Spg001700 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001700
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	F-box domain-containing protein
Location	scaffold10: 3724893 .. 3725522 (-)
RNA-Seq Expression	Spg001700
Synteny	Spg001700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATTTGGCCCGAGTTCGAACGAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGGTGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATATTTCGACGTGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATACCATGTGTGGAAGATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCATCGAAACTTTGGAAGATGGGAAGATGTTGTGTATGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAATTAAGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA

mRNA sequence

ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATTTGGCCCGAGTTCGAACGAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGGTGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATATTTCGACGTGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATACCATGTGTGGAAGATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCATCGAAACTTTGGAAGATGGGAAGATGTTGTGTATGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAATTAAGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA

Coding sequence (CDS)

ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATTTGGCCCGAGTTCGAACGAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGGTGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATATTTCGACGTGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATACCATGTGTGGAAGATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCATCGAAACTTTGGAAGATGGGAAGATGTTGTGTATGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAATTAAGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA

Protein sequence

MPFNTVVEEVEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKILAGDV

Homology

[Close]

BLAST of Spg001700 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 151.8 bits (382), Expect = 6.7e-33
Identity = 88/207 (42.51%), Postives = 130/207 (62.80%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWK---SVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFD 69
           VE+FAFG +S EW    SVP+ L       GVY NG L+W+G   +   +   +V+   D
Sbjct: 186 VEIFAFG-TSCEWTPVGSVPYFLN---EYHGVYFNGGLYWVGGQQLP-NAGLSDVIYRLD 245

Query: 70  VEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFV 129
           +E+++FK+ISFP  G D + +   I V++  LYL++   + F YHVWKMEE+  WIKEFV
Sbjct: 246 LEDDKFKQISFPLDG-DDEGDFPYIGVYNDTLYLTLCCGD-FEYHVWKMEEDFSWIKEFV 305

Query: 130 IAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFEL 189
           +A+P      + R++ +    Y +Q+I+  EDG +LC+ + + LILYDPKT  ++ L + 
Sbjct: 306 LALPENVHHSLPRHHPI---GYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQ 365

Query: 190 SDEIKEELWIYQIQSFNFDPLSKILAG 208
             EIK+ +W+YQI SFNF+ L  ILAG
Sbjct: 366 DFEIKKHMWVYQIDSFNFNSLHNILAG 382

[Close]

BLAST of Spg001700 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 3.7e-31
Identity = 84/202 (41.58%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVYFDV 69
           V++FAFG +S EW  V           GVYLNG L+W+G   +     S Y  V+   D+
Sbjct: 186 VDIFAFG-TSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDL 245

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           ++E+F++ISFP  G D       I V++  LYL+ F  E F YH WKMEE+  W KEFV+
Sbjct: 246 KDEKFEKISFPLDGGDDP----YIAVYNGTLYLT-FCCEDFDYHAWKMEEDFSWSKEFVL 305

Query: 130 AMPICRYYDVYWRP--YDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIK 189
           A+P   ++ +   P  Y +Q+I+  EDG +LC+ + + LILYDP T   + L     EIK
Sbjct: 306 ALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIK 365

Query: 190 EELWIYQIQSFNFDPLSKILAG 208
           E +W++QI+SF+F+ L  ILAG
Sbjct: 366 EAMWVHQIESFSFNSLHNILAG 381

[Close]

BLAST of Spg001700 vs. NCBI nr
Match: XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])

HSP 1 Score: 136.0 bits (341), Expect = 3.8e-28
Identity = 83/203 (40.89%), Postives = 119/203 (58.62%), Query Frame = 0


Query: 10  VEVFAFGPS--SNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDV 69
           +E F FG +  S     VP S+ +E  +  VY NG+L+WIG    +      NVL   D+
Sbjct: 190 LETFTFGTNCKSTYVSCVPSSMSME--EHSVYFNGSLYWIG----KQLKHPTNVLYRLDI 249

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           E+E  +EISFPQ+G        +I VF+  LYL++ +     YHVWKMEE+  W K F +
Sbjct: 250 EKEELQEISFPQSG-----GCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDV 309

Query: 130 AMPICRYYDVYWRPYD--VQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIK 189
            +P  + Y  + R YD  +Q+I   +DGK+LC+IS ++LILY+ KT R ++L      IK
Sbjct: 310 LLP--KIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTYQHLNIK 369

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           +   +++I SFNFD L KIL GD
Sbjct: 370 K---VHRIDSFNFDSLHKILTGD 376

[Close]

BLAST of Spg001700 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 4.2e-27
Identity = 78/208 (37.50%), Postives = 120/208 (57.69%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYF 69
           V++FAFG +S EW  +           GVY NG L+W+G      N  L S Y  V+   
Sbjct: 185 VDIFAFG-TSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGL-SDYTGVVYRL 244

Query: 70  DVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEF 129
           D+ +E+FK+IS P  G +       + V++  LYL++   E F YHVWKM+E+  W KEF
Sbjct: 245 DLNDEKFKKISIPFGGDEP-----YVGVYNGTLYLTLC-CEDFDYHVWKMKEDFSWSKEF 304

Query: 130 VIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFE 189
           V+A+P      + R++ +    Y +Q+++  EDG +LC+ + + LI+YDPKT + + L +
Sbjct: 305 VLALPENILHSLHRHHPI---GYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTD 364

Query: 190 LSDEIKEELWIYQIQSFNFDPLSKILAG 208
              EIKE +W +QI+SF+F+ L   L G
Sbjct: 365 QDFEIKEGMWFHQIESFSFNSLHNTLTG 381

[Close]

BLAST of Spg001700 vs. NCBI nr
Match: TYK13067.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 7.2e-27
Identity = 76/203 (37.44%), Postives = 114/203 (56.16%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEE 69
           VE+FAFG +   W SV F   L + D GVY NG L+W+       +SS  + +   D+E 
Sbjct: 186 VEIFAFGSTYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSI-STIYRLDIEN 245

Query: 70  ERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAM 129
           E  ++IS PQ             VFD  LYL++ +     Y VWKM++   WIK FVI+ 
Sbjct: 246 ENLEKISCPQ----HLGGHFFFGVFDGTLYLTVSKNN--KYQVWKMKDNFSWIKAFVISS 305

Query: 130 P--ICR--YYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIK 189
           P  +C   +    W    +  I+  EDGK+LC+++ ++LILYDPKT  ++ L + S +++
Sbjct: 306 PRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 365

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           + L ++ I SFNF+ L  ILAG+
Sbjct: 366 KHLHVHHIDSFNFNSLPNILAGN 381

[Close]

BLAST of Spg001700 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.8e-31
Identity = 84/202 (41.58%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVYFDV 69
           V++FAFG +S EW  V           GVYLNG L+W+G   +     S Y  V+   D+
Sbjct: 186 VDIFAFG-TSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDL 245

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           ++E+F++ISFP  G D       I V++  LYL+ F  E F YH WKMEE+  W KEFV+
Sbjct: 246 KDEKFEKISFPLDGGDDP----YIAVYNGTLYLT-FCCEDFDYHAWKMEEDFSWSKEFVL 305

Query: 130 AMPICRYYDVYWRP--YDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIK 189
           A+P   ++ +   P  Y +Q+I+  EDG +LC+ + + LILYDP T   + L     EIK
Sbjct: 306 ALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIK 365

Query: 190 EELWIYQIQSFNFDPLSKILAG 208
           E +W++QI+SF+F+ L  ILAG
Sbjct: 366 EAMWVHQIESFSFNSLHNILAG 381

[Close]

BLAST of Spg001700 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.9e-28
Identity = 83/203 (40.89%), Postives = 119/203 (58.62%), Query Frame = 0


Query: 10  VEVFAFGPS--SNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDV 69
           +E F FG +  S     VP S+ +E  +  VY NG+L+WIG    +      NVL   D+
Sbjct: 190 LETFTFGTNCKSTYVSCVPSSMSME--EHSVYFNGSLYWIG----KQLKHPTNVLYRLDI 249

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           E+E  +EISFPQ+G        +I VF+  LYL++ +     YHVWKMEE+  W K F +
Sbjct: 250 EKEELQEISFPQSG-----GCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDV 309

Query: 130 AMPICRYYDVYWRPYD--VQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIK 189
            +P  + Y  + R YD  +Q+I   +DGK+LC+IS ++LILY+ KT R ++L      IK
Sbjct: 310 LLP--KIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTYQHLNIK 369

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           +   +++I SFNFD L KIL GD
Sbjct: 370 K---VHRIDSFNFDSLHKILTGD 376

[Close]

BLAST of Spg001700 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 78/208 (37.50%), Postives = 120/208 (57.69%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYF 69
           V++FAFG +S EW  +           GVY NG L+W+G      N  L S Y  V+   
Sbjct: 185 VDIFAFG-TSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGL-SDYTGVVYRL 244

Query: 70  DVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEF 129
           D+ +E+FK+IS P  G +       + V++  LYL++   E F YHVWKM+E+  W KEF
Sbjct: 245 DLNDEKFKKISIPFGGDEP-----YVGVYNGTLYLTLC-CEDFDYHVWKMKEDFSWSKEF 304

Query: 130 VIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFE 189
           V+A+P      + R++ +    Y +Q+++  EDG +LC+ + + LI+YDPKT + + L +
Sbjct: 305 VLALPENILHSLHRHHPI---GYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTD 364

Query: 190 LSDEIKEELWIYQIQSFNFDPLSKILAG 208
              EIKE +W +QI+SF+F+ L   L G
Sbjct: 365 QDFEIKEGMWFHQIESFSFNSLHNTLTG 381

[Close]

BLAST of Spg001700 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 78/208 (37.50%), Postives = 120/208 (57.69%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYF 69
           V++FAFG +S EW  +           GVY NG L+W+G      N  L S Y  V+   
Sbjct: 185 VDIFAFG-TSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGL-SDYTGVVYRL 244

Query: 70  DVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEF 129
           D+ +E+FK+IS P  G +       + V++  LYL++   E F YHVWKM+E+  W KEF
Sbjct: 245 DLNDEKFKKISIPFGGDEP-----YVGVYNGTLYLTLC-CEDFDYHVWKMKEDFSWSKEF 304

Query: 130 VIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFE 189
           V+A+P      + R++ +    Y +Q+++  EDG +LC+ + + LI+YDPKT + + L +
Sbjct: 305 VLALPENILHSLHRHHPI---GYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTD 364

Query: 190 LSDEIKEELWIYQIQSFNFDPLSKILAG 208
              EIKE +W +QI+SF+F+ L   L G
Sbjct: 365 QDFEIKEGMWFHQIESFSFNSLHNTLTG 381

[Close]

BLAST of Spg001700 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27
Identity = 76/203 (37.44%), Postives = 114/203 (56.16%), Query Frame = 0


Query: 10  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEE 69
           VE+FAFG +   W SV F   L + D GVY NG L+W+       +SS  + +   D+E 
Sbjct: 186 VEIFAFGSTYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSI-STIYRLDIEN 245

Query: 70  ERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAM 129
           E  ++IS PQ             VFD  LYL++ +     Y VWKM++   WIK FVI+ 
Sbjct: 246 ENLEKISCPQ----HLGGHFFFGVFDGTLYLTVSKNN--KYQVWKMKDNFSWIKAFVISS 305

Query: 130 P--ICR--YYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIK 189
           P  +C   +    W    +  I+  EDGK+LC+++ ++LILYDPKT  ++ L + S +++
Sbjct: 306 PRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 365

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           + L ++ I SFNF+ L  ILAG+
Sbjct: 366 KHLHVHHIDSFNFNSLPNILAGN 381

[Close]

BLAST of Spg001700 vs. TAIR 10
Match: AT2G23160.1 (F-box family protein )

HSP 1 Score: 45.1 bits (105), Expect = 8.3e-05
Identity = 20/66 (30.30%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 11  EVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNVLVYFD 70
           ++   G  + +W+++  SLR EI  +GV +NG L+++G      N + +  Y   +V FD
Sbjct: 181 KILTVGTGNMKWRTIRCSLRYEIVSEGVSINGVLYYLGETSAWDNKDYDLKYDYAIVCFD 240

Query: 71  VEEERF 73
           +  E+F
Sbjct: 241 IRSEKF 246

The following BLAST results are available for this feature:

BLAST of Spg001700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880514.1	6.7e-33	42.51	putative F-box protein At1g46984 [Benincasa hispida]	[more]
XP_004135796.1	3.7e-31	41.58	putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot...	[more]
XP_022143297.1	3.8e-28	40.89	F-box/kelch-repeat protein At3g06240-like [Momordica charantia]	[more]
XP_008450717.1	4.2e-27	37.50	PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ...	[more]
TYK13067.1	7.2e-27	37.44	putative F-box protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg001700 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg001700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1M5	1.8e-31	41.58	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ...	[more]
A0A6J1CQE2	1.9e-28	40.89	F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A5D3CIX9	2.1e-27	37.50	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BQV8	2.1e-27	37.50	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV...	[more]
A0A5D3CM94	3.5e-27	37.44	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]

BLAST of Spg001700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23160.1	8.3e-05	30.30	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 37..158 e-value: 7.1E-6 score: 26.0
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 7..168 e-value: 2.6E-13 score: 47.8
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 9..143
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 9..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001700.1	Spg001700.1	mRNA