Spg001466 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001466
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor MYB59-like
Location	scaffold8: 44668268 .. 44669256 (+)
RNA-Seq Expression	Spg001466
Synteny	Spg001466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAGGACATCCAACTGATTTGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGTTGCTAGGTAGGCTAAACTGAAGATTTGATGCTTTTGTGAAAGGCTCTCTTTTAACCCCCATTTGGGATTTGGGATTTGGATTTGGATTTGTCTTGTAGGACTGAACAGAACAGGCAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCTGGTCTCAAGAGAGGCAAGATGACTGCTCAAGAAGAACGACTCGTGCTTGAACTTCACGCCAAGTGGGGAAACAGGTCTCTAAAACTCCATAGATTTTCATTCCCCTTCTTTGTTCTTTCTCAACCATCACCTCTAACACTTTCTAACTTCTCTTCATCTCAGATGGTCCAAAATTGCTCGCAAATTACCAGGCCGCACAGATAACGAAATCAAGAACTACTGGAGAACCCACATGAGGAAGAAGGCACAGGAGAAAAAAAGGGCTTTGTCTTCGTCTTCCTCCTCATCATCTTCTTCCTCTTCATCCAACATTCCAGCAGCAGAATTTCCTGCAGATACTGGACCAGTGAAGTTCTTTGACTCAGGGGGGTCTAAAATCTCAGCTTCATCATCAACAAAGAAGAAGATGGAGCAGAATCAAGAATTGGGTGATCCAAACGGATACTCCATGGATGATATATGGAAAGATATTGATCTGTCTGATCATGAGAGCTTGATCATAAATCAAGATGTGTACAGTGAAGAAGACTGCAACTTTTCTTGCCCTGCTCTGAATACTCCTCCTTCATGGGACTATTACTGTGGGGATTCTCTGTGGAAGATCGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGCTATGATCATAACGGGAGGCCACGTCTTGCTCAAGCTAATCAGAATTTTTTCTATTGA

mRNA sequence

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAGGACATCCAACTGATTTGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGGGGGTCTAAAATCTCAGCTTCATCATCAACAAAGAAGAAGATGGAGCAGAATCAAGAATTGGGTGATCCAAACGGATACTCCATGGATGATATATGGAAAGATATTGATCTGTCTGATCATGAGAGCTTGATCATAAATCAAGATGTGTACAGTGAAGAAGACTGCAACTTTTCTTGCCCTGCTCTGAATACTCCTCCTTCATGGGACTATTACTGTGGGGATTCTCTGTGGAAGATCGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGCTATGATCATAACGGGAGGCCACGTCTTGCTCAAGCTAATCAGAATTTTTTCTATTGA

Coding sequence (CDS)

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAGGACATCCAACTGATTTGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGGGGGTCTAAAATCTCAGCTTCATCATCAACAAAGAAGAAGATGGAGCAGAATCAAGAATTGGGTGATCCAAACGGATACTCCATGGATGATATATGGAAAGATATTGATCTGTCTGATCATGAGAGCTTGATCATAAATCAAGATGTGTACAGTGAAGAAGACTGCAACTTTTCTTGCCCTGCTCTGAATACTCCTCCTTCATGGGACTATTACTGTGGGGATTCTCTGTGGAAGATCGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGCTATGATCATAACGGGAGGCCACGTCTTGCTCAAGCTAATCAGAATTTTTTCTATTGA

Protein sequence

MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRGSKISASSSTKKKMEQNQELGDPNGYSMDDIWKDIDLSDHESLIINQDVYSEEDCNFSCPALNTPPSWDYYCGDSLWKIEEEESKLIFSGYDHNGRPRLAQANQNFFY

Homology

[Close]

BLAST of Spg001466 vs. NCBI nr
Match: KAG7010573.1 (Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 3.1e-67
Identity = 138/193 (71.50%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDR------------- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLK    R             
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKAQEKRRALSSSSSSSSSY 60

Query: 61  ----------------------GSKISA-SSSTKKKMEQNQELGDPNGYSMDDIWKDIDL 120
                                 GS+ISA SSSTKKKM +NQELGDPNG+SMDDIWKDIDL
Sbjct: 61  SSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMDDIWKDIDL 120

Query: 121 SDHESLIINQDVYSEEDC-NFSCPALNTPPSWDYYCGDSLWKI-EEEESKLIFSGYDHNG 156
           SDHESL +NQDVYSEEDC NFSCPAL +P  WDYYCGDSLW++ EEEESKLIFSGYDHNG
Sbjct: 121 SDHESLTMNQDVYSEEDCNNFSCPALTSPTPWDYYCGDSLWRMEEEEESKLIFSGYDHNG 180

[Close]

BLAST of Spg001466 vs. NCBI nr
Match: XP_022148320.1 (transcription factor MYB59 isoform X1 [Momordica charantia])

HSP 1 Score: 244.6 bits (623), Expect = 5.7e-61
Identity = 135/264 (51.14%), Postives = 146/264 (55.30%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL------------------- 60
           MVEGQEIRKGPWTEQEDIQLIC+VGLFGDRRWD IAKVSGL                   
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICYVGLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  -------------------------KVA-------------------------------- 120
                                    K+A                                
Sbjct: 61  KRGKMSSQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSA 120

Query: 121 ---------------------------------GDRGSKISASSSTKKKMEQNQELGDPN 156
                                            G  GS+++A S+TKKKME+NQE GDPN
Sbjct: 121 SLSSSSSSSSSSSNNSAVEFPADTGPVKFFDSGGSEGSEVTALSTTKKKMEENQEQGDPN 180

[Close]

BLAST of Spg001466 vs. NCBI nr
Match: XP_023511995.1 (myb-related protein MYBAS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 9.1e-59
Identity = 137/261 (52.49%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG--------------- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL   G               
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ----------------------------DRGSKISA-SSSTKKKMEQNQELGDPNGYSMD 156
                                         GS+ISA SSSTKKKM +NQELGDPNG+SMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Spg001466 vs. NCBI nr
Match: XP_022943941.1 (transcription factor MYB59-like [Cucurbita moschata])

HSP 1 Score: 237.3 bits (604), Expect = 9.1e-59
Identity = 137/261 (52.49%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG--------------- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL   G               
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ----------------------------DRGSKISA-SSSTKKKMEQNQELGDPNGYSMD 156
                                         GS+ISA SSSTKKKM +NQELGDPNG+SMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Spg001466 vs. NCBI nr
Match: XP_022986918.1 (transcription factor MYB59-like [Cucurbita maxima])

HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57
Identity = 135/261 (51.72%), Postives = 143/261 (54.79%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG--------------- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL   G               
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ----------------------------DRGSKISASS-STKKKMEQNQELGDPNGYSMD 156
                                         GS+ISASS STKKKM +NQELGDPNG+SMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSPSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Spg001466 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 64/213 (30.05%), Postives = 90/213 (42.25%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVA-------------------- 64
           +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSGL                       
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 65  ----------------GDRGSKISAS--------------SSTKKKMEQ----------- 124
                           G+R SKI+                +  +KK ++           
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSS 125

Query: 125 ------------NQELGDPNG----------YSMDDIWKDIDLSDHESL-IINQDVYSEE 134
                       +Q+ G  NG          YSMDDIW++ID S    +  +  + YSE+
Sbjct: 126 SNCCSSSMTTTTSQDTGGSNGKMNQECEDGYYSMDDIWREIDQSGANVIKPVKDNYYSEQ 185

[Close]

BLAST of Spg001466 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 66/231 (28.57%), Postives = 91/231 (39.39%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL----------------------- 64
           +E+RKGPWTEQED+QL+C V LFGDRRWDF+AKVSGL                       
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 65  --------------------------------------------KVAGDRGSKISASSST 124
                                                       K A +R   +S SSS+
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGDMSPSSSS 125

Query: 125 KKKMEQ----------NQELGD------------------PNGYSMDDIWKDIDLSDHES 139
              + Q          + + GD                   +GY+MD IWK+I+     S
Sbjct: 126 SSLVYQSCLLDTVPIISMDGGDIHDDRSCMARVLKSTQSVMDGYTMDQIWKEIEAPGAPS 185

[Close]

BLAST of Spg001466 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.8e-13
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 5  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG 46
          +EIRKGPWTEQED+QL+C V LFG+RRWDFIAKVSGL   G
Sbjct: 6  EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTG 46

[Close]

BLAST of Spg001466 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 69/237 (29.11%), Postives = 90/237 (37.97%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVA---------------- 60
           M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSGL                   
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  --------------------GDRGSKI--------------------------------- 120
                               G+R SKI                                 
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 -------SASSST----------------------------KKKMEQNQELGDPNGYSMD 134
                  S+SS T                            +   E NQE  D   YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDV--YSLD 180

[Close]

BLAST of Spg001466 vs. ExPASy Swiss-Prot
Match: Q9SCP1 (Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.2e-06
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 5  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG 46
          + +R+GPW E+ED +L+  + L G+RRWD +A VSGLK +G
Sbjct: 7  ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSG 47

[Close]

BLAST of Spg001466 vs. ExPASy TrEMBL
Match: A0A6J1D2K9 (transcription factor MYB59 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017001 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61
Identity = 135/264 (51.14%), Postives = 146/264 (55.30%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL------------------- 60
           MVEGQEIRKGPWTEQEDIQLIC+VGLFGDRRWD IAKVSGL                   
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICYVGLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  -------------------------KVA-------------------------------- 120
                                    K+A                                
Sbjct: 61  KRGKMSSQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSA 120

Query: 121 ---------------------------------GDRGSKISASSSTKKKMEQNQELGDPN 156
                                            G  GS+++A S+TKKKME+NQE GDPN
Sbjct: 121 SLSSSSSSSSSSSNNSAVEFPADTGPVKFFDSGGSEGSEVTALSTTKKKMEENQEQGDPN 180

[Close]

BLAST of Spg001466 vs. ExPASy TrEMBL
Match: A0A6J1FT29 (transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111448512 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.4e-59
Identity = 137/261 (52.49%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG--------------- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL   G               
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ----------------------------DRGSKISA-SSSTKKKMEQNQELGDPNGYSMD 156
                                         GS+ISA SSSTKKKM +NQELGDPNG+SMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSSSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Spg001466 vs. ExPASy TrEMBL
Match: A0A6J1JHY1 (transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111484512 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.3e-58
Identity = 135/261 (51.72%), Postives = 143/261 (54.79%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG--------------- 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL   G               
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 71

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 72  KRGKMTAQEERLVLELHNKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSS 131

Query: 121 ----------------------------DRGSKISASS-STKKKMEQNQELGDPNGYSMD 156
                                         GS+ISASS STKKKM +NQELGDPNG+SMD
Sbjct: 132 SSSSSSSYSSNNPAVEFPADTGPVKFFDSGGSEISASSPSTKKKMVENQELGDPNGFSMD 191

[Close]

BLAST of Spg001466 vs. ExPASy TrEMBL
Match: A0A6J1G7M1 (transcription factor MYB59-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451610 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.6e-53
Identity = 129/253 (50.99%), Postives = 136/253 (53.75%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG--------------- 60
           M EGQ IRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL   G               
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 ---------------------DRGSKISASSSTKKKMEQNQELGDPNGYSMDDIWKDIDL 156
                                  GS+ISASSSTKKK E+NQ +GDPNGYSMDDIWKDID+
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDM 180

[Close]

BLAST of Spg001466 vs. ExPASy TrEMBL
Match: A0A6J1L3T5 (transcription factor MYB59-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499641 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.2e-52
Identity = 128/253 (50.59%), Postives = 135/253 (53.36%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG--------------- 60
           M EGQ IRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGL   G               
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 ---------------------DRGSKISASSSTKKKMEQNQELGDPNGYSMDDIWKDIDL 156
                                  GS+ISASSSTKKK E+NQ +GDPNGYSMDDIWKDID+
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDM 180

[Close]

BLAST of Spg001466 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 81.3 bits (199), Expect = 7.7e-16
Identity = 64/213 (30.05%), Postives = 90/213 (42.25%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVA-------------------- 64
           +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSGL                       
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 65  ----------------GDRGSKISAS--------------SSTKKKMEQ----------- 124
                           G+R SKI+                +  +KK ++           
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSS 125

Query: 125 ------------NQELGDPNG----------YSMDDIWKDIDLSDHESL-IINQDVYSEE 134
                       +Q+ G  NG          YSMDDIW++ID S    +  +  + YSE+
Sbjct: 126 SNCCSSSMTTTTSQDTGGSNGKMNQECEDGYYSMDDIWREIDQSGANVIKPVKDNYYSEQ 185

[Close]

BLAST of Spg001466 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13
Identity = 69/237 (29.11%), Postives = 90/237 (37.97%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVA---------------- 60
           M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSGL                   
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  --------------------GDRGSKI--------------------------------- 120
                               G+R SKI                                 
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 -------SASSST----------------------------KKKMEQNQELGDPNGYSMD 134
                  S+SS T                            +   E NQE  D   YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDV--YSLD 180

[Close]

BLAST of Spg001466 vs. TAIR 10
Match: AT2G47190.1 (myb domain protein 2 )

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 3  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG 46
          E  ++RKGPWTE+ED  L+ FV + GD RW+ IA+ SGLK  G
Sbjct: 16 EDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTG 58

[Close]

BLAST of Spg001466 vs. TAIR 10
Match: AT3G53200.1 (myb domain protein 27 )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 5  QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG 46
          + +R+GPW E+ED +L+  + L G+RRWD +A VSGLK +G
Sbjct: 7  ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSG 47

[Close]

BLAST of Spg001466 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 3  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAG 46
          EG E RKGPWT +ED  L  ++   G+ RW+ +AK SGLK AG
Sbjct: 14 EGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAG 56

The following BLAST results are available for this feature:

BLAST of Spg001466 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010573.1	3.1e-67	71.50	Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022148320.1	5.7e-61	51.14	transcription factor MYB59 isoform X1 [Momordica charantia]	[more]
XP_023511995.1	9.1e-59	52.49	myb-related protein MYBAS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943941.1	9.1e-59	52.49	transcription factor MYB59-like [Cucurbita moschata]	[more]
XP_022986918.1	1.7e-57	51.72	transcription factor MYB59-like [Cucurbita maxima]	[more]

BLAST of Spg001466 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4JL84	1.1e-14	30.05	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q53NK6	1.1e-14	28.57	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE...	[more]
Q4JL76	7.8e-13	78.05	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q9LX82	1.1e-11	29.11	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q9SCP1	3.2e-06	51.22	Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1	[more]

BLAST of Spg001466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2K9	2.7e-61	51.14	transcription factor MYB59 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1FT29	4.4e-59	52.49	transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111448512 PE...	[more]
A0A6J1JHY1	8.3e-58	51.72	transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111484512 PE=4...	[more]
A0A6J1G7M1	3.6e-53	50.99	transcription factor MYB59-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L3T5	5.2e-52	50.59	transcription factor MYB59-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Spg001466 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59780.3	7.7e-16	30.05	myb domain protein 59	[more]
AT3G46130.1	8.0e-13	29.11	myb domain protein 48	[more]
AT2G47190.1	9.2e-09	55.81	myb domain protein 2	[more]
AT3G53200.1	2.3e-07	51.22	myb domain protein 27	[more]
AT1G25340.1	1.1e-06	53.49	myb domain protein 116	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 3..64 e-value: 1.9E-6 score: 29.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..72
None	No IPR available	PANTHER	PTHR45675:SF7	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 55..134 coord: 5..45
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 9..39 e-value: 1.6E-6 score: 28.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 4..40 score: 12.096313
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 55..134 coord: 5..45
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..37 score: 6.632088
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..42 e-value: 3.49767E-6 score: 39.8662
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 5..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001466.1	Spg001466.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding