTTATGTTCCCAAAGTTGAGCGAGAGATGAACAAAGATTGTGTGAGCATTTGGGAGTTTAATAGGCATGTCTATCTGTCTTTTTTCGAGTTGCAATATTGTTTGGGGTATCATGTGTGGAAGATGGAAGAAGATTATTCATGGATTAAGGAATTTGTTATTGAAATGCCGATTGTTCATCTTTATTATCTGTTTTGGAGACCACATGATATAGAAATCATCAAAGGTTTGGAAGATGGGAAGCTCTTGTGTGTTGTGTCAAGAATGAGTTTAATCTCGTATGACGCCAACACTAGGAAGATTGAGACATTGCATGAAGAGTTAGCTGATGACCTTTCGAAAGAATTACGGATTTATCAAATTCATTCCTTCAATTTTGCTTCTCTCCAAAACATTTTGGCAGGAGACGTTTGA

Coding sequence (CDS)

ATGAGGAAAATTACCAACATTAATTGGGAAATTCCACCTGATGATATTATGGAGCTAATTTTCTCAAAACTTGCAATCGTGAATTTGCCTGTTTGTAGGCTGATCTCTAAGGCTTGGAACCATCTCGTTTTAACTTGTAAGTTTGTTCCAATTCCAAGCTTCTATTCCTTTGCCAATATTTCTCCCCATGGCACCCTCCATTGCATCGATCTCCATCGCAAACATTTGAAAGAGATCAATGTTCTTGCCTCCTTTACCTTCCATCCTCGTTTCTCCGACATCAAAATCGTCGGTTCTTACAACGGACTCCTCTGTTTCTCCACGTCTCACACGAAACGTGCTTTCGTTTTAAATCCCATGACAAATGAGTACATCGAACTTCCCACACCCAACGTTGCTGTGGATGGAGATTTTTCTAGATACTTTTATGGATTTGGTTTTAATCCCAAATTCTTGCATTTATTTGGCACGAGCTTTGACAAATGGGAGAGCATTTCCTCACTGCCGCATGAGATCAACAACGATGGTGTTTACTTGAATGGAGCCCTTTATTGGATTGGACGTTACGGATACGAGAACATCGTCGTACGTTTCGACGTAGAAGATGAGAAATTTGAGGAAATTTATGTTCCCAAAGTTGAGCGAGAGATGAACAAAGATTGTGTGAGCATTTGGGAGTTTAATAGGCATGTCTATCTGTCTTTTTTCGAGTTGCAATATTGTTTGGGGTATCATGTGTGGAAGATGGAAGAAGATTATTCATGGATTAAGGAATTTGTTATTGAAATGCCGATTGTTCATCTTTATTATCTGTTTTGGAGACCACATGATATAGAAATCATCAAAGGTTTGGAAGATGGGAAGCTCTTGTGTGTTGTGTCAAGAATGAGTTTAATCTCGTATGACGCCAACACTAGGAAGATTGAGACATTGCATGAAGAGTTAGCTGATGACCTTTCGAAAGAATTACGGATTTATCAAATTCATTCCTTCAATTTTGCTTCTCTCCAAAACATTTTGGCAGGAGACGTTTGA

Protein sequence

MRKITNINWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYSFANISPHGTLHCIDLHRKHLKEINVLASFTFHPRFSDIKIVGSYNGLLCFSTSHTKRAFVLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNPKFLHLFGTSFDKWESISSLPHEINNDGVYLNGALYWIGRYGYENIVVRFDVEDEKFEEIYVPKVEREMNKDCVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRPHDIEIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEELADDLSKELRIYQIHSFNFASLQNILAGDV

Homology

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BLAST of Spg001899 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 246.5 bits (628), Expect = 3.3e-61
Identity = 155/386 (40.16%), Postives = 216/386 (55.96%), Query Frame = 0


Query: 3   KITNINWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPS----FYSFA 62
           KI   N E+PP DI++LIFSKL   NLP CRL+S  WN+LVL+CKF P  S    F++  
Sbjct: 8   KIKTTNSELPP-DILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISNLFFAHF 67

Query: 63  NISPHGTLHCIDLHRKHLKEINVLASFTFHPRFSD----IKIVGSYNGLLCFSTSHTKR- 122
                  LHC+DL  +HL+ ++ +ASFTFHP  S     I I+ S +GL+    +  +R 
Sbjct: 68  YSCRDRNLHCVDLDPQHLEGMSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRR 127

Query: 123 ------AFVLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNPKF---------------- 182
                   VLNPMTNEY +LPT     D     YFYG GF+P+                 
Sbjct: 128 GHRPGVVCVLNPMTNEYFKLPTFRSKGD-SVKDYFYGLGFSPRTKQYKLARTHYVCHEFI 187

Query: 183 --LHLFGTSFDKWESISSLPHEINN-DGVYLNGALYWIG-----RYGYENIVVRFDVEDE 242
             +  FGTS + W  + S+P+ +N   GVY NG LYW+G       G  +++ R D+ED+
Sbjct: 188 VEIFAFGTSCE-WTPVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSDVIYRLDLEDD 247

Query: 243 KFEEIYVPKVEREMNKDCVSIWEFNRHVYLSFFELQYCLG---YHVWKMEEDYSWIKEFV 302
           KF++I  P ++ +   D   I  +N  +YL+      C G   YHVWKMEED+SWIKEFV
Sbjct: 248 KFKQISFP-LDGDDEGDFPYIGVYNDTLYLTL-----CCGDFEYHVWKMEEDFSWIKEFV 307

Query: 303 IEMPIVHLYYLFWRPHDI----EIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEELA 343
           + +P  ++++   R H I    ++IK  EDG +LC+ + + LI YD  T   E L ++  
Sbjct: 308 LALP-ENVHHSLPRHHPIGYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQ-D 367

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BLAST of Spg001899 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-53
Identity = 143/387 (36.95%), Postives = 213/387 (55.04%), Query Frame = 0


Query: 4   ITNINWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYS--FANI- 63
           I N ++E+PP DI++ IFSK+   NLP CRL+S+ WN+L+ +CKF P  S Y   FA   
Sbjct: 8   IINKSYELPP-DILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFY 67

Query: 64  -SPHGTLHCIDLHRKHLKEINVLASFTFHPRF----SDIKIVGSYNGLLCFSTSHTKR-- 123
            S H  LHC++   +H++ ++++ASF FHP F    S I I+ S +GL+    +  +R  
Sbjct: 68  SSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRG 127

Query: 124 -----AFVLNPMTNEYIELPTPNVAVDGD-FSRYFYGFGFNPK----------FLH---- 183
                  VLNP+TNEY +   PN+ + GD    Y YG GF+PK          F H    
Sbjct: 128 QRRDVVCVLNPITNEYFK--HPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFI 187

Query: 184 ----LFGTSFDKWESISSLPHEINN-DGVYLNGALYWIGRY---------GYENIVVRFD 243
                FGTS + W  I S+P+ +N   GVY NG LYW+G            Y  +V R D
Sbjct: 188 VDIFAFGTSCE-WTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLD 247

Query: 244 VEDEKFEEIYVPKVEREMNKDCVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEF 303
           + DEKF++I +P        D   +  +N  +YL+     +   YHVWKM+ED+SW KEF
Sbjct: 248 LNDEKFKKISIP-----FGGDEPYVGVYNGTLYLTLCCEDF--DYHVWKMKEDFSWSKEF 307

Query: 304 VIEMPIVHLYYLFWRPHDI----EIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEEL 343
           V+ +P  ++ +   R H I    +++K  EDG +LC+ + + LI YD  T+++E L ++ 
Sbjct: 308 VLALP-ENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQ- 367

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BLAST of Spg001899 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-53
Identity = 144/383 (37.60%), Postives = 207/383 (54.05%), Query Frame = 0


Query: 4   ITNINWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPS----FYSFAN 63
           I N   E+PP D+++LIFSKL   NLP CRL+S  WN+L+ +CKF P  S    F++   
Sbjct: 9   IVNKRSELPP-DVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFY 68

Query: 64  ISPHGTLHCIDLHRKHLKEINVLASFTFHPRFSD----IKIVGSYNGLLCFSTSHTKR-- 123
            S H  LHC++   +H + ++ +ASF FHP  S     I I+ S +GL+    +  +R  
Sbjct: 69  SSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRG 128

Query: 124 -----AFVLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNP----------KFLH----- 183
                  VLNP+TNEY +LPT     D     Y YG GF+P           F H     
Sbjct: 129 HRLDLVCVLNPITNEYFKLPTSRSKGD-RVPNYCYGLGFSPTTNQYKLARTHFTHDEFIV 188

Query: 184 ---LFGTSFDKWESISSLPHEINN-DGVYLNGALYWIGRY--------GYENIVVRFDVE 243
               FGTS + W  + S+P+ +N   GVYLNG LYW+G           Y  ++ R D++
Sbjct: 189 DIFAFGTSCE-WTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLK 248

Query: 244 DEKFEEIYVPKVEREMNKDCVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEFVI 303
           DEKFE+I  P        D   I  +N  +YL+F    +   YH WKMEED+SW KEFV+
Sbjct: 249 DEKFEKISFPL----DGGDDPYIAVYNGTLYLTFCCEDF--DYHAWKMEEDFSWSKEFVL 308

Query: 304 EMPIVHLYYLFWRP--HDIEIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEELADDL 343
            +P    + L   P  + +++IK  EDG +LC+ + + LI YD +T+ +E L  +   ++
Sbjct: 309 ALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQ-DFEI 368

[Close]

BLAST of Spg001899 vs. NCBI nr
Match: KGN59660.1 (hypothetical protein Csa_001105 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-51
Identity = 157/409 (38.39%), Postives = 213/409 (52.08%), Query Frame = 0


Query: 13  PDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYS-FANISPHGTLHCIDL 72
           P  I+E I SKL++  L   R + KAWN+++LT K + + S  + FA+I PH  LHCID 
Sbjct: 16  PSHIIETIISKLSVSVLLNLRRVCKAWNNIILTGKLLHLNSKANLFAHIPPHQMLHCIDF 75

Query: 73  HRKHLKE--IN-VLASFTFHPRFSDIKIVGSYNGLLCF------STSHTKRAF------- 132
             K LKE  IN ++ SFTFHP FS  KI+ S NGLLCF      S  H K  F       
Sbjct: 76  DSKTLKEKKINCIVGSFTFHPHFSTFKIINSCNGLLCFVNSKIMSKEHEKIGFELTQPFA 135

Query: 133 -VLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNP-----KFLHL--------------F 192
            +L+P+TNEY+ELP  +      ++ Y +GFG++P     K + L               
Sbjct: 136 IILSPITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSSIRRGLYVADIFTI 195

Query: 193 GT----SFDKWESISSLPHEI---NNDGVYLNGALYWIG--------RYGYENIVVRFDV 252
           GT    S+ KW  +  L       + DGVYLNG+LYW G        R G + +++RFDV
Sbjct: 196 GTFTRGSYGKWSRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGKVVLLRFDV 255

Query: 253 EDEKFEEIYVPK-VEREMNKDCVSIWEFNRHVYLSFFELQYCLG---YHVWK-MEEDYSW 312
           EDEKFE +  P  VE E+ +   +IW FN  +YLS F+     G   +HVWK MEE YSW
Sbjct: 256 EDEKFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSW 315

Query: 313 IK---EFVIEMPIV----------HLYYLFWR----------PHDIEIIKGLEDGKLLCV 341
            K   EFVI  PI           ++ YL +R           +  ++IK  ED K+L +
Sbjct: 316 FKLEQEFVIRQPISNHWSTVALLHYIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFL 375

[Close]

BLAST of Spg001899 vs. NCBI nr
Match: TYK13067.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-50
Identity = 137/383 (35.77%), Postives = 193/383 (50.39%), Query Frame = 0


Query: 8   NWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYSFANISPHGTLH 67
           N E PPD+I+++I SK+ + NL  CRL+ K+WN+LVLTCKF P   F S A   P  TL+
Sbjct: 14  NSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDP-SLFISLAYDCPSRTLY 73

Query: 68  CIDLHRKHLKEINVLASFTFHPRF----SDIKIVGSYNGLLCFSTSHTKRAFV------L 127
           C+D    + + +N + SF+FHP+F    S I I+ + NGLL    S  K   V      L
Sbjct: 74  CVDFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLGIL 133

Query: 128 NPMTNEYIELPTPNVAVDGDFSR-YFYGFGFNPK--------------------FLHLFG 187
           NPMTNEY + P           R Y YG GFNPK                     +  FG
Sbjct: 134 NPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFAFG 193

Query: 188 TSFDKWESISSLPHEINND-GVYLNGALYWIGRY-----GYENIVVRFDVEDEKFEEIYV 247
           +++  W S+  LP  +  D GVY NG LYW+           + + R D+E+E  E+I  
Sbjct: 194 STYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEKISC 253

Query: 248 PKVEREMNKDCVSIWEFNRHVYLSFFELQYCL------GYHVWKMEEDYSWIKEFVIEMP 307
           P+                 H +   F+    L       Y VWKM++++SWIK FVI  P
Sbjct: 254 PQ-------------HLGGHFFFGVFDGTLYLTVSKNNKYQVWKMKDNFSWIKAFVISSP 313

Query: 308 --IVHLYYLF--WRPHDIEIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEELADDLS 344
             + H  +    W    ++ IK  EDGK+LC+++ + LI YD  T+  E L ++ +  + 
Sbjct: 314 RNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ-SVKVE 373

[Close]

BLAST of Spg001899 vs. ExPASy Swiss-Prot
Match: Q8GXC7 (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-09
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 0


Query: 94  IKIVGSYNGLLCFSTSHTKRAFVLNPMTNEYIELPTPNVAVDGDFSR---YFYGFGFNP- 153
           ++IVGS NGL+C S       F+ NP T +   LP        ++ R     YGFGF+  
Sbjct: 163 VEIVGSSNGLVCISPGE-GAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGL 222

Query: 154 ----KFLHLFGTS------------FDKWESISSLPHEINN----DGVYLNGALYWIGRY 212
               K + L  TS             D W  I +L +E N+     GV+ NGA++W+   
Sbjct: 223 TDDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWVFTE 282

[Close]

BLAST of Spg001899 vs. ExPASy Swiss-Prot
Match: Q9SIV7 (F-box protein At2g16450 OS=Arabidopsis thaliana OX=3702 GN=At2g16450 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.4e-06
Identity = 58/194 (29.90%), Postives = 79/194 (40.72%), Query Frame = 0


Query: 81  VLASFTFHPRFS-DIKIVGSYNGLLCFSTSHT------------KRAFVLNPMTNEYIEL 140
           ++A+  FH RFS D  ++  Y  L  FS  +              R  + NP T  Y  L
Sbjct: 91  LVATAEFHVRFSPDNLLICHYYDLKYFSIGYAFGLIYIYGNRGRARPLICNPTTGRYAIL 150

Query: 141 PTPNVAVDGDFSRYFYGFGFNP-----KFLHL-------------FGTSFDKWESIS-SL 200
           P         + + F  FGF+P     K L +             FG    KW  I  SL
Sbjct: 151 PNRYT-----YRKAFSFFGFDPIDKQYKALSMVYPSGPGHSRVITFGAGDLKWRRIKCSL 210

Query: 201 PHEINNDGVYLNGALYWIG-------------RYGYENIVVRFDVEDEKFEEIYVPKVER 227
            H+I ++GV +NG LY++G               GY  ++V FDV  EKF  I V +  R
Sbjct: 211 RHDIKSEGVCINGVLYYLGDTSDWSRVNGNHVTSGY--MIVCFDVRSEKFTFIDVKRFCR 270

[Close]

BLAST of Spg001899 vs. ExPASy Swiss-Prot
Match: Q9C627 (Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.5e-05
Identity = 54/232 (23.28%), Postives = 95/232 (40.95%), Query Frame = 0


Query: 13  PDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFV--------PIPSFYSFANISPHG 72
           P D++  I S+L + ++ +CRL+SK W  ++ +  F         P P            
Sbjct: 25  PIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDFTESFLIKSPPRPRLLFTIRYGSKW 84

Query: 73  TLHCIDLHRKHLKEINVLASFTFHPRFS------DIKIVGSY---NGLLCFSTSHTKRAF 132
            L      R   +   V+A+  +H  FS        ++V  +   N  L       + + 
Sbjct: 85  HLFSAPQPRNFDENFPVVAT-DYHKGFSGNWCMQSFQLVNGFIYLNNRLSLKGKIDRVSV 144

Query: 133 VLNPMTNEYIELPTPNVAVDGDFSRYFYGFG-FNPKFLHLFGTSFDK------------- 192
           + NP T +  ++P P++ V    S+ F+G+     +F  L  TS  +             
Sbjct: 145 IWNPSTGQ--QIPLPDLGVKNSHSKSFFGYDPIEKQFKVLCITSSKEHQVLTLGTGRKLS 204

Query: 193 WESIS-SLPH--EINNDGVYLNGALYWIGRYGYENIVVRFDVEDEKFEEIYV 211
           W  I  S PH     ++G+ +NG LY+        ++VRFDV  E+F  + +
Sbjct: 205 WRKIEYSYPHYPRKKSNGICINGVLYY---RNTNAMIVRFDVRSEEFRFVEI 250

[Close]

BLAST of Spg001899 vs. ExPASy Swiss-Prot
Match: Q1KS79 (F-box protein At2g23160 OS=Arabidopsis thaliana OX=3702 GN=At2g23160 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 47/163 (28.83%), Postives = 71/163 (43.56%), Query Frame = 0


Query: 80  NVLASFTFHPRF--SDIKI----------VGSYNGLL-CFSTSHTKRAFVLNPMTNEYIE 139
           +V AS  FH +F  ++++I           G  +GL+  +  S   R+ + NP T EY  
Sbjct: 84  SVAASAKFHVKFPPNNMRIGHNSDRRYFSYGYTSGLIYLYGDSSDDRSVICNPYTGEYAI 143

Query: 140 LP-------TPNVAVDGDFSRYF------YGFGFNPKFLHLFGTSFDKWESI-SSLPHEI 199
           LP       T +  V     + F      Y  G     +   GT   KW +I  SL +EI
Sbjct: 144 LPYLQRYRKTYSFLVFEPIEKQFKILFMAYLSGDRDHKILTVGTGNMKWRTIRCSLRYEI 203

Query: 200 NNDGVYLNGALYWIGRYG----------YENIVVRFDVEDEKF 206
            ++GV +NG LY++G             Y+  +V FD+  EKF
Sbjct: 204 VSEGVSINGVLYYLGETSAWDNKDYDLKYDYAIVCFDIRSEKF 246

[Close]

BLAST of Spg001899 vs. ExPASy Swiss-Prot
Match: Q0V7S0 (F-box protein At1g47340 OS=Arabidopsis thaliana OX=3702 GN=At1g47340 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 36/116 (31.03%), Postives = 52/116 (44.83%), Query Frame = 0


Query: 116 VLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNP-----KFLHL-------------FGT 175
           + NP+T  Y  LP         + + F  FGF+P     K L +             FGT
Sbjct: 170 ICNPLTGRYASLPFLE-----RYRKAFSFFGFDPIEKQYKVLFMAYPSGPDHHTVLTFGT 229

Query: 176 SFDKWESIS-SLPHEINNDGVYLNGALYWIG---RYGYENIVVRFDVEDEKFEEIY 210
               W  I  S+ H+I +DG+ +NG +Y++G    +    +VV FDV  E F  IY
Sbjct: 230 GEMSWRKIECSVKHDIVSDGICINGVMYYLGDTSEFMTAFVVVCFDVRSETFSFIY 280

[Close]

BLAST of Spg001899 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.5e-54
Identity = 143/387 (36.95%), Postives = 213/387 (55.04%), Query Frame = 0


Query: 4   ITNINWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYS--FANI- 63
           I N ++E+PP DI++ IFSK+   NLP CRL+S+ WN+L+ +CKF P  S Y   FA   
Sbjct: 8   IINKSYELPP-DILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFY 67

Query: 64  -SPHGTLHCIDLHRKHLKEINVLASFTFHPRF----SDIKIVGSYNGLLCFSTSHTKR-- 123
            S H  LHC++   +H++ ++++ASF FHP F    S I I+ S +GL+    +  +R  
Sbjct: 68  SSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRG 127

Query: 124 -----AFVLNPMTNEYIELPTPNVAVDGD-FSRYFYGFGFNPK----------FLH---- 183
                  VLNP+TNEY +   PN+ + GD    Y YG GF+PK          F H    
Sbjct: 128 QRRDVVCVLNPITNEYFK--HPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFI 187

Query: 184 ----LFGTSFDKWESISSLPHEINN-DGVYLNGALYWIGRY---------GYENIVVRFD 243
                FGTS + W  I S+P+ +N   GVY NG LYW+G            Y  +V R D
Sbjct: 188 VDIFAFGTSCE-WTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLD 247

Query: 244 VEDEKFEEIYVPKVEREMNKDCVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEF 303
           + DEKF++I +P        D   +  +N  +YL+     +   YHVWKM+ED+SW KEF
Sbjct: 248 LNDEKFKKISIP-----FGGDEPYVGVYNGTLYLTLCCEDF--DYHVWKMKEDFSWSKEF 307

Query: 304 VIEMPIVHLYYLFWRPHDI----EIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEEL 343
           V+ +P  ++ +   R H I    +++K  EDG +LC+ + + LI YD  T+++E L ++ 
Sbjct: 308 VLALP-ENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQ- 367

[Close]

BLAST of Spg001899 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.5e-54
Identity = 143/387 (36.95%), Postives = 213/387 (55.04%), Query Frame = 0


Query: 4   ITNINWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYS--FANI- 63
           I N ++E+PP DI++ IFSK+   NLP CRL+S+ WN+L+ +CKF P  S Y   FA   
Sbjct: 8   IINKSYELPP-DILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFY 67

Query: 64  -SPHGTLHCIDLHRKHLKEINVLASFTFHPRF----SDIKIVGSYNGLLCFSTSHTKR-- 123
            S H  LHC++   +H++ ++++ASF FHP F    S I I+ S +GL+    +  +R  
Sbjct: 68  SSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRG 127

Query: 124 -----AFVLNPMTNEYIELPTPNVAVDGD-FSRYFYGFGFNPK----------FLH---- 183
                  VLNP+TNEY +   PN+ + GD    Y YG GF+PK          F H    
Sbjct: 128 QRRDVVCVLNPITNEYFK--HPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFI 187

Query: 184 ----LFGTSFDKWESISSLPHEINN-DGVYLNGALYWIGRY---------GYENIVVRFD 243
                FGTS + W  I S+P+ +N   GVY NG LYW+G            Y  +V R D
Sbjct: 188 VDIFAFGTSCE-WTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLD 247

Query: 244 VEDEKFEEIYVPKVEREMNKDCVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEF 303
           + DEKF++I +P        D   +  +N  +YL+     +   YHVWKM+ED+SW KEF
Sbjct: 248 LNDEKFKKISIP-----FGGDEPYVGVYNGTLYLTLCCEDF--DYHVWKMKEDFSWSKEF 307

Query: 304 VIEMPIVHLYYLFWRPHDI----EIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEEL 343
           V+ +P  ++ +   R H I    +++K  EDG +LC+ + + LI YD  T+++E L ++ 
Sbjct: 308 VLALP-ENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQ- 367

[Close]

BLAST of Spg001899 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.4e-54
Identity = 144/383 (37.60%), Postives = 207/383 (54.05%), Query Frame = 0


Query: 4   ITNINWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPS----FYSFAN 63
           I N   E+PP D+++LIFSKL   NLP CRL+S  WN+L+ +CKF P  S    F++   
Sbjct: 9   IVNKRSELPP-DVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFY 68

Query: 64  ISPHGTLHCIDLHRKHLKEINVLASFTFHPRFSD----IKIVGSYNGLLCFSTSHTKR-- 123
            S H  LHC++   +H + ++ +ASF FHP  S     I I+ S +GL+    +  +R  
Sbjct: 69  SSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRG 128

Query: 124 -----AFVLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNP----------KFLH----- 183
                  VLNP+TNEY +LPT     D     Y YG GF+P           F H     
Sbjct: 129 HRLDLVCVLNPITNEYFKLPTSRSKGD-RVPNYCYGLGFSPTTNQYKLARTHFTHDEFIV 188

Query: 184 ---LFGTSFDKWESISSLPHEINN-DGVYLNGALYWIGRY--------GYENIVVRFDVE 243
               FGTS + W  + S+P+ +N   GVYLNG LYW+G           Y  ++ R D++
Sbjct: 189 DIFAFGTSCE-WTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLK 248

Query: 244 DEKFEEIYVPKVEREMNKDCVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEFVI 303
           DEKFE+I  P        D   I  +N  +YL+F    +   YH WKMEED+SW KEFV+
Sbjct: 249 DEKFEKISFPL----DGGDDPYIAVYNGTLYLTFCCEDF--DYHAWKMEEDFSWSKEFVL 308

Query: 304 EMPIVHLYYLFWRP--HDIEIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEELADDL 343
            +P    + L   P  + +++IK  EDG +LC+ + + LI YD +T+ +E L  +   ++
Sbjct: 309 ALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQ-DFEI 368

[Close]

BLAST of Spg001899 vs. ExPASy TrEMBL
Match: A0A0A0LCB8 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-51
Identity = 157/409 (38.39%), Postives = 213/409 (52.08%), Query Frame = 0


Query: 13  PDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYS-FANISPHGTLHCIDL 72
           P  I+E I SKL++  L   R + KAWN+++LT K + + S  + FA+I PH  LHCID 
Sbjct: 16  PSHIIETIISKLSVSVLLNLRRVCKAWNNIILTGKLLHLNSKANLFAHIPPHQMLHCIDF 75

Query: 73  HRKHLKE--IN-VLASFTFHPRFSDIKIVGSYNGLLCF------STSHTKRAF------- 132
             K LKE  IN ++ SFTFHP FS  KI+ S NGLLCF      S  H K  F       
Sbjct: 76  DSKTLKEKKINCIVGSFTFHPHFSTFKIINSCNGLLCFVNSKIMSKEHEKIGFELTQPFA 135

Query: 133 -VLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNP-----KFLHL--------------F 192
            +L+P+TNEY+ELP  +      ++ Y +GFG++P     K + L               
Sbjct: 136 IILSPITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSSIRRGLYVADIFTI 195

Query: 193 GT----SFDKWESISSLPHEI---NNDGVYLNGALYWIG--------RYGYENIVVRFDV 252
           GT    S+ KW  +  L       + DGVYLNG+LYW G        R G + +++RFDV
Sbjct: 196 GTFTRGSYGKWSRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGKVVLLRFDV 255

Query: 253 EDEKFEEIYVPK-VEREMNKDCVSIWEFNRHVYLSFFELQYCLG---YHVWK-MEEDYSW 312
           EDEKFE +  P  VE E+ +   +IW FN  +YLS F+     G   +HVWK MEE YSW
Sbjct: 256 EDEKFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSW 315

Query: 313 IK---EFVIEMPIV----------HLYYLFWR----------PHDIEIIKGLEDGKLLCV 341
            K   EFVI  PI           ++ YL +R           +  ++IK  ED K+L +
Sbjct: 316 FKLEQEFVIRQPISNHWSTVALLHYIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFL 375

[Close]

BLAST of Spg001899 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.7e-51
Identity = 137/383 (35.77%), Postives = 193/383 (50.39%), Query Frame = 0


Query: 8   NWEIPPDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFVPIPSFYSFANISPHGTLH 67
           N E PPD+I+++I SK+ + NL  CRL+ K+WN+LVLTCKF P   F S A   P  TL+
Sbjct: 14  NSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDP-SLFISLAYDCPSRTLY 73

Query: 68  CIDLHRKHLKEINVLASFTFHPRF----SDIKIVGSYNGLLCFSTSHTKRAFV------L 127
           C+D    + + +N + SF+FHP+F    S I I+ + NGLL    S  K   V      L
Sbjct: 74  CVDFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLGIL 133

Query: 128 NPMTNEYIELPTPNVAVDGDFSR-YFYGFGFNPK--------------------FLHLFG 187
           NPMTNEY + P           R Y YG GFNPK                     +  FG
Sbjct: 134 NPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFAFG 193

Query: 188 TSFDKWESISSLPHEINND-GVYLNGALYWIGRY-----GYENIVVRFDVEDEKFEEIYV 247
           +++  W S+  LP  +  D GVY NG LYW+           + + R D+E+E  E+I  
Sbjct: 194 STYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEKISC 253

Query: 248 PKVEREMNKDCVSIWEFNRHVYLSFFELQYCL------GYHVWKMEEDYSWIKEFVIEMP 307
           P+                 H +   F+    L       Y VWKM++++SWIK FVI  P
Sbjct: 254 PQ-------------HLGGHFFFGVFDGTLYLTVSKNNKYQVWKMKDNFSWIKAFVISSP 313

Query: 308 --IVHLYYLF--WRPHDIEIIKGLEDGKLLCVVSRMSLISYDANTRKIETLHEELADDLS 344
             + H  +    W    ++ IK  EDGK+LC+++ + LI YD  T+  E L ++ +  + 
Sbjct: 314 RNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ-SVKVE 373

[Close]

BLAST of Spg001899 vs. TAIR 10
Match: AT3G06240.1 (F-box family protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-10
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 0


Query: 94  IKIVGSYNGLLCFSTSHTKRAFVLNPMTNEYIELPTPNVAVDGDFSR---YFYGFGFNP- 153
           ++IVGS NGL+C S       F+ NP T +   LP        ++ R     YGFGF+  
Sbjct: 163 VEIVGSSNGLVCISPGE-GAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGL 222

Query: 154 ----KFLHLFGTS------------FDKWESISSLPHEINN----DGVYLNGALYWIGRY 212
               K + L  TS             D W  I +L +E N+     GV+ NGA++W+   
Sbjct: 223 TDDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWVFTE 282

[Close]

BLAST of Spg001899 vs. TAIR 10
Match: AT2G16450.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 53.5 bits (127), Expect = 3.8e-07
Identity = 58/194 (29.90%), Postives = 79/194 (40.72%), Query Frame = 0


Query: 81  VLASFTFHPRFS-DIKIVGSYNGLLCFSTSHT------------KRAFVLNPMTNEYIEL 140
           ++A+  FH RFS D  ++  Y  L  FS  +              R  + NP T  Y  L
Sbjct: 91  LVATAEFHVRFSPDNLLICHYYDLKYFSIGYAFGLIYIYGNRGRARPLICNPTTGRYAIL 150

Query: 141 PTPNVAVDGDFSRYFYGFGFNP-----KFLHL-------------FGTSFDKWESIS-SL 200
           P         + + F  FGF+P     K L +             FG    KW  I  SL
Sbjct: 151 PNRYT-----YRKAFSFFGFDPIDKQYKALSMVYPSGPGHSRVITFGAGDLKWRRIKCSL 210

Query: 201 PHEINNDGVYLNGALYWIG-------------RYGYENIVVRFDVEDEKFEEIYVPKVER 227
            H+I ++GV +NG LY++G               GY  ++V FDV  EKF  I V +  R
Sbjct: 211 RHDIKSEGVCINGVLYYLGDTSDWSRVNGNHVTSGY--MIVCFDVRSEKFTFIDVKRFCR 270

[Close]

BLAST of Spg001899 vs. TAIR 10
Match: AT1G46984.1 (F-box family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-06
Identity = 54/232 (23.28%), Postives = 95/232 (40.95%), Query Frame = 0


Query: 13  PDDIMELIFSKLAIVNLPVCRLISKAWNHLVLTCKFV--------PIPSFYSFANISPHG 72
           P D++  I S+L + ++ +CRL+SK W  ++ +  F         P P            
Sbjct: 25  PIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDFTESFLIKSPPRPRLLFTIRYGSKW 84

Query: 73  TLHCIDLHRKHLKEINVLASFTFHPRFS------DIKIVGSY---NGLLCFSTSHTKRAF 132
            L      R   +   V+A+  +H  FS        ++V  +   N  L       + + 
Sbjct: 85  HLFSAPQPRNFDENFPVVAT-DYHKGFSGNWCMQSFQLVNGFIYLNNRLSLKGKIDRVSV 144

Query: 133 VLNPMTNEYIELPTPNVAVDGDFSRYFYGFG-FNPKFLHLFGTSFDK------------- 192
           + NP T +  ++P P++ V    S+ F+G+     +F  L  TS  +             
Sbjct: 145 IWNPSTGQ--QIPLPDLGVKNSHSKSFFGYDPIEKQFKVLCITSSKEHQVLTLGTGRKLS 204

Query: 193 WESIS-SLPH--EINNDGVYLNGALYWIGRYGYENIVVRFDVEDEKFEEIYV 211
           W  I  S PH     ++G+ +NG LY+        ++VRFDV  E+F  + +
Sbjct: 205 WRKIEYSYPHYPRKKSNGICINGVLYY---RNTNAMIVRFDVRSEEFRFVEI 250

[Close]

BLAST of Spg001899 vs. TAIR 10
Match: AT2G23160.1 (F-box family protein )

HSP 1 Score: 48.9 bits (115), Expect = 9.4e-06
Identity = 47/163 (28.83%), Postives = 71/163 (43.56%), Query Frame = 0


Query: 80  NVLASFTFHPRF--SDIKI----------VGSYNGLL-CFSTSHTKRAFVLNPMTNEYIE 139
           +V AS  FH +F  ++++I           G  +GL+  +  S   R+ + NP T EY  
Sbjct: 84  SVAASAKFHVKFPPNNMRIGHNSDRRYFSYGYTSGLIYLYGDSSDDRSVICNPYTGEYAI 143

Query: 140 LP-------TPNVAVDGDFSRYF------YGFGFNPKFLHLFGTSFDKWESI-SSLPHEI 199
           LP       T +  V     + F      Y  G     +   GT   KW +I  SL +EI
Sbjct: 144 LPYLQRYRKTYSFLVFEPIEKQFKILFMAYLSGDRDHKILTVGTGNMKWRTIRCSLRYEI 203

Query: 200 NNDGVYLNGALYWIGRYG----------YENIVVRFDVEDEKF 206
            ++GV +NG LY++G             Y+  +V FD+  EKF
Sbjct: 204 VSEGVSINGVLYYLGETSAWDNKDYDLKYDYAIVCFDIRSEKF 246

[Close]

BLAST of Spg001899 vs. TAIR 10
Match: AT1G47340.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 36/116 (31.03%), Postives = 52/116 (44.83%), Query Frame = 0


Query: 116 VLNPMTNEYIELPTPNVAVDGDFSRYFYGFGFNP-----KFLHL-------------FGT 175
           + NP+T  Y  LP         + + F  FGF+P     K L +             FGT
Sbjct: 170 ICNPLTGRYASLPFLE-----RYRKAFSFFGFDPIEKQYKVLFMAYPSGPDHHTVLTFGT 229

Query: 176 SFDKWESIS-SLPHEINNDGVYLNGALYWIG---RYGYENIVVRFDVEDEKFEEIY 210
               W  I  S+ H+I +DG+ +NG +Y++G    +    +VV FDV  E F  IY
Sbjct: 230 GEMSWRKIECSVKHDIVSDGICINGVMYYLGDTSEFMTAFVVVCFDVRSETFSFIY 280

The following BLAST results are available for this feature:

BLAST of Spg001899 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880514.1	3.3e-61	40.16	putative F-box protein At1g46984 [Benincasa hispida]	[more]
XP_008450717.1	1.1e-53	36.95	PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ...	[more]
XP_004135796.1	1.9e-53	37.60	putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot...	[more]
KGN59660.1	2.4e-51	38.39	hypothetical protein Csa_001105 [Cucumis sativus]	[more]
TYK13067.1	1.2e-50	35.77	putative F-box protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg001899 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXC7	5.2e-09	32.64	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g0624...	[more]
Q9SIV7	5.4e-06	29.90	F-box protein At2g16450 OS=Arabidopsis thaliana OX=3702 GN=At2g16450 PE=2 SV=1	[more]
Q9C627	3.5e-05	23.28	Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE...	[more]
Q1KS79	1.3e-04	28.83	F-box protein At2g23160 OS=Arabidopsis thaliana OX=3702 GN=At2g23160 PE=2 SV=1	[more]
Q0V7S0	3.0e-04	31.03	F-box protein At1g47340 OS=Arabidopsis thaliana OX=3702 GN=At1g47340 PE=2 SV=1	[more]

BLAST of Spg001899 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIX9	5.5e-54	36.95	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BQV8	5.5e-54	36.95	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV...	[more]
A0A0A0M1M5	9.4e-54	37.60	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ...	[more]
A0A0A0LCB8	1.2e-51	38.39	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 ...	[more]
A0A5D3CM94	5.7e-51	35.77	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]

BLAST of Spg001899 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06240.1	3.7e-10	32.64	F-box family protein	[more]
AT2G16450.1	3.8e-07	29.90	F-box and associated interaction domains-containing protein	[more]
AT1G46984.1	2.5e-06	23.28	F-box family protein	[more]
AT2G23160.1	9.4e-06	28.83	F-box family protein	[more]
AT1G47340.1	2.1e-05	31.03	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 13..48 e-value: 1.9E-4 score: 21.2
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 156..267 e-value: 2.1E-13 score: 48.1
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 176..261 e-value: 5.8E-6 score: 26.3
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 16..266
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 16..266
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 13..49
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 63..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001899.1	Spg001899.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding