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Spg000807 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCACTGTAACCAGTCTTGAAGATCCAACAACTGGTGAGGAAGAGAAAATTTCGTCACAGAAGCAAAGTGGAAGTGCAGAACAGCCACTAAAAGATGAGATCAAGGCAGAAGAATTTGGAAAAGTAGAAGCCATCATCCATGACCATGCTAAGACTTATCCTGGCAAAGTGATTGAAAGTCCAACTCCAGCAGAGACTGGGAAGAAGAGGAAAAGGAACTCTTCAATCAAGGAGAAACTGGATTTAGTTAATGATGCAAATTATGAAGGTACCCAAGCAAGCAATGTCCAAGTCAAGTCTAATGGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCACGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGATAG ATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCACTGTAACCAGTCTTGAAGATCCAACAACTGGTGAGGAAGAGAAAATTTCGTCACAGAAGCAAAGTGGAAGTGCAGAACAGCCACTAAAAGATGAGATCAAGGCAGAAGAATTTGGAAAAGTAGAAGCCATCATCCATGACCATGCTAAGACTTATCCTGGCAAAGTGATTGAAAGTCCAACTCCAGCAGAGACTGGGAAGAAGAGGAAAAGGAACTCTTCAATCAAGGAGAAACTGGATTTAGTTAATGATGCAAATTATGAAGGTACCCAAGCAAGCAATGTCCAAGTCAAGTCTAATGGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCACGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGATAG ATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCACTGTAACCAGTCTTGAAGATCCAACAACTGGTGAGGAAGAGAAAATTTCGTCACAGAAGCAAAGTGGAAGTGCAGAACAGCCACTAAAAGATGAGATCAAGGCAGAAGAATTTGGAAAAGTAGAAGCCATCATCCATGACCATGCTAAGACTTATCCTGGCAAAGTGATTGAAAGTCCAACTCCAGCAGAGACTGGGAAGAAGAGGAAAAGGAACTCTTCAATCAAGGAGAAACTGGATTTAGTTAATGATGCAAATTATGAAGGTACCCAAGCAAGCAATGTCCAAGTCAAGTCTAATGGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCACGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGATAG MGRGRGKGKKFTVTSLEDPTTGEEEKISSQKQSGSAEQPLKDEIKAEEFGKVEAIIHDHAKTYPGKVIESPTPAETGKKRKRNSSIKEKLDLVNDANYEGTQASNVQVKSNGFRHNGSRRKSKPRRAAEAVVECR Homology
BLAST of Spg000807 vs. NCBI nr
Match: XP_022148746.1 (uncharacterized protein LOC111017338 [Momordica charantia]) HSP 1 Score: 213.0 bits (541), Expect = 1.6e-51 Identity = 115/135 (85.19%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Spg000807 vs. NCBI nr
Match: XP_022995170.1 (uncharacterized protein LOC111490789 [Cucurbita maxima] >XP_022995171.1 uncharacterized protein LOC111490789 [Cucurbita maxima]) HSP 1 Score: 198.7 bits (504), Expect = 3.1e-47 Identity = 108/135 (80.00%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of Spg000807 vs. NCBI nr
Match: KAG7035836.1 (hypothetical protein SDJN02_02635, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45 Identity = 107/135 (79.26%), Postives = 117/135 (86.67%), Query Frame = 0
BLAST of Spg000807 vs. NCBI nr
Match: XP_022958162.1 (uncharacterized protein LOC111459471 [Cucurbita moschata] >KAG6605893.1 hypothetical protein SDJN03_03210, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45 Identity = 107/135 (79.26%), Postives = 117/135 (86.67%), Query Frame = 0
BLAST of Spg000807 vs. NCBI nr
Match: XP_023532419.1 (uncharacterized protein LOC111794599 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.4 bits (485), Expect = 5.0e-45 Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of Spg000807 vs. ExPASy TrEMBL
Match: A0A6J1D6B7 (uncharacterized protein LOC111017338 OS=Momordica charantia OX=3673 GN=LOC111017338 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 7.7e-52 Identity = 115/135 (85.19%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Spg000807 vs. ExPASy TrEMBL
Match: A0A6J1K191 (uncharacterized protein LOC111490789 OS=Cucurbita maxima OX=3661 GN=LOC111490789 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.5e-47 Identity = 108/135 (80.00%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of Spg000807 vs. ExPASy TrEMBL
Match: A0A6J1H145 (uncharacterized protein LOC111459471 OS=Cucurbita moschata OX=3662 GN=LOC111459471 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46 Identity = 107/135 (79.26%), Postives = 117/135 (86.67%), Query Frame = 0
BLAST of Spg000807 vs. ExPASy TrEMBL
Match: A0A2P6QM36 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0077891 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.2e-30 Identity = 84/137 (61.31%), Postives = 101/137 (73.72%), Query Frame = 0
BLAST of Spg000807 vs. ExPASy TrEMBL
Match: A0A7N2QX30 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.2e-30 Identity = 83/137 (60.58%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of Spg000807 vs. TAIR 10
Match: AT2G42190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57930.2); Has 1381 Blast hits to 1230 proteins in 175 species: Archae - 3; Bacteria - 25; Metazoa - 672; Fungi - 135; Plants - 127; Viruses - 30; Other Eukaryotes - 389 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 0
BLAST of Spg000807 vs. TAIR 10
Match: AT3G57930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 61/139 (43.88%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Spg000807 vs. TAIR 10
Match: AT3G57930.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 61/139 (43.88%), Postives = 82/139 (58.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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