Spg001690 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTGAAGTAAACAAAACAGAAAGGAAACGCTCAGAGCCAAATTGCTCTTTATTTCTATCATCTTCGTTCTTCGTTCTTCCTCATCTTCAATTTCTCCATTTCCATTTCCATTTCTAAAGAATTATGAGTTACCCTTATGGCTACCACCAGCCTCCGCCTGAAACCTACCCTCCTCCCGGTGAGATCCCTTCTTCTTCTTCTTCTGATTTTCCATTTCCATTTTCATTTCATCTCATTCTTTCTTCTCTTCGTAGGCTACCCTCCGCCGCAGCCTGGATATCCCGGAAATCCTCCCCCGCACCCTGGATATCCCGGCCATCCGCCGCCGCACCAAGGGTATCAAGGCTATTTCTACGATGGGTATCAGCCATCGGCCCCGCCTCCTCCTCCGCCGCCGGGCCCTCCTCCTCCGCCCTATGATTATCACCACCATCACTACGACGATCGAAATGACTGTTCCTCATTCCTTCATGGATGGTTCGTTTTCCCCATTTCTTCAATTCCTGCTCGAATGAACCAATTTTGTTGAGACGCTTTTGATTTGTAAGCTTGACTTCGTGATCTTGTTGCTTGATTCTGTTTTGTGAAATTGGATTGGATTTGAAGAGAGATGCGATGAATATTTGTGGAATTATTTGGATTCCGAATTTAGGAACTCAATTTTCCTTCCCACTGCTTATCAATGAATTTTGACCTTAGTGAAAATTTTGTCTAACAAATGATTGGTAGATCAGTTTAAAGATCAAGGGATGTAATTTAACACTTTCAATTTTGTTTGAATGCACTCTATTGAAGGGCATTTTAGAATCAAAGGGGCTATTATGAACCAGTCATTTTTGTTCTTGTTATCATGAACTAAGCAGTATTTTTCTTTATTTGGTAGGAAAAAAGAAAGGCAAATTGATCGTGTAATGTTTGATTTAGGTGCACAGAGCATCAGATGCTCTACTCTATTAATGCCACTTTATGATCCAATCCTTTTTTCCTCTTTTTTATGTTCCATAGCTTTGATAAAACCATTGAATTGGACTGTCTTTTACTCAAGTTATTATTGATGGAAGAACTTAACAATGTCGTTCGTGCTTTCGGGATTTTCTTGGCACGTAAAAGAGATTGTGGTTCTATGATGGAGGAAGCTCTTTTGAATCCTCCCTTTCGAGATAAGGGCAAAGTTTTTTGGCATGCTTGTTTTTTCGTTTTCTAGTTGGGTATCCGGCTTAAGAGGAACTATAGAATTTTTAGAGGGATTGTGAGGTCCTGAGAACAGGTGTGTGATATTGTTAGATTTTCTCCTCTTTGTGGGTGTTGTTTTTTCACGAGTTTTGTAATTATGAACTAGGTCTTATTCTTTTGGAAAGATTGGAGTTTGTTTTTGCTTAGCTAAACCTCAAACTCCTTTTGAGGCCGGTTATTGTGTATGTCCTTGTATATCTTTTTATTTTTCTCGCCGAAAGCTTGGTCCTCCTTTTGAGGGCTAAGTCATTCTCGCTGTTGTGAGTCCATTATCTCTAATTTTGTTCTGATGCAATATGCAACTTGGTTTTGCATTTTTCTCCTTTATCCATGTCATTACTATGTGTTTTAACGTTCTAGAGAACGAGATAGCTGAAGAAGCCCGCTCTCCTTCGGGCGGGTTCTGTTGGTTTCTTTCCCTTTCTCATTGGGTGGAGGATTTGTTAGAACTTGGATGCTTCCTTTTTGAGTTCTTTGAGGTTTAATGAATGTTCCTTTTTTCAAAAGAAAAAGAACATTTAACAAGTTCACTTTCTAGCTATGGGTAGTTTCTTAGCACTTACCCAAGCTTATGCCATTCTCCTCCCATGGATGCCGAAATATTAGACTAAGTTGATTGATTTTGTAAACAAGTAATCATGGACAACCGAGATTTGTCGTGCCTGAGACGTGTTAAACAACCACGATCACGAGTATATCATAAATTTGAGCATTCGTTGTACGATCCTTCATGTGGCTTTGTTTAGCTTTTACAAAGAAATATGGGGAAGCAAGTATGGATTCATGAAACTTAATGTTATCTGTGATGATAACCTAACCTTGACTAACTG ATGAGTTACCCTTATGGCTACCACCAGCCTCCGCCTGAAACCTACCCTCCTCCCGGCTACCCTCCGCCGCAGCCTGGATATCCCGGAAATCCTCCCCCGCACCCTGGATATCCCGGCCATCCGCCGCCGCACCAAGGGTATCAAGGCTATTTCTACGATGGGTATCAGCCATCGGCCCCGCCTCCTCCTCCGCCGCCGGGCCCTCCTCCTCCGCCCTATGATTATCACCACCATCACTACGACGATCGAAATGACTGTTCCTCATTCCTTCATGGATGGTTCGTTTTCCCCATTTCTTCAATTCCTGCTCGAATGAACCAATTTTGTTGA ATGAGTTACCCTTATGGCTACCACCAGCCTCCGCCTGAAACCTACCCTCCTCCCGGCTACCCTCCGCCGCAGCCTGGATATCCCGGAAATCCTCCCCCGCACCCTGGATATCCCGGCCATCCGCCGCCGCACCAAGGGTATCAAGGCTATTTCTACGATGGGTATCAGCCATCGGCCCCGCCTCCTCCTCCGCCGCCGGGCCCTCCTCCTCCGCCCTATGATTATCACCACCATCACTACGACGATCGAAATGACTGTTCCTCATTCCTTCATGGATGGTTCGTTTTCCCCATTTCTTCAATTCCTGCTCGAATGAACCAATTTTGTTGA MSYPYGYHQPPPETYPPPGYPPPQPGYPGNPPPHPGYPGHPPPHQGYQGYFYDGYQPSAPPPPPPPGPPPPPYDYHHHHYDDRNDCSSFLHGWFVFPISSIPARMNQFC Homology
BLAST of Spg001690 vs. NCBI nr
Match: KAG6581126.1 (hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 143.7 bits (361), Expect = 9.6e-31 Identity = 74/92 (80.43%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of Spg001690 vs. NCBI nr
Match: XP_038879833.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispida]) HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30 Identity = 74/92 (80.43%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Spg001690 vs. NCBI nr
Match: XP_022934109.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022983676.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >XP_023527083.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG7017860.1 hypothetical protein SDJN02_19726 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30 Identity = 73/92 (79.35%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Spg001690 vs. NCBI nr
Match: KAG7022631.1 (hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.5 bits (358), Expect = 2.1e-30 Identity = 71/93 (76.34%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of Spg001690 vs. NCBI nr
Match: TYK27230.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]) HSP 1 Score: 141.7 bits (356), Expect = 3.6e-30 Identity = 73/93 (78.49%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Spg001690 vs. ExPASy TrEMBL
Match: A0A6J1J313 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111482221 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.9e-31 Identity = 73/92 (79.35%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Spg001690 vs. ExPASy TrEMBL
Match: A0A6J1F1N0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111441381 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.9e-31 Identity = 73/92 (79.35%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Spg001690 vs. ExPASy TrEMBL
Match: A0A5A7VHS2 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00060 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30 Identity = 73/93 (78.49%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Spg001690 vs. ExPASy TrEMBL
Match: A0A5D3DVB2 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001150 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30 Identity = 73/93 (78.49%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Spg001690 vs. ExPASy TrEMBL
Match: A0A6J1EL88 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111435344 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 70/92 (76.09%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of Spg001690 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein ) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-08 Identity = 50/112 (44.64%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of Spg001690 vs. TAIR 10
Match: AT1G12810.2 (proline-rich family protein ) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-08 Identity = 50/112 (44.64%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of Spg001690 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 8.1e-04 Identity = 47/98 (47.96%), Postives = 51/98 (52.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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