Spg000584 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000584
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Small ubiquitin-related modifier
Location	scaffold8: 42500869 .. 42503373 (-)
RNA-Seq Expression	Spg000584
Synteny	Spg000584

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGCGGAAATCAGAAGATTTGAACCCTAATTTCTGGTAATATCGGCGAAGATTGAAGAATGTCGGGTGTCACGAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGTTGGTTTCTTTCGAGATTTCTTTTAGTCTGGTGGTCTTTTTATGGTGATTTTTGAGAAATTAAGTTCATGCTCAAAGGCTTTAATTTGATGTTTCTTTCATGTGTTTTTTGGTTGTTTGACGTTAGGTTGCCTTAATGTTCTCGTTTTCTTTTGTTTCTTCTTCTTCTTTTAATTTCTTTCTCCTAGCCGCTAGGGCTTGTAGGGTTTTATTGATCACTATAATTCATTCTATGTTCTCTATTATTGCATCGCCTTTTGGTTGTTCGAAAAAATTGAAGCCGGAAAATGGGAAAAAATAAGTTTATCGTTTTAAATTTGCAACGTGGCAGGTGCAGTAGTTGTATTTTGTTCCTTTTTCTTTAGGAAAAAAACTGTGTCAGAATCTAGCAAAGCCGATTAAGTGATAAGTGGAATTCTAGTTTCTATTGTTGGATTAGTATTTGCAGTTCTGTTGCCATTCAGCCTGTTCCATTTTCCTGTTTGTTTGTTATACTCACTCTGGGAAGCAAAATCCCTGTTGTAGCTTCGATTGGTCTTTTGTCAAGATGGCGAAGCCTGCCATTCCGTTGAATCCGTTCTCACATAAATTATCTGGGAGACTGGGACTGAATTTGAGATGGAGGACGGGACTGAGTCCTTTGGTATCCTTCTAGTTTACTTTTCGTTTGGATAGATTTATCTCTTGTGGATCGAATACCTGCTGGGCTGTAGCATTCTTTTGTTCATTTTGTTGGAATACATTAAGAAATGACCCTTTTTTCTTATATTACAGCGAATGGAGTGGGTTTGATATATTTTAAAGATTCAATTAAATGTAATATAAACCAAGGCTTAGTAAATAGAATAGAGTGGTTTATTGTAAGCTCCAATGTCTTGGGGTTCCTCACAATTCTTTCACCATTTCAATGAAAGGTTCAGTTGCGCCATTATAAGAATAGTAATACAAGTCTACAAACGTACCTAAGCACTAGAACTGTAGAAGTAAGACAGTTTCATCCATCTTCTTAATACATGCCATGGAATATTACACGTGGTTTTGTTTTGATTTCTCTCTTTTGTTTACCTTGGAAACATGGTGCTTTGGAGAACGTGTTTAATCTATCTATTGCGTTATTTGTTACTAAAGAAGGGGGAGCAAGGAGATGAAGTGTTTGTGAATGCTTAGCTAGCTCCATTATTCCTGGATTAATTGTCTCATGGAAAATTTCCAGGGACTGAGTCCAACTTGTCTTTTTCATGCTGTCTGTTCTCTCTATCTTCCTCTGACATATGTCTCAGATTCCTTTATCTTTGTTTCACTTTATCTGTTCCCGTTTCCTTTCTCCCTCATTCTTCTTTAACAAGTTCTTTCTGCAATGCTCGTACACCTTTTTCTTCCTTTTTTGCTTTTCATTTCTAGTTGTAAACTATACCATTTTTTTTTAAGAGTTAACTATACCAATTAGTTCTTGTCAATTTTGGTTTGAAATATTGTGTTGGGAGGATTATAAAATTTTTCTTGATCTTCATGAGTTTGTATTTATGAAAGACATGATAACCTCATAGTTATCACCTTTTGATTTACAATAGGATGGGAATGAAGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGCGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTGTTTGATGGTCGTCGTCTTCGTGCAGAGCAAACTCCTGATGAGGTATAATTTTCTCTGATTTCAGCATGAATAGATATCCTATATTAAATTCATGTATTTTTTTTAATAAAAGCATGTGTTATTCCAGCTAGAGATGGAGGACGGGGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGAAACACGTGCTGCTGGTTCTGATCCTTTAGGAACTAGTATTTTCGTTGAATTGGAAAATATGTTCAGTTAGATTCTTGCAGGTTTATTAGGTTTGTAGATTTGCAAAAGACGTTCCCAAAGTAATCATCCAAATTGTGAAATCTTCCTTTGACTGGTTAAAGGGAGAAGATCTAGTTTAAGCTTTATTTGAGGTCATATTATCTTCTCATATCAAATATTACTTGGTTCGCTGTATGGATTGAAAGGCCTCGCCAGGGAAGCAATAGTATATCATGGTTGGATAGTTAATTAGAATAGTGTGGTTTCCTTTTTCACATTGTGAGCTTTCTGAAAACGAAATGAGACGACTTTAAATCTATATTTGGTATATATTTATTTTTCAAATTTATAGAGGTAACACTAAGTTGATTAGGAAGGTTAAATGATTTGGAATCATCAGTGGCATATTATGTTTTTCCAAGTTTATAGAGGTAACACAATATTAACT

mRNA sequence

ATGTCGGGTGTCACGAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGTTCTGTTGCCATTCAGCCTGTTCCATTTTCCTGTTTGTTTGTTATACTCACTCTGGGAAGCAAAATCCCTGTTGTAGCTTCGATTGGTCTTTTGTCAAGATGGCGAAGCCTGCCATTCCGTTGAATCCGTTCTCACATAAATTATCTGGGAGACTGGGACTGAATTTGAGATGGAGGACGGGACTGAGTCCTTTGGATGGGAATGAAGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGCGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTGTTTGATGGTCGTCGTCTTCGTGCAGAGCAAACTCCTGATGAGCTAGAGATGGAGGACGGGGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGA

Coding sequence (CDS)

ATGTCGGGTGTCACGAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGTTCTGTTGCCATTCAGCCTGTTCCATTTTCCTGTTTGTTTGTTATACTCACTCTGGGAAGCAAAATCCCTGTTGTAGCTTCGATTGGTCTTTTGTCAAGATGGCGAAGCCTGCCATTCCGTTGAATCCGTTCTCACATAAATTATCTGGGAGACTGGGACTGAATTTGAGATGGAGGACGGGACTGAGTCCTTTGGATGGGAATGAAGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGCGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTGTTTGATGGTCGTCGTCTTCGTGCAGAGCAAACTCCTGATGAGCTAGAGATGGAGGACGGGGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCATTGA

Protein sequence

MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSFVKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTH

Homology

[Close]

BLAST of Spg000584 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-39
Identity = 99/164 (60.37%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of Spg000584 vs. NCBI nr
Match: KAG6570548.1 (Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-38
Identity = 98/164 (59.76%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 243 MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 302

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 303 ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 341

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 363 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 341

[Close]

BLAST of Spg000584 vs. NCBI nr
Match: KAF9669561.1 (hypothetical protein SADUNF_Sadunf14G0120400 [Salix dunnii])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-38
Identity = 106/176 (60.23%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFC-CHSACSIFLFVCYTHSGKQNPCCSFDWS 60
           MSGVT   QEEDKKPNDQSAHINLKVKGQ     SA  +F   C+        C  F + 
Sbjct: 1   MSGVTGQPQEEDKKPNDQSAHINLKVKGQVLGFSSALRLFEAECFVWGF----CYLFIYL 60

Query: 61  FVKMAKPAIPLNPF-SHKLSG--RLG---------LNLRWRTGLSPLDGNEVFFRIKRST 120
           F+ +        PF + KL    RLG         LN +++      DGNEVFFRIKRST
Sbjct: 61  FI-VLDCLFVFRPFATAKLIWVYRLGNFVAEPFKMLNYKFQ------DGNEVFFRIKRST 120

Query: 121 QLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 164
           QLKKLMNAYCDRQSV+ NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGG+
Sbjct: 121 QLKKLMNAYCDRQSVEFNSIAFLFDGRRLRGEQTPDELDMEDGDEIDAMLHQTGGA 165

[Close]

BLAST of Spg000584 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-38
Identity = 98/164 (59.76%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Spg000584 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-38
Identity = 98/164 (59.76%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Spg000584 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-34
Identity = 85/158 (53.80%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 6   NTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSFVKMAK 65
           +  QEEDKKP D  AHINLKVKGQ                                    
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQ------------------------------------ 61

Query: 66  PAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 125
                                        DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N
Sbjct: 62  -----------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMN 94

Query: 126 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 164
           SIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 122 SIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of Spg000584 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.4e-33
Identity = 85/153 (55.56%), Postives = 85/153 (55.56%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSFVKMAKPAIP 69
           EEDKKP DQ AHINLKVKGQ                                        
Sbjct: 6   EEDKKP-DQGAHINLKVKGQ---------------------------------------- 65

Query: 70  LNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 129
                                    DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAF
Sbjct: 66  -------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAF 92

Query: 130 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 163
           LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 126 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]

BLAST of Spg000584 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-31
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 95  DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEID 154
           DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTPDELEMEDGDEID
Sbjct: 29  DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEID 88

Query: 155 AMLHQTGG 163
           AMLHQTGG
Sbjct: 89  AMLHQTGG 96

[Close]

BLAST of Spg000584 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 5.9e-19
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 95  DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEID 154
           D NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+
Sbjct: 44  DNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIE 103

Query: 155 AMLHQTGGSTH 166
           A+L Q GG TH
Sbjct: 104 AVLEQLGGCTH 114

[Close]

BLAST of Spg000584 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 95  DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEID 154
           DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD ID
Sbjct: 26  DGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNGARIGGLETPDELDMEDGDVID 85

Query: 155 AMLHQTGG 163
           A    +GG
Sbjct: 86  ACRAMSGG 93

[Close]

BLAST of Spg000584 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39
Identity = 99/164 (60.37%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of Spg000584 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.4e-39
Identity = 98/164 (59.76%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Spg000584 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.4e-39
Identity = 98/164 (59.76%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Spg000584 vs. ExPASy TrEMBL
Match: A0A6J1JFC9 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.4e-39
Identity = 98/164 (59.76%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Spg000584 vs. ExPASy TrEMBL
Match: A0A1S3C3V0 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.4e-39
Identity = 98/164 (59.76%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  VKMAKPAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQ 120
                                             DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 61  ----------------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 99

Query: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 165
           SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 SVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Spg000584 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-35
Identity = 85/158 (53.80%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 6   NTQQEEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSFVKMAK 65
           +  QEEDKKP D  AHINLKVKGQ                                    
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQ------------------------------------ 61

Query: 66  PAIPLNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 125
                                        DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N
Sbjct: 62  -----------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMN 94

Query: 126 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 164
           SIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 122 SIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of Spg000584 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 144.8 bits (364), Expect = 6.1e-35
Identity = 89/153 (58.17%), Postives = 90/153 (58.82%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSFVKMAKPAIP 69
           EEDKKP DQ AHINLKVKGQ           FV  T            W  +        
Sbjct: 6   EEDKKP-DQGAHINLKVKGQ---------AFFVVGT------------WLVI-------- 65

Query: 70  LNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 129
                                    DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAF
Sbjct: 66  -----------------------DTDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAF 105

Query: 130 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 163
           LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 126 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 105

[Close]

BLAST of Spg000584 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 141.4 bits (355), Expect = 6.7e-34
Identity = 85/153 (55.56%), Postives = 85/153 (55.56%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQFCCHSACSIFLFVCYTHSGKQNPCCSFDWSFVKMAKPAIP 69
           EEDKKP DQ AHINLKVKGQ                                        
Sbjct: 6   EEDKKP-DQGAHINLKVKGQ---------------------------------------- 65

Query: 70  LNPFSHKLSGRLGLNLRWRTGLSPLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 129
                                    DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAF
Sbjct: 66  -------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAF 92

Query: 130 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 163
           LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 126 LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]

BLAST of Spg000584 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 95  DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEID 154
           DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD ID
Sbjct: 26  DGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNGARIGGLETPDELDMEDGDVID 85

Query: 155 AMLHQTGG 163
           A    +GG
Sbjct: 86  ACRAMSGG 93

[Close]

BLAST of Spg000584 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14
Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 99  VFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLH 158
           V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP+EL +ED DEI+A   
Sbjct: 27  VYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPNELGLEDEDEIEAFGE 86

Query: 159 QTGG 163
           Q GG
Sbjct: 87  QLGG 90

The following BLAST results are available for this feature:

BLAST of Spg000584 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150752.1	3.8e-39	60.37	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu...	[more]
KAG6570548.1	1.1e-38	59.76	Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF9669561.1	1.1e-38	60.23	hypothetical protein SADUNF_Sadunf14G0120400 [Salix dunnii]	[more]
XP_008456407.1	1.1e-38	59.76	PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small...	[more]
XP_022943304.1	1.1e-38	59.76	small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub...	[more]

BLAST of Spg000584 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	3.8e-34	53.80	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	9.4e-33	55.56	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	1.8e-31	95.59	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	5.9e-19	59.15	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	1.5e-14	54.41	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of Spg000584 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV8	1.8e-39	60.37	Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3...	[more]
A0A6J1FTW7	5.4e-39	59.76	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P...	[more]
A0A5A7UHK7	5.4e-39	59.76	Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1JFC9	5.4e-39	59.76	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=...	[more]
A0A1S3C3V0	5.4e-39	59.76	Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV...	[more]

BLAST of Spg000584 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	2.7e-35	53.80	small ubiquitin-like modifier 1	[more]
AT5G55160.2	6.1e-35	58.17	small ubiquitin-like modifier 2	[more]
AT5G55160.1	6.7e-34	55.56	small ubiquitin-like modifier 2	[more]
AT5G55170.1	1.1e-15	54.41	small ubiquitin-like modifier 3	[more]
AT5G55856.1	3.5e-14	51.56	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 81..158 e-value: 1.8E-9 score: 47.5
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 81..162 score: 14.62139
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 94..157 e-value: 8.6E-21 score: 73.5
None	No IPR available	GENE3D	3.10.20.90		coord: 20..165 e-value: 4.0E-34 score: 118.6
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 94..163 coord: 5..30
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 94..163 coord: 5..30
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 95..158 e-value: 7.17693E-44 score: 137.745
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 94..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000584.1	Spg000584.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding