Spg001896 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001896
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNase H domain-containing protein
Location	scaffold10: 4431840 .. 4439533 (+)
RNA-Seq Expression	Spg001896
Synteny	Spg001896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATTCTCCCTTCAGGACACTTGTGACAGCCTCAATATGCCGACAGGAAACAAAGACTCCAAGGATGAAATAGTCTGGCACCTCGACAAGAAAGGCATATTTATCGTGTAGAGCGCATATCGCCTAGCTACAAGAGACCTCTCCTTTAAGGAAGCTTCGCAATCTAACTCTAGCAAGGAAGCATCCTTCTAGAACAACCTATGGAAAGCAAATGTTCTCCCTAGATCCAAAGTGTGTATATGGAGAATCATCAACGACATCATCCCTACTAAAGCAAACATCCTAAAAAAAGGGAGTTGTCCTCAATCCCCTCTGTAATTTTTGCAAGAAAAAAAGGAATCAACATCCCACATTATATGGGTTTGCAAGCTATCTAGAGCTTTGTGGTTTTCTTTGGTTCCCGGTTCCCTAAATATGTTTTCTTTGTGCAGGGAGAATTGGTTGCCTAAAGATTATTGGGGATGGATGGAAGAAAATCTAAGCATGGAGGAATTGGCTAAAAGCATCATTCTCATGTGGAAGTTATGGGACTTCAGAAACAGAGCAGAGGTTCACAATCATCCAGCAGCAGTTAAGATCATCCATCAAAGCATTGAAGCAAGTCTAAAAGAATGGGAAACTTCTTACCTCAAGACCCATTCTCCGATTAGGCCGAGGAACCCTACGAGTCAAGTGCTTTGGGAGAAACCGCCGCCAAACTCCTGGAAATTAAATTTTGACGCTGCCTGGAATGAGAAAGAAGGTCGAGGAGGTCTTGGCTGGCTCGTGCGTGACTCAGATGGATCCTTGATCTGTTTCGGCATGAAACAAATTAGCAAAAAATGGGCTATAAAGAATCTGGAAGCGTGTGCCATGCTAGAAGGGATCAAGCAAGTGGCTAATACCTGTAATCGGCTTGGCATCCCTCTGGAAGTGGAATCGGACGCGATTGAGGTCGTCAACGTCCTCAACGGGAAGTCGGAAGACATCTCTGATCTGCAGATATTCATCGATGAAATCAAAGATCTTCCTGCCCGTGCTCATTCCATGTATTTCCGTCATTGTAATCGTCTTTTGAACATAGCCGCCTACTGTGTTGCGAGAAGCGCTGCCAGCTACAGCCCTTCGTCTCTGGTGGGATTTGGCTAGAGCGTGCCTTCTTCGCGGGAAAGGGGAGTTTTTTTTGGGCTCCCAATTTGCCATTGTGGATTTTCCCTCTCATTTATGAGGGTAGGTGTAATGGACTCCCTTATTATTAATGATATTCTTTTCTGTTTCAAAAAAAAAAAAAAAAAATCTTGTATCTAGTAGACTTGTGAATTTAAAAAAAAAATGTTAAATAGGTCAAGGACTTAATAGACACAAAATTGAAAGTTAAGGAACCTATTGGACACAAAAGTAAAAATTTAAGGACTTATTGGATATTTTTTAAAGTTCAAGGACTTATTGAACACAAAATTGAAAGTTTGAGGACCTATTTGAAATTTTTTAAAGTTCAGGGACCAAATTGACACAATCTTGCAAGTTTAAGAACTAAACTTGTAATTTAAGCTTAAAAATAAGTTATTTTAGTCCATGGATTTTTGGGACTTATTTCATTTACTCGAAAATTTTAAAAAAAAATCTCTCTTTTAGTCCTTAAACTTGAAAAAGAAAAACAATCATTTTAGTCCATCAACCTTAAACAAGAAACTTTTTTGGCTCTTAATGTAAATGTAAACAATTTAATGCATATATTCAAAGCCAAACTATCCTTATGTTTACCATCTCACTGAGCGTAGCTTAGTGGTTAAAACATCTCTACCTTCTCTAAAAAGTTGTAGATCCAAAATTCTCATCCCCACATGTGATGTAATATTCCACATGTGATATTCTTAAAAGTAACTACAAATAATTTTTATAGTTGAGAAACTAAAATAAACGTTTTGAAAGTTAAGAGATCAAATGGAAAAATTTTGAAAGTTGAGAAACTTGTTATAGGTAAATTTGGACAACTCCGAATAACGAGGAACTGACAGAGCCAACGCAGCACCAACCCGGAACACAACCAAGAGCCAAACCACCGGGTAAGTAGAGGGCCGAGGGAGTTGGACCTGTAAGGATGAAAGTCCTAGCGTAACGGAAGAGTATCGAAGGATCTCACTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTGTATACTTATTTCAATAAAGTGTTATTGAGTTCCTACAATAAAGTGTTATTGTTAAATATTGCACAATTTGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTATATGTAACTTGAACTAGTATGTGGGGACATACGGGGATCGGTGTTCAAGTAACAACCTAAAAGGTCTATAGTATAGGGATAAGGTTGGGTACCTTATCCTGATAACACTATGTGATACGGCCCACTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTCAACCATTAGTTATAACACCGTTAACTAGTTAGGTTACTGTTTCAATAGGATGACCTAGGTAACTCAGTCTTAATCTTGAGTGTGTCATGAACTCCTTCTCATGAGGGATTGTCCTTTGATTAGCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAGGAGAAGTAGATGAGTGTTCCCTTAAGTGGTGACTCCGGGACTTGAACAAAGGGATCCCGTCCTCTCACTGGCCCGAGAGGAACTTTCTTTTTAATGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCGCTGGTACTTAAGGAGACAGATGTAACACAGGGGTAAAACGGTAATTTGACCCAACTGTAGTTACGAACAGTTGTGAAGGATTGACTTACCGGTATAGGTCTATATCCGTGGACACAGAAATGTTCTACAGTGAGAAGAGTTCAGTTGTGGGTCTTTAGTGGAATGACCCACAGTTAATGAATATTGGTTAACCTGATTAATGAGTTTAATCGGTTAACCTCATATCATTGGAGCTTCTGATCTGTAGGTCCATTATGTCCCCCTGCTAGCTCGTAAAGAGTAATTAGGAACAATTATATCTTGAGAGAATTTGAATAGTTCAAATTCATATTGGGAATTAAGTTAATTGTATGAGATACAAATTAATATAATGTATAATGATACATTAAAATATAAAGTATAATTTGAAATTAAACTTTATTATTATGAGAGAAATAAATATTTGAAGAAGTTCAAATATCAATATGAATTTGATTCATATTAAATTTATAGGATATAAGAGAATTGGAAGGAGTTCCAATTTTAATATGAATTTGATTCATATTATAGAATTAATTAATTGAAGGTCTGAAATTAAATATATGATATTTAATTGGGTAATTAATTAATTAACTAATAGAAGGTCTGAAATTAAATATATGATATTTAATTGGTGATTAATTAATTTAAAGAATTAATTAATTGGAAATTAATCAATTATGAAAATGATTAATCACTTATGGAAGTAATTAATCATTTATGGAAATGATTTAATCACTTATGGAAGTGATCAATCATTTATAGAAAAGATTAATCAATTATGGAATTGATTGGTTATGGAATTGATTAATTATGGAAAAGATTAAATCAATTATGGAAATAATTGATTTTAAATGAATATTTTATTCATGGCCTTTCTCCTATAAATAGAACACTAACCCTAGGGTTTATGTGATACAAGAACATATGGCCACCATAAGGTCCTCTCATATTCTCTCAACTCAAGAACTCTAGGGAGAATTTTCTCTCTAGAGTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCCTAATCTCAGAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATGTCCGTTGAAGTATTCAGAGTCGTCAACGGAGGTATGTTTCTCACCGCTTAACCTTTTGCCAATGCATTGGTATTTTAGTAGAAACAAAATTAACTACGAACGGTCCAATTGCTTCCGCTGTAACGGAATTGAGAATTCCAATCCTTCACTCACACCGTATATTAATCAATATTAAGATACCGATACGAAAGGCAAAAACACAACTTTTATCATACATAAAGCTGTTGCAAATAGGTGTAAAACATGCTGGAAAAACATAAAATAAAAACCTATTTTATTCACATGCTTTTCCAAAGAGAATAGAAAGAACCGTTACAAACCTTCGTTGTAGACTTGAACGATTCTATCCAACACCGCTTTTATGTTGAAAACGCAGTAGCCACAAAGTTTCTTCGCTGGAACTTTTCTTCTCCAAAAACACACTACCACTAAGGTTACACTGGTATAACTCTAGATCTAGGAGACAATGGACTGATGGGAGTCTCCCTATAAGAGGGAGACTTGACAGAATACAAGAATGAACCTTCAGTCTTGTCTTGTGTAATGTGTGTCTTCTAGACTCCTAAACCTTAGGTTTCGTGTTCTATTTATAGAAAAAAGACCATGAATAAAATATTCACAAATAATCAATTATTTCCATAATTGATTAATCATTTCCATAATTGATTAAACATTTCCATAAATGATTAATCATTTCCATAATTGATTAATTACTCAATTAATTAATTCTATAATTAATTAACTACCCAGTTAATTAATTCTAATTAACTGCCCAATTAAATATCATATATTTAATTTCAGGTCTTCTATTAATTAATTAATTAATTAATTATCCAATTAAACATCATATATTTAATTTCAGGCCTTCAATTAATTAATTCTATAATATGAATCAAATTCATATTAAAATTTGAACTCCTTCAAATTCTCTTATATCTTATAAATTTAATATGAATCAAATTCATATTAATATTTGAACTTCTTCAAATATTTATTTCTCTCATAATTTATCATAATGCATCACCTTACATTATATTGTTTCCCTTAGTAAATTGAACATCTTCAATTCACATTTATGACTTAGTTGCCTCAAATTACTTTACGAGCTACCAGTGGGACCTAATGGACCTGCAAATCAGAAGCTCCAACGATATGAGATTAATTGGTTAAACTCAGTAACCAAATTAATCATTATTCATTAATTGTATGTACATTCCACTATAGACTCACAGTTGCACTCTTCTTGCAGACATATTTCTATGTCCACGGATATAGACCAATAACAACAAGTTAGTCCTTCACGAGTGTCCATAACACCAGCTGGGTCAAATTATCGTTTTACCCCTGGGTTGCCTCTATGTCCTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTGTGGTCCAACCACTAAATAGAAAACCCTCTCGTGCCAATGAGAGTGTAGGACCCTTTGTTCAAGACTCGGAGACGCCACTTAAGGAAACACTCATCTGCTTCCTTAAAGTCAGGAAGGAGTGAATTTCATCTTGTGTGAATATGTTCTCAGCTCCTCATTCGGTCTTGTCCCCAAAATGATAGGCTTATTAAGTCGGCGTATTGGCCACTCTCACCCATACAAATCAAAGGAACAATCCCTCATGAACAGGAGTCTATAACCCACTCAGGATTGAAACTAAGTTGTCTAGGTCGTCCTAGTGAAATAGAAACCTAACTAATTAATAGTGTTATAACAAGCGGTTACTATTTTGCGGTCTGGTTTTATGCAAACTCATTGCATAGGATACCATCACTCGCATGTCCCTTACACGAACGCATTAGATCATGGAGTTTGTATCATATCCAAAGTGGGTCGTATACATAGTGTCCCTAGGATAAGGCACCCAGTCTTATCCCTATATTATAGACCCTTTAGGCTGTATCTTGAACAATGATCCTCGTATGTCTCTACATACAGTTCAAGACTCATCTCACAGCCTAGGATGTCTAGTTTATTGGATTAGGGTTATTTAGGCAAAGACAAACATAATGCAAATAATAATACTTAATAGAATAATACATCAATATCATTTTATTAATATTCGATCAGTCGCTACATTTACTACCTACGAGTTTTAGGGCATAAAACCCAACAGGACCGAAGCTCAATCCCTAACCTCGCCCTGGTTGAGGCCGACCAGGCCGAGTTTTCTCCCCTTCGCTCGTTTCTTGGTTCCCATGGCCATCCCATTTTGACTTGGTTCAGCCCCGAAATCATCTTAAAACACGTAAAACCCTAAAAAAAGAAAAAGGTATATAAACTCTTCTTCAACCTTGGAGAAAGGATCTGAAAAACTATATTTCTTTGAACTCTTTACTCTTCCTCTAGCTCTCTTATTTGGCTTCTCATCTATCTCTTTGTTGACTTAAGCATCGAAGGCAGTGTGGCAAACACCACTCTGGTGTGCAGTTTTTGCTGGTTTTGCAAGTCCCGTCTTCCCCGCTTTCTATAAATTCATTGTTGGTGTCATGTGAAGGTCAGGTGAGTCTTCTGTCCGGATTCTGGCATCAACAAAACTAATATAAACATGGTTAATTTACAAGTTCGGTCTTTAACTTTCAAGTTTGTGGCAAATAGGTTTCTGAACTTTAAAAATGGTTTAATATGTATTTGAACTTTTAATTTTGTGTCTAATAGATTCATGAACTTTCAAAAGTGTTTAATAAGTCTCTAAACTTTCAATTATGTGTCTAATAAGTTTTTGAGCTTTCACTTTTCTGTCTAAAAATCATTGACCTATTCGATACTTTTTTAAAATTTGTAAACCTTTTGGACACAAAATTGAAAGTTTTTAATGTCTATTATAGACACAAAATTCAATTTTATGTGTAAGAAATTCATTAATTAAAAAATATTGAATATGTCATGTATCTATTTAGATAAACAAAATTGAAAGTTTGAGGATATATTTGACATTTTTTAAGTTGGATCAATCAAATATATATAAAATTAAGGGCAAAATACACTTTTGGTCCCTGAGGTTTGAGGTTGATGTTTATTTGGTCTCCGAGGTTTCAAAAGATACACTTTAGTCCCTGAAGTTTGGAAAATAGTTTTAAATGGCCCTGTTCACACGAGATTTTCGAAGAGAAAATTTAATTCGTGGAAAACGACTTCTTGTATATATTGATTTCTATGTAAGTAATTGTGGAATACAATCTCTAGTTACAATCCTTTGATGTTTTCTCTCAAGGTAACTTTGATCTACAAAGTCTTCAAGAAACTTTAATCTTCAGAGTCTTGAAGGTTTGTTCACCTTTGAAGGATTCTCCTGGATGATTGAAGTAGACTTCTGGCTTCAGGTCTTCAGTCAGTCTTTTAGATGACTTCACTTCAATCTTCAAGCTTGTAGGAAAATCTAGGTTTTGGTCTTCAAAGTCTTGTAGGAGGATTGGAGCTTCAATCTTCAGGATCTTGCAGAGAGCTTCAATCTTCTAAATCTTGTAGAGGCTTTAGTCTTCAGAGTCTTGCAGAAGTTTTTCTGAATCTTGCAGAGGCTTCAGTCTTCAGAGTCTTGCAGGAAGCTTCAAGCTTTTGAATTTTGCAGAAGCTTCAATCTTCGGAGTCTTGCAGCAGGATCTGGACTTCAATCTTCAAGATTTTTGCAGGAGGAACGAGGCTTCAATCTTCAAGTCTTGTAG

mRNA sequence

ATGGAAGAATTCTCCCTTCAGGACACTTGTGACAGCCTCAATATGCCGACAGGAAACAAAGACTCCAAGGATGAAATAGTCTGGCACCTCGACAAGAAAGGCATATTTATCGTGGAGAATTGGTTGCCTAAAGATTATTGGGGATGGATGGAAGAAAATCTAAGCATGGAGGAATTGGCTAAAAGCATCATTCTCATGTGGAAGTTATGGGACTTCAGAAACAGAGCAGAGGTTCACAATCATCCAGCAGCAGTTAAGATCATCCATCAAAGCATTGAAGCAAGTCTAAAAGAATGGGAAACTTCTTACCTCAAGACCCATTCTCCGATTAGGCCGAGGAACCCTACGAGTCAAGTGCTTTGGGAGAAACCGCCGCCAAACTCCTGGAAATTAAATTTTGACGCTGCCTGGAATGAGAAAGAAGGTCGAGGAGGTCTTGGCTGGCTCGTGCGTGACTCAGATGGATCCTTGATCTGTTTCGGCATGAAACAAATTAGCAAAAAATGGGCTATAAAGAATCTGGAAGCGTGTGCCATGCTAGAAGGGATCAAGCAAGTGGCTAATACCTGTAATCGGCTTGGCATCCCTCTGGAAGTGGAATCGGACGCGATTGAGGTCGTCAACGTCCTCAACGGGAAGTCGGAAGACATCTCTGATCTGCAGATATTCATCGATGAAATCAAAGATCTTCCTGCCCGTGCTCATTCCATGTATTTCCGTCATTGTAATCGTCTTTTGAACATAGCCGCCTACTGTGTTGCGAGAAGCGCTGCCAGCTACAGCCCTTCACGTATTGATCCAAGGCGTCCATCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAGGAGAAGTAGATGAGTGTCCATTATGTCCCCCTGCTAGCTCAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATGTCCGTTGAAGTATTCAGAGTCGTCAACGGAGCATCGAAGGCAGTGTGGCAAACACCACTCTGGTGTGCAGTTTTTGCTGGTTTTGCAAGTCCCGTCTTCCCCGCTTTCTATAAATTCATTGTTGGTGTCATGTGAAGGTCAGAGTCTTGAAGGTTTGTTCACCTTTGAAGGATTCTCCTGGATGATTGAAGTAGACTTCTGGCTTCAGAGGCTTCAGTCTTCAGAGTCTTGCAGGAAGCTTCAAGCTTTTGAATTTTGCAGAAGCTTCAATCTTCGGAGTCTTGCAGCAGGATCTGGACTTCAATCTTCAAGATTTTTGCAGGAGGAACGAGGCTTCAATCTTCAAGTCTTGTAG

Coding sequence (CDS)

ATGGAAGAATTCTCCCTTCAGGACACTTGTGACAGCCTCAATATGCCGACAGGAAACAAAGACTCCAAGGATGAAATAGTCTGGCACCTCGACAAGAAAGGCATATTTATCGTGGAGAATTGGTTGCCTAAAGATTATTGGGGATGGATGGAAGAAAATCTAAGCATGGAGGAATTGGCTAAAAGCATCATTCTCATGTGGAAGTTATGGGACTTCAGAAACAGAGCAGAGGTTCACAATCATCCAGCAGCAGTTAAGATCATCCATCAAAGCATTGAAGCAAGTCTAAAAGAATGGGAAACTTCTTACCTCAAGACCCATTCTCCGATTAGGCCGAGGAACCCTACGAGTCAAGTGCTTTGGGAGAAACCGCCGCCAAACTCCTGGAAATTAAATTTTGACGCTGCCTGGAATGAGAAAGAAGGTCGAGGAGGTCTTGGCTGGCTCGTGCGTGACTCAGATGGATCCTTGATCTGTTTCGGCATGAAACAAATTAGCAAAAAATGGGCTATAAAGAATCTGGAAGCGTGTGCCATGCTAGAAGGGATCAAGCAAGTGGCTAATACCTGTAATCGGCTTGGCATCCCTCTGGAAGTGGAATCGGACGCGATTGAGGTCGTCAACGTCCTCAACGGGAAGTCGGAAGACATCTCTGATCTGCAGATATTCATCGATGAAATCAAAGATCTTCCTGCCCGTGCTCATTCCATGTATTTCCGTCATTGTAATCGTCTTTTGAACATAGCCGCCTACTGTGTTGCGAGAAGCGCTGCCAGCTACAGCCCTTCACGTATTGATCCAAGGCGTCCATCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAGGAGAAGTAGATGAGTGTCCATTATGTCCCCCTGCTAGCTCAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATGTCCGTTGAAGTATTCAGAGTCGTCAACGGAGCATCGAAGGCAGTGTGGCAAACACCACTCTGGTGTGCAGTTTTTGCTGGTTTTGCAAGTCCCGTCTTCCCCGCTTTCTATAAATTCATTGTTGGTGTCATGTGAAGGTCAGAGTCTTGAAGGTTTGTTCACCTTTGAAGGATTCTCCTGGATGATTGAAGTAGACTTCTGGCTTCAGAGGCTTCAGTCTTCAGAGTCTTGCAGGAAGCTTCAAGCTTTTGAATTTTGCAGAAGCTTCAATCTTCGGAGTCTTGCAGCAGGATCTGGACTTCAATCTTCAAGATTTTTGCAGGAGGAACGAGGCTTCAATCTTCAAGTCTTGTAG

Protein sequence

MEEFSLQDTCDSLNMPTGNKDSKDEIVWHLDKKGIFIVENWLPKDYWGWMEENLSMEELAKSIILMWKLWDFRNRAEVHNHPAAVKIIHQSIEASLKEWETSYLKTHSPIRPRNPTSQVLWEKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEGIKQVANTCNRLGIPLEVESDAIEVVNVLNGKSEDISDLQIFIDEIKDLPARAHSMYFRHCNRLLNIAAYCVARSAASYSPSRIDPRRPSWVRVANTPTQYAFLFGDKTEWEAGDMTTQEGIHSFPLLGEVDECPLCPPASSVIAGKIKWWCSSLLQSNQESCPLKYSESSTEHRRQCGKHHSGVQFLLVLQVPSSPLSINSLLVSCEGQSLEGLFTFEGFSWMIEVDFWLQRLQSSESCRKLQAFEFCRSFNLRSLAAGSGLQSSRFLQEERGFNLQVL

Homology

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BLAST of Spg001896 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-20
Identity = 68/222 (30.63%), Postives = 116/222 (52.25%), Query Frame = 0


Query: 50  MEENLSMEELAKSIILMWKLWDFRN----RAEVHNHPAAVKIIHQSIEASLKEWETSYLK 109
           M +  S E+L   +I  W +W+ RN    R E  +    ++ + + +  S  + ETS   
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 110 THSPIRPRNPTSQVLWEKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQI 169
            H  +      +++ WE PP + W LN DA+W++   RGG+GW++R  DG ++  G + +
Sbjct: 61  LHKTL-----NNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFV 120

Query: 170 SKKWAIKNLEACAMLEGIKQVANTCNRLGI--PLEVESDAIEVVNVLNGKSEDISDLQIF 229
                +K LEA A+LEG++ + N    LG+  PL +E+D+ EV ++LN K ED++     
Sbjct: 121 EACNNVKLLEASAILEGLRNLTN----LGVLRPLHIETDSAEVESLLNRKREDLTKTGWV 180

Query: 230 IDEIKDLPARAHSMYFRHCNRLLNIAAYCVARSAASYSPSRI 266
           ++EI +L      + F    R  N  A+ +A+ A+    S I
Sbjct: 181 VEEILNLRDSCEILAFAKVGRETNGCAHSLAQRASVLRESMI 213

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BLAST of Spg001896 vs. NCBI nr
Match: XP_024041966.1 (uncharacterized protein LOC112099096 [Citrus clementina])

HSP 1 Score: 107.5 bits (267), Expect = 3.2e-19
Identity = 81/253 (32.02%), Postives = 132/253 (52.17%), Query Frame = 0


Query: 13  LNMPTGNKDSKDEIVWHLDKKGIFIVENWLPKDYWGWMEENLSMEELAKSIILMWKLWDF 72
           + +P   +  +D+++WH DKKG  IV  WL +    W +++  +E  A+   L+W +W+ 
Sbjct: 1   MQIPLPKRPKEDQLIWHYDKKGCDIV--WLLQ---FWPQQHAKVEG-AEVAALLWAIWNA 60

Query: 73  RNR---AEVHNHPAAVKIIHQSIEASLK---EWETSYLKTHSPIRPRNPTSQVLWEKPPP 132
           RN+        +P  V    ++I  S K   + E +Y KT      RN   Q  W  PPP
Sbjct: 61  RNKWLFEGKQENPLRVVANAEAIVESFKKIRQLEIAY-KT-----KRNAERQKQW-SPPP 120

Query: 133 NSW-KLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEGIKQ 192
           N W K+N DAA + +    GLG +VRDSDG+     +K +    ++   EA AM  G+ Q
Sbjct: 121 NGWQKVNVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEATAMEWGL-Q 180

Query: 193 VANTCNRLGIPLEV-ESDAIEVVNVLNGKSEDISDLQIFIDEIKDLPARAHSMYFRHCNR 252
           VA   N   I   + ESD++EV++++N KS  ++++   I +I++      +   +HC R
Sbjct: 181 VAEKAN---ITFRIFESDSLEVIDLINKKSSSLTEIGWLISDIQENLQNFQNFKAQHCPR 236

Query: 253 LLNIAAYCVARSA 258
             N AA+ +A+ A
Sbjct: 241 DCNYAAHSLAKLA 236

[Close]

BLAST of Spg001896 vs. NCBI nr
Match: XP_015381032.1 (uncharacterized protein LOC107174551 [Citrus sinensis])

HSP 1 Score: 105.9 bits (263), Expect = 9.4e-19
Identity = 82/261 (31.42%), Postives = 133/261 (50.96%), Query Frame = 0


Query: 13  LNMPTGNKDSKDEIVWHLDKKGIFIVENWLPKDYWGWMEENLSMEELAKSIILMWKLWDF 72
           + +P   +  +D+++WH DKKG  IV  WL +    W +++  +E  A+   L+W +W+ 
Sbjct: 1   MQIPLPKRPKEDQLIWHYDKKGCDIV--WLLQ---FWPQQHAKVEG-AEVAALLWAIWNA 60

Query: 73  RNR---AEVHNHPAAVKIIHQSIEASLK---EWETSYLKTHSPIR--------PRNPTSQ 132
           RN+        +P  V    ++I  S K   + E +Y KT   IR          N   Q
Sbjct: 61  RNKWLFEGKQENPLRVVANAEAIVESFKKIRQLEIAY-KTKQKIRQPEMVYKTKGNAERQ 120

Query: 133 VLWEKPPPNSW-KLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEAC 192
             W  PPPN W K+N DAA + +    GLG +VRDSDG+     +K +    ++   EA 
Sbjct: 121 KQW-SPPPNGWQKVNVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEAT 180

Query: 193 AMLEGIKQVANTCNRLGIPLEV-ESDAIEVVNVLNGKSEDISDLQIFIDEIKDLPARAHS 252
           AM  G+ QVA   N   I   + ESD++EV++++N KS  ++++   I +I++      +
Sbjct: 181 AMEWGL-QVAEKAN---ITFRIFESDSLEVIDLINKKSSSLTEIGWLISDIQENLQNFQN 240

Query: 253 MYFRHCNRLLNIAAYCVARSA 258
              +HC R  N AA+ +A+ A
Sbjct: 241 FKAQHCPRDCNYAAHSLAKLA 249

[Close]

BLAST of Spg001896 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-18
Identity = 61/190 (32.11%), Postives = 101/190 (53.16%), Query Frame = 0


Query: 40  NWLPKDYWGWMEENLSMEELAKSIILMWKLWDFRNRA--------EVHNHPAAVKIIHQS 99
           +W  KD W W+   LS EE+A S+++ W++W+ RNR+        E     + V  I+ +
Sbjct: 12  HWTNKDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSN 71

Query: 100 IEASLKEWETSYLKTHSPIRPRNPTS----QVLWEKPPPNSWKLNFDAAWNEKEGRGGLG 159
           I+      +T   + +    PR   +     V W  PP N WKLN DA+W+E+   GG+G
Sbjct: 72  IDKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIG 131

Query: 160 WLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEGIKQVANTCNRLGIPLEVESDAIEVV 218
           W++ D  G ++  G  +I +K  I  LE   ++ G+ Q  N  +R   P+ +ESD++EV+
Sbjct: 132 WILCDCRGEIVLAGNCKIREKKEINALELMTIIRGL-QFINMQSR--SPIYLESDSVEVI 191

[Close]

BLAST of Spg001896 vs. NCBI nr
Match: XP_022154991.1 (uncharacterized protein LOC111022134 isoform X2 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-18
Identity = 59/204 (28.92%), Postives = 100/204 (49.02%), Query Frame = 0


Query: 28  WHLDKKGIFIVE--------------NWLPKDYWGWMEENLSMEELAKSIILMWKLWDFR 87
           W  DK  + + E              NW  K+YW W+ +    EE  +S+I+  ++W+ R
Sbjct: 107 WFFDKSMVMLEEPRANCNFNELEFRTNWTTKEYWEWLMDKAGEEERRRSMIIACQIWEMR 166

Query: 88  NRAEVHNHPAAVKIIHQSIEASL--KEWETSYLKTHS----PIRPRNPTSQVLWEKPPPN 147
           N++      +  + I  +I+  +     + + LK  S    PIR     ++  W+ P  N
Sbjct: 167 NKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSN 226

Query: 148 SWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEGIKQVA 207
           SWKLN DAAW       G+GW++RD  G +I  G + I  +  I  LE  A+ EG++ + 
Sbjct: 227 SWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIR 286

Query: 208 NTCNRLGIPLEVESDAIEVVNVLN 212
               R   P+ +ESD++E +++L+
Sbjct: 287 QEHCR---PIHLESDSLEAIHLLH 307

[Close]

BLAST of Spg001896 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-20
Identity = 68/222 (30.63%), Postives = 116/222 (52.25%), Query Frame = 0


Query: 50  MEENLSMEELAKSIILMWKLWDFRN----RAEVHNHPAAVKIIHQSIEASLKEWETSYLK 109
           M +  S E+L   +I  W +W+ RN    R E  +    ++ + + +  S  + ETS   
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 110 THSPIRPRNPTSQVLWEKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQI 169
            H  +      +++ WE PP + W LN DA+W++   RGG+GW++R  DG ++  G + +
Sbjct: 61  LHKTL-----NNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFV 120

Query: 170 SKKWAIKNLEACAMLEGIKQVANTCNRLGI--PLEVESDAIEVVNVLNGKSEDISDLQIF 229
                +K LEA A+LEG++ + N    LG+  PL +E+D+ EV ++LN K ED++     
Sbjct: 121 EACNNVKLLEASAILEGLRNLTN----LGVLRPLHIETDSAEVESLLNRKREDLTKTGWV 180

Query: 230 IDEIKDLPARAHSMYFRHCNRLLNIAAYCVARSAASYSPSRI 266
           ++EI +L      + F    R  N  A+ +A+ A+    S I
Sbjct: 181 VEEILNLRDSCEILAFAKVGRETNGCAHSLAQRASVLRESMI 213

[Close]

BLAST of Spg001896 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-19
Identity = 61/190 (32.11%), Postives = 101/190 (53.16%), Query Frame = 0


Query: 40  NWLPKDYWGWMEENLSMEELAKSIILMWKLWDFRNRA--------EVHNHPAAVKIIHQS 99
           +W  KD W W+   LS EE+A S+++ W++W+ RNR+        E     + V  I+ +
Sbjct: 12  HWTNKDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSN 71

Query: 100 IEASLKEWETSYLKTHSPIRPRNPTS----QVLWEKPPPNSWKLNFDAAWNEKEGRGGLG 159
           I+      +T   + +    PR   +     V W  PP N WKLN DA+W+E+   GG+G
Sbjct: 72  IDKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIG 131

Query: 160 WLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEGIKQVANTCNRLGIPLEVESDAIEVV 218
           W++ D  G ++  G  +I +K  I  LE   ++ G+ Q  N  +R   P+ +ESD++EV+
Sbjct: 132 WILCDCRGEIVLAGNCKIREKKEINALELMTIIRGL-QFINMQSR--SPIYLESDSVEVI 191

[Close]

BLAST of Spg001896 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 59/204 (28.92%), Postives = 100/204 (49.02%), Query Frame = 0


Query: 28  WHLDKKGIFIVE--------------NWLPKDYWGWMEENLSMEELAKSIILMWKLWDFR 87
           W  DK  + + E              NW  K+YW W+ +    EE  +S+I+  ++W+ R
Sbjct: 107 WFFDKSMVMLEEPRANCNFNELEFRTNWTTKEYWEWLMDKAGEEERRRSMIIACQIWEMR 166

Query: 88  NRAEVHNHPAAVKIIHQSIEASL--KEWETSYLKTHS----PIRPRNPTSQVLWEKPPPN 147
           N++      +  + I  +I+  +     + + LK  S    PIR     ++  W+ P  N
Sbjct: 167 NKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSN 226

Query: 148 SWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEGIKQVA 207
           SWKLN DAAW       G+GW++RD  G +I  G + I  +  I  LE  A+ EG++ + 
Sbjct: 227 SWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIR 286

Query: 208 NTCNRLGIPLEVESDAIEVVNVLN 212
               R   P+ +ESD++E +++L+
Sbjct: 287 QEHCR---PIHLESDSLEAIHLLH 307

[Close]

BLAST of Spg001896 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-18
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = 0


Query: 40  NWLPKDYWGWMEENLSMEELAKSIILMWKLWDFRNRAEVHNHPAAVKIIHQSIEASL--K 99
           NW  K+YW W+ +    EE  +S+I+  ++W+ RN++      +  + I  +I+  +   
Sbjct: 168 NWTTKEYWEWLMDKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINS 227

Query: 100 EWETSYLKTHS----PIRPRNPTSQVLWEKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDS 159
             + + LK  S    PIR     ++  W+ P  NSWKLN DAAW       G+GW++RD 
Sbjct: 228 AGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDE 287

Query: 160 DGSLICFGMKQISKKWAIKNLEACAMLEGIKQVANTCNRLGIPLEVESDAIEVVNVLN 212
            G +I  G + I  +  I  LE  A+ EG++ +     R   P+ +ESD++E +++L+
Sbjct: 288 KGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCR---PIHLESDSLEAIHLLH 342

[Close]

BLAST of Spg001896 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.6e-16
Identity = 60/211 (28.44%), Postives = 106/211 (50.24%), Query Frame = 0


Query: 57  EELAKSIILMWKLWDFRNRAEVHNHPAAVKIIHQSIE----------ASLKEWETSYLKT 116
           EE  +S+I+ W++W+ RN++         + I  +I+           +LK   T+  K 
Sbjct: 7   EERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKSTN--KD 66

Query: 117 HSPIRPRNPTSQVLWEKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQIS 176
              IR     +   W+ P  NSWKLN +AAW      GG+GW++RD  G +I    + I 
Sbjct: 67  LHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIR 126

Query: 177 KKWAIKNLEACAMLEGIKQVANTCNRLGIPLEVESDAIEVVNVLNGKSEDISDLQIFIDE 236
            +  I  LE  A+ EG++ +     R   P+ +ESD++E +++L+ + +D +++   ++E
Sbjct: 127 AERNITYLEVMAICEGLRAIRQEHCR---PIHLESDSLEAIHLLHRQCQDQTEIIWLLEE 186

Query: 237 IKDLPARAHSMYFRHCNRLLNIAAYCVARSA 258
           I  +      +  RH +R  N  A+ +AR A
Sbjct: 187 IWQMMKDMEIVSMRHISREANKVAHGLARRA 212

[Close]

BLAST of Spg001896 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-12
Identity = 63/220 (28.64%), Postives = 102/220 (46.36%), Query Frame = 0


Query: 65  LMWKLWDFRNRAEVHNHP-AAVKIIHQSIEASLKEWETSYL---KTHSPIRPRNPTSQVL 124
           L+W+LW  RN          A +++ +++E   +EW T      K   P   RN + Q  
Sbjct: 80  LLWRLWKSRNELMFKGKEYDAPEVLRRAME-DFEEWSTRRELEGKASGPQVERNLSVQ-- 139

Query: 125 WEKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAML 184
           W+ PP    K N DA W  +  R G+GW++R+  G ++  G + + +   +   E    L
Sbjct: 140 WKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE----L 199

Query: 185 EGIKQVANTCNRLGIP-LEVESDAIEVVNVLNGKSEDI-SDLQIFIDEIKDLPARAHSMY 244
           E ++    T +R     +  ESDA  +VN+LN  S+D    LQ  +++I+ L      + 
Sbjct: 200 EALRWAVLTMSRFNYKRIIFESDAQALVNLLN--SDDFWPTLQPALEDIQQLLHHFEEVK 259

Query: 245 FRHCNRLLNIAAYCVARSAASYSPSRIDPRR----PSWVR 275
           F    R  N  A  +AR + S+  S  DP+     P W+R
Sbjct: 260 FEFTPRGGNKVADRIARESISF--SNYDPKLFSIVPQWLR 288

[Close]

BLAST of Spg001896 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 5.3e-12
Identity = 59/217 (27.19%), Postives = 98/217 (45.16%), Query Frame = 0


Query: 65  LMWKLWDFRNRAEVHNHPAAVKIIHQSIEASLKEWETSYLKTHSPIRPR-NPTSQVLWEK 124
           L+W+LW  RN           + + +  E  L+EW           +P+ N +S   W +
Sbjct: 363 LLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRW-R 422

Query: 125 PPPNSW-KLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEG 184
           PPP+ W K N DA WN    R G+GW++R+  G +   G + + K  ++   E    LE 
Sbjct: 423 PPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAE----LEA 482

Query: 185 IKQVANTCNRLGIPLEV-ESDAIEVVNVLNGKSEDISDLQIFIDEIKDLPARAHSMYFRH 244
           ++    + +R      + ESD+  ++ +LN   E    L+  I +++ L ++   + F  
Sbjct: 483 MRWAVLSLSRFQYNYVIFESDSQVLIEILN-NDEIWPSLKPTIQDLQRLLSQFTEVKFVF 542

Query: 245 CNRLLNIAAYCVARSAASYSPSRIDPRR----PSWVR 275
             R  N  A  VAR + S+     DP+     PSW R
Sbjct: 543 IPREGNTLAERVARESLSF--LNYDPKLYSIVPSWAR 571

[Close]

BLAST of Spg001896 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-10
Identity = 51/200 (25.50%), Postives = 93/200 (46.50%), Query Frame = 0


Query: 65  LMWKLWDFRNRAEVHNHPAAVKIIHQSIEASLKEW---ETSYLKTHSPIRPRNPTSQVLW 124
           L+W++W  RN    +    +      S +A   +W     S+ KT SP R +   +++ W
Sbjct: 268 LIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTR-QIAENKIEW 327

Query: 125 EKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAMLE 184
             PP    K NFDA ++ ++     GW++R+  G+ I +G  +++        E  A+L 
Sbjct: 328 RNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLA 387

Query: 185 GIKQVANTCNRLGIPLEVESDAIEVVNVLNGKSEDISDLQIFIDEIKDLPARAHSMYFRH 244
            ++Q   T  R    + +E D   ++N++NG S   S L   +++I     +  S+ F  
Sbjct: 388 ALQQ---TWIRGYTQVFMEGDCQTLINLINGISFH-SSLANHLEDISFWANKFASIQFGF 447

Query: 245 CNRLLNIAAYCVARSAASYS 262
             R  N  A+ +A+   +YS
Sbjct: 448 IRRKGNKLAHVLAKYGCTYS 462

[Close]

BLAST of Spg001896 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 8.5e-10
Identity = 53/198 (26.77%), Postives = 89/198 (44.95%), Query Frame = 0


Query: 65  LMWKLWDFRNRAEVHNHPAAVKIIHQSIEASL---KEWETSYLKTHSPIRPRN--PTSQV 124
           LMW++W   N   V NH         ++E +L   KEW  + +        RN  P+   
Sbjct: 47  LMWRIWKSGNDL-VFNHTRTK--FQTTVEMALNDTKEWLDNTMTNEQQNGNRNADPSRNT 106

Query: 125 LWEKPPPNSWKLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAM 184
            W  P  +  K N+DA+ +E+    GLGW++R+S G++I  GM +   +   +  E   +
Sbjct: 107 KWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTL 166

Query: 185 LEGIKQVANTCNRLGIPLEVESDAIEVVNVLNGKSEDISDLQIFIDEIKDLPARAHSMYF 244
           +  I+      ++  I    E D   +  ++N KS +   LQ F+D I+       S+ F
Sbjct: 167 IWAIQASYGFGHKKVI---FEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEF 226

Query: 245 RHCNRLLNIAAYCVARSA 258
              +R  N  A  +A+ A
Sbjct: 227 SFKHREQNGCADFLAKQA 237

[Close]

BLAST of Spg001896 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.1e-04
Identity = 37/133 (27.82%), Postives = 62/133 (46.62%), Query Frame = 0


Query: 130 KLNFDAAWNEKEGRGGLGWLVRDSDGSLICFGMKQISKKWAIKNLEACAMLEGIKQVANT 189
           K N+DA+ +E +   GLGWL+R+S G+++  GM +   +   +  E  A++  I+     
Sbjct: 49  KCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQ----A 108

Query: 190 CNRLGIPLEV-ESDAIEVVNVLNGKSEDISDLQIFIDEIKDLPARAHSMYFRHCNRLLNI 249
            +  G    + E D   V  ++N KS D   L+ ++D IK       S  F   +R  N 
Sbjct: 109 TSAFGYTKVIFEGDNSNVNRLINTKS-DNPRLKHYLDTIKSWIPSFTSTEFIFTHREQNQ 168

Query: 250 AAYCVARSAASYS 262
            A  + + A   S
Sbjct: 169 CADTLVKKAIKSS 176

The following BLAST results are available for this feature:

BLAST of Spg001896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155262.1	2.2e-20	30.63	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_024041966.1	3.2e-19	32.02	uncharacterized protein LOC112099096 [Citrus clementina]	[more]
XP_015381032.1	9.4e-19	31.42	uncharacterized protein LOC107174551 [Citrus sinensis]	[more]
XP_022143317.1	1.6e-18	32.11	uncharacterized protein LOC111013216 [Momordica charantia]	[more]
XP_022154991.1	2.1e-18	28.92	uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]	[more]

BLAST of Spg001896 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg001896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV9	1.1e-20	30.63	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CQG0	7.7e-19	32.11	uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DQC9	1.0e-18	28.92	uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DL64	2.3e-18	30.90	uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CP26	3.6e-16	28.44	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Spg001896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34320.1	3.1e-12	28.64	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT4G29090.1	5.3e-12	27.19	Ribonuclease H-like superfamily protein	[more]
AT3G09510.1	5.0e-10	25.50	Ribonuclease H-like superfamily protein	[more]
AT5G65005.1	8.5e-10	26.77	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G52990.1	3.1e-04	27.82	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 132..257 e-value: 3.0E-17 score: 62.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 128..262 e-value: 9.0E-11 score: 43.8
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 101..260
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 131..255 e-value: 4.15768E-14 score: 66.5688
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 128..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001896.1	Spg001896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity