Spg001296 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001296
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	glutamic acid-rich protein-like
Location	scaffold8: 44889490 .. 44890290 (-)
RNA-Seq Expression	Spg001296
Synteny	Spg001296

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACCGTCACCGGAAGTGTCGTTTCTTCGAAGCCAATCTCTCTCTCCAAAGCGGCTTCCACCCTCTCCTCCTTCCTCTCCGCCGATAATGGCGCTTCGCAAGCGCTCTGTGCCTACCTGCGACGCGCCTCCGCCTCCTTCAACGAGTTAAAGCAGCTTCACAAGGACCTCAAGTCTTCGCGGTCCGACCGAAAGCACCGGCTTCGAAGATCGGAGGTTTCAAACGATTTAGAGGTTGCCGTAGACAATCCATATGGGACCGAATTAAAGACTGAAACTGAAGATAAACCTAGCGGAAGAGTTGAGATCGATGTGGAATCGAGCGATAGAGATAAAGGCGTTGTAGCAGTCGAGAAAAAGAGAAAAAAGCACAAGAAGAGTGAGGATGGACTTGGTAAATCGCGAATTAGTGATAATAATGGCGAGATTGAAGCTACTGAGGATCTCGTTGAGAACAATGTAGCAAGGGGAAAAGATAGAAAGAAGCATGAGGACAAGAAGAGTTTGGGTGATGTGAAGGAAGAAAAGAGCACAAATAAGGACGATGATGATGAAAATAATCTTGTGGAGATGTCGACTAAGAAGAAGAAGAAGAAGAAGAAGAGGGAAGAAGACGTTGACGATCTTCAAAATAACAGTGGAGGAGCTATAGAGAAAGAAGAAATGCCAGTTTCGGATAGCAAAGAATTGAAAAGGAAAGAGAGGAAAAAGAGGAAGAATCAAGACTTACAAGAAGAAGGGGGTGATGATGGTTCAGAGGAGCAGCAGAGTACGAAGAGAAGGAAAGGAAATTTATGA

mRNA sequence

ATGAAGACCGTCACCGGAAGTGTCGTTTCTTCGAAGCCAATCTCTCTCTCCAAAGCGGCTTCCACCCTCTCCTCCTTCCTCTCCGCCGATAATGGCGCTTCGCAAGCGCTCTGTGCCTACCTGCGACGCGCCTCCGCCTCCTTCAACGAGTTAAAGCAGCTTCACAAGGACCTCAAGTCTTCGCGGTCCGACCGAAAGCACCGGCTTCGAAGATCGGAGGTTTCAAACGATTTAGAGGTTGCCGTAGACAATCCATATGGGACCGAATTAAAGACTGAAACTGAAGATAAACCTAGCGGAAGAGTTGAGATCGATGTGGAATCGAGCGATAGAGATAAAGGCGTTGTAGCAGTCGAGAAAAAGAGAAAAAAGCACAAGAAGAGTGAGGATGGACTTGGTAAATCGCGAATTAGTGATAATAATGGCGAGATTGAAGCTACTGAGGATCTCGTTGAGAACAATGTAGCAAGGGGAAAAGATAGAAAGAAGCATGAGGACAAGAAGAGTTTGGGTGATGTGAAGGAAGAAAAGAGCACAAATAAGGACGATGATGATGAAAATAATCTTGTGGAGATGTCGACTAAGAAGAAGAAGAAGAAGAAGAAGAGGGAAGAAGACGTTGACGATCTTCAAAATAACAGTGGAGGAGCTATAGAGAAAGAAGAAATGCCAGTTTCGGATAGCAAAGAATTGAAAAGGAAAGAGAGGAAAAAGAGGAAGAATCAAGACTTACAAGAAGAAGGGGGTGATGATGGTTCAGAGGAGCAGCAGAGTACGAAGAGAAGGAAAGGAAATTTATGA

Coding sequence (CDS)

ATGAAGACCGTCACCGGAAGTGTCGTTTCTTCGAAGCCAATCTCTCTCTCCAAAGCGGCTTCCACCCTCTCCTCCTTCCTCTCCGCCGATAATGGCGCTTCGCAAGCGCTCTGTGCCTACCTGCGACGCGCCTCCGCCTCCTTCAACGAGTTAAAGCAGCTTCACAAGGACCTCAAGTCTTCGCGGTCCGACCGAAAGCACCGGCTTCGAAGATCGGAGGTTTCAAACGATTTAGAGGTTGCCGTAGACAATCCATATGGGACCGAATTAAAGACTGAAACTGAAGATAAACCTAGCGGAAGAGTTGAGATCGATGTGGAATCGAGCGATAGAGATAAAGGCGTTGTAGCAGTCGAGAAAAAGAGAAAAAAGCACAAGAAGAGTGAGGATGGACTTGGTAAATCGCGAATTAGTGATAATAATGGCGAGATTGAAGCTACTGAGGATCTCGTTGAGAACAATGTAGCAAGGGGAAAAGATAGAAAGAAGCATGAGGACAAGAAGAGTTTGGGTGATGTGAAGGAAGAAAAGAGCACAAATAAGGACGATGATGATGAAAATAATCTTGTGGAGATGTCGACTAAGAAGAAGAAGAAGAAGAAGAAGAGGGAAGAAGACGTTGACGATCTTCAAAATAACAGTGGAGGAGCTATAGAGAAAGAAGAAATGCCAGTTTCGGATAGCAAAGAATTGAAAAGGAAAGAGAGGAAAAAGAGGAAGAATCAAGACTTACAAGAAGAAGGGGGTGATGATGGTTCAGAGGAGCAGCAGAGTACGAAGAGAAGGAAAGGAAATTTATGA

Protein sequence

MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKSSRSDRKHRLRRSEVSNDLEVAVDNPYGTELKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRKKHKKSEDGLGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKKSLGDVKEEKSTNKDDDDENNLVEMSTKKKKKKKKREEDVDDLQNNSGGAIEKEEMPVSDSKELKRKERKKRKNQDLQEEGGDDGSEEQQSTKRRKGNL

Homology

[Close]

BLAST of Spg001296 vs. NCBI nr
Match: XP_038902882.1 (probable xyloglucan galactosyltransferase GT11 [Benincasa hispida])

HSP 1 Score: 302.8 bits (774), Expect = 3.0e-78
Identity = 210/359 (58.50%), Postives = 235/359 (65.46%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKTVTGSVVSSKPIS+SKAASTLSSFLS DNGASQALCAYLRRASASFNELKQLHK+LKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSVDNGASQALCAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPY---------------------------------- 120
           SRS RKH    SEVSN+LE A+DN Y                                  
Sbjct: 61  SRSVRKHLHHGSEVSNELEAALDNSYRVEDGEKKKSSVSERKKRPESRNKPSARVQSEDE 120

Query: 121 --------------------------GTELKTETEDKPSGRVEIDVESSDRDKGVVAVEK 180
                                     G ELK E EDKP+ +VE+DVESSDRDKGVVAVEK
Sbjct: 121 RIWKTTMENGGNGKLEDVLGEDGKRKGGELKIEIEDKPNRKVEMDVESSDRDKGVVAVEK 180

Query: 181 KRKKH-KKSEDGLG----------------KSRISDNNGEIEATEDLVENNVARGKDRKK 240
           KRKKH KK+ED  G                KS+ SDNNG IEA+ + VENNVAR K  KK
Sbjct: 181 KRKKHKKKNEDKHGNIEDDERDSGARLSHNKSQNSDNNGNIEASGEFVENNVAREKVEKK 240

Query: 241 HEDKKSLG--------------DVKEEKSTNKDDDDENNLVEMST--KKKKKKKKREEDV 267
           HEDKKSLG              D++EEK  NKD+DD  ++V++ST  KKKKKKKKREEDV
Sbjct: 241 HEDKKSLGDEKDQVKTEVQRRRDIEEEKGINKDNDDGTDIVDLSTKKKKKKKKKKREEDV 300

[Close]

BLAST of Spg001296 vs. NCBI nr
Match: XP_022986894.1 (cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxima] >XP_022986896.1 cylicin-1-like [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 5.7e-77
Identity = 207/352 (58.81%), Postives = 225/352 (63.92%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKTVTGS+VSSKPIS+SKAASTLSSFLS DNGAS+A+CAYLRRASASFNELKQLHK+LKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPYGTE------------------------------- 120
           SRSDRKHR   SE SND E A DNP   E                               
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA 120

Query: 121 ------------------------LKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRKKH 180
                                   LKTE EDKP+ +VE+DVESSD+DK VVAVEKK KKH
Sbjct: 121 EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH 180

Query: 181 -KKSED----------------GLGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKK 240
            KKSED                   KSR SDNNGEIEA+   VENN+A GKDRKKH DKK
Sbjct: 181 QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK 240

Query: 241 SLGDVK--------------EEKSTNKDDDDENNLVEMSTKKKKKKKKREEDVDDLQNNS 267
           SLGD K              EEKSTNKD+DD     +   KKKKKKK REE+ DD QNNS
Sbjct: 241 SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS 300

[Close]

BLAST of Spg001296 vs. NCBI nr
Match: KAG7035443.1 (hypothetical protein SDJN02_02239, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.0 bits (759), Expect = 1.7e-76
Identity = 205/339 (60.47%), Postives = 226/339 (66.67%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKT+TG+VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHKDLKS
Sbjct: 1   MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPY---------------------------------- 120
           SRSDR  R    EVS+ LE AVD+ +                                  
Sbjct: 61  SRSDRNPRHHGFEVSSGLEAAVDSSHRIENGERIKSSVNESKSGKKRRESRDRNENEQDG 120

Query: 121 -----------------------GTELKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRK 180
                                    ELKTE E+KPS RVE+DV+SSDRD+ VV +EKK+K
Sbjct: 121 KTAMASGGNGDFEDVVGEDGKRRSDELKTEIEEKPSRRVEVDVKSSDRDESVVGIEKKKK 180

Query: 181 KH-KKSEDG-----------LGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKKSLG 240
           KH KKS+DG            GKS+ S NNGE EATED +ENNV RGKDRKKH+DK +LG
Sbjct: 181 KHKKKSKDGEDERDAEVGQSYGKSQTSANNGETEATEDFIENNVGRGKDRKKHKDKNNLG 240

Query: 241 DVKEEKSTNKDDDDENNLVEMST-------KKKKKKKKREEDVDDLQNNSGGAIEKEEMP 264
           D   EK T KD+DDE  LVE+ST       KKKKKKK REED DDLQNNSGGAIEKE+MP
Sbjct: 241 D---EKRTKKDNDDETGLVELSTKDKKKKKKKKKKKKNREEDDDDLQNNSGGAIEKEKMP 300

[Close]

BLAST of Spg001296 vs. NCBI nr
Match: KAG6605505.1 (hypothetical protein SDJN03_02822, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.4 bits (755), Expect = 4.8e-76
Identity = 204/338 (60.36%), Postives = 225/338 (66.57%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKT+TG+VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHKDLKS
Sbjct: 1   MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPY---------------------------------- 120
           SRSDR  R    EVS+ LE AVD+ +                                  
Sbjct: 61  SRSDRNPRHHGFEVSSGLEAAVDSSHRIENGERIKSSVNESKSGKKRRESRDRNENEQDG 120

Query: 121 -----------------------GTELKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRK 180
                                    ELKTE E+KPS RVE+DV+SSDRD+ VV +EKK+K
Sbjct: 121 KTAMASGGNGDFEDVVGEDGKRRSDELKTEIEEKPSRRVEVDVKSSDRDESVVGIEKKKK 180

Query: 181 KH-KKSEDG-----------LGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKKSLG 240
           KH KKS+DG            GKS+ S NNGE EATED +ENNV RGKDRKKH+DK +LG
Sbjct: 181 KHKKKSKDGEDERDAEVGQSYGKSQTSANNGETEATEDFIENNVGRGKDRKKHKDKNNLG 240

Query: 241 DVKEEKSTNKDDDDENNLVEMST------KKKKKKKKREEDVDDLQNNSGGAIEKEEMPV 264
           D   E  T KD+DDE  LVE+ST      KKKKKKK REED DDLQNNSGGAIEKE+MPV
Sbjct: 241 D---ENRTKKDNDDETGLVELSTKDKKKKKKKKKKKNREEDDDDLQNNSGGAIEKEKMPV 300

[Close]

BLAST of Spg001296 vs. NCBI nr
Match: XP_022947113.1 (DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata] >XP_022947114.1 DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 294.7 bits (753), Expect = 8.2e-76
Identity = 203/336 (60.42%), Postives = 224/336 (66.67%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKT+TG+VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHKDLKS
Sbjct: 1   MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPY---------------------------------- 120
           SRSDR  R    EVS+ LE AVD+ +                                  
Sbjct: 61  SRSDRNPRHHGFEVSSGLEAAVDSSHRIENGERIKSSVNESKSGKKRRESRDRNENEQDG 120

Query: 121 -----------------------GTELKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRK 180
                                    ELKTE E+KPS RVE+DV+SSDRD+ VV +EKK+K
Sbjct: 121 KTAMASGGNGDFEDVVGEDGKRRSDELKTEIEEKPSRRVEVDVKSSDRDESVVGIEKKKK 180

Query: 181 KH-KKSEDG-----------LGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKKSLG 240
           KH KKS+DG            GKS+ S NNGE EATED +ENNV RGKDRKKH+DK +LG
Sbjct: 181 KHKKKSKDGEDERDAEVGQSYGKSQTSANNGETEATEDFIENNVGRGKDRKKHKDKNNLG 240

Query: 241 DVKEEKSTNKDDDDENNLVEMST----KKKKKKKKREEDVDDLQNNSGGAIEKEEMPVSD 264
           D   EK T KD+DDE  LVE+ST    KKKKKKK REED DDLQNN GGAIEKE+MPVSD
Sbjct: 241 D---EKRTKKDNDDETGLVELSTKDKKKKKKKKKNREEDDDDLQNNGGGAIEKEKMPVSD 300

[Close]

BLAST of Spg001296 vs. ExPASy TrEMBL
Match: A0A6J1JCJ7 (cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.8e-77
Identity = 207/352 (58.81%), Postives = 225/352 (63.92%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKTVTGS+VSSKPIS+SKAASTLSSFLS DNGAS+A+CAYLRRASASFNELKQLHK+LKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPYGTE------------------------------- 120
           SRSDRKHR   SE SND E A DNP   E                               
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA 120

Query: 121 ------------------------LKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRKKH 180
                                   LKTE EDKP+ +VE+DVESSD+DK VVAVEKK KKH
Sbjct: 121 EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH 180

Query: 181 -KKSED----------------GLGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKK 240
            KKSED                   KSR SDNNGEIEA+   VENN+A GKDRKKH DKK
Sbjct: 181 QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK 240

Query: 241 SLGDVK--------------EEKSTNKDDDDENNLVEMSTKKKKKKKKREEDVDDLQNNS 267
           SLGD K              EEKSTNKD+DD     +   KKKKKKK REE+ DD QNNS
Sbjct: 241 SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS 300

[Close]

BLAST of Spg001296 vs. ExPASy TrEMBL
Match: A0A6J1G5Q5 (DEAD-box ATP-dependent RNA helicase 42-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451081 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 4.0e-76
Identity = 203/336 (60.42%), Postives = 224/336 (66.67%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKT+TG+VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHKDLKS
Sbjct: 1   MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPY---------------------------------- 120
           SRSDR  R    EVS+ LE AVD+ +                                  
Sbjct: 61  SRSDRNPRHHGFEVSSGLEAAVDSSHRIENGERIKSSVNESKSGKKRRESRDRNENEQDG 120

Query: 121 -----------------------GTELKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRK 180
                                    ELKTE E+KPS RVE+DV+SSDRD+ VV +EKK+K
Sbjct: 121 KTAMASGGNGDFEDVVGEDGKRRSDELKTEIEEKPSRRVEVDVKSSDRDESVVGIEKKKK 180

Query: 181 KH-KKSEDG-----------LGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKKSLG 240
           KH KKS+DG            GKS+ S NNGE EATED +ENNV RGKDRKKH+DK +LG
Sbjct: 181 KHKKKSKDGEDERDAEVGQSYGKSQTSANNGETEATEDFIENNVGRGKDRKKHKDKNNLG 240

Query: 241 DVKEEKSTNKDDDDENNLVEMST----KKKKKKKKREEDVDDLQNNSGGAIEKEEMPVSD 264
           D   EK T KD+DDE  LVE+ST    KKKKKKK REED DDLQNN GGAIEKE+MPVSD
Sbjct: 241 D---EKRTKKDNDDETGLVELSTKDKKKKKKKKKNREEDDDDLQNNGGGAIEKEKMPVSD 300

[Close]

BLAST of Spg001296 vs. ExPASy TrEMBL
Match: A0A6J1FSX8 (glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 8.8e-76
Identity = 206/355 (58.03%), Postives = 226/355 (63.66%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKTVTGS+VSSKPIS+SKAASTLSSFLS DNGAS+A+CAYLRRASASFNELKQLHK+LKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPYGTE------------------------------- 120
           SRSDRKHR   SE SND E +  NP+  E                               
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 ---------------------------LKTETEDKPSGRVEIDVESSDRDKGVVAVEKKR 180
                                      LKTE EDKP+ +VE+DVESSD+DK VVAVEKK 
Sbjct: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHKKS-------------EDG----LGKSRISDNNGEIEATEDLVENNVARGKDRKKHE 240
           KKHKK              EDG      KSR SDNNGEIEA+   VENN+A GKDRKKHE
Sbjct: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDVK--------------EEKSTNKDDDDENNLVEMSTKKKKKKKKREEDVDDLQ 267
           DKKSLGD K              EEKSTNKD+DD     +   KKKKKKK REE+ DD Q
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTK-KKKKKKKKKNREEEDDDFQ 300

[Close]

BLAST of Spg001296 vs. ExPASy TrEMBL
Match: A0A6J1G5Y0 (sarcoplasmic reticulum histidine-rich calcium-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451081 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67
Identity = 192/336 (57.14%), Postives = 211/336 (62.80%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKT+TG+VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHKDLKS
Sbjct: 1   MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPY---------------------------------- 120
           SRSDR  R    EVS+ LE AVD+ +                                  
Sbjct: 61  SRSDRNPRHHGFEVSSGLEAAVDSSHRIENGERIKSSVNESKSGKKRRESRDRNENEQDG 120

Query: 121 -----------------------GTELKTETEDKPSGRVEIDVESSDRDKGVVAVEKKRK 180
                                    ELKTE E+KPS RVE+DV+SSDRD+ VV +EKK+K
Sbjct: 121 KTAMASGGNGDFEDVVGEDGKRRSDELKTEIEEKPSRRVEVDVKSSDRDESVVGIEKKKK 180

Query: 181 KH-KKSEDG-----------LGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKKSLG 240
           KH KKS+DG            GKS+ S NNGE EATED +ENNV RGKDRKKH+DK +LG
Sbjct: 181 KHKKKSKDGEDERDAEVGQSYGKSQTSANNGETEATEDFIENNVGRGKDRKKHKDKNNLG 240

Query: 241 DVKEEKSTNKDDDDENNLVEMST----KKKKKKKKREEDVDDLQNNSGGAIEKEEMPVSD 264
           D   EK T KD+DDE  LVE+ST    KKKKKKK REED DDLQNN GGAIEKE      
Sbjct: 241 D---EKRTKKDNDDETGLVELSTKDKKKKKKKKKNREEDDDDLQNNGGGAIEKES----- 300

[Close]

BLAST of Spg001296 vs. ExPASy TrEMBL
Match: A0A0A0KCS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 6.4e-66
Identity = 194/356 (54.49%), Postives = 221/356 (62.08%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKTV GSVVSSKPIS+SKAASTLSSFLSADNGAS+ALCAYLRRAS SFNELKQLHK+LKS
Sbjct: 1   MKTVNGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKQLHKELKS 60

Query: 61  SRSDRKHRLRRSEVSNDLEVAVDNPY---------------------------------- 120
           S S RKH    SEVSN+ E A+ + Y                                  
Sbjct: 61  SCSVRKHLHHGSEVSNEFEAAIHDQYRVEDGDKNNSSVSEKKKRPDRKDRTTDKTSLRVQ 120

Query: 121 ---------------------------GTELKTETEDKPSGRVEIDVESSDRDKGVVAVE 180
                                      G+ELK E EDKPSG+VE+DVESSDRDK VVAVE
Sbjct: 121 SYNEQIGKTPMENGGNGNLEDVTGKKKGSELKIEIEDKPSGKVEMDVESSDRDKSVVAVE 180

Query: 181 KKRKKH-KKSED----------------GLGKSRISDNNGEIEATEDLVENNVARGKDRK 240
           KKRK+H KKSED                  GKS+ +DNN + EA+ + VENNVA GK RK
Sbjct: 181 KKRKRHKKKSEDRHDDIEDDERESGARLKHGKSQNTDNNCDAEASGEFVENNVANGKSRK 240

Query: 241 KHEDKKSL--------------GDVKEEKSTNKDDDDENNLVEMSTKKKKKKKKREEDVD 265
           K EDKK L              GDVKE KSTN D+D+  + V++S  KKKKK++REED D
Sbjct: 241 KLEDKKRLDDVKDQVKSEDQRRGDVKEGKSTNNDNDNGTDHVDLS-PKKKKKRRREED-D 300

[Close]

BLAST of Spg001296 vs. TAIR 10
Match: AT5G60030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-18
Identity = 99/270 (36.67%), Postives = 146/270 (54.07%), Query Frame = 0


Query: 1   MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
           MKTVTG VVS++PISLSKAA  LS F S+DNGASQ + AYLRRASA+F ELK  H+++KS
Sbjct: 1   MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREIKS 60

Query: 61  SR----SDRKHRLRRSEVSNDLEV---AVDNPYGTELKTETEDKPSGRVEIDVESSDRDK 120
                 SDR+ +   ++ S+D +     +D   G +++    +       + VES     
Sbjct: 61  KETKPSSDRETKSTETKQSSDAKSERNVIDEFDGRKIRYRNSE------AVSVES----- 120

Query: 121 GVVAVEKKRKKHKKSEDGLGKSRISDNNGEIEATEDLVENNVARGKDRKKHEDKKSLGDV 180
            V   E+  KK KKS+D      + +   E    E   E    R K++KK ++ K   DV
Sbjct: 121 -VYGRERDEKKMKKSKDA---DVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKD-EDV 180

Query: 181 KEEKSTNKDDDDENNLVEMSTKKKKKKKKREEDVDDLQNNSGGAIEKEEMPVSDSKELKR 240
            +EK   K +D++ +      KKKK KK  +EDV D         EKE++   + K  + 
Sbjct: 181 VDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVD---------EKEKLE-DEQKSAEI 240

Query: 241 KERKKRKNQDLQEEGGDDGSEEQQSTKRRK 264
           KE+KK K++D+ +E   +  E++Q +  RK
Sbjct: 241 KEKKKNKDEDVVDEKEKEKLEDEQRSGERK 244

[Close]

BLAST of Spg001296 vs. TAIR 10
Match: AT1G75335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 8.1e-13
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 0


Query: 1  MKTVTGSVVSSKPISLSKAASTLSSFLSADNGASQALCAYLRRASASFNELKQLHKDLKS 60
          MKTVTG V S+KPISLSKAA+ LS F+S++NGASQ + AYLRRAS +F ELK +H+++KS
Sbjct: 1  MKTVTGRVNSAKPISLSKAATLLSGFVSSENGASQDVSAYLRRASGAFIELKSIHREIKS 60

Query: 61 SR---SDRKHRLRRSEVSND 78
               S +K R    E+ ++
Sbjct: 61 KETKLSSKKKRKSHREMGSE 80

The following BLAST results are available for this feature:

BLAST of Spg001296 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902882.1	3.0e-78	58.50	probable xyloglucan galactosyltransferase GT11 [Benincasa hispida]	[more]
XP_022986894.1	5.7e-77	58.81	cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxi...	[more]
KAG7035443.1	1.7e-76	60.47	hypothetical protein SDJN02_02239, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6605505.1	4.8e-76	60.36	hypothetical protein SDJN03_02822, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022947113.1	8.2e-76	60.42	DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata] >XP_...	[more]

BLAST of Spg001296 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg001296 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCJ7	2.8e-77	58.81	cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1	[more]
A0A6J1G5Q5	4.0e-76	60.42	DEAD-box ATP-dependent RNA helicase 42-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1FSX8	8.8e-76	58.03	glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE...	[more]
A0A6J1G5Y0	1.5e-67	57.14	sarcoplasmic reticulum histidine-rich calcium-binding protein-like isoform X2 OS...	[more]
A0A0A0KCS1	6.4e-66	54.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1	[more]

BLAST of Spg001296 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60030.1	2.9e-18	36.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75335.1	8.1e-13	55.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..266
None	No IPR available	PANTHER	PTHR48227	DNA TOPOISOMERASE 1-LIKE	coord: 1..83 coord: 87..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001296.1	Spg001296.1	mRNA