Spg001699 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg001699
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionformimidoyltransferase-cyclodeaminase-like isoform X2
Locationscaffold8: 31903626 .. 31903976 (-)
RNA-Seq ExpressionSpg001699
SyntenySpg001699
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAATTGGTTCTTGCTTGCTGCAAGGTTTACATTTTTAAAAGCAGAAACAAGGCTGCGCTGGAGTCAATTGAACGAGCTGCCAAGCTCTTCCCTGAAGCACCCATCATCAACAAGTTCACGGATGAGGATTACAACAGAGTTGGATATACCCTTGTTTCCAACCTCCTATCCAAGCCATCTGTAAAGTCATGTTCCCTAAGAAGTGCAGTCCTGAACATGGTTGAGGCTGCATTTTTGGCAATTGACTTCGACTCGCAGTGTTCACATGTTAGAAATGATTTTGTTTCTCTCCTCCTAAAAGTAGGAATTGAATCCCAATCCATGCAAAATTTCACAAAGGGTTAA

mRNA sequence

ATGTCAAAATTGGTTCTTGCTTGCTGCAAGGTTTACATTTTTAAAAGCAGAAACAAGGCTGCGCTGGAGTCAATTGAACGAGCTGCCAAGCTCTTCCCTGAAGCACCCATCATCAACAAGTTCACGGATGAGGATTACAACAGAGTTGGATATACCCTTGTTTCCAACCTCCTATCCAAGCCATCTGTAAAGTCATGTTCCCTAAGAAGTGCAGTCCTGAACATGGTTGAGGCTGCATTTTTGGCAATTGACTTCGACTCGCAGTGTTCACATGTTAGAAATGATTTTGTTTCTCTCCTCCTAAAAGTAGGAATTGAATCCCAATCCATGCAAAATTTCACAAAGGGTTAA

Coding sequence (CDS)

ATGTCAAAATTGGTTCTTGCTTGCTGCAAGGTTTACATTTTTAAAAGCAGAAACAAGGCTGCGCTGGAGTCAATTGAACGAGCTGCCAAGCTCTTCCCTGAAGCACCCATCATCAACAAGTTCACGGATGAGGATTACAACAGAGTTGGATATACCCTTGTTTCCAACCTCCTATCCAAGCCATCTGTAAAGTCATGTTCCCTAAGAAGTGCAGTCCTGAACATGGTTGAGGCTGCATTTTTGGCAATTGACTTCGACTCGCAGTGTTCACATGTTAGAAATGATTTTGTTTCTCTCCTCCTAAAAGTAGGAATTGAATCCCAATCCATGCAAAATTTCACAAAGGGTTAA

Protein sequence

MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSKPSVKSCSLRSAVLNMVEAAFLAIDFDSQCSHVRNDFVSLLLKVGIESQSMQNFTKG
Homology
[Close]
BLAST of Spg001699 vs. NCBI nr
Match: XP_023511877.1 (formimidoyltransferase-cyclodeaminase-like [Cucurbita pepo subsp. pepo] >XP_023511878.1 formimidoyltransferase-cyclodeaminase-like [Cucurbita pepo subsp. pepo] >XP_023511879.1 formimidoyltransferase-cyclodeaminase-like [Cucurbita pepo subsp. pepo] >XP_023511880.1 formimidoyltransferase-cyclodeaminase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.7 bits (374), Expect = 3.2e-32
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKLVLACCKVYI +SRNK ALESIERAAKLFP+APIINKFTDE YNRVGYTLVSNL  K
Sbjct: 1  MSKLVLACCKVYISESRNKVALESIERAAKLFPDAPIINKFTDEVYNRVGYTLVSNLPLK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS KSCSLRSAVLNM++AAF +I+FDS C SH R
Sbjct: 61 PSGKSCSLRSAVLNMIKAAFSSINFDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. NCBI nr
Match: XP_022970840.1 (formimidoyltransferase-cyclodeaminase-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 147.9 bits (372), Expect = 5.4e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. NCBI nr
Match: XP_022970841.1 (formimidoyltransferase-cyclodeaminase-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 147.9 bits (372), Expect = 5.4e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. NCBI nr
Match: XP_022970844.1 (formimidoyltransferase-cyclodeaminase-like isoform X5 [Cucurbita maxima])

HSP 1 Score: 147.9 bits (372), Expect = 5.4e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. NCBI nr
Match: XP_022970842.1 (formimidoyltransferase-cyclodeaminase-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 147.9 bits (372), Expect = 5.4e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. ExPASy TrEMBL
Match: A0A6J1I1N7 (formimidoyltransferase-cyclodeaminase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469697 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. ExPASy TrEMBL
Match: A0A6J1I536 (formimidoyltransferase-cyclodeaminase-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111469697 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. ExPASy TrEMBL
Match: A0A6J1I0A4 (formimidoyltransferase-cyclodeaminase-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469697 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. ExPASy TrEMBL
Match: A0A6J1I6U4 (formimidoyltransferase-cyclodeaminase-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111469697 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. ExPASy TrEMBL
Match: A0A6J1I409 (formimidoyltransferase-cyclodeaminase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469697 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          MSKL LACCKVYI +SRNKAALESIE+AAKLFPEAPIINKFT+E YNRVGYTLVS L SK
Sbjct: 1  MSKLALACCKVYISESRNKAALESIEQAAKLFPEAPIINKFTNEVYNRVGYTLVSKLPSK 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
          PS+K CSLRSAVLNMV+AAF AID DS C SH R
Sbjct: 61 PSIKPCSLRSAVLNMVKAAFSAIDLDSHCGSHPR 94

[Close]
BLAST of Spg001699 vs. TAIR 10
Match: AT2G20830.2 (transferases;folic acid binding )

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-17
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0 

Query: 1   MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
           M + +L CCKVYI ++RNK ALE+IERA K FP A I+NKF D  Y RVGYT+VS+L + 
Sbjct: 135 MLREMLGCCKVYISEARNKTALEAIERALKPFPPAAIVNKFEDAAYGRVGYTVVSSLANG 194

Query: 61  PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
               S SL++AV  MV+ A   I+ +  C SH R
Sbjct: 195 ---SSSSLKNAVFAMVKTALDTINLELHCGSHPR 225

[Close]
BLAST of Spg001699 vs. TAIR 10
Match: AT2G20830.1 (transferases;folic acid binding )

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-17
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0 

Query: 1  MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
          M + +L CCKVYI ++RNK ALE+IERA K FP A I+NKF D  Y RVGYT+VS+L + 
Sbjct: 1  MLREMLGCCKVYISEARNKTALEAIERALKPFPPAAIVNKFEDAAYGRVGYTVVSSLANG 60

Query: 61 PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
              S SL++AV  MV+ A   I+ +  C SH R
Sbjct: 61 ---SSSSLKNAVFAMVKTALDTINLELHCGSHPR 91

[Close]
BLAST of Spg001699 vs. TAIR 10
Match: AT2G20830.3 (transferases;folic acid binding )

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-17
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0 

Query: 1   MSKLVLACCKVYIFKSRNKAALESIERAAKLFPEAPIINKFTDEDYNRVGYTLVSNLLSK 60
           M + +L CCKVYI ++RNK ALE+IERA K FP A I+NKF D  Y RVGYT+VS+L + 
Sbjct: 45  MLREMLGCCKVYISEARNKTALEAIERALKPFPPAAIVNKFEDAAYGRVGYTVVSSLANG 104

Query: 61  PSVKSCSLRSAVLNMVEAAFLAIDFDSQC-SHVR 94
               S SL++AV  MV+ A   I+ +  C SH R
Sbjct: 105 ---SSSSLKNAVFAMVKTALDTINLELHCGSHPR 135

The following BLAST results are available for this feature:
BLAST of Spg001699 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023511877.13.2e-3282.98formimidoyltransferase-cyclodeaminase-like [Cucurbita pepo subsp. pepo] >XP_0235... [more]
XP_022970840.15.4e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X1 [Cucurbita maxima][more]
XP_022970841.15.4e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X2 [Cucurbita maxima][more]
XP_022970844.15.4e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X5 [Cucurbita maxima][more]
XP_022970842.15.4e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X3 [Cucurbita maxima][more]
BLAST of Spg001699 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg001699 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I1N72.6e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X2 OS=Cucurbita maxima OX=366... [more]
A0A6J1I5362.6e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X4 OS=Cucurbita maxima OX=366... [more]
A0A6J1I0A42.6e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X3 OS=Cucurbita maxima OX=366... [more]
A0A6J1I6U42.6e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X5 OS=Cucurbita maxima OX=366... [more]
A0A6J1I4092.6e-3282.98formimidoyltransferase-cyclodeaminase-like isoform X1 OS=Cucurbita maxima OX=366... [more]
BLAST of Spg001699 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20830.22.4e-1752.13transferases;folic acid binding [more]
AT2G20830.12.4e-1752.13transferases;folic acid binding [more]
AT2G20830.32.4e-1752.13transferases;folic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012886Formiminotransferase, N-terminal subdomainSMARTSM01222FTCD_N_2coord: 5..116
e-value: 3.5E-4
score: -31.6
IPR012886Formiminotransferase, N-terminal subdomainPFAMPF07837FTCD_Ncoord: 6..89
e-value: 1.1E-16
score: 61.2
IPR037064Formiminotransferase, N-terminal subdomain superfamilyGENE3D3.30.990.10coord: 4..115
e-value: 7.2E-20
score: 73.3
NoneNo IPR availablePANTHERPTHR12234FORMIMINOTRANSFERASE-CYCLODEAMINASEcoord: 1..89
NoneNo IPR availablePANTHERPTHR12234:SF1FORMIMINOTRANSFERASE N-TERMINAL SUBDOMAIN-CONTAINING PROTEINcoord: 1..89
IPR022384Formiminotransferase catalytic domain superfamilySUPERFAMILY55116Formiminotransferase domain of formiminotransferase-cyclodeaminase.coord: 6..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg001699.1Spg001699.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005542 folic acid binding
molecular_function GO:0016740 transferase activity