![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Spg001041 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGTGCTTTGAATGGGAACAGTCTGTAGGTTTTTGTGCAATAAAAAATAAAAATAAGAGTGTAATAGATATTTCATATTTTGTAGGAAGCCAATGAGCCTATTTTTGAAAACTGAAGTCGTTTCTTGAAATTCTCTAATGAATGGTATTTGGAATGAGAAGAGTCCATAGGTTTTTGTGTAATAAAAATAAGATTATAATAGATGTTGACTACTTTGTAGGAAGTCAATGAGTCGTTTTTTAAAAATTGAAGTCGTCTCTTAAAATTCTCTAATGAATGGTGCTTGGAATGAGAAAGGTTCATTGGTTTTGTGTAATGAAAATAAAGGGGTTCATTAATTAATAATGTATTGGTAGGGTTGTGCGACAGCTATCTTGACCCAATCCACTCTCTCTTTTCCATCTTGCATTTTGTCTTAATTCCAATATATCCAATAGAATTAGATAAAATAGGCATATGTTTAAAATTTGGAGTGAAAAAGGGAGAGATAAAGTTTCTCTCTATAGCATCTTTTATATATATAGTTATACATATATATAGAGAGTATAGATTTGAAGTATCATAAGGCCATTTAGCCCAAGTACCCAATCTTTTCTTGACGGTAAAATTAGGGCCTCCAATTTCTTCACGGCCTTCATTCTACAGTTTTCTCGGTTGAGTGGCTCTCATCTTCCTCATTCTGATAAACCGCCTCTCAGAATTTTGTTTGAGTGTATACGAACGTCAACAGGCACGTAGCTACTGCAAACTTTTCTTCCATTGCCGCTTATCTTACTTTTTTCGTCGACTTGGAACACTCTGTAAGTTTACCGCTTTCTTTCGCTTGTTTTCAATTTTGGCTTGTGTTTCGTTTCTATCTGTTTTTTCCTCCGGGTTTTGTCATTTATTCTTCTTGACCTCAAAGCTCTTTGCTTCACAGTGATAAGTTGCATTCCAGAGACAAAAGTGCGAAAGGGGGATCATCTATGAACTCGACGCATATGGAACCTGATATGGATTACAGAAATATCAAGAAGGAAATTGAGTTCCTGAGTAATTTCTCCTTTTCCCTCAGGAATTCAGCTCATTATTTTGTGCATGTATTGTATTTTGTAAAATTTCTTTGTGAACCTGTATATTTTGTGTGAATTTCATTATTTCAATCGTTTCCTTATTGATGTTAAGTGAATGGTTTGTTTCCCCTAAAATTCTATAGTCTGTATGAAAGTTTGGGTTCAATTTTCTTTTTCTTCAATGGTTTTCTGTTGGCCTTTATGATACACATGGAATTTTGCATTTGAGGAAAAGATACTACAAATCTTATATGGCAAACCCCCATTGCATTCGTTTTTTTTTTCTTTTTTCTGATGGAAAACGCAGAGACTATTTTATTTCAATGAAAGCAACGGATTAAATTTTCTTTTAACTGAATAATCTTAATATATTTATTAGACTTGTAATGCAGAAATATATGGTAGAGAATGAATCTTCTGAGTCTGTTAAGATGTCTGTACTAATTATTGTAGTGCAAGAGTAATATAGCGAAGAGCTTCGGTAGTTTGACTTTAGCAATCATACTTGTTATTTGACATCGAGCTCCAAAGAAATTGAATAGATGTTGGGACTATATTTAATGTGCATCTGCATCCTTGTAGTTCCTTTCAGATTCTGTTTCTGTGTACAAACTTCTGTTTAAACAATCTTCATAATCATGATCCCACTTAACCATAAGGTAGCTTCACTTGCTTTTACTTTAGATCCCTCCTCCGGTCCTGTGTCAATTTTTGCTAACCACAAAATTTAGTAATTGGTTTGATTGGTGCTAATCTGTTAGCCGTCGCCCTTTGTCTGTGTGTGCGGTTTTTGGATGCGGGGTTGAGTAGAAGGTAATAAAGAAAAAGGGTGCAAGTATCAAGTGGCTAATTTGCATTTGTTTCTTTATTTCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAAGAGATTGAGAACAGAAAAGTTGTGTCTCTGGGTGGAAAGGTACACTATGGATATGCATTCTGTAGGCTCAATTTCTTATGCAATCCTGAATGAATGTAATTCTTAAAGCTTACATCTATTGCATTTAGAGCATCAATCTTGTTTCCCGTTGTGCAGGGTCAAAAGAAGCAAAGACTGCCTCTAAGTGTAGCACGACCAATTATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCATCAGATAGGTGACTTCCAAGATTAATGTTTACTGCAATCTTCTTATGCCTACATTCACTTCTGTTGTTTGCAGAGTTTGAATCTTGGACTATTCGGGGGGATTGCTAGTAGCAATTCTAGAAGATCATCTGGTAAGCGCAAGCCTAAGGACCATGTTCTTAAGTCAAGCGAAGGCATTTTTAGAAAAGGAGTGCTTGATGTCAAGCATCTACTACACCGAGCTCCTACTAGGAATAGTGACTCTGGAAACGAAGTTGCCGGTAAGGGTAGAAGGAAGGGAGGTAAAAAGAAGAATAAAAGTAAGAAAAAGGGTGGTGGCAGCAAGAAACGCCATTAAAGTCATTCAATACCAAGAACATTCCTATTTTATAAGGGAATATGAATATGTATTGGCCTTATCAGTTATTGTAGTGCAATGGAATTTAGAGCATCCTTCTTTCTCAAGGCATGTAGGTTTAATACGTCCAATTCTAGAAATCTTGGTTTTGTTTTTGACATTTTTCTTCATATCTGGCTCGTTCATTTGGGAAGTAACTCGGGAATTGAAAATTCAAACAGAGGAATGTGCCAGTTATCTAGAAGTACAAGTTTTTCTTTTCTAAATAATAATTTTAAAGGAACAGAGATATGGGG ATGAATGGTGCTTTGAATGGGAACAGTCTTGATAAGTTGCATTCCAGAGACAAAAGTGCGAAAGGGGGATCATCTATGAACTCGACGCATATGGAACCTGATATGGATTACAGAAATATCAAGAAGGAAATTGAGTTCCTGAGTAATTTCTCCTTTTCCCTCAGGAATTCAGCTCATTATTTTAAGGTAATAAAGAAAAAGGGTGCAAGTATCAAGTGGCTAATTTGCATTTGTTTCTTTATTTCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAAGAGATTGAGAACAGAAAAGTTGTGTCTCTGGGTGGAAAGGGTCAAAAGAAGCAAAGACTGCCTCTAAGTGTAGCACGACCAATTATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGAGTTTGAATCTTGGACTATTCGGGGGGATTGCTAGTAGCAATTCTAGAAGATCATCTGGTAAGCGCAAGCCTAAGGACCATGTTCTTAAGTCAAGCGAAGGCATTTTTAGAAAAGGAGTGCTTGATGTCAAGCATCTACTACACCGAGCTCCTACTAGGAATAGTGACTCTGGAAACGAAGTTGCCGGTAAGGGTAGAAGGAAGGGAGGTAAAAAGAAGAATAAAAGTAAGAAAAAGGGTGGTGGCAGCAAGAAACGCCATTAA ATGAATGGTGCTTTGAATGGGAACAGTCTTGATAAGTTGCATTCCAGAGACAAAAGTGCGAAAGGGGGATCATCTATGAACTCGACGCATATGGAACCTGATATGGATTACAGAAATATCAAGAAGGAAATTGAGTTCCTGAGTAATTTCTCCTTTTCCCTCAGGAATTCAGCTCATTATTTTAAGGTAATAAAGAAAAAGGGTGCAAGTATCAAGTGGCTAATTTGCATTTGTTTCTTTATTTCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAAGAGATTGAGAACAGAAAAGTTGTGTCTCTGGGTGGAAAGGGTCAAAAGAAGCAAAGACTGCCTCTAAGTGTAGCACGACCAATTATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGAGTTTGAATCTTGGACTATTCGGGGGGATTGCTAGTAGCAATTCTAGAAGATCATCTGGTAAGCGCAAGCCTAAGGACCATGTTCTTAAGTCAAGCGAAGGCATTTTTAGAAAAGGAGTGCTTGATGTCAAGCATCTACTACACCGAGCTCCTACTAGGAATAGTGACTCTGGAAACGAAGTTGCCGGTAAGGGTAGAAGGAAGGGAGGTAAAAAGAAGAATAAAAGTAAGAAAAAGGGTGGTGGCAGCAAGAAACGCCATTAA MNGALNGNSLDKLHSRDKSAKGGSSMNSTHMEPDMDYRNIKKEIEFLSNFSFSLRNSAHYFKVIKKKGASIKWLICICFFISASSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPKDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH Homology
BLAST of Spg001041 vs. NCBI nr
Match: XP_022944773.1 (uncharacterized protein LOC111449125 [Cucurbita moschata]) HSP 1 Score: 231.5 bits (589), Expect = 7.1e-57 Identity = 139/211 (65.88%), Postives = 150/211 (71.09%), Query Frame = 0
BLAST of Spg001041 vs. NCBI nr
Match: XP_022985670.1 (uncharacterized protein LOC111483659 [Cucurbita maxima]) HSP 1 Score: 229.9 bits (585), Expect = 2.1e-56 Identity = 138/211 (65.40%), Postives = 150/211 (71.09%), Query Frame = 0
BLAST of Spg001041 vs. NCBI nr
Match: KAG7010308.1 (hypothetical protein SDJN02_27101 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 229.2 bits (583), Expect = 3.5e-56 Identity = 138/211 (65.40%), Postives = 149/211 (70.62%), Query Frame = 0
BLAST of Spg001041 vs. NCBI nr
Match: XP_023511857.1 (uncharacterized protein LOC111776750 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.8 bits (582), Expect = 4.6e-56 Identity = 137/211 (64.93%), Postives = 150/211 (71.09%), Query Frame = 0
BLAST of Spg001041 vs. NCBI nr
Match: XP_022152964.1 (uncharacterized protein LOC111020577 [Momordica charantia] >XP_022152965.1 uncharacterized protein LOC111020577 [Momordica charantia]) HSP 1 Score: 219.9 bits (559), Expect = 2.1e-53 Identity = 136/218 (62.39%), Postives = 151/218 (69.27%), Query Frame = 0
BLAST of Spg001041 vs. ExPASy TrEMBL
Match: A0A6J1FZ06 (uncharacterized protein LOC111449125 OS=Cucurbita moschata OX=3662 GN=LOC111449125 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 3.4e-57 Identity = 139/211 (65.88%), Postives = 150/211 (71.09%), Query Frame = 0
BLAST of Spg001041 vs. ExPASy TrEMBL
Match: A0A6J1JBZ2 (uncharacterized protein LOC111483659 OS=Cucurbita maxima OX=3661 GN=LOC111483659 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 1.0e-56 Identity = 138/211 (65.40%), Postives = 150/211 (71.09%), Query Frame = 0
BLAST of Spg001041 vs. ExPASy TrEMBL
Match: A0A6J1DHM3 (uncharacterized protein LOC111020577 OS=Momordica charantia OX=3673 GN=LOC111020577 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 1.0e-53 Identity = 136/218 (62.39%), Postives = 151/218 (69.27%), Query Frame = 0
BLAST of Spg001041 vs. ExPASy TrEMBL
Match: A0A1S3BNE0 (uncharacterized protein LOC103491457 OS=Cucumis melo OX=3656 GN=LOC103491457 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 9.7e-52 Identity = 133/223 (59.64%), Postives = 149/223 (66.82%), Query Frame = 0
BLAST of Spg001041 vs. ExPASy TrEMBL
Match: A0A0A0KEY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429080 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 6.3e-51 Identity = 132/223 (59.19%), Postives = 148/223 (66.37%), Query Frame = 0
BLAST of Spg001041 vs. TAIR 10
Match: AT2G44820.2 (unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 139.4 bits (350), Expect = 3.4e-33 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of Spg001041 vs. TAIR 10
Match: AT2G44820.1 (unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 139.4 bits (350), Expect = 3.4e-33 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|