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Spg000443 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAGCTAGGCATTCAGCGCATTGCCCTTTTGCTGCACTCTCAAAGCGGCCATCAAAGTGCAAGTTTCAGATCAAAGAACCTTTGAAAGCTTCAACGAGTAACGATGAAAGCTTCAGAGCTTTCAACTCCAAACAATCCAACGAATGCTGCAGAATGCAAGGACAGGCCCCAAAAACCGCCTTTCAGGCCTGCTAAAGATGACACCAAGCTTGTTCTCCAAGATCCGGTTCTCTCTCTCCCAAATTAACTCTTACTACTAATTTTTTTCTATCTATTCTTGAGTTTTGTTGCATGAATGTGCACGAATTGAAGATTGTTCCTGTTTCTTTTCCCCCCTCCATTGCTGTCTCTTGTGATAGATACGGAGGTCAGATCCGATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTCCGAAATCAAAGAGTCCTTCTAAAATGGGGTGAAAATGTTGTTTTCTTATTTTGGTGTTCTGTCTGTTCTTGGTCCATGCCATGATCGAACAGCAGTTGATGAAAATAGAAATTTCAGTTTTTTCTGCGCATTATTGTTTTGTGCCCGAGACTGAATAGAAGTTCCACTATCTAGCTGAATGAAATTTTGATTCCAAGTTATATAACTTTTCCCTGTGATGGTAGAAAAGAATGATGACCCTCATTAGTCATCAATGACCTGATCGTGCGTGCCAAGTGTTCGATGAAATTCTTAAGTGGGAAGTAAGCTTTGAGATGACCAACCACTTCACTTTTTTTTTTCCACCAAACGCCTAGAGCGTTGATTTGCCTCCGTCCGGGCTGATGAGGGCAACTGCGGGAGCCTTTTGGAACATTCAGAGCTGATTCAAATCTCCATAAGCAAATAAGAAATGATACAGGTACGCCCTCGCTCTGTATATCCTCTTACTTCACTCGGCATCCAAAACGCATATTTTAGGGCGTTTGTACTTGTACACGAATGAAACTCATACCTTGAAATGCAAAAAGTTGCTTCTGGTTTGTAGAATTGAAATTCAGTAGAATATTGTTCGAAAGAATACTGATGGTTTGGGAACAAAAGTGTTTCCATTTGCATCCCCAAACTTAGCTTAGCGTATAAGGTTGTTTGCG ATGAAAGCTTCAGAGCTTTCAACTCCAAACAATCCAACGAATGCTGCAGAATGCAAGGACAGGCCCCAAAAACCGCCTTTCAGGCCTGCTAAAGATGACACCAAGCTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCGATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTCCGAAATCAAAGAGTCCTTCTAAAATGGGGTGA ATGAAAGCTTCAGAGCTTTCAACTCCAAACAATCCAACGAATGCTGCAGAATGCAAGGACAGGCCCCAAAAACCGCCTTTCAGGCCTGCTAAAGATGACACCAAGCTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCGATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTCCGAAATCAAAGAGTCCTTCTAAAATGGGGTGA MKASELSTPNNPTNAAECKDRPQKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVPKSKSPSKMG Homology
BLAST of Spg000443 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima]) HSP 1 Score: 134.0 bits (336), Expect = 5.2e-28 Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 0
BLAST of Spg000443 vs. NCBI nr
Match: KAG7035826.1 (hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 129.8 bits (325), Expect = 9.7e-27 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Spg000443 vs. NCBI nr
Match: KAG6605875.1 (hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26 Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Spg000443 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_017904 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 2.0e-24 Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Spg000443 vs. NCBI nr
Match: XP_028783480.1 (uncharacterized protein LOC114739565 isoform X1 [Prosopis alba]) HSP 1 Score: 79.3 bits (194), Expect = 1.5e-11 Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of Spg000443 vs. ExPASy TrEMBL
Match: A0A6J1K4U9 (uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.5e-28 Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 0
BLAST of Spg000443 vs. ExPASy TrEMBL
Match: A0A0A0KWV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.8e-25 Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Spg000443 vs. ExPASy TrEMBL
Match: A0A1U8FBL6 (uncharacterized protein LOC107855576 OS=Capsicum annuum OX=4072 GN=LOC107855576 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.3e-12 Identity = 45/69 (65.22%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Spg000443 vs. ExPASy TrEMBL
Match: A0A1Q3CXU0 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-11 Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 0
BLAST of Spg000443 vs. ExPASy TrEMBL
Match: A0A1U7ZV42 (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 6.2e-11 Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of Spg000443 vs. TAIR 10
Match: AT2G20480.1 (unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 1.0e-10 Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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