Spg000564 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000564
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CSL zinc finger domain-containing protein
Location	scaffold8: 36609933 .. 36613888 (-)
RNA-Seq Expression	Spg000564
Synteny	Spg000564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGAAGGCAGAACGGCCGCGATGAGGACGGTGGTGACAGTGGCTTTGGTTGCGATGGTGCTGGTTTCGGTTGCGGACGCGATCAATACGAACGATATATACAGTCCTTGTTTGGATGCGAAGATTCAGAAATCAGACGGATTTACTTTTGGCGTAGCGTTTTCGTCGAAGGAATCGTTCTTTCAGGATCAGATTCAATTTTCGCCTTGTGATAGTCGTCTCGCCTTGGCATCAAAAAACGCTCAACTCGCTGTTTTCAGGCCTATGGTCGACCAGCTCACTTTCCTCACCATTAATAGCAGCACTTTCAATCCGGTACGTCTGCGATTCATTTGCTCATGTTACAACAGAATGTTCGTCCAATACTGACTTCATTCATGAAAATTGATTTCGTTGCTTCCTCTGTTTTTTCCAATAACATGAACAAATAAATAGATAACAAATTAGATTTTGTAGGTGTTGAATAAGAAATTTCCATCAATCACAACTCGTCACTGTTATTAAATTTGAGATCAATTATAAATGGACATGTATGTCAAATTAAATTTGAAGACAAAAGATTTGTAAGGGTCTCAAACAATGTCATATGTCATTTGAGCCCTATCAAATTGAGTCATATTTCAATGAGACTCAAATTAAATAAGCTTAAGAACAATTTGGTCCCAAGAATACATAAAACCTTGGGAAAACTCTATAATAGAGCAACCACCTTTACACATTCAAGAAGAAGTAAGAGGCATACGGAGGAAGGTTGGAAGAGGGAATAAACCCTGAAAAGACTTTAAGGCTTGAAGAAATCGCTTAAATCTACTAGGTTGGAAGGCTAGAAGATTGAATAATCTCTAAGAAATTTTTAAGATGAAATAACTTAAATCTTCTAAGTATTAAGATTGAAGCTTTCAAACGACTTAGAAGACAGAAGTCTTTGAAGAATTTAGTGAAAAATACATTTCTGGTTCTTGAGGTTCGTGTTAGGTTTTTGGTCCTTAAATTTTCAAACTTAACAATTTAAGGTTTAGATTTTGTTTTATTTTGGTCCATTCATCCACTTTTACCTTAAATCTTAACGGTTTCGTAACGTGACACTATTTTATTTATTAATTTTTTTAAAAAAATTTAAAAATAAAACAATTAAAAAATATATATTTTTTAAATTTCATTTTCCCTCTCATTTTTCCCTCCCTTTCTTCTTCTTCCAACCACCATCATCATCTTCTTCTTCACAACCACCATCACCATCACCAAGGTCACTGTTGTGCGGCCACTAGCGATTGCCGTTCGTTGGTCGCCAGTCGTCTGGCGCCGGCGACAATTTTTTTGTTTTTTGTTTTTTGTTTTTTTTTTTATTGTTTGTTCTTCCTCCTTTCTTCTTCTTTCTCTCCCTTTTTTTTCCTAAGAAAAGAGGGAGAGAGAAAGAGTTTCTCCTCCCCGTTCAAATGGGTTCCTCCTCCCTTCCCCGTTTCAGATCTGTTTCTTTTGTTATTGTTGTTGTTGTTATTATTATTATTATTATTATTATTATTATTTCTCTCTATATATAAATTTAAAGTTTAAACATTATAGATAATTAGATAATTTGATATGAAATATTATTTTGTTTCTATCGGGAGATTTAAGAAATTTATCTTTAAATATATAATATTTTTAAAACTTAAGTATTTAAACGAAGATTTCATGTGAATAATTAACAATCTAATTGAAAATTAATGAATATTTCTCATGAAAAAATAATTATTTGAAAATATATCAAAAGAATTATTTGATTCATGAGATCAAAAAAGAAGAAAAGAAAAAAACTAAAAGAGGATAATTCCCTGTAGGGAATCTGATCCGTGTGAATTCCCCGCCGGGAATCCCCGTCTCATTCCCTACGAAATTTAACGGGAAATTTCGTAAGGATAGGGATTGAAATGGGAGGTGGGGACGATGGACGGGGATGTCATCTCCGTCCATGGCCCACCTCGTGGACATCTCTAGCTTCTAGAGAGATAAGAGAAGACACTTGAAGTTAAAGAAAACGTCAAAGCAAAGACCTTTAATAAGCTAAAAGCTAAAGACCTTCATTAACCTGAAAACCTTTAATAAGCTACCAGTCAAAGATCTTCAATAATCTAAAAGCTAAAGATCTTTAATAAGATAAAAATTGAAGATCTTCAATAAGCTAAAAGTCGAAGACTAAGAAGCTACTAGTCGAATACCTTTAACAAACTCGAAACTGAAGACTTTCCAAAGTTCAAAGTCAAAGATACAACCTCGAGAACAATCATTTTAGTCCTTGAATCAAGTATACATGAGAGAGAGAAAAATCAGAGAACCGTAGATTAGATTAGAAGATTGTACTTACTATACTGCATAAATTAATATAAATTCAAGTTTTATTCCACGAATTAAATTTCTTCGAAAACCTTGTATGCAATAGATGTGTGAATTTTTTTTTAAAAAAAAAACCGTCAAATAGGTCAAAAAACTATTAAACACAAAATTGAAAGTTTAGACCTAGTAGACATCAACTATAGAGAGGCATATGTGGTTCGGGTTTATTAGGGGAGGGGTGACACATACGATTCAACAGACAAGATATGATGGGGTGATTTTCTTCTTAAATATCTTTTTCCCCTAGAGAATTATTATTCAAATGGGAGATTGTGAATTCAAAAATCTTATTAAGTATCTTGACTAAAAGCTTTCTTTTTTCGTTAGTTTTTTTTCCTTTAATACAAACAGGGGAACAAGGATCTGAAACTTACTTTTAAAGAGGTCAGTTGGTACCTCGACAAATTAAACATAATTTTTCTAGTGGTAATTAATTGACTGGAATCCTTTGCCATTATTTATCACCTTTAATTAACTGCATATGATGTAGTGCAATAATAAGTCAGTCCATGATGGATAAAATGGATGACAACTCAGTCAACTAGAGTTCTTCCAATTAGAAACAAAATTCCAACCAACTTTAATTATCTTGCTATAAAATGTAACCTTTTTACATATCTAGTTAGCAGTTGGGAGCATTTGTAAAGCTGGCACAAATTAGGGAGAAAAAAAAATCCCAAAAATCTTACACACTAAAGAACAACGATTTTTTTCGTTGGTCAAACCGTGGGTGGGTCACTAACTTTTTGAATGTTGAAATAATGAATTCATGGAAGATTTTGGTAGATCGTTTTCCTGTGTGAGGTTATATTATTTTTAGGAAAAGTAACCTAAGCAAGAAATGTTTTAGGACAACTATTTCAAATTTAATTTAAATAACTATCTTTTTTGTCAAAATGAAAATGCCTACTTTCAAGAAACCTTACAGTTATGAACTTTCTTTTCCTACCAAATATAGGTTAATCCATGTCAATCAAACGAAATAAGCATCACAACTTTACATAATAATATTTTTTAATGTTTTTTTTTTTCTCTTTTTTGCAGGCTATGACTGGTGGGTATATGGTAGCATTTGCTGGGCAGAAGTATGCAGCAAGATCTCTCCCAGTAATGGTTACTGATAATTCTAACACCATAACCAGTTTCACTTTGGTAAGCCTACAAAGCATGCGCAAAGAAAAGGGAAAATCACCATCTTGATACTAACAAAAGTGTTGCTTGTGTCTATTGGTTTGCAGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCACAGGGGATTTTTCAGTTTGCCTGGACAACCAAGACTGTGCAGTTCCAAGCTCCAAATGTAAGTACAATGGTGGGTCAGTTGACTGCAATATTGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCAGGCGCTACTCGCTCTATCAACTCTTCTCCGATGTTCGTGATACGATCACCGAAGTTAGTGGTACGATCACCAATGTTACTGATACGATCACCAAACCATTCGGGTAA

mRNA sequence

ATGAGTGAAGGCAGAACGGCCGCGATGAGGACGGTGGTGACAGTGGCTTTGGTTGCGATGGTGCTGGTTTCGGTTGCGGACGCGATCAATACGAACGATATATACAGTCCTTGTTTGGATGCGAAGATTCAGAAATCAGACGGATTTACTTTTGGCGTAGCGTTTTCGTCGAAGGAATCGTTCTTTCAGGATCAGATTCAATTTTCGCCTTGTGATAGTCGTCTCGCCTTGGCATCAAAAAACGCTCAACTCGCTGTTTTCAGGCCTATGGTCGACCAGCTCACTTTCCTCACCATTAATAGCAGCACTTTCAATCCGGCTATGACTGGTGGGTATATGGTAGCATTTGCTGGGCAGAAGTATGCAGCAAGATCTCTCCCAGTAATGGTTACTGATAATTCTAACACCATAACCAGTTTCACTTTGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCACAGGGGATTTTTCAGTTTGCCTGGACAACCAAGACTGTGCAGTTCCAAGCTCCAAATGTAAGTACAATGGTGGGTCAGTTGACTGCAATATTGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCAGGCGCTACTCGCTCTATCAACTCTTCTCCGATGTTCGTGATACGATCACCGAAGTTAGTGGTACGATCACCAATGTTACTGATACGATCACCAAACCATTCGGGTAA

Coding sequence (CDS)

ATGAGTGAAGGCAGAACGGCCGCGATGAGGACGGTGGTGACAGTGGCTTTGGTTGCGATGGTGCTGGTTTCGGTTGCGGACGCGATCAATACGAACGATATATACAGTCCTTGTTTGGATGCGAAGATTCAGAAATCAGACGGATTTACTTTTGGCGTAGCGTTTTCGTCGAAGGAATCGTTCTTTCAGGATCAGATTCAATTTTCGCCTTGTGATAGTCGTCTCGCCTTGGCATCAAAAAACGCTCAACTCGCTGTTTTCAGGCCTATGGTCGACCAGCTCACTTTCCTCACCATTAATAGCAGCACTTTCAATCCGGCTATGACTGGTGGGTATATGGTAGCATTTGCTGGGCAGAAGTATGCAGCAAGATCTCTCCCAGTAATGGTTACTGATAATTCTAACACCATAACCAGTTTCACTTTGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCACAGGGGATTTTTCAGTTTGCCTGGACAACCAAGACTGTGCAGTTCCAAGCTCCAAATGTAAGTACAATGGTGGGTCAGTTGACTGCAATATTGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCAGGCGCTACTCGCTCTATCAACTCTTCTCCGATGTTCGTGATACGATCACCGAAGTTAGTGGTACGATCACCAATGTTACTGATACGATCACCAAACCATTCGGGTAA

Protein sequence

MSEGRTAAMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQIQFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARSLPVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVPSSKCKYNGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVSGTITNVTDTITKPFG

Homology

[Close]

BLAST of Spg000564 vs. NCBI nr
Match: XP_022148528.1 (uncharacterized protein LOC111017155 [Momordica charantia])

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-111
Identity = 202/249 (81.12%), Postives = 226/249 (90.76%), Query Frame = 0


Query: 7   AAMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQI 66
           AAMRT  T+AL AM+L+ VA+  +TND++SPCLDAK+Q+SDGFTFGVAFSSKESFFQDQI
Sbjct: 2   AAMRT-ATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 61

Query: 67  QFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARSL 126
           QFSPCD RL LASKNAQL VFRP VDQL+ LTINS+TFNPA+ GGYMVAFAGQKYAARSL
Sbjct: 62  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 121

Query: 127 PVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVPSSKCKY 186
           PV++TDNSNTITSFTLV EFQKGTLQNLFWKKFGCDKCTGD+SVCLDNQDCAVP++KCK+
Sbjct: 122 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 181

Query: 187 NGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVSGTITNV 246
           NGGS+DCN+ IQLAFSGTD+NLEVLNSWFEVDNLRRYSLY+LFSDVRDTI++V       
Sbjct: 182 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVH------ 241

Query: 247 TDTITKPFG 256
            DTIT PFG
Sbjct: 242 -DTITNPFG 242

[Close]

BLAST of Spg000564 vs. NCBI nr
Match: XP_038877911.1 (uncharacterized protein LOC120070122 [Benincasa hispida])

HSP 1 Score: 406.8 bits (1044), Expect = 1.4e-109
Identity = 197/234 (84.19%), Postives = 216/234 (92.31%), Query Frame = 0


Query: 8   AMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQIQ 67
           AMR ++   +V ++L+   + INTNDIYSPCLD+KIQ+SDGFTFGVAFSSKESFFQDQIQ
Sbjct: 3   AMRMMIVALIVMLLLLLAVEGINTNDIYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQ 62

Query: 68  FSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARSLP 127
            SPCDSRLALASKNAQLAVFRP VDQL+FLTINSSTFNPAM GGYMVAFAG+KYAARSLP
Sbjct: 63  LSPCDSRLALASKNAQLAVFRPEVDQLSFLTINSSTFNPAMNGGYMVAFAGKKYAARSLP 122

Query: 128 VMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVPSSKCKYN 187
           VM+TDNS+TITSFTLVFEFQKGTLQNL WKKFGCDKC+GDFSVCLDNQDCAV SSKCKYN
Sbjct: 123 VMITDNSHTITSFTLVFEFQKGTLQNLLWKKFGCDKCSGDFSVCLDNQDCAVQSSKCKYN 182

Query: 188 GGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVSG 242
           GGSVDCN+ IQLAFSGTDKNLEVLNSW+EVDNLRR+SLY+LFSDVRDT+T   G
Sbjct: 183 GGSVDCNLSIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYKLFSDVRDTVTNPFG 236

[Close]

BLAST of Spg000564 vs. NCBI nr
Match: XP_023513242.1 (uncharacterized protein LOC111777756 [Cucurbita pepo subsp. pepo] >XP_023521760.1 uncharacterized protein LOC111785616 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 5.4e-109
Identity = 198/241 (82.16%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MSEGRTAAMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKES 60
           +SEGR  AMRT VTV LV  VLV VA+ I+TND+YSPCLDAKIQKSDGFTFG+AFSSKE+
Sbjct: 2   ISEGRMGAMRT-VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEA 61

Query: 61  FFQDQIQFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQK 120
           FFQDQIQFSPCD+RLAL  KN QLA+FRP VDQL+ LTINS+TFNPAM GGYMVAFAG K
Sbjct: 62  FFQDQIQFSPCDTRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLK 121

Query: 121 YAARSLPVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVP 180
           YAARSLPVM+TDNS+TITSFTLVFEFQKGTLQNLFWKK+GC+KCTGDFSVCLDNQDCAV 
Sbjct: 122 YAARSLPVMITDNSHTITSFTLVFEFQKGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVS 181

Query: 181 SSKCKYNGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVS 240
           SSKCKY+GGSVDCNI IQLAFSGTD+NLEVLNSWFE+DNL R+SL++LF+DVRDT+T   
Sbjct: 182 SSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEIDNLMRFSLFKLFADVRDTVTNPF 241

Query: 241 G 242
           G
Sbjct: 242 G 241

[Close]

BLAST of Spg000564 vs. NCBI nr
Match: XP_022944397.1 (uncharacterized protein LOC111448855 [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 9.2e-109
Identity = 199/241 (82.57%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MSEGRTAAMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKES 60
           MSEGR  AM T VTV LV  VLV VA+ I+TND+YSPCLDAKIQKSDGFTFG+AFSSKE+
Sbjct: 2   MSEGRMGAMGT-VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEA 61

Query: 61  FFQDQIQFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQK 120
           FFQDQIQFSPCDSRLAL  KN QLA+FRP VDQL+ LTINS+TFNPAM GGYMVAFAG K
Sbjct: 62  FFQDQIQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLK 121

Query: 121 YAARSLPVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVP 180
           YAARSLPVM+TDNS+TITSFTLVFEFQ+GTLQNLFWKK+GC+KCTGDFSVCLDNQDCAV 
Sbjct: 122 YAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVS 181

Query: 181 SSKCKYNGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVS 240
           SSKCKY+GGSVDCNI IQLAFSGTD+NLEVLNSWFEVDNL R+SL++LF+DVRDT+T   
Sbjct: 182 SSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPF 241

Query: 241 G 242
           G
Sbjct: 242 G 241

[Close]

BLAST of Spg000564 vs. NCBI nr
Match: XP_011649210.1 (uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736519.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736520.1 uncharacterized protein LOC101222204 [Cucumis sativus] >KAE8651859.1 hypothetical protein Csa_006582 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 2.7e-108
Identity = 191/230 (83.04%), Postives = 215/230 (93.48%), Query Frame = 0


Query: 12  VVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQIQFSPC 71
           ++ VALV  +L+ V + I+TND+YSPCLD+KIQ+SDGFTFGVAFSSKESFFQDQIQFSPC
Sbjct: 6   IMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPC 65

Query: 72  DSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARSLPVMVT 131
           D+RL+LASK AQL VFRP VDQL+FLTINSSTFNPA+ GGYMVAFAGQKYAARSLPVM+T
Sbjct: 66  DTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMIT 125

Query: 132 DNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVPSSKCKYNGGSV 191
           DNSNTITSFTLV EFQ+G LQNLFWKKFGCDKC+GDFS+C+DNQDCA+P+SKCKYNGGSV
Sbjct: 126 DNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSV 185

Query: 192 DCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVSG 242
           DCN+GIQLAFSGTDKNLEVLNSW+EVDNLRR+SLYQLFSDVRDT+T   G
Sbjct: 186 DCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of Spg000564 vs. ExPASy TrEMBL
Match: A0A6J1D4C1 (uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017155 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.6e-112
Identity = 202/249 (81.12%), Postives = 226/249 (90.76%), Query Frame = 0


Query: 7   AAMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQI 66
           AAMRT  T+AL AM+L+ VA+  +TND++SPCLDAK+Q+SDGFTFGVAFSSKESFFQDQI
Sbjct: 2   AAMRT-ATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 61

Query: 67  QFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARSL 126
           QFSPCD RL LASKNAQL VFRP VDQL+ LTINS+TFNPA+ GGYMVAFAGQKYAARSL
Sbjct: 62  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 121

Query: 127 PVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVPSSKCKY 186
           PV++TDNSNTITSFTLV EFQKGTLQNLFWKKFGCDKCTGD+SVCLDNQDCAVP++KCK+
Sbjct: 122 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 181

Query: 187 NGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVSGTITNV 246
           NGGS+DCN+ IQLAFSGTD+NLEVLNSWFEVDNLRRYSLY+LFSDVRDTI++V       
Sbjct: 182 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVH------ 241

Query: 247 TDTITKPFG 256
            DTIT PFG
Sbjct: 242 -DTITNPFG 242

[Close]

BLAST of Spg000564 vs. ExPASy TrEMBL
Match: A0A6J1FVK1 (uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC111448855 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.5e-109
Identity = 199/241 (82.57%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MSEGRTAAMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKES 60
           MSEGR  AM T VTV LV  VLV VA+ I+TND+YSPCLDAKIQKSDGFTFG+AFSSKE+
Sbjct: 2   MSEGRMGAMGT-VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEA 61

Query: 61  FFQDQIQFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQK 120
           FFQDQIQFSPCDSRLAL  KN QLA+FRP VDQL+ LTINS+TFNPAM GGYMVAFAG K
Sbjct: 62  FFQDQIQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLK 121

Query: 121 YAARSLPVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVP 180
           YAARSLPVM+TDNS+TITSFTLVFEFQ+GTLQNLFWKK+GC+KCTGDFSVCLDNQDCAV 
Sbjct: 122 YAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVS 181

Query: 181 SSKCKYNGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVS 240
           SSKCKY+GGSVDCNI IQLAFSGTD+NLEVLNSWFEVDNL R+SL++LF+DVRDT+T   
Sbjct: 182 SSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPF 241

Query: 241 G 242
           G
Sbjct: 242 G 241

[Close]

BLAST of Spg000564 vs. ExPASy TrEMBL
Match: A0A1S3CA87 (uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108
Identity = 191/230 (83.04%), Postives = 219/230 (95.22%), Query Frame = 0


Query: 12  VVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQIQFSPC 71
           ++ VALV  +L+ VA+ I+TND+YSPCLD+KIQ+SDGFTFGVAFSSKESFFQDQIQFSPC
Sbjct: 6   MMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPC 65

Query: 72  DSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARSLPVMVT 131
           D+RL+LASKNAQLAVFRP VDQL+FLTI++STFNPA+ GGYMVAFAGQKYAARSLPVMVT
Sbjct: 66  DARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSLPVMVT 125

Query: 132 DNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVPSSKCKYNGGSV 191
           DNS+TITSFTLVFEF++GTLQNLFWKKFGCDKC+GDFS+C+DNQDCA+ SSKCKY+GGSV
Sbjct: 126 DNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKYSGGSV 185

Query: 192 DCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVSG 242
           DCN+GIQLAFSGTDKNLEVLNSW+E+DNLRR+SLYQLFSDVRDT+T   G
Sbjct: 186 DCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of Spg000564 vs. ExPASy TrEMBL
Match: A0A5D3CQC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00800 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108
Identity = 191/230 (83.04%), Postives = 219/230 (95.22%), Query Frame = 0


Query: 12  VVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQIQFSPC 71
           ++ VALV  +L+ VA+ I+TND+YSPCLD+KIQ+SDGFTFGVAFSSKESFFQDQIQFSPC
Sbjct: 6   MMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPC 65

Query: 72  DSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARSLPVMVT 131
           D+RL+LASKNAQLAVFRP VDQL+FLTI++STFNPA+ GGYMVAFAGQKYAARSLPVMVT
Sbjct: 66  DARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSLPVMVT 125

Query: 132 DNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVPSSKCKYNGGSV 191
           DNS+TITSFTLVFEF++GTLQNLFWKKFGCDKC+GDFS+C+DNQDCA+ SSKCKY+GGSV
Sbjct: 126 DNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKYSGGSV 185

Query: 192 DCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVSG 242
           DCN+GIQLAFSGTDKNLEVLNSW+E+DNLRR+SLYQLFSDVRDT+T   G
Sbjct: 186 DCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of Spg000564 vs. ExPASy TrEMBL
Match: A0A6J1JGG7 (uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.9e-108
Identity = 198/241 (82.16%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MSEGRTAAMRTVVTVALVAMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKES 60
           +SEGR  AMRT VTV LV  VLV VA+  +TN+IYSPCLDAKIQKSDGFTFG+AFSSKE+
Sbjct: 5   ISEGRMGAMRT-VTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEA 64

Query: 61  FFQDQIQFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQK 120
           FFQDQIQFSPCDSRLAL  KN QLA+FRP VDQL+ LTINS+TFNPAM GGYMVAFAG K
Sbjct: 65  FFQDQIQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLK 124

Query: 121 YAARSLPVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFSVCLDNQDCAVP 180
           YAARSLPVM+TDNS+TITSFTLVFEFQ+GTLQNLFWKK+GC+KCTGDFSVCLDNQDC V 
Sbjct: 125 YAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVS 184

Query: 181 SSKCKYNGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTITEVS 240
           SSKCKY+GGSVDCNI IQLAFSGTD+NLEVLNSWFEVDNL R+SL++LFSDVRDT+T   
Sbjct: 185 SSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPF 244

Query: 241 G 242
           G
Sbjct: 245 G 244

[Close]

BLAST of Spg000564 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-77
Identity = 142/244 (58.20%), Postives = 181/244 (74.18%), Query Frame = 0


Query: 9   MRTVVTVALVAMVLVSVAD---AINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQ 68
           MR   T+ ++ M+++ V D   A + N +YSPC D +I K DGFT G+A SSKE+FF DQ
Sbjct: 120 MRNSTTIMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ 179

Query: 69  IQFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARS 128
           +Q SPCD+RL LA+K AQLA+FRP VD+++ L+I++S FNP+  GG+MV FAG KYAARS
Sbjct: 180 VQLSPCDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARS 239

Query: 129 LPVMVTDNSNTITSFT---------LVFEFQKGTLQNLFWKKFGCDKCTG---DFSVCLD 188
            PV V D SNTIT+FT         LV EFQKG LQNLFWK FGCD C G     SVCL+
Sbjct: 240 YPVKVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLN 299

Query: 189 NQDCAVPSSKCKYNGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVR 238
             DCAVP+SKCK NGG  +CNIGIQ+AFSGTD+NLE LN+W+EV+NLR+YSL  L+++  
Sbjct: 300 GTDCAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAV 359

[Close]

BLAST of Spg000564 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 267.7 bits (683), Expect = 9.6e-72
Identity = 130/233 (55.79%), Postives = 182/233 (78.11%), Query Frame = 0


Query: 13  VTVALVAMVLVSVA------DAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFFQDQ- 72
           +T+ + + V+++VA       + NTN IYSPC D +IQ+SDGFTFG+AFSS+ SFF +Q 
Sbjct: 7   LTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQT 66

Query: 73  IQFSPCDSRLALASKNAQLAVFRPMVDQLTFLTINSSTFNPAMTGGYMVAFAGQKYAARS 132
           +  SPCD RL+LA+ N+Q +VFRP +D+++ L+IN+S F P   GGYMVAFAG+KYAARS
Sbjct: 67  VLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARS 126

Query: 133 LPVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFS-VCLDNQDCAVPSSKC 192
           +P  + +++  +TSFTLV EFQKG LQNL+WK+ GC  C G+ + VCL+ QDCA+ +  C
Sbjct: 127 IPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSC 186

Query: 193 KYNGGSVDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTIT 238
           K  GG+VDC++GIQLAFSGTDK+L VLNSW+EV+NL++YSLY L+S+++ ++T
Sbjct: 187 KGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLT 239

[Close]

BLAST of Spg000564 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 262.3 bits (669), Expect = 4.0e-70
Identity = 125/227 (55.07%), Postives = 171/227 (75.33%), Query Frame = 0


Query: 19  AMVLVSVADAINTNDIYSPCLDAKIQKSDGFTFGVAFSSKESFF----QDQIQFSPCDSR 78
           A++  S+ +A + N +YSPC D+ +   DGFTFG+AF++K+SFF       +Q+SPCD R
Sbjct: 13  AVLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHR 72

Query: 79  LALASKNAQLAVFRPMVDQLTFLTIN---SSTFNPAMTGGYMVAFAGQKYAARSLPVMVT 138
               + N+++AVFRP VD++T LTIN   SS+F P  + GYMVAFAG KYAARSLP+MV 
Sbjct: 73  HLSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVA 132

Query: 139 DNSNTITSFTLVFEFQKGTLQNLFWKKFGCDKCTGDFS-VCLDNQDCAVPSSKCKYNGGS 198
           D+++ +TSFTLV EFQKG L+N+FWKK GC KC+GD   VCL+ ++CA+    CK  GG 
Sbjct: 133 DSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQ 192

Query: 199 VDCNIGIQLAFSGTDKNLEVLNSWFEVDNLRRYSLYQLFSDVRDTIT 238
           VDC++GIQLAFSGTDK+   LNSW+EV NL++YSLY L+S+++D++T
Sbjct: 193 VDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLT 239

[Close]

BLAST of Spg000564 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 112 YMVAFAGQKYAARSLPVMVTDNSNTITSFTLVFEFQKGTLQNLFWKKFGCDK 164
           Y V   G +  +   P  + +++  +TSFT V EFQKG LQNL+WK+  C K
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of Spg000564 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148528.1	2.0e-111	81.12	uncharacterized protein LOC111017155 [Momordica charantia]	[more]
XP_038877911.1	1.4e-109	84.19	uncharacterized protein LOC120070122 [Benincasa hispida]	[more]
XP_023513242.1	5.4e-109	82.16	uncharacterized protein LOC111777756 [Cucurbita pepo subsp. pepo] >XP_023521760....	[more]
XP_022944397.1	9.2e-109	82.57	uncharacterized protein LOC111448855 [Cucurbita moschata]	[more]
XP_011649210.1	2.7e-108	83.04	uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharact...	[more]

BLAST of Spg000564 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg000564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4C1	9.6e-112	81.12	uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1FVK1	4.5e-109	82.57	uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A1S3CA87	2.2e-108	83.04	uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=...	[more]
A0A5D3CQC8	2.2e-108	83.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1JGG7	2.9e-108	82.16	uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289...	[more]

BLAST of Spg000564 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15910.1	1.5e-77	58.20	CSL zinc finger domain-containing protein	[more]
AT3G44150.1	9.6e-72	55.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	4.0e-70	55.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G48630.1	1.6e-05	42.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 10..238
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 10..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000564.1	Spg000564.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding