Spg001480 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGGTTCTGTGAATATTGGGCCCAGACCACGAGCCGCCATGGCTGCGTGCAAGAGCTCAAGCCAATGGCGATGGCGATCGGAGGATATCCTGTGAAATGAAGAACCAGCTCGCGTAGGGCCGTTGAATCTCCACCTTCGGTTGGTCGGTTCTAATTCGTCATGTGCATAGCAGTGTTTCTATGGCAAGCTCACCCGCTGTATCCGTTCTTCCTTCTGCTCAATCGTGACGAGTATCGCAGTAGGTCCGTCCAATTTTAATGGCGTTTCCCTTCCTTTTCTATGGGGAATCAATCGATAGCTTCAGATTTCGTGAAATTGCTCTGGTTTTCTTGTTCAGGCCCACTAAGCCGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGGATTGGCCGGCGGGACGTGGCTGGCTTGCTCGAGAAATGGCAGAGTTGCATTCCTCACAAATGTCAGGGAAGTTCAGTCGCTTCCTCTGGCTAAGAGTAGAGGAGAGCTCCCCGTTGGTTTCTTGAAGGTAAGGTAAATTTGGGTTTGATTAGTTTCATAAAATTACTTAGAAAAATCATCGTAGTGTGATTCGTAATATGAGAGAGTTACAGAAACTCCAAACTGGAATTTGAATCCGTTGAAAGGTCTTTTTAACCTGTCTTGGTCGATTAAGTCTGCAAACTTTTGCGCATGAAGGTACAGCTGCACAAGCCTGCAAGCAGGACCTTGTGTGAGATTGCAAACCAATCTTGCTAATAAGAAAGGAACTGCTAGTTTTGTTATATTGCGCTGCATACTAGTGAATAAAGAAAGCTGATTGAATTTCCTAATAATGGATGAAGATTAAAGATAGAACATGCTAGTTTTGTTTGTGCTAGTGAATAGGAAAAGTGAAAAGGAACAGCTGATTGAAATTACTAATAGTGGGTAGAGATTGAAGATAGAACATGCTAGTTTTGATTGTGCTCCCTACTAGTGGAGGAAACGTGAATAGAAAAAGTAAAAAGGAAAAGCTGATTGAATAACTAATGATGAAACTAGTTTTGCTTGTGCTATGTACCAGTGAATAGAAAAGCGATTGAAATTACTAATGGTGGATGTGGATGAAGATTGAAGATAGAATATGTTAGTTTTCTTTGTTCTGTGTACTAGTGAATAGGAAAAACTAATGATGGATGAAGATTGAAGATAGAACATGCTAGTTTTGAGTGTGCTCTCTACTAGTGAAGAGGAAAAGCTGATTGAAATAACTAGTGATGAAAGCTTGTGCTATGTAGCATTGAATAGGAAAAGCTGATTGAAATTACTAATGGTGGATGTGGATGAAGATTGAAGATAGAACATGTTAGTTTTTCTTTGCCCTGTGTACCAGGGAATAGGAAAAGTTAATGATGGATAAAGATTGAAGATAGAACGTGTTTGGTACTTTGCTCTTGTCTCTCTTATCAGAGAATGCAAATAATTGTCATTCTTATTAGGAAAAAGGACATACAACGGACATAGTTACACATACTTTGAGAAGTGGATATACGTAAAAACAACATCATCTTCAAGAAATATCAAGATAGTTGAAGAGATCTCTGACATTCAAGTCGTCTCAGATATCCTTTTCTTGAACTTGGAATGGTCGAGAAAGATGAACCTGCACTGCATTTTGTAACCTTCAATCCAAACCAAAATCTCCAAAACTAGAAATGGAATTCTAGTAACTTAAACAACTCAGTTAAGAACTCTGTGAGATGATGATCACATAAAAGTAAGAGGGATTGAAGAAGACACCAAAATGACTTCAGGCACCACTCTTCATGATAAACATCTTCATGAAGGGTTTATAAAAACATCCATAAATAAGAGATCCCTTGACATGGATTCATCCTCTTTTTAGCATTAGCAAGGAAAATCCGGCCTGCAGATTTTCCTGAACTCTTCCACGTTACAAACAGTAAGATTTGCCAATGCCACCACAGTTTTCAGTGAAATGCAAACAGAAAGTTAACGTTGATATTGCTAACAAGAAAGAATTCCTGGCGTTTGGAGTCGTAGAATGACAATTGTCCAATATTTTTGTTTTACAGAGCGAGAAGACTCCCCTCGACTTCGCCAAAGAAGTTGCAAAGGAAGCACACCAGTACAACGGTTTCAACTTGATAATCGCTGACATTTCCTCCAAAACCATGTTCTATATCACCAACAGACCAATAAACAACAGCGACAGCCTTGTCACTGAGGTTTCCCCCGGCATCCATGTCCTCACAAATGCACAACTCGACTCTCCATGGCCCAAGGTAAGAAAGAAGCATCTCAATTCCCTTCGTTAAAGTTCTTATAGTTTTTTCGAGTCTTGGATTTAGTAGTGCTTCAACATAGAAGATCTCAATTTCTTTGGCAGTGATTTTGCCTTGTTTCTATATCCAAGTTCAAACTGTAAAGAAAGTGTCAAGAATATAAATAGATGATCAACCAAAGCTTGGGTTTCGTAGCTTCAATTTGGAAGCTCATTAAAAAAATTTGCCTGATTGTTTAGGCACAAAGACTGGACCAAAGTTTCAGAGAGATTGTGAACAAAAATAGCGACAGGGAACTTCCAGTAAAAGCGATGGTTGAAAAGCTAATGACCAACACAGTTAAAGACGACGAGAGCTTGCTACCCGGTATCTATTCTCCTCGAAGGGAATATCCATTTAGTTCCATATTTGTTGATACAGACACAGAACTGGTAAAAAGGATTTAAGTCATTTTGTTAGCTTTTCTGAGATATCCATGGAGAAACTGAAATGGGTTTGCTCCATTTTTGCATAGGGACGCTATGGAACTGGAAGCATATCTGCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCATTTGGAGAATGATGCATGGATTGACAACAGTTTTACTTTCCAGATTAAGAACTTCTAAATCCTAACAGACTTGAAAAGATGTACTTTTTTTTTTTAAACTTGAAAAAGATGTATTATAGTTAGGAAGTTATTGTTTGTTATTAAAAGTTTATTCCTTCCTAACTAATTACTTGCATTGCTGGCTATTTATAAAGCCTTGCTCATATCAGGCTGTTCTATTTACTCTCTGAAGAAGTCTAATATGGTATTAGAGCCATAATCTGACGTAGCCGTTAAATGGGTGCCGAACAAAGAGGTTGTGAGCCTTGAAGTCTAATAAATCCTTACCAAGGTGAGTTCAGTTCTATAATCTAAGCTTCTATTTTGTTTGAATAAAGAATCGAAAAGCAGAAGGAAGGTTAAAGAATAAAGATTTAAATTTTGAATTCACCAAATGCCCCAAGTTAATTTCATTTTTCTTCCATTAGAAGAAACCTCCAGCAGATTCCTTAAATTTAAAAAAGAAAAAAAAAAAGGAAATAAGAAGAAATAAGGTAAAATTGAAACTTTTCTTGCGTTGATTTCAATTTTGTTCCTAATTAAGTAATTTTGTCCCTAGAGAAATAATGTTCTAAAAAGGAAAAGGAAAATTTCTGAATGAAGATTTTCTTTAAGTACAAGGTAAAACTGAAATCTAAACGCTATTAATACTCAAAATCCATAATTTTGAGCCTATCATTTGATTAAATCTCTCCAAACTTCTCTTAATTCATCAATCCAATAAAGTTTTTTTTTTTTTAAACATGAATTATCAGTAAATTAAAACTTATAAAACTAAATTGAAATTAAGCACAATTACAAGGACTAAAATGATAATTTAGATTTTGTTTTAAAAAGGCATATAGAGTACAAGCTGAGTTTATTCTATCTATAGTCTCACAAGAGCTTACATCACCTTTACATCAGCTAAAACGACGACGTTTTAGAAAACTGGTTTCGACTTTCAACCTGCGCAAGTTTCACACCGGCAACTCTCGCCGCACCTGCAGTTGTCCTTGCCGACTCCGGCCACCGCACTGGGACACGTGCAGGGGTTGCACCCACAGTGGTCCCCGCACGGGCACCGCCGGTGCTCCACCTCCCCTCCCGCCGTCGCCGTCGCCGTCGCGCACCTGCAAGCCCTGCCGCCGGGACAGGGAACGGCGCAACCACAGCTCTGGTTGCAAGCTCTGACTCCGCCGCCTGGTTCTGCCATTATTTCCTCTTCCTTCACTTGTTCGCCGATGACATTCGCTTCCCTTCGTTCCGATTACCATCGATCCGTTTATATATCTTTGAAACTTTCCCGCTTCTGTTGTGCTTCTGGTTTACACGTGCCTATGCACGTGGCTAGCTCCCACGCCATGGCTGTATTAAGTGAAGAATTTCCTCCATCTGTCGGTTTGGTTTTGTGATGTTC ATGTGCATAGCAGTGTTTCTATGGCAAGCTCACCCGCTGTATCCGTTCTTCCTTCTGCTCAATCGTGACGAGTATCGCAGTAGGCCCACTAAGCCGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGGATTGGCCGGCGGGACGTGGCTGGCTTGCTCGAGAAATGGCAGAGTTGCATTCCTCACAAATGTCAGGGAAGTTCAGTCGCTTCCTCTGGCTAAGAGTAGAGGAGAGCTCCCCGTTGGTTTCTTGAAGGTAAGGTACAGCTGCACAAGCCTGCAAGCAGGACCTTGTGTGAGATTGCAAACCAATCTTGCTAATAAGAAAGGAACTGCTAGTTTTGTTATATTGCGCTGCATACTAAGCGAGAAGACTCCCCTCGACTTCGCCAAAGAAGTTGCAAAGGAAGCACACCAGTACAACGGTTTCAACTTGATAATCGCTGACATTTCCTCCAAAACCATGTTCTATATCACCAACAGACCAATAAACAACAGCGACAGCCTTGTCACTGAGGTTTCCCCCGGCATCCATGTCCTCACAAATGCACAACTCGACTCTCCATGGCCCAAGGCACAAAGACTGGACCAAAGTTTCAGAGAGATTGTGAACAAAAATAGCGACAGGGAACTTCCAGTAAAAGCGATGGTTGAAAAGCTAATGACCAACACAGTTAAAGACGACGAGAGCTTGCTACCCGGTATCTATTCTCCTCGAAGGGAATATCCATTTAGTTCCATATTTGTTGATACAGACACAGAACTGGGACGCTATGGAACTGGAAGCATATCTGCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCATTTGGAGAATGATGCATGGATTGACAACAGTTTTACTTTCCAGATTAAGAACTTCTAA ATGTGCATAGCAGTGTTTCTATGGCAAGCTCACCCGCTGTATCCGTTCTTCCTTCTGCTCAATCGTGACGAGTATCGCAGTAGGCCCACTAAGCCGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGGATTGGCCGGCGGGACGTGGCTGGCTTGCTCGAGAAATGGCAGAGTTGCATTCCTCACAAATGTCAGGGAAGTTCAGTCGCTTCCTCTGGCTAAGAGTAGAGGAGAGCTCCCCGTTGGTTTCTTGAAGGTAAGGTACAGCTGCACAAGCCTGCAAGCAGGACCTTGTGTGAGATTGCAAACCAATCTTGCTAATAAGAAAGGAACTGCTAGTTTTGTTATATTGCGCTGCATACTAAGCGAGAAGACTCCCCTCGACTTCGCCAAAGAAGTTGCAAAGGAAGCACACCAGTACAACGGTTTCAACTTGATAATCGCTGACATTTCCTCCAAAACCATGTTCTATATCACCAACAGACCAATAAACAACAGCGACAGCCTTGTCACTGAGGTTTCCCCCGGCATCCATGTCCTCACAAATGCACAACTCGACTCTCCATGGCCCAAGGCACAAAGACTGGACCAAAGTTTCAGAGAGATTGTGAACAAAAATAGCGACAGGGAACTTCCAGTAAAAGCGATGGTTGAAAAGCTAATGACCAACACAGTTAAAGACGACGAGAGCTTGCTACCCGGTATCTATTCTCCTCGAAGGGAATATCCATTTAGTTCCATATTTGTTGATACAGACACAGAACTGGGACGCTATGGAACTGGAAGCATATCTGCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCATTTGGAGAATGATGCATGGATTGACAACAGTTTTACTTTCCAGATTAAGAACTTCTAA MCIAVFLWQAHPLYPFFLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNGRVAFLTNVREVQSLPLAKSRGELPVGFLKVRYSCTSLQAGPCVRLQTNLANKKGTASFVILRCILSEKTPLDFAKEVAKEAHQYNGFNLIIADISSKTMFYITNRPINNSDSLVTEVSPGIHVLTNAQLDSPWPKAQRLDQSFREIVNKNSDRELPVKAMVEKLMTNTVKDDESLLPGIYSPRREYPFSSIFVDTDTELGRYGTGSISALSVKNSGEASFFERHLENDAWIDNSFTFQIKNF Homology
BLAST of Spg001480 vs. NCBI nr
Match: KAG6604975.1 (Transport and Golgi organization protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 479.6 bits (1233), Expect = 2.0e-131 Identity = 240/302 (79.47%), Postives = 248/302 (82.12%), Query Frame = 0
BLAST of Spg001480 vs. NCBI nr
Match: XP_022971076.1 (transport and Golgi organization protein 2 homolog [Cucurbita maxima] >XP_022971077.1 transport and Golgi organization protein 2 homolog [Cucurbita maxima]) HSP 1 Score: 477.6 bits (1228), Expect = 7.8e-131 Identity = 239/302 (79.14%), Postives = 248/302 (82.12%), Query Frame = 0
BLAST of Spg001480 vs. NCBI nr
Match: XP_022947387.1 (transport and Golgi organization protein 2 homolog [Cucurbita moschata] >XP_022947388.1 transport and Golgi organization protein 2 homolog [Cucurbita moschata]) HSP 1 Score: 475.7 bits (1223), Expect = 2.9e-130 Identity = 238/302 (78.81%), Postives = 246/302 (81.46%), Query Frame = 0
BLAST of Spg001480 vs. NCBI nr
Match: XP_022140668.1 (transport and Golgi organization 2 homolog [Momordica charantia]) HSP 1 Score: 471.5 bits (1212), Expect = 5.6e-129 Identity = 233/301 (77.41%), Postives = 251/301 (83.39%), Query Frame = 0
BLAST of Spg001480 vs. NCBI nr
Match: XP_023532494.1 (transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo] >XP_023532495.1 transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo] >XP_023532496.1 transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 470.7 bits (1210), Expect = 9.5e-129 Identity = 235/301 (78.07%), Postives = 245/301 (81.40%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy Swiss-Prot
Match: Q29RZ5 (Transport and Golgi organization protein 2 homolog OS=Bos taurus OX=9913 GN=TANGO2 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 6.0e-25 Identity = 96/319 (30.09%), Postives = 143/319 (44.83%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy Swiss-Prot
Match: P54797 (Transport and Golgi organization 2 homolog OS=Mus musculus OX=10090 GN=Tango2 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 7.8e-25 Identity = 94/319 (29.47%), Postives = 147/319 (46.08%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy Swiss-Prot
Match: Q6ICL3 (Transport and Golgi organization protein 2 homolog OS=Homo sapiens OX=9606 GN=TANGO2 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.3e-23 Identity = 95/319 (29.78%), Postives = 143/319 (44.83%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy TrEMBL
Match: A0A6J1I2B1 (transport and Golgi organization protein 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111469854 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 3.8e-131 Identity = 239/302 (79.14%), Postives = 248/302 (82.12%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy TrEMBL
Match: A0A6J1G6B2 (transport and Golgi organization protein 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451268 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 1.4e-130 Identity = 238/302 (78.81%), Postives = 246/302 (81.46%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy TrEMBL
Match: A0A6J1CII2 (transport and Golgi organization 2 homolog OS=Momordica charantia OX=3673 GN=LOC111011269 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.7e-129 Identity = 233/301 (77.41%), Postives = 251/301 (83.39%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy TrEMBL
Match: A0A2N9FED1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13380 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 2.5e-98 Identity = 188/300 (62.67%), Postives = 215/300 (71.67%), Query Frame = 0
BLAST of Spg001480 vs. ExPASy TrEMBL
Match: A0A6A1UGL1 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G025184 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 5.1e-96 Identity = 178/302 (58.94%), Postives = 216/302 (71.52%), Query Frame = 0
BLAST of Spg001480 vs. TAIR 10
Match: AT4G38260.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 305.4 bits (781), Expect = 4.9e-83 Identity = 157/306 (51.31%), Postives = 199/306 (65.03%), Query Frame = 0
BLAST of Spg001480 vs. TAIR 10
Match: AT1G20730.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 105.1 bits (261), Expect = 9.7e-23 Identity = 92/290 (31.72%), Postives = 137/290 (47.24%), Query Frame = 0
BLAST of Spg001480 vs. TAIR 10
Match: AT1G20740.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 98.6 bits (244), Expect = 9.1e-21 Identity = 91/281 (32.38%), Postives = 129/281 (45.91%), Query Frame = 0
BLAST of Spg001480 vs. TAIR 10
Match: AT1G20680.2 (Protein of unknown function (DUF833) ) HSP 1 Score: 96.3 bits (238), Expect = 4.5e-20 Identity = 83/308 (26.95%), Postives = 135/308 (43.83%), Query Frame = 0
BLAST of Spg001480 vs. TAIR 10
Match: AT1G20680.1 (Protein of unknown function (DUF833) ) HSP 1 Score: 79.7 bits (195), Expect = 4.4e-15 Identity = 79/299 (26.42%), Postives = 131/299 (43.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|