Spg000444 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000444
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ferroxidase
Location	scaffold8: 41595992 .. 41597855 (-)
RNA-Seq Expression	Spg000444
Synteny	Spg000444

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGCAGTTTGAAGCCGGTCGCTGTACCAATGGCTACCAAACTGCTTCCACTGCGGAAGCTTTCAAGGATACTGAAGCTGCCGTCTTCTTCTTCTTCCTCTTTCAGGAAGTTTTCATATCTTTTAGAAGCTTCAAGACCTCCCCTCGATCTCTCCCATAATGTTCATCAGTTTCATCCTCCGTCTTTTTCTCGAAACTTCTGCTCCCGCCCTCTGGATTTCATCGGCGATGATCCTCGAGGCCCTGCCACCATTGATTATAGGTAATTTGTTCATTTTCTTTCTTTCCTTTTTCGATTTTTCAACCTTTCTTTAGTAGAAACTGCGTATTTCAATCGAAATTTTGAAAAAGAAGCGAAAGTTTGTAAGTTCCACCCCTTCCCCCAATTTTTTGCAATCTTCAAGCCTTTTCAATTTGGTAATTGTTTTAGGTCTGCTTGATTCGTGAATTTTTGGTCCAATGTCTCCAATTGTTTTCACTTGTCTAATTTTTTACTAAACTGAAAATGGGTTCGTGGTAATTCAACAAAGTGTTGCGAAGGTCTTACCTTTAGTTCAATTTCCCTTGATGGACAAATTACAGTTTCTATTCATGGGGTTTTCTTTGAGCGTTGGTATGATAGTTGAATGCATTTGGTAGAGAAGGGCTCAAGTGATCTTGGCTAATCTTTGCTGCAGTTCTCTGATGCAGGAGGGAGAGTTTCATAATCTAGCTGATTCCACAATACAGGGTCTGCAAGAGAAATTAGAGGTAATTGTATGTCGATGAATTGCCATTTTTTTCCCTCTCTTGATTTTATTCTTATGAATTGTATTTTTCATGTACATATTTCCGAATTGCTGCTAAAAATTTTGTTAAGTTTATTTCATTGCTTGCCAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGGTGAGAATGACTTAGCAGTTCTAAGATTTGATGATTTCATTTCATATGTATACATAATGCTTAATTTTATCCAATTTTCATTACGCAGAATGAGGTACTGACCTTAAGGCTCGGCGATCTCGGCACCTACGTCTTGAACAAACAAACGCCAAACAGACAACTTTGGCTTTCTTCCCCTGTGAGGTATCATGCTTCCCTAGTGACTTATTTTCCCGTTGAATGATTAGAATGTCAATCTACAATGTTTATCCTTTCCATTTGTTTCAAAGATCATTTCAGACCTTGTACCTGTTTCCATTTCATGACAAAGTTCAGCACTTGTCTTTTCAAAGTCTTTAGTAATAATGGAACTTGTTTCTGTTCATATAACAACATTTACCCATTCATAAGAGCATGCCTAATATCCCTAGATGTCTTTAACTTATATAAGAGCAGAAAAGAAGGAATGAGACTAGTTTTAATTTGGTCCTGAGAGAACGAGGAACATATATTTAGGCATTGTACACAACTTTGTGACAACCCAGGTTATGTTCTTCCTTGCAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGCGGAACAAAGCAAACCTGTTGAGGCTCTTAGAAACTGAATTGGCGCAGCTCTGTGGTGAGCCAATTGACCTTTCTTGAGCCCTTTAAATAACTTGGACATGGTGAGGTTATTCTGAAGCATTTAGACGCATATTTATGCAGCTCTTTCAGTTTGGTTTACCTTCTTAACTATCCCAGAGCCCACATCTTTTTCTCGTCTTCATTCTACCTGTTGCATTATATGCAATAATATGTTCTGATTCTATTGCTTCGAGTATAACTATTCATGATTAACTTGAGCTATGCTCAACTGACCAAGATATAATTAATCTTTTAAAAAGCGAAAGATATGACTTCCC

mRNA sequence

ATGCTCTGCAGTTTGAAGCCGGTCGCTGTACCAATGGCTACCAAACTGCTTCCACTGCGGAAGCTTTCAAGGATACTGAAGCTGCCGTCTTCTTCTTCTTCCTCTTTCAGGAAGTTTTCATATCTTTTAGAAGCTTCAAGACCTCCCCTCGATCTCTCCCATAATGTTCATCAGTTTCATCCTCCGTCTTTTTCTCGAAACTTCTGCTCCCGCCCTCTGGATTTCATCGGCGATGATCCTCGAGGCCCTGCCACCATTGATTATAGTTCTCTGATGCAGGAGGGAGAGTTTCATAATCTAGCTGATTCCACAATACAGGGTCTGCAAGAGAAATTAGAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGAATGAGGTACTGACCTTAAGGCTCGGCGATCTCGGCACCTACGTCTTGAACAAACAAACGCCAAACAGACAACTTTGGCTTTCTTCCCCTGTGAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGCGGAACAAAGCAAACCTGTTGAGGCTCTTAGAAACTGAATTGGCGCAGCTCTGTGGTGAGCCAATTGACCTTTCTTGA

Coding sequence (CDS)

ATGCTCTGCAGTTTGAAGCCGGTCGCTGTACCAATGGCTACCAAACTGCTTCCACTGCGGAAGCTTTCAAGGATACTGAAGCTGCCGTCTTCTTCTTCTTCCTCTTTCAGGAAGTTTTCATATCTTTTAGAAGCTTCAAGACCTCCCCTCGATCTCTCCCATAATGTTCATCAGTTTCATCCTCCGTCTTTTTCTCGAAACTTCTGCTCCCGCCCTCTGGATTTCATCGGCGATGATCCTCGAGGCCCTGCCACCATTGATTATAGTTCTCTGATGCAGGAGGGAGAGTTTCATAATCTAGCTGATTCCACAATACAGGGTCTGCAAGAGAAATTAGAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGAATGAGGTACTGACCTTAAGGCTCGGCGATCTCGGCACCTACGTCTTGAACAAACAAACGCCAAACAGACAACTTTGGCTTTCTTCCCCTGTGAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGCGGAACAAAGCAAACCTGTTGAGGCTCTTAGAAACTGAATTGGCGCAGCTCTGTGGTGAGCCAATTGACCTTTCTTGA

Protein sequence

MLCSLKPVAVPMATKLLPLRKLSRILKLPSSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNFCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGEPIDLS

Homology

[Close]

BLAST of Spg000444 vs. NCBI nr
Match: XP_022971111.1 (frataxin, mitochondrial [Cucurbita maxima])

HSP 1 Score: 357.8 bits (917), Expect = 6.0e-95
Identity = 177/196 (90.31%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 71
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE +RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 72  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 131
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH L DSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 132 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 191
           YGNEVLTLRLGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRRNKANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 192 LETELAQLCGEPIDLS 204
           LETELAQLCGEPI+LS
Sbjct: 181 LETELAQLCGEPINLS 196

[Close]

BLAST of Spg000444 vs. NCBI nr
Match: KAG6604827.1 (Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.0 bits (907), Expect = 8.7e-94
Identity = 176/198 (88.89%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 10  VPMATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFS 69
           V MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE++RP LDLS NVHQFHPPSFS
Sbjct: 27  VTMATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFS 86

Query: 70  RNFCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFD 129
           R+FCSRPLDF+GDD RGPATIDYSSLMQEGEFH LADSTI GLQEKLEEYGDDLQIDGFD
Sbjct: 87  RSFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFD 146

Query: 130 VDYGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLL 189
           VDYGNEVLTLRLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRR+KANLL
Sbjct: 147 VDYGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLL 206

Query: 190 RLLETELAQLCGEPIDLS 204
           RLLETEL QLCGEPI+LS
Sbjct: 207 RLLETELTQLCGEPINLS 224

[Close]

BLAST of Spg000444 vs. NCBI nr
Match: XP_022947402.1 (frataxin, mitochondrial [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93
Identity = 175/196 (89.29%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 71
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE++RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 72  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 131
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH LADSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 132 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 191
           YGNEVLTLRLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 192 LETELAQLCGEPIDLS 204
           LETEL QLCGEPI+LS
Sbjct: 181 LETELTQLCGEPINLS 196

[Close]

BLAST of Spg000444 vs. NCBI nr
Match: XP_023533562.1 (frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 174/196 (88.78%), Postives = 184/196 (93.88%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 71
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE +RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 72  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 131
           FCSRPLDF+GDD RGPATIDYSSLM EGEFH LADSTI GLQEKLEE+GDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMHEGEFHRLADSTIHGLQEKLEEFGDDLQIDGFDVD 120

Query: 132 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 191
           YGNEVLTLRLGDLGTYVLNKQTPNRQ+WLSSP SGPSRFDWDQ+SQAWIYRRNKANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPASGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 192 LETELAQLCGEPIDLS 204
           LETELAQLCG+PI+LS
Sbjct: 181 LETELAQLCGKPINLS 196

[Close]

BLAST of Spg000444 vs. NCBI nr
Match: XP_022140770.1 (frataxin, mitochondrial [Momordica charantia])

HSP 1 Score: 349.4 bits (895), Expect = 2.1e-92
Identity = 172/195 (88.21%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLPSSSSSS---FRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNF 71
           MATKLLPLRKLSRILK+PSSSS S   FR++SYLLEASRP L +S NVHQFHPPSFSR+F
Sbjct: 1   MATKLLPLRKLSRILKVPSSSSYSSPCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRSF 60

Query: 72  CSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDY 131
           CSRPLDF+ DD RGPA+IDYSSLMQEG+FH LADSTI GLQEKLEEYGDDLQIDGFDVDY
Sbjct: 61  CSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDY 120

Query: 132 GNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 191
           GNEVLTL+LGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL
Sbjct: 121 GNEVLTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 180

Query: 192 ETELAQLCGEPIDLS 204
           ETELA+LCGEPI LS
Sbjct: 181 ETELAELCGEPIGLS 195

[Close]

BLAST of Spg000444 vs. ExPASy Swiss-Prot
Match: Q9ZR07 (Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 3.8e-52
Identity = 109/189 (57.67%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 19  LRKLSRILKLPSS--SSSSFRKFSYLLEASRPPLDLSHNVHQ--FHPPSFSRNFCSRPLD 78
           LRKL R LKL  +   S+  R  S L++ S  PLD    +     H    +R+F S    
Sbjct: 9   LRKLPRFLKLSPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSFSS---- 68

Query: 79  FIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLT 138
                 +GPA++DYSS++QE EFH LA+ TI  L EK+E+YGD++QIDGFD+DYGNEVLT
Sbjct: 69  ------QGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEVLT 128

Query: 139 LRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQ 198
           L+LG LGTYVLNKQTPNRQ+W+SSPVSGPSRFDWD+++ AWIYRR +A L +LLE EL  
Sbjct: 129 LKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEELEN 187

Query: 199 LCGEPIDLS 204
           LCGEPI LS
Sbjct: 189 LCGEPIQLS 187

[Close]

BLAST of Spg000444 vs. ExPASy Swiss-Prot
Match: O35943 (Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 81  RGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 140
           R   T+D  S + E  +  LA+ T+  L E  E+  D    ++ +DV +G+ VLT++L G
Sbjct: 76  RNLGTLDNPSSLDETAYERLAEETLDSLAEFFEDLADKPYTLEDYDVSFGDGVLTIKLGG 135

Query: 141 DLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGE 200
           DLGTYV+NKQTPN+Q+WLSSP SGP R+DW    + W+Y  +  +L  LL  EL +    
Sbjct: 136 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLARELTKALNT 195

Query: 201 PIDLS 204
            +DLS
Sbjct: 196 KLDLS 198

[Close]

BLAST of Spg000444 vs. ExPASy Swiss-Prot
Match: Q05B87 (Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 81  RGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 140
           R   T+  +  + +  +  LA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 80  RTAGTLGDAGTLDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 139

Query: 141 DLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGE 200
           DLGTYV+NKQTPN+Q+WLSSP SGP R+DW    + W+Y  +  +L  LL TEL Q    
Sbjct: 140 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGRNWVYSHDGVSLHELLATELTQALKT 199

Query: 201 PIDLS 204
            +DLS
Sbjct: 200 KLDLS 202

[Close]

BLAST of Spg000444 vs. ExPASy Swiss-Prot
Match: Q16595 (Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.5e-21
Identity = 52/125 (41.60%), Postives = 75/125 (60.00%), Query Frame = 0


Query: 81  RGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 140
           R   T+ +   + E  +  LA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 79  RKSGTLGHPGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 138

Query: 141 DLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGE 200
           DLGTYV+NKQTPN+Q+WLSSP SGP R+DW    + W+Y  +  +L  LL  EL +    
Sbjct: 139 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLAAELTKALKT 198

Query: 201 PIDLS 204
            +DLS
Sbjct: 199 KLDLS 201

[Close]

BLAST of Spg000444 vs. ExPASy Swiss-Prot
Match: O74831 (Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1183.03c PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.6e-20
Identity = 42/116 (36.21%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 86  IDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGDLGTYVL 145
           + ++  + + E+H +AD T+  L +  E+  +++    +D+ Y N V+TL LG+ GTYV+
Sbjct: 36  VRHNGALTDLEYHRVADDTLDVLNDTFEDLLEEVGKKDYDIQYANGVITLMLGEKGTYVI 95

Query: 146 NKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGEPID 202
           NKQ P  Q+WLSSPVSGP  +++   S+ W   R++  LL +L +E ++    PI+
Sbjct: 96  NKQPPAHQIWLSSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSEFSKWFSRPIE 151

[Close]

BLAST of Spg000444 vs. ExPASy TrEMBL
Match: A0A6J1I2E7 (Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.9e-95
Identity = 177/196 (90.31%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 71
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE +RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 72  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 131
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH L DSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 132 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 191
           YGNEVLTLRLGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRRNKANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 192 LETELAQLCGEPIDLS 204
           LETELAQLCGEPI+LS
Sbjct: 181 LETELAQLCGEPINLS 196

[Close]

BLAST of Spg000444 vs. ExPASy TrEMBL
Match: A0A6J1G6C8 (Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.2e-94
Identity = 175/196 (89.29%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 71
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE++RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 72  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 131
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH LADSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 132 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 191
           YGNEVLTLRLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 192 LETELAQLCGEPIDLS 204
           LETEL QLCGEPI+LS
Sbjct: 181 LETELTQLCGEPINLS 196

[Close]

BLAST of Spg000444 vs. ExPASy TrEMBL
Match: A0A6J1CG34 (Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 172/195 (88.21%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLPSSSSSS---FRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNF 71
           MATKLLPLRKLSRILK+PSSSS S   FR++SYLLEASRP L +S NVHQFHPPSFSR+F
Sbjct: 1   MATKLLPLRKLSRILKVPSSSSYSSPCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRSF 60

Query: 72  CSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDY 131
           CSRPLDF+ DD RGPA+IDYSSLMQEG+FH LADSTI GLQEKLEEYGDDLQIDGFDVDY
Sbjct: 61  CSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDY 120

Query: 132 GNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 191
           GNEVLTL+LGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL
Sbjct: 121 GNEVLTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 180

Query: 192 ETELAQLCGEPIDLS 204
           ETELA+LCGEPI LS
Sbjct: 181 ETELAELCGEPIGLS 195

[Close]

BLAST of Spg000444 vs. ExPASy TrEMBL
Match: A0A0A0KAC6 (Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.8e-90
Identity = 169/200 (84.50%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 4   SLKPVAVPMATKLLPLRKLSRILKLPSSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPS 63
           + KPV V MA KLLPLRKLSRILKLPS SS SFRKF +LLEAS P + + +NVHQFHPPS
Sbjct: 25  NFKPVDVAMA-KLLPLRKLSRILKLPSYSSCSFRKFPHLLEASSPLIHIFNNVHQFHPPS 84

Query: 64  FSRNFCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDG 123
           F R+FCSRPLD +GDD RGPATIDYSSLMQEGEFH LAD  IQGLQEKLEEYGD+LQIDG
Sbjct: 85  FLRSFCSRPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFAIQGLQEKLEEYGDNLQIDG 144

Query: 124 FDVDYGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKAN 183
           FDVDYGNEVLTLRLG+LGTYVLNKQTPNRQ+WLSSP+SGPSRFDWDQNSQ WIYRRNKAN
Sbjct: 145 FDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQTWIYRRNKAN 204

Query: 184 LLRLLETELAQLCGEPIDLS 204
           LL LLETEL QLCGEPIDLS
Sbjct: 205 LLSLLETELTQLCGEPIDLS 223

[Close]

BLAST of Spg000444 vs. ExPASy TrEMBL
Match: A0A1S3BJ48 (Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 166/192 (86.46%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 12  MATKLLPLRKLSRILKLPSSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNFCSR 71
           MATKLLPL KLSRILKLPSSSS SFRK  YLLEAS P + +S+NVHQF PPSFS++FCSR
Sbjct: 1   MATKLLPLHKLSRILKLPSSSSCSFRKCPYLLEASIPLIHISNNVHQFQPPSFSQSFCSR 60

Query: 72  PLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNE 131
           PLD +GDD RGPATIDYSSLMQEGEFH LAD TIQGLQEKLEEYGD+LQIDGFDVDYGNE
Sbjct: 61  PLDIVGDDSRGPATIDYSSLMQEGEFHRLADFTIQGLQEKLEEYGDNLQIDGFDVDYGNE 120

Query: 132 VLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETE 191
           VLTLRLG+LGTYVLNKQTPNRQ+WLSSP+SGPSRFDWDQNS+AWIYRRNKANLL LLETE
Sbjct: 121 VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSRAWIYRRNKANLLSLLETE 180

Query: 192 LAQLCGEPIDLS 204
           L QLCGEPI+LS
Sbjct: 181 LMQLCGEPINLS 192

[Close]

BLAST of Spg000444 vs. TAIR 10
Match: AT4G03240.1 (frataxin homolog )

HSP 1 Score: 206.1 bits (523), Expect = 2.7e-53
Identity = 109/189 (57.67%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 19  LRKLSRILKLPSS--SSSSFRKFSYLLEASRPPLDLSHNVHQ--FHPPSFSRNFCSRPLD 78
           LRKL R LKL  +   S+  R  S L++ S  PLD    +     H    +R+F S    
Sbjct: 9   LRKLPRFLKLSPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSFSS---- 68

Query: 79  FIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLT 138
                 +GPA++DYSS++QE EFH LA+ TI  L EK+E+YGD++QIDGFD+DYGNEVLT
Sbjct: 69  ------QGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEVLT 128

Query: 139 LRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQ 198
           L+LG LGTYVLNKQTPNRQ+W+SSPVSGPSRFDWD+++ AWIYRR +A L +LLE EL  
Sbjct: 129 LKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEELEN 187

Query: 199 LCGEPIDLS 204
           LCGEPI LS
Sbjct: 189 LCGEPIQLS 187

The following BLAST results are available for this feature:

BLAST of Spg000444 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971111.1	6.0e-95	90.31	frataxin, mitochondrial [Cucurbita maxima]	[more]
KAG6604827.1	8.7e-94	88.89	Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947402.1	1.5e-93	89.29	frataxin, mitochondrial [Cucurbita moschata]	[more]
XP_023533562.1	1.9e-93	88.78	frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022140770.1	2.1e-92	88.21	frataxin, mitochondrial [Momordica charantia]	[more]

BLAST of Spg000444 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR07	3.8e-52	57.67	Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2	[more]
O35943	1.9e-22	43.20	Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1	[more]
Q05B87	1.2e-21	42.40	Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1	[more]
Q16595	3.5e-21	41.60	Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2	[more]
O74831	6.6e-20	36.21	Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]

BLAST of Spg000444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2E7	2.9e-95	90.31	Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1	[more]
A0A6J1G6C8	7.2e-94	89.29	Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1	[more]
A0A6J1CG34	1.0e-92	88.21	Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1	[more]
A0A0A0KAC6	4.8e-90	84.50	Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1	[more]
A0A1S3BJ48	1.4e-89	86.46	Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1	[more]

BLAST of Spg000444 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03240.1	2.7e-53	57.67	frataxin homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002908	Frataxin/CyaY	PRINTS	PR00904	FRATAXIN	coord: 92..110 score: 31.58 coord: 145..160 score: 75.0 coord: 130..145 score: 43.75
IPR002908	Frataxin/CyaY	SMART	SM01219	Frataxin_Cyay_2	coord: 92..203 e-value: 1.8E-48 score: 177.0
IPR002908	Frataxin/CyaY	PFAM	PF01491	Frataxin_Cyay	coord: 92..199 e-value: 1.9E-36 score: 124.4
IPR002908	Frataxin/CyaY	TIGRFAM	TIGR03421	TIGR03421	coord: 94..201 e-value: 9.2E-24 score: 81.4
IPR002908	Frataxin/CyaY	PANTHER	PTHR16821	FRATAXIN	coord: 33..202
IPR002908	Frataxin/CyaY	PROSITE	PS50810	FRATAXIN_2	coord: 92..200 score: 29.229841
IPR036524	Frataxin/CyaY superfamily	GENE3D	3.30.920.10	Frataxin/CyaY	coord: 84..203 e-value: 2.2E-41 score: 142.6
IPR036524	Frataxin/CyaY superfamily	SUPERFAMILY	55387	Frataxin/Nqo15-like	coord: 83..200
IPR017789	Frataxin	TIGRFAM	TIGR03422	TIGR03422	coord: 96..193 e-value: 5.0E-35 score: 117.7
None	No IPR available	PANTHER	PTHR16821:SF2	FRATAXIN, MITOCHONDRIAL	coord: 33..202
None	No IPR available	CDD	cd00503	Frataxin	coord: 92..202 e-value: 6.59022E-42 score: 135.086
IPR020895	Frataxin conserved site	PROSITE	PS01344	FRATAXIN_1	coord: 144..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000444.1	Spg000444.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006879	cellular iron ion homeostasis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006811	ion transport
biological_process	GO:0018283	iron incorporation into metallo-sulfur cluster
biological_process	GO:1903329	regulation of iron-sulfur cluster assembly
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008199	ferric iron binding
molecular_function	GO:0008198	ferrous iron binding
molecular_function	GO:0004322	ferroxidase activity
molecular_function	GO:0034986	iron chaperone activity