Spg001732 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTGTAATGAAAGTTTACTTGGAATTGTTGAAGCAAGGCCTCTCCATATGGACAGCGCAGTAGCTACAAATGATTTCTTGGCGAGATTATCTCTTGGAGCCATCAAGCAGTCTGGTCCAAGCCCCGGCGGCGATGGCCACAAGTTCACTGATGTCGATACTCTTGGTGGTATCAAGGACTCCGGCCTGAGCCCTGGCGTCGGCCACAGCCTAATCACCGACCAACGCCCTTGA ATGATGTGTAATGAAAGTTTACTTGGAATTGTTGAAGCAAGGCCTCTCCATATGGACAGCGCAGTAGCTACAAATGATTTCTTGGCGAGATTATCTCTTGGAGCCATCAAGCAGTCTGGTCCAAGCCCCGGCGGCGATGGCCACAAGTTCACTGATGTCGATACTCTTGGTGGTATCAAGGACTCCGGCCTGAGCCCTGGCGTCGGCCACAGCCTAATCACCGACCAACGCCCTTGA ATGATGTGTAATGAAAGTTTACTTGGAATTGTTGAAGCAAGGCCTCTCCATATGGACAGCGCAGTAGCTACAAATGATTTCTTGGCGAGATTATCTCTTGGAGCCATCAAGCAGTCTGGTCCAAGCCCCGGCGGCGATGGCCACAAGTTCACTGATGTCGATACTCTTGGTGGTATCAAGGACTCCGGCCTGAGCCCTGGCGTCGGCCACAGCCTAATCACCGACCAACGCCCTTGA MMCNESLLGIVEARPLHMDSAVATNDFLARLSLGAIKQSGPSPGGDGHKFTDVDTLGGIKDSGLSPGVGHSLITDQRP Homology
BLAST of Spg001732 vs. NCBI nr
Match: KAG6595008.1 (PAMP-induced secreted peptide 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027036.1 hypothetical protein SDJN02_11045, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 95.9 bits (237), Expect = 1.6e-16 Identity = 49/68 (72.06%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Spg001732 vs. NCBI nr
Match: KAE8647505.1 (hypothetical protein Csa_003084 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 3.8e-13 Identity = 44/80 (55.00%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Spg001732 vs. NCBI nr
Match: TYK12857.1 (hypothetical protein E5676_scaffold255G004490 [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 3.8e-13 Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Spg001732 vs. NCBI nr
Match: KAF7828678.1 (PAMP-induced secreted peptide 2-like [Senna tora]) HSP 1 Score: 78.2 bits (191), Expect = 3.5e-11 Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of Spg001732 vs. NCBI nr
Match: KAG6571202.1 (hypothetical protein SDJN03_30117, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.0 bits (188), Expect = 7.9e-11 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of Spg001732 vs. ExPASy Swiss-Prot
Match: F4JRC5 (PAMP-induced secreted peptide 2 OS=Arabidopsis thaliana OX=3702 GN=PIP2 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 2.6e-04 Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of Spg001732 vs. ExPASy TrEMBL
Match: A0A5D3CLN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004490 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13 Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Spg001732 vs. ExPASy TrEMBL
Match: A0A0A0KIE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491710 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13 Identity = 44/80 (55.00%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Spg001732 vs. ExPASy TrEMBL
Match: A0A059AZU8 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H02229 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.2e-10 Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Spg001732 vs. ExPASy TrEMBL
Match: V7CCF8 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G239800g PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09 Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Spg001732 vs. ExPASy TrEMBL
Match: A0A059B1H0 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H02237 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09 Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of Spg001732 vs. TAIR 10
Match: AT2G23270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell, root, stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07 Identity = 39/86 (45.35%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of Spg001732 vs. TAIR 10
Match: AT4G37290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED DURING: LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 1.8e-05 Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of Spg001732 vs. TAIR 10
Match: AT1G49800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; Has 12 Blast hits to 12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04 Identity = 20/38 (52.63%), Postives = 22/38 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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