Spg001144 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAAAAAACACCAAACAAAACAAAACTCTCTGTTGGTTTAGTGCATAAATAGGATCTTCCAATGTGAATTTCCTCAAAAGAAAAAACAGAGAAGACATGGGCACATGTGGAGAAGCCAGAGTTTTCACTGAAGAGCAAGAGGCACTTGTGATCAAGTCATGGAGTGTCATGAAAAAGAATGCTGCTGATTTGGCCCTCAAATTCTTCCTCAAGTAATATCAAACCTGACCCTTTTCTATCGATGTTTCCGTAAAGCGAAAGGTTCGTGTCGATGTATAGGAATTGATCGTTTTTTCTTTTGTGTGTTCTAGGATATTTGAAATCGCGCCATCGGCTCAAAAGATATTTCCTTTTCTGCGAGACGCCAAAGTTCCATTGGAGCAGAACCCGAAGTTGAAGCCTCATGCTTTGAATGTCTTCACTTTGGTAAGTTTTGTAACCAAACGTTGGCCTTGTTCTAAACATGGCGAGCGAGTCAAAGTTTGTTATTGATGTTGGAATTTTCTTTGGATTTTGTAGACTTGCGAGTCGGCCGTTCAGCTTCGGAAAGGTGGCATAGCAGCCGCCAGATATACCACCATGAAGAGGCTGGGCGCCACTCACTTCAAATACGGTGTTCTTGACGAACATTTCGAGGTATCGTAAATTCTATTTTGGTCTCAAAACTTAAACTCTATTGTTATTCGATCGGACTAGAACCGGATGATGAAACGTTTTCCTTAATAGGTTACAAAGTTTGCACTTTTGGAGACCATAAAGGAAGGAATTCCAGAGATGTGGAGTGTGGAAATGAAAGGGGCATGGGCTGAGGCTTATGACCAGTTGGTTGCTGCCATTAAAGCTGAGATGAAGCCTTCTTCTACCTCTTAAAACTTCTATCAAATTCGCTGTAGCGACGTCGTCTTATATGCTCAATTTTCAGTGTGGCTTAATAAATGCATGTTTTGTTCATAAAGAAAAGTGTTGTCTTTTTAAATTCAAAAGTTTCATTGATGGATTTGGATGTAATTTTCAGACTGTTTGAAAATATTAATTAATTAATGCCACGTTGAGTTATTTATTTA ATGGGCACATGTGGAGAAGCCAGAGTTTTCACTGAAGAGCAAGAGGCACTTGTGATCAAGTCATGGAGTGTCATGAAAAAGAATGCTGCTGATTTGGCCCTCAAATTCTTCCTCAAGATATTTGAAATCGCGCCATCGGCTCAAAAGATATTTCCTTTTCTGCGAGACGCCAAAGTTCCATTGGAGCAGAACCCGAAGTTGAAGCCTCATGCTTTGAATGTCTTCACTTTGACTTGCGAGTCGGCCGTTCAGCTTCGGAAAGGTGGCATAGCAGCCGCCAGATATACCACCATGAAGAGGCTGGGCGCCACTCACTTCAAATACGGTGTTCTTGACGAACATTTCGAGGTTACAAAGTTTGCACTTTTGGAGACCATAAAGGAAGGAATTCCAGAGATGTGGAGTGTGGAAATGAAAGGGGCATGGGCTGAGGCTTATGACCAGTTGGTTGCTGCCATTAAAGCTGAGATGAAGCCTTCTTCTACCTCTTAA ATGGGCACATGTGGAGAAGCCAGAGTTTTCACTGAAGAGCAAGAGGCACTTGTGATCAAGTCATGGAGTGTCATGAAAAAGAATGCTGCTGATTTGGCCCTCAAATTCTTCCTCAAGATATTTGAAATCGCGCCATCGGCTCAAAAGATATTTCCTTTTCTGCGAGACGCCAAAGTTCCATTGGAGCAGAACCCGAAGTTGAAGCCTCATGCTTTGAATGTCTTCACTTTGACTTGCGAGTCGGCCGTTCAGCTTCGGAAAGGTGGCATAGCAGCCGCCAGATATACCACCATGAAGAGGCTGGGCGCCACTCACTTCAAATACGGTGTTCTTGACGAACATTTCGAGGTTACAAAGTTTGCACTTTTGGAGACCATAAAGGAAGGAATTCCAGAGATGTGGAGTGTGGAAATGAAAGGGGCATGGGCTGAGGCTTATGACCAGTTGGTTGCTGCCATTAAAGCTGAGATGAAGCCTTCTTCTACCTCTTAA MGTCGEARVFTEEQEALVIKSWSVMKKNAADLALKFFLKIFEIAPSAQKIFPFLRDAKVPLEQNPKLKPHALNVFTLTCESAVQLRKGGIAAARYTTMKRLGATHFKYGVLDEHFEVTKFALLETIKEGIPEMWSVEMKGAWAEAYDQLVAAIKAEMKPSSTS Homology
BLAST of Spg001144 vs. NCBI nr
Match: XP_038902481.1 (uncharacterized protein LOC120089136 [Benincasa hispida]) HSP 1 Score: 302.0 bits (772), Expect = 3.1e-78 Identity = 149/161 (92.55%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of Spg001144 vs. NCBI nr
Match: XP_016902385.1 (PREDICTED: plastid division protein PDV2 [Cucumis melo]) HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77 Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Spg001144 vs. NCBI nr
Match: TYK13639.1 (plastid division protein PDV2 [Cucumis melo var. makuwa]) HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77 Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Spg001144 vs. NCBI nr
Match: XP_023006832.1 (plastid division protein PDV2-like [Cucurbita maxima]) HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76 Identity = 147/163 (90.18%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of Spg001144 vs. NCBI nr
Match: KAA0045947.1 (plastid division protein PDV2 [Cucumis melo var. makuwa]) HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76 Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy Swiss-Prot
Match: Q9FVL0 (Non-symbiotic hemoglobin 1 OS=Medicago sativa OX=3879 GN=MHB1 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 5.1e-63 Identity = 119/161 (73.91%), Postives = 138/161 (85.71%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy Swiss-Prot
Match: Q947C5 (Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum OX=3635 GN=HB1 PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 8.6e-63 Identity = 117/156 (75.00%), Postives = 134/156 (85.90%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy Swiss-Prot
Match: P23244 (Hemoglobin-2 OS=Casuarina glauca OX=3522 GN=HBII PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 7.3e-62 Identity = 116/156 (74.36%), Postives = 133/156 (85.26%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy Swiss-Prot
Match: P07803 (Non-symbiotic hemoglobin OS=Trema tomentosa OX=3480 GN=GLB1 PE=1 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.1e-61 Identity = 115/155 (74.19%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy Swiss-Prot
Match: P68168 (Non-legume hemoglobin OS=Parasponia andersonii OX=3476 PE=1 SV=2) HSP 1 Score: 234.6 bits (597), Expect = 8.1e-61 Identity = 113/155 (72.90%), Postives = 134/155 (86.45%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy TrEMBL
Match: A0A5D3CTW6 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001460 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 7.6e-78 Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy TrEMBL
Match: A0A1S4E332 (plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103498462 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 7.6e-78 Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy TrEMBL
Match: A0A6J1KWX0 (plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111499505 PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 8.4e-77 Identity = 147/163 (90.18%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy TrEMBL
Match: A0A5A7TVN3 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004930 PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76 Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Spg001144 vs. ExPASy TrEMBL
Match: A0A6J1G827 (plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111451618 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76 Identity = 146/163 (89.57%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of Spg001144 vs. TAIR 10
Match: AT2G16060.1 (hemoglobin 1 ) HSP 1 Score: 229.2 bits (583), Expect = 2.4e-60 Identity = 111/153 (72.55%), Postives = 130/153 (84.97%), Query Frame = 0
BLAST of Spg001144 vs. TAIR 10
Match: AT3G10520.1 (haemoglobin 2 ) HSP 1 Score: 159.1 bits (401), Expect = 3.1e-39 Identity = 78/149 (52.35%), Postives = 107/149 (71.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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