Spg000378 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000378
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Location	scaffold8: 47653332 .. 47656987 (-)
RNA-Seq Expression	Spg000378
Synteny	Spg000378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGGCGTCTTCTTCTCATCTATCCGCCATTCCCCTGCGCCCCTCTTCCTCCTCTGCAGCTTCCTTATCCCACCGTGAGCACTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTAGCCTCTGCAAATTCTTTCCAGCTTGTGCCCAATTCTCCACTATCCTGCTACTTCCATTTTGTAGAGGGGTTTAATCTCCTCTGCTCAATGTTGTCGGCCGGAGTACGTCATTCCCTCTGTCTTTGTTCACCTCTTTAAACCATGTATATTCCTCTAATTTTTCTTTTGTTTTATTTTGTTTTATGCCGATTGAATTGTTTCTTATCACGTATGTATACTGAATTTCTGATGTATCAGCGGATATGCTTTTTCTTTCTGGTGGATGAGATGATTTGCCTCGACTTCGTTTCACTTTTCTGGACTGTTTCTGTATATACTTATCCCTTCCTTATCGAGTTTTGTGCTGTTGCTTGTCATCCCCTTCTCCAGTTGTTGTTTGGCACTATCTTATTCTTGGGTTGTGAAAGGTTCCGTTCCATTGATTCGCTAGTTAATCACAAGCAACAGAACTGCTAGTTTACTCCCGAGTTACTTTTAGCTCGGTTACAATTGGGTATTTATTTTTTAAATTGTATTGTACTAAATGACTGATCAAATCTCCTTCCAATGGGTATGGAAGTTTATTCTAAAATGGAAATGTATAATAATAATAGGATCTATTGCCTTGTATAAGATTGTGGACTTGTTTACGTTTTCATGTCTATGTCAATTGATTGAGCTTGGTGCAATTCTGTAGTACATTAGAAGGTTTCGTTAAGATAGCGTAACATGATGAAATGTTTTGGTAACTGTGAAAGATTGAAAGATTCCTACCACTATTTTGTAATGATCTGTGTAAAAAAACATGTTGATCATTCTATAGTAAGTTTTGACCCTTCTTTGCTCGAACTCAACAGCTAACTCAAAGCCCATTGTACTTCAAGTGACATCAAATTTTGACGATGAAAGATGTAGTACTGGAGATTCGAAAACACCATCAAAACCACTTAAGGTAAGGTTCTCGTTTACTTGGTCCCAAAAAAAAAGTTTCTTGTTTATCTAATTTGTCTTTTAAGCTTTCTTTCACCATAACAACAGCTCATTCATGGTAGTGATACTTGCTTTAGCTTCCTCATTGTATTTATAATTTACAACCACAATGCTTCACTGGGAAAGCAACGAGTTTAGCTCATATTTATAATCATTGTATTTAGAATTGACTACGGTAAATTTAATTCTTGGAATGTTTGTATTCATCTTTCTTGCATGGCTTGCTTCAGATCCTTTTAGATTTTTGGATGAGGGTGGCCGACAAAAGTATAATGCCATTGGAATATGAGAAAGTGCAAAAGCCTTGTAAATTTTCTCATCAGTTTTTAAAATCAATCAATTAACCATCTTTTAGAAAGTGAGACCTTAAGTGCATTTTCAATATGATTTCATATTTTCATCTTTTAGTAATTTAAATCTTACCTCTCTGTGACAGCGTTGAGATGTAAATTCATGGCTTTATTCATATATAGTCTGAAGTAGATTACTATGTACTTATCTTTCAATTAGTAATGTATAACAACTTCTTTTACCACAGGGAACTCAAATCTTAATCTCACGGAGATGGTGCCTCACATGTTTATGTTCATCTGTGACATTGATAAAGGATTATGGGGGCACAATGACTGAAGCTATTGCAAATACCATGGATGGAAAACCGGTGTGCCGGAATTGTGGAGGAAGTGGCGCCGTACTTTGTAAGTATGCCTTTTTGATTTTTTGGACATAACACCTTTTGTTCGTTGGATACAAAAAATTTCTCCTTCCATGGAAGGCTTGTAGATGAAAAGTATTGAGCTCCTTCATGGGGTTAGTGGAGTTGAATTTATGGCCTTATAACATTTAAATGTTAAAGAAATAAACCATATAAGCTAAGTAAAAAAGATCTTTTGGTATAAAGTAGGTAGGGAAATAGAATACTTTCTCTCTCAAAATACGTTATAAAAAAATTATGTCAGTTTGGCATTCTTTAGTTGGTTCATTATTTATGTTTTCTGGTGAAATTTTTCATCAAGTTCTTCCACACATGAGCTTATCTTGGAGTTAAAAGACTCCTTTCCGTTGCTTATTTTTTATGTTGCCCGTTGAAGAGTAATGCTTGGACTTTCCTTTCTGAAGATGTATTCAAGTTCGATGAGAACATACATGTACCTAATTATTGTTCATTTCCTTGCCTTAACAGTTAATTTTCTTTCTTTAGATCATCTTCATCTGTCTGCACTCGCTATTTTCCATGAGATGCTTACTGTTCTTCGCTTTAGGTGACATGTGCGGTGGTACAGGCAAATGGAAAGCTTTGAACAGAAAACGGGCTAAAGATGTCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAAATATTCATTTCTACGTACAAATTGTGGTGATCTCATTAATGAATATTGCATATATTTGCATGGTTTCAGTTTGATACAACTCCACATCTGCTGGAAAGTAATGTCCTCTTATGTTGTTTTTTGTAGCCTTGAGATGCAGAAAAATCAAATGCTTGTTATTTTTTTTTTTCATCAAGAAAATCAGACTTTAGCAGATGGTGAATGTTTTGATTCACCATGTTCTCATACAATCAATGATGTCATAGTTAGATGTTTAATTCGAACACTTGTGCAGATAGGCAATTTTTTGGAATAACTGTCACTCATTGGGGCAGTAATCTTGGGGATTGAGTTATCATCCTTAAATTGCTTGTACACACATCTTGTGCGTTTGTTTGAGATTAGATTATTTCTTTCATTGTGTTGGTTGTGAAACCAACACCAACAAACAGAAAACCCCGAGTCCATATCCCAAACCTTAAGAAAGAACTTTGTCGATCATTCACTATCTGTTCCCCAAAAGCTGCAGAACATCTTAGTTCAGCTAATGACTTGAATTTTAATATACTAACAGTAGAAAGAAAATTCATGTTGAATCTCACAAGCTAAAGAACATCCATAGTTGCGTCATAAACGTGTGATTGCTAAATCCAGGAAATATATTGCTCCTTTTAGACTTAATGATAATCTTGAACTACCAATCTTTGATCACTATGCTTCTCCAAAATGGTTATATTGAAACTACAGGTACTTGAATCTGTGATTGTAGTAAGCTGACCTATCGAGATCCCCTTACAATGACCAAATTCTGTAAATTCTGTTCCTAATTTACAGAAACGCCAACAAATAGGAAATGAGGGATTTCTGTTCCTTAGGCTTTCTTTGTTGCATTCATTGCTTGTTTGTGTTATTCACTGGCAATATTTATGTGTTGACAGACTACAACTGAGACGAGAGATTTAAATTTACCATTCATATGGATTTGAATGGGGATCAAATTTAAATTTGCAATATCAATGTGTTCCTTCGTTATTTGTGTTACTTTGTTTCTATCTTCATCTCTCTTCCTTTGTACTGATTTCAAATTTCTTGTGGCAGGTAGAGGAAAACTTGTATGTCCTGTTTGTCTAGGAACTGGTTTACCAAACAACAAAGGTCTTCTAAGAAGGCCCGATGCACGAAAATTGCTTGATAAGATGTACAATGGTCGCTTGTTACCAAATTCTTGA

mRNA sequence

ATGATGATGGCGTCTTCTTCTCATCTATCCGCCATTCCCCTGCGCCCCTCTTCCTCCTCTGCAGCTTCCTTATCCCACCGTGAGCACTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTAGCCTCTGCAAATTCTTTCCAGCTTGTGCCCAATTCTCCACTATCCTGCTACTTCCATTTTGTAGAGGGGTTTAATCTCCTCTGCTCAATGTTGTCGGCCGGACGGATATGCTTTTTCTTTCTGGTGGATGAGATGATTTGCCTCGACTTCGTTTCACTTTTCTGGACTGTTTCTGTATATACTTATCCCTTCCTTATCGAGTTTTGTGCTGTTGCTTGTCATCCCCTTCTCCAGTTGTTGTTTGGCACTATCTTATTCTTGGCTAACTCAAAGCCCATTGTACTTCAAGTGACATCAAATTTTGACGATGAAAGATGTAGTACTGGAGATTCGAAAACACCATCAAAACCACTTAAGGATTATGGGGGCACAATGACTGAAGCTATTGCAAATACCATGGATGGAAAACCGGTGTGCCGGAATTGTGGAGGAAGTGGCGCCGTACTTTGTGACATGTGCGGTGGTACAGGCAAATGGAAAGCTTTGAACAGAAAACGGGCTAAAGATGTCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGTCCTGTTTGTCTAGGAACTGGTTTACCAAACAACAAAGGTCTTCTAAGAAGGCCCGATGCACGAAAATTGCTTGATAAGATGTACAATGGTCGCTTGTTACCAAATTCTTGA

Coding sequence (CDS)

ATGATGATGGCGTCTTCTTCTCATCTATCCGCCATTCCCCTGCGCCCCTCTTCCTCCTCTGCAGCTTCCTTATCCCACCGTGAGCACTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTAGCCTCTGCAAATTCTTTCCAGCTTGTGCCCAATTCTCCACTATCCTGCTACTTCCATTTTGTAGAGGGGTTTAATCTCCTCTGCTCAATGTTGTCGGCCGGACGGATATGCTTTTTCTTTCTGGTGGATGAGATGATTTGCCTCGACTTCGTTTCACTTTTCTGGACTGTTTCTGTATATACTTATCCCTTCCTTATCGAGTTTTGTGCTGTTGCTTGTCATCCCCTTCTCCAGTTGTTGTTTGGCACTATCTTATTCTTGGCTAACTCAAAGCCCATTGTACTTCAAGTGACATCAAATTTTGACGATGAAAGATGTAGTACTGGAGATTCGAAAACACCATCAAAACCACTTAAGGATTATGGGGGCACAATGACTGAAGCTATTGCAAATACCATGGATGGAAAACCGGTGTGCCGGAATTGTGGAGGAAGTGGCGCCGTACTTTGTGACATGTGCGGTGGTACAGGCAAATGGAAAGCTTTGAACAGAAAACGGGCTAAAGATGTCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGTCCTGTTTGTCTAGGAACTGGTTTACCAAACAACAAAGGTCTTCTAAGAAGGCCCGATGCACGAAAATTGCTTGATAAGATGTACAATGGTCGCTTGTTACCAAATTCTTGA

Protein sequence

MMMASSSHLSAIPLRPSSSSAASLSHREHFLSLSLSLSSLASANSFQLVPNSPLSCYFHFVEGFNLLCSMLSAGRICFFFLVDEMICLDFVSLFWTVSVYTYPFLIEFCAVACHPLLQLLFGTILFLANSKPIVLQVTSNFDDERCSTGDSKTPSKPLKDYGGTMTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS

Homology

[Close]

BLAST of Spg000378 vs. NCBI nr
Match: XP_022996228.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-67
Identity = 127/159 (79.87%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           +NSKP+VLQVTSN DDE CSTGD  TPSKPL                       KDYGGT
Sbjct: 26  SNSKPVVLQVTSNLDDESCSTGDLSTPSKPLKGTPILISRRWCLTCLCSSPTLIKDYGGT 85

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
           M EAIANTMDGKP CRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 86  MAEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 145

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           LVCPVCLGTGLPNNKGLLRRPDARKLLDKM+NGRLLPNS
Sbjct: 146 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMFNGRLLPNS 184

[Close]

BLAST of Spg000378 vs. NCBI nr
Match: XP_004142153.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-66
Identity = 127/159 (79.87%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           AN KP+VL VTSN DDE CSTGDSKTPSKPL                       K YGGT
Sbjct: 27  ANLKPVVLHVTSNSDDESCSTGDSKTPSKPLKGTQKLISRRWCLTCLCSSVTLMKSYGGT 86

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
           +TEAIANTMDGKP CRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 87  VTEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 146

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           LVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNGRLLPNS
Sbjct: 147 LVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNS 185

[Close]

BLAST of Spg000378 vs. NCBI nr
Match: XP_011653566.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X2 [Cucumis sativus] >KAE8649480.1 hypothetical protein Csa_018113 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 2.6e-66
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           +N KP+VL VTSN DDE CSTGDSKTPSKPL                       K YGGT
Sbjct: 26  SNLKPVVLHVTSNSDDESCSTGDSKTPSKPLKGTQKLISRRWCLTCLCSSVTLMKSYGGT 85

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
           +TEAIANTMDGKP CRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 86  VTEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 145

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           LVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNGRLLPNS
Sbjct: 146 LVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNS 184

[Close]

BLAST of Spg000378 vs. NCBI nr
Match: XP_022958131.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata] >XP_023532563.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6605877.1 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035828.1 Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.1 bits (671), Expect = 2.6e-66
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           +NSKP+VLQVTSN DDE  +TGDS TPSKPL                       KDYGGT
Sbjct: 26  SNSKPVVLQVTSNLDDESSTTGDSSTPSKPLKGTRILISRRWCLTCLCSSPTLIKDYGGT 85

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
           M EAIANTMDGKP CRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 86  MAEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 145

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           LVCPVCLGTGLPNNKGLLRRPDARKLLDKM+NGRLLPNS
Sbjct: 146 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMFNGRLLPNS 184

[Close]

BLAST of Spg000378 vs. NCBI nr
Match: XP_016900747.1 (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 259.2 bits (661), Expect = 3.8e-65
Identity = 126/158 (79.75%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           ANSKP+VL +TSN DDE CSTGDS+TPSKPL                       K+YGGT
Sbjct: 13  ANSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGT 72

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
            TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 73  -TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 132

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPN 263
           LVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNGRLLPN
Sbjct: 133 LVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPN 169

[Close]

BLAST of Spg000378 vs. ExPASy Swiss-Prot
Match: Q6YUA8 (Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSA2 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 7.0e-46
Identity = 84/96 (87.50%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 169 IANTMDGKP-VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC 228
           +A+ M  KP VCRNC GSGAVLCDMCGGTGKWKALNRKRAKDVY FTECPNCYGRGKLVC
Sbjct: 92  LASDMMSKPAVCRNCNGSGAVLCDMCGGTGKWKALNRKRAKDVYLFTECPNCYGRGKLVC 151

Query: 229 PVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           PVCLGTGLPNNKGLLRRPDA+KLLDKMYNG++LP+S
Sbjct: 152 PVCLGTGLPNNKGLLRRPDAKKLLDKMYNGKILPDS 187

[Close]

BLAST of Spg000378 vs. ExPASy Swiss-Prot
Match: A0A1D6KL43 (Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Zea mays OX=4577 GN=PSA2 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-45
Identity = 81/101 (80.20%), Postives = 89/101 (88.12%), Query Frame = 0


Query: 163 GTMTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGR 222
           G   +A+      K VCRNC GSGAV+CDMCGGTGKWKALNRKRAKDVYEFTECPNCYGR
Sbjct: 96  GLAADAMNKAGVQKAVCRNCNGSGAVICDMCGGTGKWKALNRKRAKDVYEFTECPNCYGR 155

Query: 223 GKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           GKLVCPVCLGTGLPNNKGLLRRP+A++LLDKMYNG++LP S
Sbjct: 156 GKLVCPVCLGTGLPNNKGLLRRPEAKQLLDKMYNGKILPRS 196

[Close]

BLAST of Spg000378 vs. ExPASy Swiss-Prot
Match: O64750 (Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSA2 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.7e-45
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 170 ANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC 229
           A  +D KP   CRNC GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC
Sbjct: 91  AAALDKKPGGSCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC 150

Query: 230 PVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           PVCLGTGLPNNKGLLRRP AR+LL+KMYNGRLLP+S
Sbjct: 151 PVCLGTGLPNNKGLLRRPGARELLEKMYNGRLLPDS 186

[Close]

BLAST of Spg000378 vs. ExPASy Swiss-Prot
Match: B5YAR4 (Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.0e-06
Identity = 26/83 (31.33%), Postives = 40/83 (48.19%), Query Frame = 0


Query: 163 GTMTEAIANTMDGKPVCRNCG---GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNC 222
           G+  E     ++  P C+  G   G+  V CDMC GTG+ + + +       + T CP C
Sbjct: 146 GSEKEIYVTRLETCPTCKGKGTEPGTNPVKCDMCNGTGQIRNMRQTPFGQFVQITTCPKC 205

Query: 223 YGRGKLV---CPVCLGTGLPNNK 240
           +G G+++   C  C GTG    K
Sbjct: 206 HGTGQIIINPCHECHGTGKVRRK 228

[Close]

BLAST of Spg000378 vs. ExPASy Swiss-Prot
Match: Q7UA76 (Chaperone protein DnaJ OS=Synechococcus sp. (strain WH8102) OX=84588 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04
Identity = 26/74 (35.14%), Postives = 34/74 (45.95%), Query Frame = 0


Query: 179 CRNCGGSGA------VLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLV---CPV 238
           C  CGGSGA        C  CGG G+ +   R       +  ECPNC G G+++   C  
Sbjct: 146 CDTCGGSGAKAGSGPTTCGTCGGAGQVRRATRTPFGSFTQVAECPNCGGTGQVIADPCNA 205

Query: 239 CLGTGLPNNKGLLR 244
           C G G+   +  LR
Sbjct: 206 CGGQGVRQVRKKLR 219

[Close]

BLAST of Spg000378 vs. ExPASy TrEMBL
Match: A0A6J1KA92 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491517 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-67
Identity = 127/159 (79.87%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           +NSKP+VLQVTSN DDE CSTGD  TPSKPL                       KDYGGT
Sbjct: 26  SNSKPVVLQVTSNLDDESCSTGDLSTPSKPLKGTPILISRRWCLTCLCSSPTLIKDYGGT 85

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
           M EAIANTMDGKP CRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 86  MAEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 145

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           LVCPVCLGTGLPNNKGLLRRPDARKLLDKM+NGRLLPNS
Sbjct: 146 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMFNGRLLPNS 184

[Close]

BLAST of Spg000378 vs. ExPASy TrEMBL
Match: A0A0A0KX46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G285690 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.7e-67
Identity = 127/159 (79.87%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           AN KP+VL VTSN DDE CSTGDSKTPSKPL                       K YGGT
Sbjct: 27  ANLKPVVLHVTSNSDDESCSTGDSKTPSKPLKGTQKLISRRWCLTCLCSSVTLMKSYGGT 86

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
           +TEAIANTMDGKP CRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 87  VTEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 146

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           LVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNGRLLPNS
Sbjct: 147 LVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNS 185

[Close]

BLAST of Spg000378 vs. ExPASy TrEMBL
Match: A0A6J1H182 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111459453 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           +NSKP+VLQVTSN DDE  +TGDS TPSKPL                       KDYGGT
Sbjct: 26  SNSKPVVLQVTSNLDDESSTTGDSSTPSKPLKGTRILISRRWCLTCLCSSPTLIKDYGGT 85

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
           M EAIANTMDGKP CRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 86  MAEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 145

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           LVCPVCLGTGLPNNKGLLRRPDARKLLDKM+NGRLLPNS
Sbjct: 146 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMFNGRLLPNS 184

[Close]

BLAST of Spg000378 vs. ExPASy TrEMBL
Match: A0A5A7TFL6 (Protein EMBRYO SAC DEVELOPMENT ARREST 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00350 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.8e-65
Identity = 126/158 (79.75%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           ANSKP+VL +TSN DDE CSTGDS+TPSKPL                       K+YGGT
Sbjct: 3   ANSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGT 62

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
            TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 63  -TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 122

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPN 263
           LVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNGRLLPN
Sbjct: 123 LVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPN 159

[Close]

BLAST of Spg000378 vs. ExPASy TrEMBL
Match: A0A1S4DXP4 (protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491567 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.8e-65
Identity = 126/158 (79.75%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 128 ANSKPIVLQVTSNFDDERCSTGDSKTPSKPL-----------------------KDYGGT 187
           ANSKP+VL +TSN DDE CSTGDS+TPSKPL                       K+YGGT
Sbjct: 13  ANSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGT 72

Query: 188 MTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 247
            TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK
Sbjct: 73  -TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGK 132

Query: 248 LVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPN 263
           LVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNGRLLPN
Sbjct: 133 LVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPN 169

[Close]

BLAST of Spg000378 vs. TAIR 10
Match: AT2G34860.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 182.2 bits (461), Expect = 5.5e-46
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 170 ANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC 229
           A  +D KP   CRNC GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC
Sbjct: 91  AAALDKKPGGSCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC 150

Query: 230 PVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           PVCLGTGLPNNKGLLRRP AR+LL+KMYNGRLLP+S
Sbjct: 151 PVCLGTGLPNNKGLLRRPGARELLEKMYNGRLLPDS 186

[Close]

BLAST of Spg000378 vs. TAIR 10
Match: AT2G34860.2 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 182.2 bits (461), Expect = 5.5e-46
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 170 ANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC 229
           A  +D KP   CRNC GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC
Sbjct: 91  AAALDKKPGGSCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVC 150

Query: 230 PVCLGTGLPNNKGLLRRPDARKLLDKMYNGRLLPNS 264
           PVCLGTGLPNNKGLLRRP AR+LL+KMYNGRLLP+S
Sbjct: 151 PVCLGTGLPNNKGLLRRPGARELLEKMYNGRLLPDS 186

[Close]

BLAST of Spg000378 vs. TAIR 10
Match: AT5G06130.1 (chaperone protein dnaJ-related )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 24/67 (35.82%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 176 KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCP 235
           K  C+ C G+G + C  C  +G   +++   R RA +    V     C NC G GK++CP
Sbjct: 151 KKRCKYCLGTGYLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKVMCP 210

[Close]

BLAST of Spg000378 vs. TAIR 10
Match: AT5G06130.2 (chaperone protein dnaJ-related )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 24/67 (35.82%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 176 KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCP 235
           K  C+ C G+G + C  C  +G   +++   R RA +    V     C NC G GK++CP
Sbjct: 235 KKRCKYCLGTGYLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKVMCP 294

[Close]

BLAST of Spg000378 vs. TAIR 10
Match: AT5G03870.1 (Glutaredoxin family protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.8e-04
Identity = 20/68 (29.41%), Postives = 31/68 (45.59%), Query Frame = 0


Query: 163 GTMTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGR 222
           G + E I     G   CR CGG   ++C +C G+ K +   +K         +C  C   
Sbjct: 322 GILLEGIPAARLGGSCCRGCGGMRFMMCVVCNGSCKVREEEKK------SMVKCLKCNEN 381

Query: 223 GKLVCPVC 231
           G ++CP+C
Sbjct: 382 GLVLCPIC 383

The following BLAST results are available for this feature:

BLAST of Spg000378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996228.1	4.0e-67	79.87	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita maxima]	[more]
XP_004142153.1	1.2e-66	79.87	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_011653566.1	2.6e-66	79.25	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X2 [Cucumis sativus] >KA...	[more]
XP_022958131.1	2.6e-66	79.25	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata] >XP_0235325...	[more]
XP_016900747.1	3.8e-65	79.75	PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 [Cu...	[more]

BLAST of Spg000378 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YUA8	7.0e-46	87.50	Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Oryza sativa subsp. japonica ...	[more]
A0A1D6KL43	3.5e-45	80.20	Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Zea mays OX=4577 GN=PSA2 PE=2...	[more]
O64750	7.7e-45	87.50	Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B5YAR4	7.0e-06	31.33	Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 396...	[more]
Q7UA76	1.3e-04	35.14	Chaperone protein DnaJ OS=Synechococcus sp. (strain WH8102) OX=84588 GN=dnaJ PE=...	[more]

BLAST of Spg000378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KA92	2.0e-67	79.87	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KX46	5.7e-67	79.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G285690 PE=4 SV=1	[more]
A0A6J1H182	1.3e-66	79.25	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7TFL6	1.8e-65	79.75	Protein EMBRYO SAC DEVELOPMENT ARREST 3 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S4DXP4	1.8e-65	79.75	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 OS=Cucumis mel...	[more]

BLAST of Spg000378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34860.1	5.5e-46	87.50	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT2G34860.2	5.5e-46	87.50	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT5G06130.1	1.4e-04	35.82	chaperone protein dnaJ-related	[more]
AT5G06130.2	1.4e-04	35.82	chaperone protein dnaJ-related	[more]
AT5G03870.1	6.8e-04	29.41	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 165..262
None	No IPR available	PANTHER	PTHR15852:SF56	PROTEIN PHOTOSYSTEM I ASSEMBLY 2, CHLOROPLASTIC	coord: 165..262
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 178..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000378.1	Spg000378.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0047134	protein-disulfide reductase (NAD(P)) activity