Spg001531 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001531
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	la-related protein 6C
Location	scaffold8: 36328376 .. 36331777 (-)
RNA-Seq Expression	Spg001531
Synteny	Spg001531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAACCAAGTGTTGAACGAGAGCAGAAGGCAAAATGGAAGGCCACTTGGGCAGAATTCCCACCTCGAAATCGCCAGTCAAATTCGAAACCAACGGCCCTTTGTCACAAAATCCTAGCGTCCTTTCAATCGAGCCTCAGATGCATATATTTGGGCGCGAAATGTGCGTTGATTTTCAGACTTCAGTTACTAAACTTCAGGGCAAATCATTCAGAGAGAGAGAGAGAGCAAGAGAGAGAGAAAGAGACTGAGATTTCAATAACCCACATGCGTTTCGAAACCTACTTCGATTAATCGCAAGTGAAAAAGGGGGAAAGAAGGAATGGCGCAAGCGAATTCAGAAGAGAAGGTGAGTGAGAATCCTGAAATGGAGGTCAAACAAGCTGTGAATGGCGAGGGCAATGCCAATGGCGGTGGCGATGGCAGCAGTAACAGCAGCAATGGTAATCTTGCGTTCAAATTTAATGCCCAAGCGCCTGAGTTTTTCCCAAGATCGCAAACCCAGATGCCTGTTACCGGCTATTTTCATCCCTATTTCCATTTTCTTGGTGGGGCTCCTGCTACTTCAGACTGGTTCTTCATTGGCGATCAAGAACCCACCTACTTGATTCCAAATGCCACCATTCCGCTTCCTAATTTCTCCAAGAATGCTCGTTCTGATGATACTCAGCAAAAAATCGTCAAACAGGTACCCTGTTTTTGTTCTGTTCATGATTCCTTTTTGTCTCTGTTTCTCTTATATTTCATCGTTTGATTCCATTATCCTGCGCTGTGCTCTTCTGGATGATCAATCACTGAACTCAGATTGTCCTTTTCATTGAATGATTTTAATCGCTCTCATTTTTAGTACTCCATTTACATTGGACAAGGTTATGCGTATATTTTGTAGTTCTTTTGGCTCTGAGGCATAATAAAAGAAATTTTCATTTTAGATATTCTTGAGGGATCTTGAATTGTCTAAGACATTTGTTTTCTTTATATGTATGCTTCTTGCTGTTTGGTCAATGTATGAAAGATCTTTAGAACTCTGAACAAGTGAACAGTTTCCCTTTCTTGGTGATCATTGTGCTGTGCTCATAACTAGATCATGTTATTATTAATTTGACTCACTTCAAGACTATCTATAATGTCCATAAGGTACACTTTTCTTTTCCATTAGTTTCTCCTTTGATTCCTTCTTCATTTGTTTGATCTCAGCTTTATGCTTTAAACTCGTCTCTTACTTAAGAGTTTGTTAGTCCCATTTATGTTGTTCGAAGTTGTTTATAAAAAAAATGTTGATCAAAGTTGGAATTTAACCAAGATAGTCACATCATGCCTAGCAAGCTTTTACTCTGCCTTTTCGAGACTCATTCGGTGTAGGGTGCAGTGAGAAAATGTTAATTTTTACATGAGAACTTTTAGCATCTTATAGATGATTTCAATTTTCCAGGTAGAATATCAGTTCAGTGACATGAGTCTTCTTGCAAATGAATCTCTTGCAAAACACATTAGTAAAGATCCCGATGGTTATGGTATGTATAGCCTTTGGAACGTTGTTACATGGATGCATCAATTCAAGTTTTCGATATGCTCTTAACTGAATTCCTTCTTTTTTTTTAATCTTTTTTCATTTCCCTTTATGAAGTTCCGATTTCTGTTATTTCGTCCACCAAGAAAGTAAAGTCCCTCTCAACCAACAACAATTTGATAGTTCAAGCACTCCGCACCTCTTCAAGGCTTGTAAGTTTCTAACTCTAAGTAGAGCACTCCATTTTCTACTCTTGCTGGAAAGATCAGAATAATGATTCTATTTTAGTTTCTCAATTTATCATAACTTATGTTCGATCTTCCGAAGATTGTCAGTGCTGATGGGAAGAAAGTTAGGCGTAAGCATCCGTTCACCGACAAGGACAAAGAGGAATTGCTGGTAAGATCATCCATTGTTCGAATGATGCAGAACATTTCTATTTAGCTGAGCCAGGGACTAATGTTTTGTTCTTGGATTTGCAGTCCCGCACAGTTGTTGTTGAGAATTTGCCTGACAATCACTCGCATCACAACCTTGAGAAAATATTTAGTGTGATCGGAAGGTATGTTCATTGACATTATCTCTCTGTCGTGTTCTTTCTATTAGATGTTGAACTGTCTTCACTGAGCATCATTCATTGTTGATATCTGACCAGTGTGAAGACCATCCGAATCTGCCATCCCCCGGAATCAAATCCCTGCTGCTCTAAAGGTGAATTGTTTATCAGTAACAAGGTATTGTGAATCATGCTTTACTTTAATGTATAACCAAGACATTTATGCTCCAAATCCTCTTCTCATTGTAACTTCATTGGTTTGAAGCTTCATGCACTTGTGGAATACGAGAATGTAGAGTTGGCTGAAAGAGCGGTATGCATATATTGTAAGCTATAACGGATCGAGTTGCTTGTATTTCAATCTTTTCATTGTCTTTCCCTCTTCTTTGTGCCTGCCAGGCTGAGAAGTTAAACGATGAGAGAAACTGGAGGAAAGGGCTCCGAGTAAGGTTGTTGCTCAGACGCTCGGTAAGTGTATAATACAATGATGCAAAGGGTGGAGTTTTGTTTACTCTTGCCTGCATTTTCATTATTTCTATGCTCCTTCTTAGTACAACTCTGATTGTTATTTCTATCTGAATGCAAAAATGGATAGCCGAAATCTGTTCTGAAGACTCGAAAATCGGAATTTGAAAGTATTCTGGATGAAGATGATTCTCAATCTCCTATATCCATCGAACAAGAGTCCTCTCTGCCAAATATCGCTGAACTGATTGTCGATTGCAATGTATGTATATTTGCCGACAACTCTTCGGCCTTGTTTGATGTATTATTAATTTGATCAATAGCTGGTATATATTGTTTTCTTCTGAAAATGATTTGTAATTCCCAAATGACATGAAATATCTGTTTTACTAGTCTGAGGAGAACTCTACAGCATCTAAGAAGGGCTGGGGTCGAGGCCGTGGGAAGGGCCGTGGACGAATTCATGGCCATATCGATCGTAGCTACAGCTTGCCGGTGACAGCTATGCAATCGAGTAGCCAGGTTCTGTGTGAAGCATCGTCCAAACTCACTTCTAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGACGAGGCAAGCCATTAAGCTCAAAACCTGTATTCAATAGGCTTGAATGAATAGAAATGTAGGGAAATCTCTCTTTGATTGTTTAGTAGGGTGGAAGGAACTATGACAATTTTGCTGCTACCTATTCTTTTTTTCTTTTTTGGGTAATAATTGAGATGTTTGATAGGGTTTTTGTTTACTGTATAATGTGGCACTAGCCATCATTCATTCTGAGCAACTTCAATTATTTTTCTAGCTTTTATCTTTCAAAGTGTCTTGCAAAATGTTTGTGTT

mRNA sequence

ATGGCGCAAGCGAATTCAGAAGAGAAGGTGAGTGAGAATCCTGAAATGGAGGTCAAACAAGCTGTGAATGGCGAGGGCAATGCCAATGGCGGTGGCGATGGCAGCAGTAACAGCAGCAATGGTAATCTTGCGTTCAAATTTAATGCCCAAGCGCCTGAGTTTTTCCCAAGATCGCAAACCCAGATGCCTGTTACCGGCTATTTTCATCCCTATTTCCATTTTCTTGGTGGGGCTCCTGCTACTTCAGACTGGTTCTTCATTGGCGATCAAGAACCCACCTACTTGATTCCAAATGCCACCATTCCGCTTCCTAATTTCTCCAAGAATGCTCGTTCTGATGATACTCAGCAAAAAATCGTCAAACAGGTAGAATATCAGTTCAGTGACATGAGTCTTCTTGCAAATGAATCTCTTGCAAAACACATTAGTAAAGATCCCGATGGTTATGTTCCGATTTCTGTTATTTCGTCCACCAAGAAAGTAAAGTCCCTCTCAACCAACAACAATTTGATAGTTCAAGCACTCCGCACCTCTTCAAGGCTTATTGTCAGTGCTGATGGGAAGAAAGTTAGGCGTAAGCATCCGTTCACCGACAAGGACAAAGAGGAATTGCTGTCCCGCACAGTTGTTGTTGAGAATTTGCCTGACAATCACTCGCATCACAACCTTGAGAAAATATTTAGTGTGATCGGAAGTGTGAAGACCATCCGAATCTGCCATCCCCCGGAATCAAATCCCTGCTGCTCTAAAGGTGAATTGTTTATCAGTAACAAGCTTCATGCACTTGTGGAATACGAGAATGTAGAGTTGGCTGAAAGAGCGGCTGAGAAGTTAAACGATGAGAGAAACTGGAGGAAAGGGCTCCGAGTAAGGTTGTTGCTCAGACGCTCGCCGAAATCTGTTCTGAAGACTCGAAAATCGGAATTTGAAAGTATTCTGGATGAAGATGATTCTCAATCTCCTATATCCATCGAACAAGAGTCCTCTCTGCCAAATATCGCTGAACTGATTGTCGATTGCAATTCTGAGGAGAACTCTACAGCATCTAAGAAGGGCTGGGGTCGAGGCCGTGGGAAGGGCCGTGGACGAATTCATGGCCATATCGATCGTAGCTACAGCTTGCCGGTGACAGCTATGCAATCGAGTAGCCAGGTTCTGTGTGAAGCATCGTCCAAACTCACTTCTAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGACGAGGCAAGCCATTAAGCTCAAAACCTGTATTCAATAGGCTTGAATGA

Coding sequence (CDS)

ATGGCGCAAGCGAATTCAGAAGAGAAGGTGAGTGAGAATCCTGAAATGGAGGTCAAACAAGCTGTGAATGGCGAGGGCAATGCCAATGGCGGTGGCGATGGCAGCAGTAACAGCAGCAATGGTAATCTTGCGTTCAAATTTAATGCCCAAGCGCCTGAGTTTTTCCCAAGATCGCAAACCCAGATGCCTGTTACCGGCTATTTTCATCCCTATTTCCATTTTCTTGGTGGGGCTCCTGCTACTTCAGACTGGTTCTTCATTGGCGATCAAGAACCCACCTACTTGATTCCAAATGCCACCATTCCGCTTCCTAATTTCTCCAAGAATGCTCGTTCTGATGATACTCAGCAAAAAATCGTCAAACAGGTAGAATATCAGTTCAGTGACATGAGTCTTCTTGCAAATGAATCTCTTGCAAAACACATTAGTAAAGATCCCGATGGTTATGTTCCGATTTCTGTTATTTCGTCCACCAAGAAAGTAAAGTCCCTCTCAACCAACAACAATTTGATAGTTCAAGCACTCCGCACCTCTTCAAGGCTTATTGTCAGTGCTGATGGGAAGAAAGTTAGGCGTAAGCATCCGTTCACCGACAAGGACAAAGAGGAATTGCTGTCCCGCACAGTTGTTGTTGAGAATTTGCCTGACAATCACTCGCATCACAACCTTGAGAAAATATTTAGTGTGATCGGAAGTGTGAAGACCATCCGAATCTGCCATCCCCCGGAATCAAATCCCTGCTGCTCTAAAGGTGAATTGTTTATCAGTAACAAGCTTCATGCACTTGTGGAATACGAGAATGTAGAGTTGGCTGAAAGAGCGGCTGAGAAGTTAAACGATGAGAGAAACTGGAGGAAAGGGCTCCGAGTAAGGTTGTTGCTCAGACGCTCGCCGAAATCTGTTCTGAAGACTCGAAAATCGGAATTTGAAAGTATTCTGGATGAAGATGATTCTCAATCTCCTATATCCATCGAACAAGAGTCCTCTCTGCCAAATATCGCTGAACTGATTGTCGATTGCAATTCTGAGGAGAACTCTACAGCATCTAAGAAGGGCTGGGGTCGAGGCCGTGGGAAGGGCCGTGGACGAATTCATGGCCATATCGATCGTAGCTACAGCTTGCCGGTGACAGCTATGCAATCGAGTAGCCAGGTTCTGTGTGAAGCATCGTCCAAACTCACTTCTAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGACGAGGCAAGCCATTAAGCTCAAAACCTGTATTCAATAGGCTTGAATGA

Protein sequence

MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQTQMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICHPPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKSVLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKGRGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPVFNRLE

Homology

[Close]

BLAST of Spg001531 vs. NCBI nr
Match: XP_022148536.1 (la-related protein 6C [Momordica charantia])

HSP 1 Score: 753.4 bits (1944), Expect = 1.0e-213
Identity = 389/424 (91.75%), Postives = 402/424 (94.81%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MAQANSEEKVSE PEME K+AVNG GN +G GDG SNSS GNL FKFNAQAPEFFPRSQT
Sbjct: 1   MAQANSEEKVSETPEMETKEAVNGNGNGDGDGDGGSNSS-GNLPFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           Q+PVTGYFHPYFHFLGGAPATSDWFFIGDQEP YLIPNATIPLPNFSKN RSDD QQKIV
Sbjct: 61  QVPVTGYFHPYFHFLGGAPATSDWFFIGDQEPAYLIPNATIPLPNFSKNVRSDDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SSR
Sbjct: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSR 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VS+DGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSSDGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELAERAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEF+SILDEDDS SP+SIE E SL NI ELIVDCNSEENSTASKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFDSILDEDDSPSPVSIE-EPSLSNITELIVDCNSEENSTASKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGRIH H DR  S+PVT +Q+SSQV+CEAS+KLTSKSPRMPDGTKGFTMGRGKPLSSKPV
Sbjct: 361 RGRIHSHSDR--SVPVTQVQASSQVVCEASTKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420

Query: 421 FNRL 425
           FNRL
Sbjct: 421 FNRL 420

[Close]

BLAST of Spg001531 vs. NCBI nr
Match: XP_023007490.1 (la-related protein 6C [Cucurbita maxima])

HSP 1 Score: 746.9 bits (1927), Expect = 9.6e-212
Identity = 383/421 (90.97%), Postives = 402/421 (95.49%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MA+ANSEEKV+ENPEMEVK+AVNG+      G GSSN SNGNL+FKFNAQAPEFFPRSQT
Sbjct: 1   MAEANSEEKVNENPEMEVKEAVNGD------GVGSSN-SNGNLSFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKNARS+D QQKIV
Sbjct: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAK+ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS+
Sbjct: 121 KQVEYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSK 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VSADGKKV+RKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELA+RAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELADRAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEFESILDEDDS SP+SIEQES   NIAELI D +SEENST+SKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFESILDEDDSPSPVSIEQESPQSNIAELITDFSSEENSTSSKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGR+H H+DRSYSLPVTAMQSSSQ+LCEASSKLTSKSPRMPDGTKGFTMGRGKPL+SK V
Sbjct: 361 RGRVHNHLDRSYSLPVTAMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSKSV 414

Query: 421 F 422
           F
Sbjct: 421 F 414

[Close]

BLAST of Spg001531 vs. NCBI nr
Match: XP_023533918.1 (la-related protein 6C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 746.1 bits (1925), Expect = 1.6e-211
Identity = 383/421 (90.97%), Postives = 401/421 (95.25%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MA+ANSEEKV+ENPEMEVK+AVNG+      G GSSN SNGNL+FKFNAQAPEFFPRSQT
Sbjct: 1   MAEANSEEKVNENPEMEVKEAVNGD------GVGSSN-SNGNLSFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKNARS+D QQKIV
Sbjct: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAK+ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS+
Sbjct: 121 KQVEYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSK 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VSADGKKV+RKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELAERAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEFESILDEDDS SP+SIEQES   NIAEL  D +SEENST+SKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFESILDEDDSPSPVSIEQESPQSNIAELTTDFSSEENSTSSKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGR+H H+DRSYSLPVTAMQSSSQ+LCEASSKLTSKSPRMPDGTKGFTMGRGKPL+SK V
Sbjct: 361 RGRVHNHLDRSYSLPVTAMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSKSV 414

Query: 421 F 422
           F
Sbjct: 421 F 414

[Close]

BLAST of Spg001531 vs. NCBI nr
Match: XP_022948148.1 (la-related protein 6C [Cucurbita moschata])

HSP 1 Score: 745.0 bits (1922), Expect = 3.7e-211
Identity = 382/421 (90.74%), Postives = 401/421 (95.25%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MA+ANSEEKV+ENPEM+VK+AVNG+      G GSSN SNGNL+FKFNAQAPEFFPRSQT
Sbjct: 1   MAEANSEEKVNENPEMDVKEAVNGD------GVGSSN-SNGNLSFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKNARS+D QQKIV
Sbjct: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAK+ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS+
Sbjct: 121 KQVEYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSK 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VSADGKKV+RKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELAERAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEFESILDEDDS SP+SIEQES   NIAEL  D +SEENST+SKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFESILDEDDSPSPVSIEQESPQSNIAELTTDFSSEENSTSSKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGR+H H+DRSYSLPVTAMQSSSQ+LCEASSKLTSKSPRMPDGTKGFTMGRGKPL+SK V
Sbjct: 361 RGRVHNHLDRSYSLPVTAMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSKSV 414

Query: 421 F 422
           F
Sbjct: 421 F 414

[Close]

BLAST of Spg001531 vs. NCBI nr
Match: KAG6605122.1 (La-related protein 6C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 744.6 bits (1921), Expect = 4.8e-211
Identity = 382/421 (90.74%), Postives = 401/421 (95.25%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MA+ANSEEKV+ENPEMEVK+AVNG+      G GSSN SNGNL+FKFNAQAPEFFPRSQT
Sbjct: 1   MAEANSEEKVNENPEMEVKEAVNGD------GVGSSN-SNGNLSFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKNARS+D QQKIV
Sbjct: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAK+ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS+
Sbjct: 121 KQVEYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSK 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELAERAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEFESILDEDDS SP+SIEQES   NIAEL  D +SEENST+SKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFESILDEDDSPSPVSIEQESLQSNIAELTTDFSSEENSTSSKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGR+H H+DRSYSLPVTAMQSSSQ+LCEASSKLTSKSPRMPDGTKGFTMGRGKPL+SK +
Sbjct: 361 RGRVHNHLDRSYSLPVTAMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSKSL 414

Query: 421 F 422
           +
Sbjct: 421 Y 414

[Close]

BLAST of Spg001531 vs. ExPASy Swiss-Prot
Match: Q9LHL3 (La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.3e-104
Identity = 227/452 (50.22%), Postives = 293/452 (64.82%), Query Frame = 0


Query: 15  EMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQTQ------MPVTGYF 74
           + E  ++V  E     GG GSS +     AFKFNAQAPEF PRS T        PV+GYF
Sbjct: 5   QREEVESVTTEKKRLDGGGGSSGAQ--ATAFKFNAQAPEFVPRSHTTAPAPQVSPVSGYF 64

Query: 75  HPYFHFLGG-----------------APATSDWFFIGDQEPT------------YLIPNA 134
           +P FH+ GG                    +SDW ++G  +PT            + I N 
Sbjct: 65  YPCFHYNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHDPAAAFYISNP 124

Query: 135 TIPLP------NFSKNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPIS 194
            +  P      + SKN  SDD + KIVKQVEYQF+DMSLLANES++KHISKDP+GYVP+S
Sbjct: 125 AVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVS 184

Query: 195 VISSTKKVKSLSTNNNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVEN 254
            I+STKK+K+L++N++L+  ALR+SS+L+VS DGKKV+R   FTD+D+EEL  RTVV EN
Sbjct: 185 YIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAEN 244

Query: 255 LPDNHSHHNLEKIFSVIGSVKTIRICHPPESNPCCSKGELFISNKLHALVEYENVELAER 314
           LPD+HS+ NLEKIF V+G+VK IRICHPPESN    KG+  +SNK+HAL+EY+N  +A++
Sbjct: 245 LPDDHSYQNLEKIFGVVGNVKAIRICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADK 304

Query: 315 AAEKLNDERNWRKGLRVRLLLRRSPKSVLKTRKSEFESILDEDDSQSPISIEQESSLPNI 374
           A EKLNDERNWRKGLRVRLLLR SPKSVLK R++ F+ IL +D+  S  S E    L ++
Sbjct: 305 AVEKLNDERNWRKGLRVRLLLRCSPKSVLKNRRN-FDGILIDDELPSYESGEDSPRL-HL 364

Query: 375 AELIVDCNSEENSTASKKGWGRGRGKGRGR-----IHGHIDRSY------SLPVTAMQSS 415
            E  +D + ++N+      WG+GRGKGRGR       G   RS+      SL + ++ S 
Sbjct: 365 TESQLDNDGDDNNVGGL--WGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSH 424

[Close]

BLAST of Spg001531 vs. ExPASy Swiss-Prot
Match: O80567 (La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-54
Identity = 141/356 (39.61%), Postives = 192/356 (53.93%), Query Frame = 0


Query: 107 SKNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLST 166
           SK    +D+ QKIV QVEY FSD++L   + L + I KDP+GYVPI V++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 167 NNNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKI 226
           NN+ +   L+ S++L VS DGKKVRR  P T+   EEL SR +V ENLP++H + NL KI
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKI 304

Query: 227 FSVIGSVKTIRICH--------PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKL 286
           FS +GSVK IR C         PP +           SNK+HA VEYE VELAERA  +L
Sbjct: 305 FSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERAVTEL 364

Query: 287 NDERNWRKGLRVRLLLRRSPKSVL----KTRKSEFESILDEDD-----SQSPISIEQ--- 346
           ++  NWR GL+VRL+L+   K       + RK     +  E+D      Q PI  +    
Sbjct: 365 SEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQSDDC 424

Query: 347 --ESSLPNIAELIVDCNSEENSTASKKGWGRGRGKGRGRIHGHIDRSYSLPVTAMQSSS- 406
             E       + I +    E +   +KG  RGRGKGRGR   H +++ +   +  Q+ + 
Sbjct: 425 SGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNH 484

Query: 407 ------------QVLCEASS------------KLTSKSPRMPDGTKGFTMGRGKPL 416
                       QV  + S+            K     PRMPDGT+GF+MGRGKP+
Sbjct: 485 NGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPV 540

[Close]

BLAST of Spg001531 vs. ExPASy Swiss-Prot
Match: Q94A38 (La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-41
Identity = 117/314 (37.26%), Postives = 172/314 (54.78%), Query Frame = 0


Query: 113 DDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIV 172
           D+  QKI++QVEY FSD +L  ++ L   + ++  G+VPIS I++  K+K L+ ++ LIV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 173 QALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGS 232
            AL+ SS L+VSAD KKV+R  P  +    ++   TV+VENLP++HS+ N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPEIRDPKIF--TVLVENLPEDHSNENIREIFGKAGS 220

Query: 233 VKTIRICHP--PESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRV 292
           +K++ IC P   E +    K E FI  +LHA VEYE VE AE+AA  LN+E++WR GLRV
Sbjct: 221 IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRV 280

Query: 293 RLLLRRSPKSVLKTRKSEFESILDEDDSQSPISIE---------QESSLPNIAELIVDCN 352
           +LL + + K     R+     +  E D+   +  +         +E     +       +
Sbjct: 281 KLLEQAAGK--FAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPAD 340

Query: 353 SEENSTASKKGWGRGRGKGRGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMP 412
            +  +    K   +GR  G+GR   H   +     TA  SS               PRMP
Sbjct: 341 DDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMP 400

Query: 413 DGTKGFTMGRGKPL 416
           DGT+GFTMGRGK +
Sbjct: 401 DGTRGFTMGRGKAI 410

[Close]

BLAST of Spg001531 vs. ExPASy Swiss-Prot
Match: Q05CL8 (La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 2.0e-18
Identity = 63/173 (36.42%), Postives = 95/173 (54.91%), Query Frame = 0


Query: 108 KNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTN 167
           K +R       I KQV++ F D +L  ++ L + I K  DGYV IS++ S  K+K L+T+
Sbjct: 21  KRSRVKQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTD 80

Query: 168 NNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIF 227
             LI +AL++SS + +  +G ++RRK P  ++ K+E   RTV VE LP N +H  +E++F
Sbjct: 81  GKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDE-EERTVYVELLPKNVTHSWIERVF 140

Query: 228 SVIGSVKTIRICHPPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLND 281
              G+V  I I H   +             K  A VE+E  E A +A E LN+
Sbjct: 141 GKCGNVVYISIPHYKSTG----------DPKGFAFVEFETKEQAAKAIEFLNN 182

[Close]

BLAST of Spg001531 vs. ExPASy Swiss-Prot
Match: Q4G0J3 (La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-18
Identity = 63/173 (36.42%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 108 KNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTN 167
           K +R       I KQV++ F D +L  +  L + I K  DGYV IS++ S  K+K L+T+
Sbjct: 27  KRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTD 86

Query: 168 NNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIF 227
             LI +ALR+S+ + +  +G ++RRK P  ++ K+E   RTV VE LP N +H  +E++F
Sbjct: 87  GKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDE-DERTVYVELLPKNVNHSWIERVF 146

Query: 228 SVIGSVKTIRICHPPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLND 281
              G+V  I I H   +             K  A VE+E  E A +A E LN+
Sbjct: 147 GKCGNVVYISIPHYKSTG----------DPKGFAFVEFETKEQAAKAIEFLNN 188

[Close]

BLAST of Spg001531 vs. ExPASy TrEMBL
Match: A0A6J1D5P1 (la-related protein 6C OS=Momordica charantia OX=3673 GN=LOC111017163 PE=4 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 5.0e-214
Identity = 389/424 (91.75%), Postives = 402/424 (94.81%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MAQANSEEKVSE PEME K+AVNG GN +G GDG SNSS GNL FKFNAQAPEFFPRSQT
Sbjct: 1   MAQANSEEKVSETPEMETKEAVNGNGNGDGDGDGGSNSS-GNLPFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           Q+PVTGYFHPYFHFLGGAPATSDWFFIGDQEP YLIPNATIPLPNFSKN RSDD QQKIV
Sbjct: 61  QVPVTGYFHPYFHFLGGAPATSDWFFIGDQEPAYLIPNATIPLPNFSKNVRSDDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SSR
Sbjct: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSR 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VS+DGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSSDGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELAERAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEF+SILDEDDS SP+SIE E SL NI ELIVDCNSEENSTASKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFDSILDEDDSPSPVSIE-EPSLSNITELIVDCNSEENSTASKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGRIH H DR  S+PVT +Q+SSQV+CEAS+KLTSKSPRMPDGTKGFTMGRGKPLSSKPV
Sbjct: 361 RGRIHSHSDR--SVPVTQVQASSQVVCEASTKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420

Query: 421 FNRL 425
           FNRL
Sbjct: 421 FNRL 420

[Close]

BLAST of Spg001531 vs. ExPASy TrEMBL
Match: A0A6J1L340 (la-related protein 6C OS=Cucurbita maxima OX=3661 GN=LOC111499965 PE=4 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 4.7e-212
Identity = 383/421 (90.97%), Postives = 402/421 (95.49%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MA+ANSEEKV+ENPEMEVK+AVNG+      G GSSN SNGNL+FKFNAQAPEFFPRSQT
Sbjct: 1   MAEANSEEKVNENPEMEVKEAVNGD------GVGSSN-SNGNLSFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKNARS+D QQKIV
Sbjct: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAK+ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS+
Sbjct: 121 KQVEYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSK 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VSADGKKV+RKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELA+RAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELADRAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEFESILDEDDS SP+SIEQES   NIAELI D +SEENST+SKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFESILDEDDSPSPVSIEQESPQSNIAELITDFSSEENSTSSKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGR+H H+DRSYSLPVTAMQSSSQ+LCEASSKLTSKSPRMPDGTKGFTMGRGKPL+SK V
Sbjct: 361 RGRVHNHLDRSYSLPVTAMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSKSV 414

Query: 421 F 422
           F
Sbjct: 421 F 414

[Close]

BLAST of Spg001531 vs. ExPASy TrEMBL
Match: A0A6J1G8K6 (la-related protein 6C OS=Cucurbita moschata OX=3662 GN=LOC111451813 PE=4 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.8e-211
Identity = 382/421 (90.74%), Postives = 401/421 (95.25%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQT 60
           MA+ANSEEKV+ENPEM+VK+AVNG+      G GSSN SNGNL+FKFNAQAPEFFPRSQT
Sbjct: 1   MAEANSEEKVNENPEMDVKEAVNGD------GVGSSN-SNGNLSFKFNAQAPEFFPRSQT 60

Query: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKIV 120
           QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKNARS+D QQKIV
Sbjct: 61  QMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIV 120

Query: 121 KQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSSR 180
           KQVEYQFSDMSLLANESLAK+ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS+
Sbjct: 121 KQVEYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSK 180

Query: 181 LIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240
           L+VSADGKKV+RKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH
Sbjct: 181 LVVSADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICH 240

Query: 241 PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300
           PPESNPCCSKGELFISNKLHALVEYE VELAERAAEKLNDERNWRKGLRVRLLLRRSPKS
Sbjct: 241 PPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPKS 300

Query: 301 VLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGKG 360
           VLKTRKSEFESILDEDDS SP+SIEQES   NIAEL  D +SEENST+SKKGWGRGRGKG
Sbjct: 301 VLKTRKSEFESILDEDDSPSPVSIEQESPQSNIAELTTDFSSEENSTSSKKGWGRGRGKG 360

Query: 361 RGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPV 420
           RGR+H H+DRSYSLPVTAMQSSSQ+LCEASSKLTSKSPRMPDGTKGFTMGRGKPL+SK V
Sbjct: 361 RGRVHNHLDRSYSLPVTAMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSKSV 414

Query: 421 F 422
           F
Sbjct: 421 F 414

[Close]

BLAST of Spg001531 vs. ExPASy TrEMBL
Match: A0A6J1L529 (la-related protein 6C-like OS=Cucurbita maxima OX=3661 GN=LOC111499964 PE=4 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 5.5e-205
Identity = 371/422 (87.91%), Postives = 395/422 (93.60%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEME-VKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQ 60
           MA+AN E+KV+ NPEME VKQAVNG+      G GSS +SNG+L+FKFNAQAPEFFPRSQ
Sbjct: 1   MAEANPEKKVNSNPEMEVVKQAVNGD-----AGVGSS-TSNGDLSFKFNAQAPEFFPRSQ 60

Query: 61  TQMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKI 120
           TQMPV+GYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKN RSDD  QK+
Sbjct: 61  TQMPVSGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNPRSDDIHQKL 120

Query: 121 VKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSS 180
           +KQVEYQFSDMSLLANESLAK ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS
Sbjct: 121 IKQVEYQFSDMSLLANESLAKSISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSS 180

Query: 181 RLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRIC 240
           +L+VSADGKKV+RKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKT+RIC
Sbjct: 181 KLVVSADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTVRIC 240

Query: 241 HPPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPK 300
           HPPESNPCCSKGELFISNKLHALVEYE  ELAERAAEKLNDERNWRKGLRVRLLLRRSPK
Sbjct: 241 HPPESNPCCSKGELFISNKLHALVEYETAELAERAAEKLNDERNWRKGLRVRLLLRRSPK 300

Query: 301 SVLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGK 360
           SVLKTRKS+F+ ILDEDDS S +S EQESSLPNI ELI DC+SEENST++KKGWGRGRGK
Sbjct: 301 SVLKTRKSDFDCILDEDDSPSTVSTEQESSLPNITELINDCSSEENSTSAKKGWGRGRGK 360

Query: 361 GRGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKP 420
           GRGRIH H+DRS SLPV AMQSSSQV+CEASSKLT+KSPRMPDGTKGFTMGRGKPLSSKP
Sbjct: 361 GRGRIHSHLDRSCSLPVAAMQSSSQVVCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKP 416

Query: 421 VF 422
           VF
Sbjct: 421 VF 416

[Close]

BLAST of Spg001531 vs. ExPASy TrEMBL
Match: A0A6J1G8M9 (la-related protein 6C-like OS=Cucurbita moschata OX=3662 GN=LOC111451873 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 9.4e-205
Identity = 372/422 (88.15%), Postives = 395/422 (93.60%), Query Frame = 0


Query: 1   MAQANSEEKVSENPEME-VKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQ 60
           MA++N E+KV+ NPEME VKQAVNG+      G GSS +SNG+L+FKFNAQAPEFFPRSQ
Sbjct: 1   MAESNPEKKVNPNPEMEVVKQAVNGD-----AGVGSS-TSNGDLSFKFNAQAPEFFPRSQ 60

Query: 61  TQMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNATIPLPNFSKNARSDDTQQKI 120
           TQMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPN TIPLPNFSKN RSDD  QK+
Sbjct: 61  TQMPVTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNPRSDDIHQKL 120

Query: 121 VKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRTSS 180
           VKQVEYQFSDMSLLANESLAK ISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALR+SS
Sbjct: 121 VKQVEYQFSDMSLLANESLAKSISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSS 180

Query: 181 RLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRIC 240
           +L+VSADGKKV+RKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKT+RIC
Sbjct: 181 KLVVSADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTVRIC 240

Query: 241 HPPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRVRLLLRRSPK 300
           HPPESNPCCSKGELFISNKLHALVEYE  ELAERAAEKLNDERNWRKGLRVRLLLRRSPK
Sbjct: 241 HPPESNPCCSKGELFISNKLHALVEYEIAELAERAAEKLNDERNWRKGLRVRLLLRRSPK 300

Query: 301 SVLKTRKSEFESILDEDDSQSPISIEQESSLPNIAELIVDCNSEENSTASKKGWGRGRGK 360
           SVLKTRKS+F+ ILDEDDS S +S EQESSLPNI ELI DC+SEENST++KKGWGRGRGK
Sbjct: 301 SVLKTRKSDFDCILDEDDSPSTVSTEQESSLPNITELINDCSSEENSTSAKKGWGRGRGK 360

Query: 361 GRGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKP 420
           GRGRIH H+DRS SLPV AMQSSSQV+CEASSKLT+KSPRMPDGTKGFTMGRGKPLSSKP
Sbjct: 361 GRGRIHSHLDRSCSLPVAAMQSSSQVVCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKP 416

Query: 421 VF 422
           VF
Sbjct: 421 VF 416

[Close]

BLAST of Spg001531 vs. TAIR 10
Match: AT3G19090.1 (RNA-binding protein )

HSP 1 Score: 379.4 bits (973), Expect = 3.8e-105
Identity = 227/452 (50.22%), Postives = 293/452 (64.82%), Query Frame = 0


Query: 15  EMEVKQAVNGEGNANGGGDGSSNSSNGNLAFKFNAQAPEFFPRSQTQ------MPVTGYF 74
           + E  ++V  E     GG GSS +     AFKFNAQAPEF PRS T        PV+GYF
Sbjct: 5   QREEVESVTTEKKRLDGGGGSSGAQ--ATAFKFNAQAPEFVPRSHTTAPAPQVSPVSGYF 64

Query: 75  HPYFHFLGG-----------------APATSDWFFIGDQEPT------------YLIPNA 134
           +P FH+ GG                    +SDW ++G  +PT            + I N 
Sbjct: 65  YPCFHYNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHDPAAAFYISNP 124

Query: 135 TIPLP------NFSKNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPIS 194
            +  P      + SKN  SDD + KIVKQVEYQF+DMSLLANES++KHISKDP+GYVP+S
Sbjct: 125 AVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVS 184

Query: 195 VISSTKKVKSLSTNNNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVEN 254
            I+STKK+K+L++N++L+  ALR+SS+L+VS DGKKV+R   FTD+D+EEL  RTVV EN
Sbjct: 185 YIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAEN 244

Query: 255 LPDNHSHHNLEKIFSVIGSVKTIRICHPPESNPCCSKGELFISNKLHALVEYENVELAER 314
           LPD+HS+ NLEKIF V+G+VK IRICHPPESN    KG+  +SNK+HAL+EY+N  +A++
Sbjct: 245 LPDDHSYQNLEKIFGVVGNVKAIRICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADK 304

Query: 315 AAEKLNDERNWRKGLRVRLLLRRSPKSVLKTRKSEFESILDEDDSQSPISIEQESSLPNI 374
           A EKLNDERNWRKGLRVRLLLR SPKSVLK R++ F+ IL +D+  S  S E    L ++
Sbjct: 305 AVEKLNDERNWRKGLRVRLLLRCSPKSVLKNRRN-FDGILIDDELPSYESGEDSPRL-HL 364

Query: 375 AELIVDCNSEENSTASKKGWGRGRGKGRGR-----IHGHIDRSY------SLPVTAMQSS 415
            E  +D + ++N+      WG+GRGKGRGR       G   RS+      SL + ++ S 
Sbjct: 365 TESQLDNDGDDNNVGGL--WGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSH 424

[Close]

BLAST of Spg001531 vs. TAIR 10
Match: AT2G43970.1 (RNA-binding protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-55
Identity = 141/356 (39.61%), Postives = 192/356 (53.93%), Query Frame = 0


Query: 107 SKNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLST 166
           SK    +D+ QKIV QVEY FSD++L   + L + I KDP+GYVPI V++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 167 NNNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKI 226
           NN+ +   L+ S++L VS DGKKVRR  P T+   EEL SR +V ENLP++H + NL KI
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKI 304

Query: 227 FSVIGSVKTIRICH--------PPESNPCCSKGELFISNKLHALVEYENVELAERAAEKL 286
           FS +GSVK IR C         PP +           SNK+HA VEYE VELAERA  +L
Sbjct: 305 FSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERAVTEL 364

Query: 287 NDERNWRKGLRVRLLLRRSPKSVL----KTRKSEFESILDEDD-----SQSPISIEQ--- 346
           ++  NWR GL+VRL+L+   K       + RK     +  E+D      Q PI  +    
Sbjct: 365 SEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQSDDC 424

Query: 347 --ESSLPNIAELIVDCNSEENSTASKKGWGRGRGKGRGRIHGHIDRSYSLPVTAMQSSS- 406
             E       + I +    E +   +KG  RGRGKGRGR   H +++ +   +  Q+ + 
Sbjct: 425 SGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNH 484

Query: 407 ------------QVLCEASS------------KLTSKSPRMPDGTKGFTMGRGKPL 416
                       QV  + S+            K     PRMPDGT+GF+MGRGKP+
Sbjct: 485 NGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPV 540

[Close]

BLAST of Spg001531 vs. TAIR 10
Match: AT2G43970.2 (RNA-binding protein )

HSP 1 Score: 182.2 bits (461), Expect = 8.8e-46
Identity = 127/348 (36.49%), Postives = 177/348 (50.86%), Query Frame = 0


Query: 107 SKNARSDDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLST 166
           SK    +D+ QKIV QVEY FSD++L   + L + I KDP+GYVPI V++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 167 NNNLIVQALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKI 226
           NN+ +   L+ S++L VS DGKKVRR  P T+   EEL SR +V ENLP++H + NL KI
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKI 304

Query: 227 FSVIGSVKTIRICHPPESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRK 286
           FS +GSVK IR C P  +           +     L   +  EL+E          NWR 
Sbjct: 305 FSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVTELSEAG--------NWRS 364

Query: 287 GLRVRLLLRRSPKSVL----KTRKSEFESILDEDD-----SQSPISIEQ-----ESSLPN 346
           GL+VRL+L+   K       + RK     +  E+D      Q PI  +      E     
Sbjct: 365 GLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHM 424

Query: 347 IAELIVDCNSEENSTASKKGWGRGRGKGRGRIHGHIDRSYSLPVTAMQSSS--------- 406
             + I +    E +   +KG  RGRGKGRGR   H +++ +   +  Q+ +         
Sbjct: 425 QEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHH 484

Query: 407 ----QVLCEASS------------KLTSKSPRMPDGTKGFTMGRGKPL 416
               QV  + S+            K     PRMPDGT+GF+MGRGKP+
Sbjct: 485 HHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPV 524

[Close]

BLAST of Spg001531 vs. TAIR 10
Match: AT5G46250.1 (RNA-binding protein )

HSP 1 Score: 172.2 bits (435), Expect = 9.1e-43
Identity = 117/314 (37.26%), Postives = 172/314 (54.78%), Query Frame = 0


Query: 113 DDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIV 172
           D+  QKI++QVEY FSD +L  ++ L   + ++  G+VPIS I++  K+K L+ ++ LIV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 173 QALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGS 232
            AL+ SS L+VSAD KKV+R  P  +    ++   TV+VENLP++HS+ N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPEIRDPKIF--TVLVENLPEDHSNENIREIFGKAGS 220

Query: 233 VKTIRICHP--PESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRV 292
           +K++ IC P   E +    K E FI  +LHA VEYE VE AE+AA  LN+E++WR GLRV
Sbjct: 221 IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRV 280

Query: 293 RLLLRRSPKSVLKTRKSEFESILDEDDSQSPISIE---------QESSLPNIAELIVDCN 352
           +LL + + K     R+     +  E D+   +  +         +E     +       +
Sbjct: 281 KLLEQAAGK--FAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPAD 340

Query: 353 SEENSTASKKGWGRGRGKGRGRIHGHIDRSYSLPVTAMQSSSQVLCEASSKLTSKSPRMP 412
            +  +    K   +GR  G+GR   H   +     TA  SS               PRMP
Sbjct: 341 DDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMP 400

Query: 413 DGTKGFTMGRGKPL 416
           DGT+GFTMGRGK +
Sbjct: 401 DGTRGFTMGRGKAI 410

[Close]

BLAST of Spg001531 vs. TAIR 10
Match: AT5G46250.2 (RNA-binding protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-37
Identity = 87/189 (46.03%), Postives = 127/189 (67.20%), Query Frame = 0


Query: 113 DDTQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIV 172
           D+  QKI++QVEY FSD +L  ++ L   + ++  G+VPIS I++  K+K L+ ++ LIV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 173 QALRTSSRLIVSADGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGS 232
            AL+ SS L+VSAD KKV+R  P  +    ++   TV+VENLP++HS+ N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPEIRDPKIF--TVLVENLPEDHSNENIREIFGKAGS 220

Query: 233 VKTIRICHP--PESNPCCSKGELFISNKLHALVEYENVELAERAAEKLNDERNWRKGLRV 292
           +K++ IC P   E +    K E FI  +LHA VEYE VE AE+AA  LN+E++WR GLRV
Sbjct: 221 IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRV 280

Query: 293 RLLLRRSPK 300
           +LL + + K
Sbjct: 281 KLLEQAAGK 287

The following BLAST results are available for this feature:

BLAST of Spg001531 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148536.1	1.0e-213	91.75	la-related protein 6C [Momordica charantia]	[more]
XP_023007490.1	9.6e-212	90.97	la-related protein 6C [Cucurbita maxima]	[more]
XP_023533918.1	1.6e-211	90.97	la-related protein 6C [Cucurbita pepo subsp. pepo]	[more]
XP_022948148.1	3.7e-211	90.74	la-related protein 6C [Cucurbita moschata]	[more]
KAG6605122.1	4.8e-211	90.74	La-related protein 6C, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg001531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHL3	5.3e-104	50.22	La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1	[more]
O80567	1.7e-54	39.61	La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2	[more]
Q94A38	1.3e-41	37.26	La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1	[more]
Q05CL8	2.0e-18	36.42	La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2	[more]
Q4G0J3	3.4e-18	36.42	La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1	[more]

BLAST of Spg001531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5P1	5.0e-214	91.75	la-related protein 6C OS=Momordica charantia OX=3673 GN=LOC111017163 PE=4 SV=1	[more]
A0A6J1L340	4.7e-212	90.97	la-related protein 6C OS=Cucurbita maxima OX=3661 GN=LOC111499965 PE=4 SV=1	[more]
A0A6J1G8K6	1.8e-211	90.74	la-related protein 6C OS=Cucurbita moschata OX=3662 GN=LOC111451813 PE=4 SV=1	[more]
A0A6J1L529	5.5e-205	87.91	la-related protein 6C-like OS=Cucurbita maxima OX=3661 GN=LOC111499964 PE=4 SV=1	[more]
A0A6J1G8M9	9.4e-205	88.15	la-related protein 6C-like OS=Cucurbita moschata OX=3662 GN=LOC111451873 PE=4 SV...	[more]

BLAST of Spg001531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19090.1	3.8e-105	50.22	RNA-binding protein	[more]
AT2G43970.1	1.2e-55	39.61	RNA-binding protein	[more]
AT2G43970.2	8.8e-46	36.49	RNA-binding protein	[more]
AT5G46250.1	9.1e-43	37.26	RNA-binding protein	[more]
AT5G46250.2	1.5e-37	46.03	RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 122..139 score: 38.89 coord: 179..192 score: 40.91 coord: 148..163 score: 28.41 coord: 201..217 score: 24.06
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 208..291 e-value: 0.0017 score: 27.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 209..280 e-value: 4.3E-7 score: 29.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 207..297 score: 10.718352
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 113..193 e-value: 7.3E-36 score: 135.1
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 119..176 e-value: 1.2E-16 score: 60.5
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 109..200 score: 24.179741
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 111..198 e-value: 3.8E-25 score: 89.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 199..300 e-value: 2.1E-12 score: 49.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 385..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..368
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 5..417
None	No IPR available	PANTHER	PTHR22792:SF62	LA-RELATED PROTEIN 6C	coord: 5..417
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 111..196
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 193..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001531.1	Spg001531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005844	polysome
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding