Spg000995 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000995
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CCHC-type domain-containing protein
Location	scaffold8: 44470743 .. 44471693 (+)
RNA-Seq Expression	Spg000995
Synteny	Spg000995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACATAGTAGTGCTGCCCTACAAACGCATGGTATATGGCAGAGCGCAATTGGGTATGACCCATATGCACCAAACAAGGATGATAACAAGAACACTGCACAACAAAACCCTGCTAGCTCCGAGCCAGAAGCAGAGAATGCATATGCAAGCTTTCAGGGTCTTCTTGCACTTGCTCGCATAACTGGTTCCAATGCCAATGAGGTTCGTGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGTTTTCAGTGCAGGAATTTCTTGAGTGTTAAGAATGATAAGGAGAAAGACCCAGAAGCTATCCATGCTGATGTTATGTCTGAGCTAGATAAATTAAAAGGAAATATGGGTAAGGGGAATGGAAAAGGTGCGGTTGAGAGTGATGAGGAGAGTGAGGAGGATGAGAGTGAAAGTTCTGACTCAGATGCTGATTCAGAGATTGAGAGGATTATTGCTGAAAGGGAAGGGAAAAGAACCAGTAAGAGAAGATCATTGAAAAGAAAGGATGATTTGGTCGATGATGGATCGGGTTCTGATTCGAAAGAGAAGAAGAGGGGAAGGTCAAAAAGGAGGAGCAGAAGATCCAATGATTCAGATGACAACAGAAGGAAGAGGAGAAAGGAGAAACACAGAAAAAGGGAAGATTCATCGGATGAGGGTGAAAAACTAAAGCGACATCATAGAAAGAGTAGAAAAGAAAAGAGAAGGAGAAGAAGCCATAGATATTCTGATGACTCTGATTCTGATACATCGGAGGAATCTCATGGAAGGCACAAACACAAGAGTAGGAAGGCTGCATCATTGACTGATTCTGAAGCTAGCAGCTCTGATGATACAAGGGGTAGAGCAAGAAAACGCTCTGAGAAGAGGAGCAGGAAACATCGTCATGAGCAGGATGAATAG

mRNA sequence

ATGCCCGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACATAGTAGTGCTGCCCTACAAACGCATGGTATATGGCAGAGCGCAATTGGGTATGACCCATATGCACCAAACAAGGATGATAACAAGAACACTGCACAACAAAACCCTGCTAGCTCCGAGCCAGAAGCAGAGAATGCATATGCAAGCTTTCAGGGTCTTCTTGCACTTGCTCGCATAACTGGTTCCAATGCCAATGAGGTTCGTGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGTTTTCAGTGCAGGAATTTCTTGAGTGTTAAGAATGATAAGGAGAAAGACCCAGAAGCTATCCATGCTGATGTTATGTCTGAGCTAGATAAATTAAAAGGAAATATGGGTAAGGGGAATGGAAAAGGTGCGGTTGAGAGTGATGAGGAGAGTGAGGAGGATGAGAGTGAAAGTTCTGACTCAGATGCTGATTCAGAGATTGAGAGGATTATTGCTGAAAGGGAAGGGAAAAGAACCAGTAAGAGAAGATCATTGAAAAGAAAGGATGATTTGGTCGATGATGGATCGGGTTCTGATTCGAAAGAGAAGAAGAGGGGAAGGTCAAAAAGGAGGAGCAGAAGATCCAATGATTCAGATGACAACAGAAGGAAGAGGAGAAAGGAGAAACACAGAAAAAGGGAAGATTCATCGGATGAGGGTGAAAAACTAAAGCGACATCATAGAAAGAGTAGAAAAGAAAAGAGAAGGAGAAGAAGCCATAGATATTCTGATGACTCTGATTCTGATACATCGGAGGAATCTCATGGAAGGCACAAACACAAGAGTAGGAAGGCTGCATCATTGACTGATTCTGAAGCTAGCAGCTCTGATGATACAAGGGGTAGAGCAAGAAAACGCTCTGAGAAGAGGAGCAGGAAACATCGTCATGAGCAGGATGAATAG

Coding sequence (CDS)

ATGCCCGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACATAGTAGTGCTGCCCTACAAACGCATGGTATATGGCAGAGCGCAATTGGGTATGACCCATATGCACCAAACAAGGATGATAACAAGAACACTGCACAACAAAACCCTGCTAGCTCCGAGCCAGAAGCAGAGAATGCATATGCAAGCTTTCAGGGTCTTCTTGCACTTGCTCGCATAACTGGTTCCAATGCCAATGAGGTTCGTGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGTTTTCAGTGCAGGAATTTCTTGAGTGTTAAGAATGATAAGGAGAAAGACCCAGAAGCTATCCATGCTGATGTTATGTCTGAGCTAGATAAATTAAAAGGAAATATGGGTAAGGGGAATGGAAAAGGTGCGGTTGAGAGTGATGAGGAGAGTGAGGAGGATGAGAGTGAAAGTTCTGACTCAGATGCTGATTCAGAGATTGAGAGGATTATTGCTGAAAGGGAAGGGAAAAGAACCAGTAAGAGAAGATCATTGAAAAGAAAGGATGATTTGGTCGATGATGGATCGGGTTCTGATTCGAAAGAGAAGAAGAGGGGAAGGTCAAAAAGGAGGAGCAGAAGATCCAATGATTCAGATGACAACAGAAGGAAGAGGAGAAAGGAGAAACACAGAAAAAGGGAAGATTCATCGGATGAGGGTGAAAAACTAAAGCGACATCATAGAAAGAGTAGAAAAGAAAAGAGAAGGAGAAGAAGCCATAGATATTCTGATGACTCTGATTCTGATACATCGGAGGAATCTCATGGAAGGCACAAACACAAGAGTAGGAAGGCTGCATCATTGACTGATTCTGAAGCTAGCAGCTCTGATGATACAAGGGGTAGAGCAAGAAAACGCTCTGAGAAGAGGAGCAGGAAACATCGTCATGAGCAGGATGAATAG

Protein sequence

MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHADVMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRSLKRKDDLVDDGSGSDSKEKKRGRSKRRSRRSNDSDDNRRKRRKEKHRKREDSSDEGEKLKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGRARKRSEKRSRKHRHEQDE

Homology

[Close]

BLAST of Spg000995 vs. NCBI nr
Match: KAG7010551.1 (CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.1 bits (1346), Expect = 1.7e-144
Identity = 298/318 (93.71%), Postives = 309/318 (97.17%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK++AQQN ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRS 180
           VMSELDKLKGN+GKGNGKGAVESDEESEE+ESESSDSDADSEIERIIAEREGKRTSK+RS
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRS 180

Query: 181 LKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGEK 240
           LKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  SNDSDD+RRKRRKEKHRKR+DSSDEGE 
Sbjct: 181 LKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGET 240

Query: 241 LKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGR 300
           +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKSRK ASLTDSE SSSDDTRGR
Sbjct: 241 IKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSRKTASLTDSEDSSSDDTRGR 300

Query: 301 ARKRSEKRSRKHRHEQDE 317
           ARKRSEKRSRKHR+E+DE
Sbjct: 301 ARKRSEKRSRKHRYEEDE 318

[Close]

BLAST of Spg000995 vs. NCBI nr
Match: XP_022943818.1 (CAX-interacting protein 4 [Cucurbita moschata])

HSP 1 Score: 519.6 bits (1337), Expect = 1.9e-143
Identity = 297/318 (93.40%), Postives = 309/318 (97.17%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK++AQQN ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRS 180
           VMSELDKLKGN+GKGNGKGAVESDEESEE+ESESSDSDADSEIERIIAEREGKRTSK+RS
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRS 180

Query: 181 LKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGEK 240
           LKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  SNDSDD+RRKRRKEKHRKR+DSSDEGE 
Sbjct: 181 LKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGET 240

Query: 241 LKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGR 300
           +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+KAASLTDSE SSS DTRGR
Sbjct: 241 IKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR 300

Query: 301 ARKRSEKRSRKHRHEQDE 317
           ARKRSEKRSRKHR+E+DE
Sbjct: 301 ARKRSEKRSRKHRYEEDE 318

[Close]

BLAST of Spg000995 vs. NCBI nr
Match: XP_022986903.1 (CAX-interacting protein 4 [Cucurbita maxima])

HSP 1 Score: 518.8 bits (1335), Expect = 3.2e-143
Identity = 297/318 (93.40%), Postives = 308/318 (96.86%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK++AQQN ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRS 180
           VMSELDKLKGN+GKGNGKGAVESDEESEE+ESESSDSDADSEIERIIAEREGKRTSK+RS
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRS 180

Query: 181 LKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGEK 240
           LKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  SNDSDDNRRKRRKEKHRKR+DSSDEGEK
Sbjct: 181 LKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDNRRKRRKEKHRKRDDSSDEGEK 240

Query: 241 LKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGR 300
           +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHK K RKAASLTDS+ SSSDD RGR
Sbjct: 241 IKRPHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKLKGRKAASLTDSDDSSSDDIRGR 300

Query: 301 ARKRSEKRSRKHRHEQDE 317
           ARKRSEKRSRKHR+E+DE
Sbjct: 301 ARKRSEKRSRKHRYEEDE 318

[Close]

BLAST of Spg000995 vs. NCBI nr
Match: XP_023511989.1 (CAX-interacting protein 4 [Cucurbita pepo subsp. pepo] >XP_023511990.1 CAX-interacting protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.0 bits (1325), Expect = 4.6e-142
Identity = 295/318 (92.77%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK++AQQN ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRS 180
           VMSELDKLKGN+GKGNGKGAVES+EESEE+ESESSDSDADSEIERIIAEREGKRTSK+RS
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESEEESEEEESESSDSDADSEIERIIAEREGKRTSKKRS 180

Query: 181 LKRKDDLVDDGSGSDSKEKKRGRSKRRS--RRSNDSDDNRRKRRKEKHRKREDSSDEGEK 240
           LKRKDDLVDDGSGSDS+EKKRGRSKRRS  R SNDSDD+RRKRRKEK RK +DSSDEGE 
Sbjct: 181 LKRKDDLVDDGSGSDSREKKRGRSKRRSSRRESNDSDDSRRKRRKEKRRKIDDSSDEGET 240

Query: 241 LKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGR 300
           +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKSRKAASLTDSE SSSDDTRGR
Sbjct: 241 IKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSRKAASLTDSEDSSSDDTRGR 300

Query: 301 ARKRSEKRSRKHRHEQDE 317
           ARKRSEKRSRKHR+E+DE
Sbjct: 301 ARKRSEKRSRKHRYEEDE 318

[Close]

BLAST of Spg000995 vs. NCBI nr
Match: XP_022148397.1 (CAX-interacting protein 4 isoform X1 [Momordica charantia] >XP_022148398.1 CAX-interacting protein 4 isoform X1 [Momordica charantia])

HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-138
Identity = 297/319 (93.10%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN+AQ N ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTS-KRR 180
           VMSELDKLKGN+GK  GKGAVESDEESEEDESESSDSD DSEIERIIAER GK+ S K+R
Sbjct: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKGSGKKR 180

Query: 181 SLKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGE 240
           SLKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  S+DSDDNRRKRRKEKHRKR+DSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRG 300
           KLKR HRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK ASLTDSEASSSDDTRG
Sbjct: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300

Query: 301 RARKRSEKRSRKHRHEQDE 317
           RARKRSEKRSRKHR E DE
Sbjct: 301 RARKRSEKRSRKHRREVDE 316

[Close]

BLAST of Spg000995 vs. ExPASy Swiss-Prot
Match: Q84Y18 (CAX-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=CXIP4 PE=1 SV=2)

HSP 1 Score: 262.7 bits (670), Expect = 5.4e-69
Identity = 197/340 (57.94%), Postives = 232/340 (68.24%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   T QQ       + E
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPTSKEEPKTTQQ----KTEDPE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           N+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQCRNFLS K DKEKDP AI A 
Sbjct: 61  NSYASFQGLLALARITGSNNDEARGSCKKCGRVGHLTFQCRNFLSTKEDKEKDPGAIEAA 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKR-----T 180
           V+S L+K++    +G GKG VE     EE+ESESSDSD DSE+ERIIAER GK+      
Sbjct: 121 VLSGLEKIR----RGVGKGEVEEVSSEEEEESESSDSDVDSEMERIIAERFGKKKGGSSV 180

Query: 181 SKRRSLKRKDDLVDDGSGSDSKE----------KKRGRSKRRS-RRSNDSDDNRRKRRKE 240
            K  S+++K   V D S SDS            KKR   KRRS   S D ++ R KRRKE
Sbjct: 181 KKTSSVRKKKKRVSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKE 240

Query: 241 KH-RKR-EDSSDEGEKL--KRHHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSR 300
           +  RKR ED SDE E    +R  RKSRKEKRRRRS R +SDDSDS++SE+   R + +  
Sbjct: 241 RRGRKRDEDDSDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDD--RRQKRRN 300

Query: 301 KAASLTDSEASSSDDTRGR----ARKRSEKRSRKHRHEQD 316
           K A+ +DSEA+ S D   R    + KRSEK+SRK  H ++
Sbjct: 301 KVAASSDSEANVSGDDVSRVGRGSSKRSEKKSRKRHHRKE 330

[Close]

BLAST of Spg000995 vs. ExPASy Swiss-Prot
Match: Q28EE8 (Protein SREK1IP1 OS=Xenopus tropicalis OX=8364 GN=srek1ip1 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-04
Identity = 62/196 (31.63%), Postives = 95/196 (48.47%), Query Frame = 0


Query: 75  ITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHADVMSELDKLKGNMGK 134
           + G N + +R  CK+CG  GHL+F+CRNFL V  D ++D   I  DV S           
Sbjct: 3   VPGVNKDNIRAGCKKCGYPGHLTFECRNFLRV--DPQRD---IVLDVSS----------- 62

Query: 135 GNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRSLKRKDDLVDDGSGS 194
                   +  E  EDESE        E+ R  A+++    + ++ LKRK          
Sbjct: 63  --------TSTEDSEDESE--------EVARAPADKKNVTDTGKKKLKRK---------- 122

Query: 195 DSKEKKRGRSKRRSRRSNDSDDNRRKRRKEKHRKREDSSDEGEKLKRHHRKSRKEKRRRR 254
             KEKK  + ++R   S++SDDN + ++++  +K +    + +K K+H +  RKEKR R+
Sbjct: 123 --KEKKLKKHRKRLHSSSESDDNSKAKKRKSQKKEKRVKHKAKKGKQHKKDKRKEKRERK 154

Query: 255 SHRYSDDSDSDTSEES 271
           S   S  S S  S  S
Sbjct: 183 SSSSSSSSSSSQSSSS 154

[Close]

BLAST of Spg000995 vs. ExPASy TrEMBL
Match: A0A6J1FXE5 (CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111448444 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 9.0e-144
Identity = 297/318 (93.40%), Postives = 309/318 (97.17%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK++AQQN ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRS 180
           VMSELDKLKGN+GKGNGKGAVESDEESEE+ESESSDSDADSEIERIIAEREGKRTSK+RS
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRS 180

Query: 181 LKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGEK 240
           LKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  SNDSDD+RRKRRKEKHRKR+DSSDEGE 
Sbjct: 181 LKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGET 240

Query: 241 LKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGR 300
           +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+KAASLTDSE SSS DTRGR
Sbjct: 241 IKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRGR 300

Query: 301 ARKRSEKRSRKHRHEQDE 317
           ARKRSEKRSRKHR+E+DE
Sbjct: 301 ARKRSEKRSRKHRYEEDE 318

[Close]

BLAST of Spg000995 vs. ExPASy TrEMBL
Match: A0A6J1JHW4 (CAX-interacting protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111484503 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.5e-143
Identity = 297/318 (93.40%), Postives = 308/318 (96.86%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK++AQQN ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRS 180
           VMSELDKLKGN+GKGNGKGAVESDEESEE+ESESSDSDADSEIERIIAEREGKRTSK+RS
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTSKKRS 180

Query: 181 LKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGEK 240
           LKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  SNDSDDNRRKRRKEKHRKR+DSSDEGEK
Sbjct: 181 LKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDNRRKRRKEKHRKRDDSSDEGEK 240

Query: 241 LKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGR 300
           +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHK K RKAASLTDS+ SSSDD RGR
Sbjct: 241 IKRPHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKLKGRKAASLTDSDDSSSDDIRGR 300

Query: 301 ARKRSEKRSRKHRHEQDE 317
           ARKRSEKRSRKHR+E+DE
Sbjct: 301 ARKRSEKRSRKHRYEEDE 318

[Close]

BLAST of Spg000995 vs. ExPASy TrEMBL
Match: A0A6J1D3Z8 (CAX-interacting protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017056 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 5.1e-139
Identity = 297/319 (93.10%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN+AQ N ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTS-KRR 180
           VMSELDKLKGN+GK  GKGAVESDEESEEDESESSDSD DSEIERIIAER GK+ S K+R
Sbjct: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKGSGKKR 180

Query: 181 SLKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGE 240
           SLKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  S+DSDDNRRKRRKEKHRKR+DSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRG 300
           KLKR HRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK ASLTDSEASSSDDTRG
Sbjct: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300

Query: 301 RARKRSEKRSRKHRHEQDE 317
           RARKRSEKRSRKHR E DE
Sbjct: 301 RARKRSEKRSRKHRREVDE 316

[Close]

BLAST of Spg000995 vs. ExPASy TrEMBL
Match: A0A6J1D3V6 (CAX-interacting protein 4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017056 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.5e-138
Identity = 295/316 (93.35%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN+AQ N ASSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTS-KRR 180
           VMSELDKLKGN+GK  GKGAVESDEESEEDESESSDSD DSEIERIIAER GK+ S K+R
Sbjct: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKGSGKKR 180

Query: 181 SLKRKDDLVDDGSGSDSKEKKRGRSKRRSRR--SNDSDDNRRKRRKEKHRKREDSSDEGE 240
           SLKRKDDLVDDGSGSDS+EKKRGRSKRRSRR  S+DSDDNRRKRRKEKHRKR+DSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRG 300
           KLKR HRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK ASLTDSEASSSDDTRG
Sbjct: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300

Query: 301 RARKRSEKRSRKHRHE 314
           RARKRSEKRSRKHR E
Sbjct: 301 RARKRSEKRSRKHRRE 313

[Close]

BLAST of Spg000995 vs. ExPASy TrEMBL
Match: A0A0A0KHA7 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G190420 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 2.2e-137
Identity = 288/316 (91.14%), Postives = 299/316 (94.62%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN AQQN ASSEP+AE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNAAQQNTASSEPDAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAI AD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKRTSKRRS 180
           VMSELDKLKG      GKG VES+EESEE+ESESSDSDADSEIERIIAEREGKR SK+RS
Sbjct: 121 VMSELDKLKG------GKGKVESEEESEEEESESSDSDADSEIERIIAEREGKRNSKKRS 180

Query: 181 LKRKDDLVDDGSGSDSKEKKRGRSKRRSRR-SNDSDDNRRKRRKEKHRKREDSSDEGEKL 240
           LKRKDD VDD SGSDS+EKKRGRSKRRSRR SNDSDD+RRKRRKEKHRKR+DSSDE EK 
Sbjct: 181 LKRKDDSVDDASGSDSREKKRGRSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEDEKH 240

Query: 241 KRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKAASLTDSEASSSDDTRGRA 300
           +RHHRKSRKEKRRRRSHRYSDDSDSDTSEE+HGRHKHKSRKAASLTDSEASSSDDTRGRA
Sbjct: 241 RRHHRKSRKEKRRRRSHRYSDDSDSDTSEETHGRHKHKSRKAASLTDSEASSSDDTRGRA 300

Query: 301 RKRSEKRSRKHRHEQD 316
           RKRSEKRSRKHR+E +
Sbjct: 301 RKRSEKRSRKHRYEDE 310

[Close]

BLAST of Spg000995 vs. TAIR 10
Match: AT2G28910.1 (CAX interacting protein 4 )

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-70
Identity = 197/340 (57.94%), Postives = 232/340 (68.24%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNTAQQNPASSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   T QQ       + E
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPTSKEEPKTTQQ----KTEDPE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIHAD 120
           N+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQCRNFLS K DKEKDP AI A 
Sbjct: 61  NSYASFQGLLALARITGSNNDEARGSCKKCGRVGHLTFQCRNFLSTKEDKEKDPGAIEAA 120

Query: 121 VMSELDKLKGNMGKGNGKGAVESDEESEEDESESSDSDADSEIERIIAEREGKR-----T 180
           V+S L+K++    +G GKG VE     EE+ESESSDSD DSE+ERIIAER GK+      
Sbjct: 121 VLSGLEKIR----RGVGKGEVEEVSSEEEEESESSDSDVDSEMERIIAERFGKKKGGSSV 180

Query: 181 SKRRSLKRKDDLVDDGSGSDSKE----------KKRGRSKRRS-RRSNDSDDNRRKRRKE 240
            K  S+++K   V D S SDS            KKR   KRRS   S D ++ R KRRKE
Sbjct: 181 KKTSSVRKKKKRVSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKE 240

Query: 241 KH-RKR-EDSSDEGEKL--KRHHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSR 300
           +  RKR ED SDE E    +R  RKSRKEKRRRRS R +SDDSDS++SE+   R + +  
Sbjct: 241 RRGRKRDEDDSDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDD--RRQKRRN 300

Query: 301 KAASLTDSEASSSDDTRGR----ARKRSEKRSRKHRHEQD 316
           K A+ +DSEA+ S D   R    + KRSEK+SRK  H ++
Sbjct: 301 KVAASSDSEANVSGDDVSRVGRGSSKRSEKKSRKRHHRKE 330

The following BLAST results are available for this feature:

BLAST of Spg000995 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010551.1	1.7e-144	93.71	CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943818.1	1.9e-143	93.40	CAX-interacting protein 4 [Cucurbita moschata]	[more]
XP_022986903.1	3.2e-143	93.40	CAX-interacting protein 4 [Cucurbita maxima]	[more]
XP_023511989.1	4.6e-142	92.77	CAX-interacting protein 4 [Cucurbita pepo subsp. pepo] >XP_023511990.1 CAX-inter...	[more]
XP_022148397.1	1.1e-138	93.10	CAX-interacting protein 4 isoform X1 [Momordica charantia] >XP_022148398.1 CAX-i...	[more]

BLAST of Spg000995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84Y18	5.4e-69	57.94	CAX-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=CXIP4 PE=1 SV=2	[more]
Q28EE8	1.2e-04	31.63	Protein SREK1IP1 OS=Xenopus tropicalis OX=8364 GN=srek1ip1 PE=2 SV=1	[more]

BLAST of Spg000995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXE5	9.0e-144	93.40	CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111448444 PE=4 SV=...	[more]
A0A6J1JHW4	1.5e-143	93.40	CAX-interacting protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111484503 PE=4 SV=1	[more]
A0A6J1D3Z8	5.1e-139	93.10	CAX-interacting protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1D3V6	2.5e-138	93.35	CAX-interacting protein 4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A0A0KHA7	2.2e-137	91.14	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G190420 P...	[more]

BLAST of Spg000995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28910.1	3.8e-70	57.94	CAX interacting protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 83..107 e-value: 1.7E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..272
None	No IPR available	PANTHER	PTHR31437	SREK1IP1 FAMILY MEMBER	coord: 1..274
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 87..102 score: 8.960441

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000995.1	Spg000995.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding