Spg000557 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000557
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor TCP7
Location	scaffold8: 45480176 .. 45480715 (-)
RNA-Seq Expression	Spg000557
Synteny	Spg000557

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCAAACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA

mRNA sequence

ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCAAACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA

Coding sequence (CDS)

ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCAAACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA

Protein sequence

MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

Homology

[Close]

BLAST of Spg000557 vs. NCBI nr
Match: XP_038900506.1 (transcription factor TCP16-like [Benincasa hispida])

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82
Identity = 166/180 (92.22%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           M+VKKATSNSPRNAPK NS NASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL
Sbjct: 6   MKVKKATSNSPRNAPKPNSPNASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDP-SSSNFSTTTSCF 120
           TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASA LDLPGC+P DP SSSN STTT+ F
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLPGCKPFDPSSSSNLSTTTNFF 125

Query: 121 EEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD 180
           EE TFDGNNYAFPMANE IPLPNYEFDLVSDFDMELFAHHIA LQEVAENSERETEDDDD
Sbjct: 126 EE-TFDGNNYAFPMANECIPLPNYEFDLVSDFDMELFAHHIAMLQEVAENSERETEDDDD 184

[Close]

BLAST of Spg000557 vs. NCBI nr
Match: XP_004145813.1 (transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa_020689 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 161/181 (88.95%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           MRVK+ TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL
Sbjct: 6   MRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGC-RPSDPSSSNF-STTTSC 120
           TRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLPGC +P DPSSSN  STTTS 
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNSTTTSY 125

Query: 121 FEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 180
           FEE+T  GNNYAFPM NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETEDDD
Sbjct: 126 FEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQETEDDD 185

[Close]

BLAST of Spg000557 vs. NCBI nr
Match: XP_008465370.1 (PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription factor TCP7 [Cucumis melo var. makuwa] >TYK22396.1 transcription factor TCP7 [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 5.9e-78
Identity = 160/181 (88.40%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           MRVKK TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL
Sbjct: 6   MRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGC-RPSDPSSSNF-STTTSC 120
           TRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLPGC +P DPSSSN  STTTS 
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINSTTTSY 125

Query: 121 FEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 180
           FEE+T  GNNYAFP  NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETED D
Sbjct: 126 FEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQETEDGD 185

[Close]

BLAST of Spg000557 vs. NCBI nr
Match: XP_022996075.1 (transcription factor TCP14-like [Cucurbita maxima])

HSP 1 Score: 278.1 bits (710), Expect = 5.3e-71
Identity = 147/178 (82.58%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           MRVKKATSNSPR  P     NASESK IPSKA KDRHAKV GRDRRIRLPPLCAARVFQL
Sbjct: 6   MRVKKATSNSPRGVP-----NASESKPIPSKALKDRHAKVQGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDPSSSNFSTTTSCFE 120
           TRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAA +L GC+P+DPSSS  +TTT+   
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGCKPTDPSSSTTTTTTA--- 125

Query: 121 EKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 179
            KTFDGNNYAFP  +E++PLPNYEFDLVSDFDMELFAHHI TLQEVAENSERE EDDD
Sbjct: 126 -KTFDGNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSEREAEDDD 174

[Close]

BLAST of Spg000557 vs. NCBI nr
Match: XP_022140679.1 (transcription factor TCP15-like [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 4.5e-70
Identity = 149/181 (82.32%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQ--NASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVF 60
           MRVKKATS+SPRNAPKSNS   NASESK +PSKAPKDRHAKVHGRDRRIRLPPLCAARVF
Sbjct: 6   MRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVF 65

Query: 61  QLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDPSSSNFSTTTSC 120
           QLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAAL+L  C PS PSSSN S TTSC
Sbjct: 66  QLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPS-PSSSNLSATTSC 125

Query: 121 FEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 180
           F+++T   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN E++   D 
Sbjct: 126 FQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENLEQDDGQDS 180

[Close]

BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 25  SKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSI 84
           S V+     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSI
Sbjct: 31  SVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI 90

Query: 85  IALTGKDIASAA 97
           IA TG     A+
Sbjct: 91  IAATGTGTTPAS 102

[Close]

BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 19  SQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLK 78
           + N      +     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL+
Sbjct: 17  TSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLR 76

Query: 79  KAEPSIIALTGKDIASAALDLPGCRPSDP 108
           +AEPSIIA TG     A+        S P
Sbjct: 77  QAEPSIIAATGTGTTPASFSTASLSTSSP 105

[Close]

BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 5   KATSNSPRNAPKSNSQNASESKVIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARV 64
           ++  + P+   K   Q   ES V+ +K P       KDRH KV GR RRIR+P LCAARV
Sbjct: 82  QSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARV 141

Query: 65  FQLTRELGNKTDGQTVEWLLKKAEPSIIALTG-----KDIASAALDLPGCRPSDPSSSNF 124
           FQLTRELG+K+DG+T+EWLL++AEPS+IA TG      +  S  + L     S    S+F
Sbjct: 142 FQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHF 201

Query: 125 STTTSCFEEKTFDGNNYAFP 133
            +  S     TF  NN   P
Sbjct: 202 RSAAS-----TFSPNNIFSP 216

[Close]

BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-19
Identity = 43/56 (76.79%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 34  KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG 90
           KDRH KV GR RRIR+P LCAARVFQLTRELG+KTDG+T+EWLL++AEP+I+A TG
Sbjct: 153 KDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATG 208

[Close]

BLAST of Spg000557 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 15  PKSNSQNASESKVIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTV 74
           P   SQN  ++++ P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T+
Sbjct: 61  PNKKSQN--QNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETI 120

Query: 75  EWLLKKAEPSIIALTGKDIASAA 97
           +WLL++AEPSIIA TG     A+
Sbjct: 121 QWLLQQAEPSIIAATGSGTIPAS 141

[Close]

BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A0A0KDC7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 161/181 (88.95%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           MRVK+ TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL
Sbjct: 6   MRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGC-RPSDPSSSNF-STTTSC 120
           TRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLPGC +P DPSSSN  STTTS 
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNSTTTSY 125

Query: 121 FEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 180
           FEE+T  GNNYAFPM NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETEDDD
Sbjct: 126 FEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQETEDDD 185

[Close]

BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A5A7T0X8 (Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00200 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78
Identity = 160/181 (88.40%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           MRVKK TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL
Sbjct: 6   MRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGC-RPSDPSSSNF-STTTSC 120
           TRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLPGC +P DPSSSN  STTTS 
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINSTTTSY 125

Query: 121 FEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 180
           FEE+T  GNNYAFP  NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETED D
Sbjct: 126 FEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQETEDGD 185

[Close]

BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A1S3CNQ2 (transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78
Identity = 160/181 (88.40%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           MRVKK TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL
Sbjct: 6   MRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGC-RPSDPSSSNF-STTTSC 120
           TRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLPGC +P DPSSSN  STTTS 
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINSTTTSY 125

Query: 121 FEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 180
           FEE+T  GNNYAFP  NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETED D
Sbjct: 126 FEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQETEDGD 185

[Close]

BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A6J1K5P6 (transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.6e-71
Identity = 147/178 (82.58%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQL 60
           MRVKKATSNSPR  P     NASESK IPSKA KDRHAKV GRDRRIRLPPLCAARVFQL
Sbjct: 6   MRVKKATSNSPRGVP-----NASESKPIPSKALKDRHAKVQGRDRRIRLPPLCAARVFQL 65

Query: 61  TRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDPSSSNFSTTTSCFE 120
           TRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAA +L GC+P+DPSSS  +TTT+   
Sbjct: 66  TRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGCKPTDPSSSTTTTTTA--- 125

Query: 121 EKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 179
            KTFDGNNYAFP  +E++PLPNYEFDLVSDFDMELFAHHI TLQEVAENSERE EDDD
Sbjct: 126 -KTFDGNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSEREAEDDD 174

[Close]

BLAST of Spg000557 vs. ExPASy TrEMBL
Match: A0A6J1CGC4 (transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.2e-70
Identity = 149/181 (82.32%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MRVKKATSNSPRNAPKSNSQ--NASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVF 60
           MRVKKATS+SPRNAPKSNS   NASESK +PSKAPKDRHAKVHGRDRRIRLPPLCAARVF
Sbjct: 6   MRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLCAARVF 65

Query: 61  QLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDPSSSNFSTTTSC 120
           QLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAAL+L  C PS PSSSN S TTSC
Sbjct: 66  QLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNPS-PSSSNLSATTSC 125

Query: 121 FEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD 180
           F+++T   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN E++   D 
Sbjct: 126 FQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENLEQDDGQDS 180

[Close]

BLAST of Spg000557 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 25  SKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSI 84
           S V+     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSI
Sbjct: 31  SVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI 90

Query: 85  IALTGKDIASAA 97
           IA TG     A+
Sbjct: 91  IAATGTGTTPAS 102

[Close]

BLAST of Spg000557 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 19  SQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLK 78
           + N      +     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL+
Sbjct: 17  TSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLR 76

Query: 79  KAEPSIIALTGKDIASAALDLPGCRPSDP 108
           +AEPSIIA TG     A+        S P
Sbjct: 77  QAEPSIIAATGTGTTPASFSTASLSTSSP 105

[Close]

BLAST of Spg000557 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-20
Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 5   KATSNSPRNAPKSNSQNASESKVIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARV 64
           ++  + P+   K   Q   ES V+ +K P       KDRH KV GR RRIR+P LCAARV
Sbjct: 82  QSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARV 141

Query: 65  FQLTRELGNKTDGQTVEWLLKKAEPSIIALTG-----KDIASAALDLPGCRPSDPSSSNF 124
           FQLTRELG+K+DG+T+EWLL++AEPS+IA TG      +  S  + L     S    S+F
Sbjct: 142 FQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHF 201

Query: 125 STTTSCFEEKTFDGNNYAFP 133
            +  S     TF  NN   P
Sbjct: 202 RSAAS-----TFSPNNIFSP 216

[Close]

BLAST of Spg000557 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 94.7 bits (234), Expect = 7.8e-20
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 15  PKSNSQNASESKVIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTV 74
           P   SQN  ++++ P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T+
Sbjct: 61  PNKKSQN--QNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETI 120

Query: 75  EWLLKKAEPSIIALTGKDIASAA 97
           +WLL++AEPSIIA TG     A+
Sbjct: 121 QWLLQQAEPSIIAATGSGTIPAS 141

[Close]

BLAST of Spg000557 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 3   VKKATSNSPRNAPKSNSQNASESKVIPS----KAPKDRHAKVHGRDRRIRLPPLCAARVF 62
           V  + S  PR+ P  +S  A+ S    +    ++ KDRH KV GR RRIR+P LCAARVF
Sbjct: 26  VDASLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVF 85

Query: 63  QLTRELGNKTDGQTVEWLLKKAEPSIIALTG 90
           QLTRELG+K+DG+T+EWLL++AEP+I+A TG
Sbjct: 86  QLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

The following BLAST results are available for this feature:

BLAST of Spg000557 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900506.1	1.4e-82	92.22	transcription factor TCP16-like [Benincasa hispida]	[more]
XP_004145813.1	4.1e-79	88.95	transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa...	[more]
XP_008465370.1	5.9e-78	88.40	PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription ...	[more]
XP_022996075.1	5.3e-71	82.58	transcription factor TCP14-like [Cucurbita maxima]	[more]
XP_022140679.1	4.5e-70	82.32	transcription factor TCP15-like [Momordica charantia]	[more]

BLAST of Spg000557 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	1.7e-19	65.28	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9FTA2	2.2e-19	53.93	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q93Z00	2.9e-19	44.29	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q53PH2	3.8e-19	76.79	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]
Q9LSD5	1.1e-18	57.83	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]

BLAST of Spg000557 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDC7	2.0e-79	88.95	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV...	[more]
A0A5A7T0X8	2.9e-78	88.40	Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CNQ2	2.9e-78	88.40	transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1	[more]
A0A6J1K5P6	2.6e-71	82.58	transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4...	[more]
A0A6J1CGC4	2.2e-70	82.32	transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 P...	[more]

BLAST of Spg000557 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	1.2e-20	65.28	TCP family transcription factor	[more]
AT5G08330.1	1.6e-20	53.93	TCP family transcription factor	[more]
AT3G47620.1	2.1e-20	44.29	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT3G27010.1	7.8e-20	57.83	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G58100.1	1.0e-19	54.95	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 33..119 e-value: 1.1E-26 score: 94.2
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 33..87 score: 25.429598
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR31072:SF123	TRANSCRIPTION FACTOR PCF1-LIKE	coord: 8..176
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 8..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000557.1	Spg000557.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding