Spg000404 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000404
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cyclin-dependent protein kinase inhibitor SMR13
Location	scaffold8: 47096144 .. 47096916 (-)
RNA-Seq Expression	Spg000404
Synteny	Spg000404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGACGAAGAAACAGCCGCAACAACAACAACAACAGCAACAGAAGCAGATTCCGGCGACACAGAACGACCCCGCCTTTCAATTTTCCGACGACGACGACGACGACGGCGGCTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACGTGTCCACCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCATTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGTCGCTCTGCCGAACATTTCAGTCTGAAGCTCAAAGCTAATCAAGGCTCGTGTGTTTATACAAATTTTACAGACACATCAAAAAAAAAAAAAAAAAAAAAAAATACCAAGTTCTTATTTTTCTCCTCTTTTTTTGTTAGATATTAGTTTGAATAAGTTTGGCTTTCCTTTTTTTTGTGTGAGAATTTGAGCTTGGAGATGCAGAATTTGAAATTGGGTTTGCTCTGTAATATTATTATCAATATAATTTTTTCTTTTTTTTGGATTGGGGAATTTTGAAGAACTGTGTAATGTTTGTCCCACAACTTTCCCTTGTGATAATTTGAAGCAATGGGTCACTTTATTTTGAAGTGTAATGAAATGGGTCAATGGTGGGAGCCATTTTTTATGGTGCTCTGTTTAAAAAGCTTGAGACTTTCTTTATGGGTTTAGGGTTTTGAAGGTAGTTATGGTTATGGTGCAGATTCCAAGACCAAGGATGAAGAAGAAGAAGAAGATGATGAGTAA

mRNA sequence

ATGAAGAAGACGAAGAAACAGCCGCAACAACAACAACAACAGCAACAGAAGCAGATTCCGGCGACACAGAACGACCCCGCCTTTCAATTTTCCGACGACGACGACGACGACGGCGGCTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACGTGTCCACCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCATTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGTCGCTCTGCCGAACATTTCAGGTTTTGAAGGTAGTTATGGTTATGGTGCAGATTCCAAGACCAAGGATGAAGAAGAAGAAGAAGATGATGAGTAA

Coding sequence (CDS)

ATGAAGAAGACGAAGAAACAGCCGCAACAACAACAACAACAGCAACAGAAGCAGATTCCGGCGACACAGAACGACCCCGCCTTTCAATTTTCCGACGACGACGACGACGACGGCGGCTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACGTGTCCACCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCATTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGTCGCTCTGCCGAACATTTCAGGTTTTGAAGGTAGTTATGGTTATGGTGCAGATTCCAAGACCAAGGATGAAGAAGAAGAAGAAGATGATGAGTAA

Protein sequence

MKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNISGFEGSYGYGADSKTKDEEEEEDDE

Homology

[Close]

BLAST of Spg000404 vs. NCBI nr
Match: XP_038902266.1 (cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida])

HSP 1 Score: 131.0 bits (328), Expect = 7.1e-27
Identity = 71/94 (75.53%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 1   MKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDD-DDDDGGCSTPKAERFRIPEILTCPPA 60
           +K TKK  + ++QQQQ QIPAT  +   QF+D+  D DGGCSTPKAER RIPEILTCPPA
Sbjct: 12  LKLTKKIKKTKKQQQQNQIPATVQNDIVQFTDECSDTDGGCSTPKAERHRIPEILTCPPA 71

Query: 61  PKKQRAVSDCSFRRSPIAFFAPPELELFFFVALP 94
           PKK RAVSDCSFRRSPIAFFAPPELELFFFV+LP
Sbjct: 72  PKKPRAVSDCSFRRSPIAFFAPPELELFFFVSLP 105

[Close]

BLAST of Spg000404 vs. NCBI nr
Match: XP_022148810.1 (cyclin-dependent protein kinase inhibitor SMR15-like [Momordica charantia])

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 73/95 (76.84%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 1   MKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAP 60
           MKKTKK     QQQQ+   PAT+ND   Q S +DD DGGCSTP+AERFRIPEI+TCPPAP
Sbjct: 24  MKKTKK-----QQQQKLPAPATEND-VVQCS-NDDIDGGCSTPRAERFRIPEIVTCPPAP 83

Query: 61  KKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNI 96
           KKQR VSDCSFRRSPIAFFAPPELELFFF ALP+I
Sbjct: 84  KKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDI 111

[Close]

BLAST of Spg000404 vs. NCBI nr
Match: KAG7035865.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 72/99 (72.73%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 2   KKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD----DGGCSTPKAERFRIPEILTCP 61
           KK KK   ++ QQ Q QIP  QND   QF DDDDD     GG STPKAERFRIPEILTCP
Sbjct: 23  KKIKKTTTKKPQQPQNQIPPPQND-VVQFPDDDDDGGGGGGGYSTPKAERFRIPEILTCP 82

Query: 62  PAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNIS 97
           P PKKQR +SDCSFRRSPIAFFAPPELELFFF+A P+IS
Sbjct: 83  PGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDIS 120

[Close]

BLAST of Spg000404 vs. NCBI nr
Match: KAG6605917.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25
Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 2   KKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDD-DDGGCSTPKAERFRIPEILTCPPAP 61
           KK KK   ++ QQ Q QIP  QND   QF DDDD   GG STPKAERFRIPEILTCPP P
Sbjct: 23  KKIKKTTTKKPQQPQNQIPPPQND-VVQFPDDDDGGGGGYSTPKAERFRIPEILTCPPGP 82

Query: 62  KKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNIS 97
           KKQR +SDCSFRRSPIAFFAPPELELFFF+A P+IS
Sbjct: 83  KKQRPISDCSFRRSPIAFFAPPELELFFFIARPDIS 117

[Close]

BLAST of Spg000404 vs. NCBI nr
Match: XP_022996084.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita maxima])

HSP 1 Score: 125.2 bits (313), Expect = 3.9e-25
Identity = 71/99 (71.72%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 2   KKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDD----GGCSTPKAERFRIPEILTCP 61
           KK KK   ++ QQ Q QIP  QND   QF DDD D+    GG STPKAERFRIPEILTCP
Sbjct: 16  KKMKKTTTKKPQQPQNQIPPPQND-VVQFPDDDFDNDDVGGGYSTPKAERFRIPEILTCP 75

Query: 62  PAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNIS 97
           P PKKQR VSDCSFRRSPIAFFAPPELELFFF++ P+IS
Sbjct: 76  PGPKKQRPVSDCSFRRSPIAFFAPPELELFFFISRPDIS 113

[Close]

BLAST of Spg000404 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 38  GGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 89
           GGC TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Spg000404 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 37  DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVAL 93
           + GC TP  E+ RIPE+LTCPPAPKKQ+   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of Spg000404 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 31  SDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 89
           S+ +D+D   +TP A+  RIP ++ CPPAPKK++     S+   P  FF+PP+LE  F
Sbjct: 46  SNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]

BLAST of Spg000404 vs. ExPASy Swiss-Prot
Match: Q9LNX4 (Cyclin-dependent protein kinase inhibitor SMR5 OS=Arabidopsis thaliana OX=3702 GN=SMR5 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-04
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 33 DDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELFFFV 91
          DDD   GC+TP  +  RIP    CPP  +++R++     +R P    +F PP+L+LFF V
Sbjct: 15 DDDYQMGCTTPTRDDCRIPAYPPCPPPVRRKRSLLGFGKKREPPKKGYFQPPDLDLFFSV 74

[Close]

BLAST of Spg000404 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.1e-04
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 26  PAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELE 85
           P    ++ ++ D   +TP A   RIP +  CP APKK++    CS+      +F+PP+LE
Sbjct: 42  PGVTVTETEEQDQCPTTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLE 101

Query: 86  LFF 89
             F
Sbjct: 102 TVF 104

[Close]

BLAST of Spg000404 vs. ExPASy TrEMBL
Match: A0A6J1D3Z6 (cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3673 GN=LOC111017372 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.8e-27
Identity = 73/95 (76.84%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 1   MKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAP 60
           MKKTKK     QQQQ+   PAT+ND   Q S +DD DGGCSTP+AERFRIPEI+TCPPAP
Sbjct: 24  MKKTKK-----QQQQKLPAPATEND-VVQCS-NDDIDGGCSTPRAERFRIPEIVTCPPAP 83

Query: 61  KKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNI 96
           KKQR VSDCSFRRSPIAFFAPPELELFFF ALP+I
Sbjct: 84  KKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDI 111

[Close]

BLAST of Spg000404 vs. ExPASy TrEMBL
Match: A0A6J1K7R4 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 GN=LOC111491400 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.9e-25
Identity = 71/99 (71.72%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 2   KKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDD----GGCSTPKAERFRIPEILTCP 61
           KK KK   ++ QQ Q QIP  QND   QF DDD D+    GG STPKAERFRIPEILTCP
Sbjct: 16  KKMKKTTTKKPQQPQNQIPPPQND-VVQFPDDDFDNDDVGGGYSTPKAERFRIPEILTCP 75

Query: 62  PAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNIS 97
           P PKKQR VSDCSFRRSPIAFFAPPELELFFF++ P+IS
Sbjct: 76  PGPKKQRPVSDCSFRRSPIAFFAPPELELFFFISRPDIS 113

[Close]

BLAST of Spg000404 vs. ExPASy TrEMBL
Match: A0A6J1JET4 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=LOC111484378 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.2e-25
Identity = 73/98 (74.49%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1   MKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDD-DDDDGGCSTPKAERFRIPEILTCPPA 60
           +KKTKKQ QQQQQQ+ KQIPA   + A  F+DD  D DGGCSTPKAERFRIPEILTCPPA
Sbjct: 25  IKKTKKQ-QQQQQQKLKQIPAVIPNDAVHFTDDCSDIDGGCSTPKAERFRIPEILTCPPA 84

Query: 61  PKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPNIS 97
           PKK R  SDCS RRSPIAFFAPPELELFF  + +P+IS
Sbjct: 85  PKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPDIS 121

[Close]

BLAST of Spg000404 vs. ExPASy TrEMBL
Match: A0A6J1FTJ6 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN=LOC111448665 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.1e-25
Identity = 72/98 (73.47%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1   MKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD-DGGCSTPKAERFRIPEILTCPPA 60
           +KKTKKQ QQQQQQ+ KQIPA   + A  F+DD  D DGGCSTPKAERFRIP+ILTCPPA
Sbjct: 25  IKKTKKQ-QQQQQQKLKQIPAAIPNDAVHFTDDSTDIDGGCSTPKAERFRIPDILTCPPA 84

Query: 61  PKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPNIS 97
           PKK R  SDCS RRSPIAFFAPPELELFF  + +P+IS
Sbjct: 85  PKKPRPSSDCSLRRSPIAFFAPPELELFFCALPVPDIS 121

[Close]

BLAST of Spg000404 vs. ExPASy TrEMBL
Match: A0A6J1H2X7 (cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=3662 GN=LOC111459621 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.0e-23
Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 2   KKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAPK 61
           K  KK  +   ++ Q QIP  QND   QF  DDD  GG STPKAERFRIPEILTCPP PK
Sbjct: 20  KVNKKIKKTTTKKPQNQIPPPQND-VVQF-PDDDGGGGYSTPKAERFRIPEILTCPPGPK 79

Query: 62  KQRAVSDCSFRRSPIAFFAPPELELFFFVALPNIS 97
           KQR +SDCSFRRSPIAFFAPPELELFFF+A P+IS
Sbjct: 80  KQRPISDCSFRRSPIAFFAPPELELFFFIARPDIS 112

[Close]

BLAST of Spg000404 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 38  GGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 89
           GGC TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Spg000404 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-15
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 37  DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVAL 93
           + GC TP  E+ RIPE+LTCPPAPKKQ+   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of Spg000404 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 8.7e-07
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 31  SDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 89
           S+ +D+D   +TP A+  RIP ++ CPPAPKK++     S+   P  FF+PP+LE  F
Sbjct: 46  SNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]

BLAST of Spg000404 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.6e-05
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 26  PAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELE 85
           P    ++ ++ D   +TP A   RIP +  CP APKK++    CS+      +F+PP+LE
Sbjct: 42  PGVTVTETEEQDQCPTTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLE 101

Query: 86  LFF 89
             F
Sbjct: 102 TVF 104

[Close]

BLAST of Spg000404 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0


Query: 39 GCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELFFF 90
          GC+TP++  +RIP    CPP P+K+  V     +R P    +F PP+LE  F+
Sbjct: 14 GCTTPRSTMYRIPVASVCPPPPRKKLMVVR---KRDPPRNGYFQPPDLETLFY 63

The following BLAST results are available for this feature:

BLAST of Spg000404 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902266.1	7.1e-27	75.53	cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida]	[more]
XP_022148810.1	1.2e-26	76.84	cyclin-dependent protein kinase inhibitor SMR15-like [Momordica charantia]	[more]
KAG7035865.1	3.5e-26	72.73	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
KAG6605917.1	1.0e-25	73.96	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_022996084.1	3.9e-25	71.72	cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita maxima]	[more]

BLAST of Spg000404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IWB3	2.9e-15	70.59	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3ECS5	1.2e-13	62.50	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	1.2e-05	43.10	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LNX4	1.0e-04	40.00	Cyclin-dependent protein kinase inhibitor SMR5 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SAD3	5.1e-04	34.92	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Spg000404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3Z6	5.8e-27	76.84	cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3...	[more]
A0A6J1K7R4	1.9e-25	71.72	cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1JET4	3.2e-25	74.49	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FTJ6	7.1e-25	73.47	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H2X7	3.0e-23	70.53	cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Spg000404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20898.1	2.1e-16	70.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51355.1	8.7e-15	62.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60783.1	8.7e-07	43.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10690.1	3.6e-05	34.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G02220.1	1.1e-04	39.62	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..28
None	No IPR available	PANTHER	PTHR33142:SF8	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 8..92
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 8..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000404.1	Spg000404.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus