Spg000916 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000916
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription initiation factor IIA subunit 1-like
Location	scaffold8: 44295059 .. 44301912 (+)
RNA-Seq Expression	Spg000916
Synteny	Spg000916

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCTTTCTTGTCCGCCTCTCTCCTCTTTCCCTTTCTCTCTCCCCTTCTCTCTCTCTCCCTCTCTTTCTCTCTCTCCCTCTTCTCGTCTCTCCTCTCCCTCGCCTCATCTGCCCTTCTACTTCACAGAACTCTACAAATTCAAGAAGCTCATACGGATCGTATGGATCTTCTTCCTTGATTTTTCTCTCCAATTTTCTAGAAGTTTCGATTCTGGGTTTCGCTAGTGGAGGGAATCGGAGGTAGACAGAGCGAGGCGGATCCGTTATGGCGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGCGACGAGTTCATTGATAATGGTCCTGGAGAGGACGTTCTCAAGGAGCTTCAAGGAGTAATTCTTGATCTCCAATCTTGAAAATCTTGTTATTCTTCTTTGCCTTATACTCTTAGCTGGTTTAGTAAAATGAATATTTTAATTTGTTCGTCAATCTATTTGAAGGAATCGATTGAATTTTTTCGGTGATTACCTTCTGGGTTTGATCGGGTTGTTTCTAGGGTTTTGAGGCTTTGAAGCTAATTTAAGCTGTGGTTGGGCTGATTGTCTATGTTTATGGGAATTTTTTAGATGTGGGAGGCGAAAATGATGCAAGCGGGTGCCGTGAGCGGTCCCATAGAGAGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCGATAACTCCGGTTCACGATCTCAATGTTCCATATGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGATTTACTCTTTCCGCCGGTGAGTATTCCTGTCCCTTATACTAATTGTTTCCCGAAGTTCGTACTTCGATAATCGAAGCGATTTTTGGAAATTGTAGACGCCATTACAAACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCAACTGGACCCAGTGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGCGCTAATAATGTTGAGGTCAGATCTGGAAGGCCAAACCCGTATATGGTAATTACTACTTGACTTTGATGCCACTGCCACTTTTTACATTTTCTCATTTCCTGCAGTTTCCCCACCCCATACTGTCACGGTTGCAGTATTTTGTTCACCTTTATTTCTTTTTATAAAAGAAATGGTTATATGTAGTCTTGGTAGTCGTTAATTTGATTTTAAGTGGAAGAATGGCATCGATATGATTTTACCATCAATATTTTATATTATGCTGTTGATAGTTGAACATGCCATTCATTGGGGTATTTGATAGACGTCTACATTCTTGTTTCAGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGGTGAGTTTAGTGTCGAAGCGGTGAAAAAGTTTTCACACCAAGAATTCTGCGGTAATATATATTGATTGCATTTTTGTAGCCTATGTGGAGGGGCGTGATGAAGCAGACAGGGGAGCGGCTCACCCATCCCATACACAGGTAACTCTTTTCTTGACTCGTACTTCCATCATGAAAAAAATTGTTGCCTGATGTGAAACCCAGAACTCCACCATGCATTATATCTGCTTCTCATTTAATTACTCTACTCCTTGCTGCCATTTATCTATCAGCACACAACTTCAGTATGATGTTTTAACCAAGGGAAATGATCTTCAGGACTTTTTCTTGATGAACTCTGGGAAGCGAAAGCGTGACGATTTTGCTTCCCAGTACCAGACTAGTGGTTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAATAGTATCTTTGAGATTGAGGTCTTGTTTTCTTACCTACTTGTCTGTACCCTAGGAGATTCTTTTCAACCTTGGACTTGTATGCCAATTTTCTTTCACGTAATTTCAGTTCATTGTCTTGCGTGAGTGCGAGTTAGTAACAGTAACAACAGTAACAACGTCTTCCATTTTTCTTTTCTTTTCCCTTGGGGTGGATGCTTATAATTCTTTTTCCTGCATGATTGTCGTGTACATGATATAGCAAGACATACTAACATATGGAGCCATGCTACCTCCTAATAAGCTAAGGAATGTTGTAATTTCCCTTCAATTTACGGAAACCATTAAACATATATATATTTTCTGGTTTAAGTGTATGTGATACAAAATTAATACTTGACATGGAAACTTCTGCTATTTTTTTCATCGCTGTAAAAAACCACACAATAACTCAAAATGAATTCCACAATGGAGGGGAAAGTGACAGGTTCTCATTCAAGTTCAACTATAGATACATTTCTCTTTATGTAAATTGAAAAATTCCAGATTATTCGAGAGGCCTAGTCTTTAATTGACAAGCTGATTCTGATTTTCCAATGACCTCAACAATTGCCAATGTTTCTCTACAATACTCGTTCTAACGTAGGAATGTTCTATGACAAACTCCAAGTCATCCCTTAACAGAACTATCTAACTAACCAGCCTTACGTAGCCAAGATTTGACTATCTTTATTTATCAGCTTGCTTCTGCTGCCTCGCTTAGGAGGTTGCTATTGTCTATAAGAGAAATGAGAAAATCTCAGTACTCTTTTAGATTTGTAATATTCTTGACTGTAAATTCTGACCTTTATATTCTCTTACTCATAAAATTTTTTTCGGGTGACTAGACTCTGAGAGCCTACAAGATAATCTAGGAAGGCAAGTCAAAGGGTGGCTCTGCATTATGGACTCAGCTAGAAAGGGTTATTTGATTCAGATGTAATTTACCAGTAGAAGAATTAGTGTTGCCATTTGAATTATCTAGAGGTCAAGTGACTCCTCCTAGGTGTCTGTTTTAAAGGAACTGTTTGTAAAGGCTACATTATGGTCTGTGGCATTTGGATCATCAGTCATATTCTCAATGAGGTTGACTATCTTTTCTAACCATGAGACCCCAACCCCTCCAACTACCGGAAGCTATGAGCTAAGAAGCATGGTCATAAATATAAGACATTGTACACACCTTAATTTCTAAAAATATAGGATAGGACAGGACAAGAACACGTTTATTATGACACATTTTTAAAATATAAATATCATATTTAAGTTTATACACACACACACACTTCAATAATTCTCATACTAAAAATTTGTTTTAGTTTATGATGCTTATGCTTTTATGATACAATATTTTATGTCAAAATATTCAAGGATACATCCAACCAATAATCAAATTTTATGGCAAACCAACTTTCATCAAGAAGATGTCTTGGGAGGAGATTTGGAATATCATTGGGCTTAATACCTCTTTGCTATTTTTAAGAGTTTTTGTAATTACCAGTTAGGTGTTAGTTAAGTGTTCTTTTGGGTTGGACTCATTTTGTTAGGTTGTATGCTCCATTACCCTTGCACATTCTTTCATTTCGTCTCCCATTTTTCTCAAAGAAAGCAAAAACTTGGCTTCTTATCTAAAAACTTCCATTAAGAAGATGAAAGATCCACTAAAAGACGGGTCAGACTGATACAAGGCAAACACCCCGCAAGAAAATTACAAAAAAGGCTCCCAAGTCTTTGTAACCAAAAGTAAAGAATAATTTTGAAATAAATTAGAATTGAGAACCCTAAGAGAAGTATTAAGAAAAGTCACTTCCCAAAATTCTCCCAAGAACTCTCTCTTTTGAGGAACACTTTCCTTTTCCTTTTCCTTTCTAGCTAGATAAACCACAAAATAACCCATATCCGGCTGCCAAAGAATCCCTTCCCTGGAGGATCTGCAACAGCCTGTTCTAATGCCTCTTGAATGCTCTAACTCGACAAAAAGACCGAACTTCTCAAAGGATTTTTAACATCATAACAAAATGTAAATTTAAAGTCAACAATGCTTATGCGTTGATTAATTCTGTCTTTTCTCTGTCACTTGCAGTTTAATTTCTCTTTTCACCATGCTAATTGTACTTATTTTATTTCCTCCATCTGCTGCTGAAACTTTTAAAAGGGAGAATATTCTCTTGAGCCTGTTCAACAATTTTTTTTTTAAAAAAAATTGAACTGTTAAAAGTTATGACTTAATAGAACTCACGTGATTACATTTTGCTATTCGCTTTTGTTAACTATGATCAGTCTTTGAAACTCCTTAGTGATAAGCTTTTGCAGATAAGTGGATGCAATGCTTCTGATGGGAGACCTGGCATCATCACTTCTGCAAACAGTGCTACATCATCACATATTGCAAGATCATTATTGAAGATTCCTCAATTTGATGGACCCATACCTGATCCTTATGATGATGTGCTTTCGACACCCAATGTTAGTTCTTTCTCTCTCCTCTCCTTAAAGTTATAAAATTGTCTATCTTTAAAGCAACTGAATATTTATATAATAGTTACAGAAATTTTATACTTTTTACCATTCTTTTTACTTCTGATTTTGCAAGGTGGATTCCTATTCGTTAGAAGGTTTACTTGTCTGCCATTGTCTTTTGATAATCCTTTCTTCATCTTTCTGTAGAAGTTAGGGATCTTTTTCATGTCTTCTTACGAGGATGTCCATAGTCATATAGATTGTTATTGATAGTACAAAGCCTCGTGGAGCTAGGTACACAACACGAACCTGTCATGGACTTCATTGAAGCAATGGATTGTTTGTTTGGAAAAATTAAAACCTTCCTCAATGAAAACAAATTAAAAACATGTTGAGTTGCACACTCAGACATGGAAAGAAACGGGCACACACAAAATAAGGGTAAAAATGTCAGCCGCTTGAAACAAATGTGTTTAACGAAGAATTCATGTATGGGATTGCATGGCTTCTTTCTAATTGTTAACATTAGAGTTTATGAAGGTGTTTGACTTTTGTTTTGTTTTTTTTGTTTTTTTGATAAGAAACTTGTGTACATTAACAAAAAAGAGGAAGACAGTCTAAGGGCTGGGGGGAAGAGCCCCCACCCATCAAAACTAAAAAAGGTGTTTGACTTTTTGTTGATGGAAGACAAAAGATCATTTGAATAAATCTCTAGATTCTTTGTTGGCTTTAAGTATTGCTAATAAATAGCAACAAGTATACTTCCTTCCGTTGCTTTTGCTTAAATATTCTCTCTTGGTGGTTATCAGGTAAAGAAACAAAATTATAGCTCATAGATAAAATCCCAATCAATCTGTACTTTTCATTATTTTGGAAGTGCCTTCACTTCCGTGTTCGATGACACATAGGTATTCCTGGATCTGCACATTTTCTATGGTATTGTAAGTCTTAGTTCACTGTTTATGGTCAAATTAAATTAGAATTTCTTTCACTTTCTAGTCACAATTAGTTACTTGTAACATGGGATTTCTTTGCTCGCTATATTAGACATGCCTGGGATTTTAACACTCGCTTGATTCTTCTGATGTTTGTTGTGTTCATCCTATGGGTTTTTGGGTTGAATTTTTTATTCAATGAGATGGGATACTTTTTTGTGATTGGAATCATCCTTCATATCATAGTTAGTGAAAACAATGTTCCTATTGCTCGCCTTCCACTGAATTTGTTTTGTGTTTTATCCTTCCTTAAAACTTGATCAACATTTCTGAAATCCCCTGCAGATATACAATTACCAGGGTGTCTTTAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGGTAAATCTTGCGAAGGATGTCTTGATGATTGTGATATTTTATGGAAAGGATGAAGGTTTGGTTTTTTATTATCATTGGAGAAAAGATCCTAAAAGAAAGGTTTAAATTCAATTTCGGGTTTTTAATTTTCATATCTAAATATTTTGGCTTGGTCCCTAAGTTTTCATAAATTTGTTTTGGTCGGTCTAGTTAAGATTTCTTAAGTCACCCTTTTTAAAACTTGATAACAGACATCATAACTTGCTGGGATAAAAAATTAGCAGAACAAGGGTGAAAACTATGGATCCTAAGAGGATTTAAAGTCGAAAACAAAAATTCTCTCTAATGTTAATAATATGTTGCCTGTTGTTTCTTCTTGACAGACCCACCAGCTGGCACTCCTGCTGTTGTCACTCAGGATGATGTTGGTGAGGAGGAGGAGGATAGTGAGCCTTCATTGAACGAAGATGACGACGACGACGATTTGGATGATGTGGATCAGGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGATAAGGTACTTCTTTACTCCTGGTTGGTAGCTGCTGGGTGCAGCATATGCTTGAGCATCTTGAGCTTCCAGCATGCCATTAAATATTTGTTTTTATGTTCTCAGCATATAGTGTACCTAATACTTACAATATGATAATTTTCATGTAATAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACGCTAAAGGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGTAAATCTACCCCCAGAACTTCTAGTTAGATATTAATCGACTTCGGTTTTCATGGAAGCTTGTTTCTTTGGCAGGCAACTGGGGAGTTCGACTTCTGATTTTTAATGGAGGCATCTTCATCGGCAGGCGGTTACCGGTAGCAGCGTTTTGAAAGAATTCCAGGAAGTTCGTTCATTGGGTGTTTAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCACGAGGGAAAAGGACATGTTGATTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGAATGAGAGCTCTTTCGGCCTTCAATGCATGGCAACTTGAGGATTTTCGAGAAAATTTATCATTGCTCTAATGGAATATATTTGTAACTTCAACCTCCGTATATTTTGGCCTCTTTTTTCCCCTTCTAATAATGAATCATTGCATTGCTATTCAATTTTTCACTGCTGTAGTCCTTCACTCTATTCCTC

mRNA sequence

ATGGCGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGCGACGAGTTCATTGATAATGGTCCTGGAGAGGACGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCCGTGAGCGGTCCCATAGAGAGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCGATAACTCCGGTTCACGATCTCAATGTTCCATATGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGATTTACTCTTTCCGCCGACGCCATTACAAACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCAACTGGACCCAGTGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGCGCTAATAATGTTGAGGTCAGATCTGGAAGGCCAAACCCGTATATGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTATGTGGAGGGGCGTGATGAAGCAGACAGGGGAGCGGCTCACCCATCCCATACACAGGACTTTTTCTTGATGAACTCTGGGAAGCGAAAGCGTGACGATTTTGCTTCCCAGTACCAGACTAGTGGTTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAATAGTATCTTTGAGATTGAGGTCTTGTTTTCTTACCTACTTGTCTGTACCCTAGGAGATTCTTTTCAACCTTGGACTTGA

Coding sequence (CDS)

ATGGCGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGCGACGAGTTCATTGATAATGGTCCTGGAGAGGACGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCCGTGAGCGGTCCCATAGAGAGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCGATAACTCCGGTTCACGATCTCAATGTTCCATATGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGATTTACTCTTTCCGCCGACGCCATTACAAACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCAACTGGACCCAGTGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGCGCTAATAATGTTGAGGTCAGATCTGGAAGGCCAAACCCGTATATGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTATGTGGAGGGGCGTGATGAAGCAGACAGGGGAGCGGCTCACCCATCCCATACACAGGACTTTTTCTTGATGAACTCTGGGAAGCGAAAGCGTGACGATTTTGCTTCCCAGTACCAGACTAGTGGTTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAATAGTATCTTTGAGATTGAGGTCTTGTTTTCTTACCTACTTGTCTGTACCCTAGGAGATTCTTTTCAACCTTGGACTTGA

Protein sequence

MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEVLFSYLLVCTLGDSFQPWT

Homology

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BLAST of Spg000916 vs. NCBI nr
Match: XP_022148420.1 (transcription initiation factor IIA subunit 1-like [Momordica charantia])

HSP 1 Score: 461.1 bits (1185), Expect = 6.3e-126
Identity = 226/236 (95.76%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRD 180
           GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNP+MQPPSWMGQRTPVDVNIAYVEGRD
Sbjct: 121 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPFMQPPSWMGQRTPVDVNIAYVEGRD 180

Query: 181 EADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           EADRGA+H S TQDFF+MNSGKRKR+DFASQYQ +GFIPQQDGAGDAANS+FEIE+
Sbjct: 181 EADRGASHQSLTQDFFMMNSGKRKREDFASQYQNNGFIPQQDGAGDAANSVFEIEI 236

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BLAST of Spg000916 vs. NCBI nr
Match: KAG7035387.1 (toa1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454.5 bits (1168), Expect = 5.9e-124
Identity = 222/241 (92.12%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           M TSTSSIYINVIEDVINKLR+EF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 1   MTTSTSSIYINVIEDVINKLRNEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
            KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN MYN+PT
Sbjct: 61  PKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNGMYNIPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRD 180
           GPSDHSASGTDASPAATTPGGSANNV+VRSGRP P+MQPPSWMGQRTPVDVNIAYVEGR+
Sbjct: 121 GPSDHSASGTDASPAATTPGGSANNVDVRSGRPTPFMQPPSWMGQRTPVDVNIAYVEGRE 180

Query: 181 EADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEVLFSY 240
           E DRGAAHPS TQDFF MN+GKRKRDDFASQYQTSGFIPQQDGA DA NS+FEIEVLF Y
Sbjct: 181 ETDRGAAHPSLTQDFFTMNAGKRKRDDFASQYQTSGFIPQQDGAVDADNSVFEIEVLFPY 240

Query: 241 L 242
           L
Sbjct: 241 L 241

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BLAST of Spg000916 vs. NCBI nr
Match: XP_008464085.1 (PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-122
Identity = 224/239 (93.72%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEADRGA--AHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           +EADRGA  AHPS TQDFF+MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIE+
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 239

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BLAST of Spg000916 vs. NCBI nr
Match: XP_022946939.1 (transcription initiation factor IIA subunit 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 448.4 bits (1152), Expect = 4.2e-122
Identity = 218/236 (92.37%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           M TSTSSIYINVIEDVINKLR+EF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 1   MTTSTSSIYINVIEDVINKLRNEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN MYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNGMYNIPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRD 180
           GPSDHSASGTDASPAATTPGGSANNV+VRSGRP P+MQPPSWMGQRTPVDVNIAYVEGR+
Sbjct: 121 GPSDHSASGTDASPAATTPGGSANNVDVRSGRPTPFMQPPSWMGQRTPVDVNIAYVEGRE 180

Query: 181 EADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           E DRGAAHPS TQDFF MN+GKRKRDDFASQYQTSGFIPQQDGA DA NS+FEIE+
Sbjct: 181 ETDRGAAHPSLTQDFFTMNAGKRKRDDFASQYQTSGFIPQQDGAVDADNSVFEIEI 236

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BLAST of Spg000916 vs. NCBI nr
Match: XP_038901376.1 (transcription initiation factor IIA subunit 1-like [Benincasa hispida])

HSP 1 Score: 448.0 bits (1151), Expect = 5.5e-122
Identity = 222/239 (92.89%), Postives = 230/239 (96.23%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           MATSTSSIYINVIEDVINKLR+EF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLREEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSTNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEADRGA--AHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           DE DRGA  AHPS TQDFF+MNSGKRKRDDFASQYQ +GFIPQQDGAGDA NS+FEIE+
Sbjct: 181 DEPDRGATGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAVNSVFEIEI 239

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BLAST of Spg000916 vs. ExPASy Swiss-Prot
Match: O08949 (Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=Gtf2a1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.8e-05
Identity = 43/140 (30.71%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNAS 132

Query: 128 TGPSDHSASGTDASPAATTP 140
           +  S  + + T A PA  TP
Sbjct: 133 SITSAAATAATLALPAGVTP 152

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BLAST of Spg000916 vs. ExPASy Swiss-Prot
Match: P52655 (Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 43/140 (30.71%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNA- 132

Query: 128 TGPSDHSASGTDASPAATTP 140
           +  S  + + T A PA  TP
Sbjct: 133 SNMSAAATAATLALPAGVTP 151

[Close]

BLAST of Spg000916 vs. ExPASy Swiss-Prot
Match: Q99PM3 (Transcription initiation factor IIA subunit 1 OS=Mus musculus OX=10090 GN=Gtf2a1 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG----------PIER 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G           +++
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  SAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN 127
               +          H    P + T   +  T  +L P +   T  Q  +P +      N
Sbjct: 73  QHQPQQQQHHHHHHQHQQAQPQQ-TVPQQAQTQQVLIPASQQATAPQVIVPDSKLLQHMN 132

Query: 128 VPTGPSDHSASGTDASPAATTP 140
             +  S  + + T A PA  TP
Sbjct: 133 ASSITSAAATAATLALPAGVTP 153

[Close]

BLAST of Spg000916 vs. ExPASy Swiss-Prot
Match: Q5RCU0 (Transcription initiation factor IIA subunit 1 OS=Pongo abelii OX=9601 GN=GTF2A1 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 43/140 (30.71%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNA- 132

Query: 128 TGPSDHSASGTDASPAATTP 140
           +  S  + + T A PA  TP
Sbjct: 133 SNMSAAATAATLALPAGVTP 151

[Close]

BLAST of Spg000916 vs. ExPASy Swiss-Prot
Match: Q9UNN4 (TFIIA-alpha and beta-like factor OS=Homo sapiens OX=9606 GN=GTF2A1L PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.3e-04
Identity = 37/130 (28.46%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGG 67
           +Y +VIEDVI  +R+ F + G  E VLK+L+ +WE K++Q+ A       S  S      
Sbjct: 10  LYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNSIQS------ 69

Query: 68  PITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAM--------YNVP 127
              P+  L +P+   +  ++ TA L+ P         T   GT++++          +VP
Sbjct: 70  ---PLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP 129

Query: 128 TGPSDHSASG 130
            G +  + SG
Sbjct: 130 AGVTLQTVSG 130

[Close]

BLAST of Spg000916 vs. ExPASy TrEMBL
Match: A0A6J1D2V5 (transcription initiation factor IIA subunit 1-like OS=Momordica charantia OX=3673 GN=LOC111017070 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.1e-126
Identity = 226/236 (95.76%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRD 180
           GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNP+MQPPSWMGQRTPVDVNIAYVEGRD
Sbjct: 121 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPFMQPPSWMGQRTPVDVNIAYVEGRD 180

Query: 181 EADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           EADRGA+H S TQDFF+MNSGKRKR+DFASQYQ +GFIPQQDGAGDAANS+FEIE+
Sbjct: 181 EADRGASHQSLTQDFFMMNSGKRKREDFASQYQNNGFIPQQDGAGDAANSVFEIEI 236

[Close]

BLAST of Spg000916 vs. ExPASy TrEMBL
Match: A0A1S3CM61 (transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC103502057 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.2e-123
Identity = 224/239 (93.72%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEADRGA--AHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           +EADRGA  AHPS TQDFF+MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIE+
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 239

[Close]

BLAST of Spg000916 vs. ExPASy TrEMBL
Match: A0A6J1G5C0 (transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450969 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122
Identity = 218/236 (92.37%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           M TSTSSIYINVIEDVINKLR+EF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 1   MTTSTSSIYINVIEDVINKLRNEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN MYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNGMYNIPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRD 180
           GPSDHSASGTDASPAATTPGGSANNV+VRSGRP P+MQPPSWMGQRTPVDVNIAYVEGR+
Sbjct: 121 GPSDHSASGTDASPAATTPGGSANNVDVRSGRPTPFMQPPSWMGQRTPVDVNIAYVEGRE 180

Query: 181 EADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           E DRGAAHPS TQDFF MN+GKRKRDDFASQYQTSGFIPQQDGA DA NS+FEIE+
Sbjct: 181 ETDRGAAHPSLTQDFFTMNAGKRKRDDFASQYQTSGFIPQQDGAVDADNSVFEIEI 236

[Close]

BLAST of Spg000916 vs. ExPASy TrEMBL
Match: A0A0A0KE66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.6e-122
Identity = 225/240 (93.75%), Postives = 232/240 (96.67%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 135 MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 194

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 195 SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 254

Query: 121 GPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 255 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 314

Query: 181 DE-ADRGA--AHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           +E ADRGA  AHPS TQDFF+MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIE+
Sbjct: 315 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 374

[Close]

BLAST of Spg000916 vs. ExPASy TrEMBL
Match: A0A5D3CVW1 (Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00280 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.0e-122
Identity = 223/239 (93.31%), Postives = 230/239 (96.23%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGS  NNV VRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVVVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 DEADRGA--AHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEV 237
           +EADRGA  AHPS TQDFF+MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIE+
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 239

[Close]

BLAST of Spg000916 vs. TAIR 10
Match: AT1G07480.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 282.0 bits (720), Expect = 4.9e-76
Identity = 145/228 (63.60%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EFI+N GPGE VL ELQG+WE KMMQAG ++GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGR 182
           G SD+   GT+          +  N++V++ RP+PYM PPS W   R  +DVN+AYV+GR
Sbjct: 125 GSSDYPTPGTE----------NGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDGR 184

Query: 183 DEADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDA 228
           DE +RG ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA
Sbjct: 185 DEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDA 217

[Close]

BLAST of Spg000916 vs. TAIR 10
Match: AT1G07480.2 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 282.0 bits (720), Expect = 4.9e-76
Identity = 145/228 (63.60%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EFI+N GPGE VL ELQG+WE KMMQAG ++GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGR 182
           G SD+   GT+          +  N++V++ RP+PYM PPS W   R  +DVN+AYV+GR
Sbjct: 125 GSSDYPTPGTE----------NGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDGR 184

Query: 183 DEADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDA 228
           DE +RG ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA
Sbjct: 185 DEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDA 217

[Close]

BLAST of Spg000916 vs. TAIR 10
Match: AT1G07470.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 280.0 bits (715), Expect = 1.9e-75
Identity = 144/228 (63.16%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EFI+N GPGE VL ELQG+WE KMMQAG ++GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGR 182
           G SD+   GT+          +  N++V++ RP+PYM PPS W   R  +DVN+AYV+GR
Sbjct: 125 GSSDYPTPGTE----------NGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDGR 184

Query: 183 DEADRGAAHPSHTQDFFLMNSGKRKRDDFASQYQTSGFIPQQDGAGDA 228
           DE +RG ++   TQD F+ +SGKRKRDD ++ YQ  G IPQQDGA DA
Sbjct: 185 DEPERGNSNQQFTQDLFVPSSGKRKRDDSSAHYQNGGSIPQQDGASDA 217

[Close]

BLAST of Spg000916 vs. TAIR 10
Match: AT5G59230.1 (transcription factor-related )

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09
Identity = 45/107 (42.06%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFIDNGP-GEDVLKELQGMWEAKMMQAGAVSGPIERSAPS 62
           + TSS Y  VI+DVINK R + + NG   E VL ++Q MW+ KM+QAGA+SG IE S+ S
Sbjct: 6   SDTSSSYNYVIDDVINKSRCDLVYNGELDESVLSQIQSMWKTKMIQAGAMSGTIETSSAS 65

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLP 109
            PT     TPV                        T LQTP   PLP
Sbjct: 66  IPT-----TPV---------------------IVQTTLQTPDAIPLP 86

The following BLAST results are available for this feature:

BLAST of Spg000916 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148420.1	6.3e-126	95.76	transcription initiation factor IIA subunit 1-like [Momordica charantia]	[more]
KAG7035387.1	5.9e-124	92.12	toa1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008464085.1	1.9e-122	93.72	PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo]	[more]
XP_022946939.1	4.2e-122	92.37	transcription initiation factor IIA subunit 1-like isoform X1 [Cucurbita moschat...	[more]
XP_038901376.1	5.5e-122	92.89	transcription initiation factor IIA subunit 1-like [Benincasa hispida]	[more]

BLAST of Spg000916 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O08949	9.8e-05	30.71	Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=G...	[more]
P52655	4.9e-04	30.71	Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 ...	[more]
Q99PM3	4.9e-04	30.28	Transcription initiation factor IIA subunit 1 OS=Mus musculus OX=10090 GN=Gtf2a1...	[more]
Q5RCU0	4.9e-04	30.71	Transcription initiation factor IIA subunit 1 OS=Pongo abelii OX=9601 GN=GTF2A1 ...	[more]
Q9UNN4	8.3e-04	28.46	TFIIA-alpha and beta-like factor OS=Homo sapiens OX=9606 GN=GTF2A1L PE=1 SV=2	[more]

BLAST of Spg000916 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2V5	3.1e-126	95.76	transcription initiation factor IIA subunit 1-like OS=Momordica charantia OX=367...	[more]
A0A1S3CM61	9.2e-123	93.72	transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1G5C0	2.1e-122	92.37	transcription initiation factor IIA subunit 1-like isoform X1 OS=Cucurbita mosch...	[more]
A0A0A0KE66	4.6e-122	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1	[more]
A0A5D3CVW1	6.0e-122	93.31	Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Spg000916 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07480.1	4.9e-76	63.60	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07480.2	4.9e-76	63.60	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07470.1	1.9e-75	63.16	Transcription factor IIA, alpha/beta subunit	[more]
AT5G59230.1	2.3e-09	42.06	transcription factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004855	Transcription factor IIA, alpha/beta subunit	SMART	SM01371	TFIIA_2	coord: 7..253 e-value: 1.2E-9 score: 33.5
IPR004855	Transcription factor IIA, alpha/beta subunit	PFAM	PF03153	TFIIA	coord: 8..206 e-value: 1.7E-16 score: 61.2
IPR004855	Transcription factor IIA, alpha/beta subunit	PANTHER	PTHR12694	TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1	coord: 2..228
None	No IPR available	GENE3D	1.10.287.100		coord: 1..53 e-value: 1.7E-20 score: 74.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..72
None	No IPR available	PANTHER	PTHR12694:SF16	BNAC08G45360D PROTEIN	coord: 2..228
None	No IPR available	CDD	cd07976	TFIIA_alpha_beta_like	coord: 5..62 e-value: 2.27331E-18 score: 76.0239
None	No IPR available	SUPERFAMILY	47396	Transcription factor IIA (TFIIA), alpha-helical domain	coord: 4..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000916.1	Spg000916.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005672	transcription factor TFIIA complex
molecular_function	GO:0003743	translation initiation factor activity