Spg000348 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg000348
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTrichome birefringence-like family
Locationscaffold8: 42402813 .. 42407706 (+)
RNA-Seq ExpressionSpg000348
SyntenySpg000348
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCTTTTACTCCAAAAAGGAAAAGGAAAAAAAAAAACCCAAAAAGAAACAGAAAACAAAAACCTGTACAGGGGATCGGAACCCAAGAACAGAACAATGGGTTTCTTATTCCGAGCTGCCTTTCTTCTTCTTCTCTTCCTCCACCAAACAAATGCCCAAATTTCCAACAATACCCTCGCCGGAAACCTCGCCGGAAAATGCAACCTGTTCCACGGCAAGTGGGTTTTCGACGCTTCTTACCCTCTCTACGACTCTTCCACTTGCCCCTTTGTAGATCCACAGTTCAATTGCCAGAAGTACGGCCGTCCCGACAAGTCCTACCTCAAGTATCGCTGGCAGCCCTTCGCCTGCGCTCTCCCCAGGTAACAACCGACATGTTGTCCGGCGTACACTAAAAAACAGAGTGTTTGATTTGGGGTTTTTTTGTTTTGATTTGCAGGTTTAATGGGTTGAATTTTCTGGAGAAATGGAGAGGGAAGAAGATAATGTTCGTGGGGGATTCGTTGAGCTTGAACCAGTGGGAGTCATTGGCTTGTATGATTCATTCATGGGTGCCCAATTCCAAGACCTCATTTGTTAGAAGAGATGGTCTTTCTTCTGTCACTTTTCAGGTAAATCAACGACAACCAAAAAATAAAAAGTTTAAAAACTTCGTTCTTCTTCTTTTTTCTTGTTGTTCTTGTTAAATTTTGTGTTTTGATTTGAGAGTTTTGTGTGTTGAATCGGGTTTGAATCGTTTTGCTTTTGTTGGTTTGTTTTTGTCTCCATTAAGTATGGGTTTTAACAGGACGGTCCTCTTTTTTTGACCATTCACTCTGCTCTGCTCGCACACGATTAAAACAACTTTTTTTTTTTTTTTTCTCTCTTTCTTTTTAAATTTTTTATGATTTTTCTTTTTAAACGCTTAAACTGTTTTATCCATATTTTTAAAGTGTTACTGTTCATATATTTATATATGGATTTTCCTGTCCGTCAGATTTTTTCTTTTAATAAAAGAGTTATATTAAATTTTATCTTAAATATATACATATAGGTTAAATTATTAAAAATGCATATGAACTATGAGATTTGTTTCAATTTTACTCTTGAACTTTCAAAAATTTCATTTTAACCCTTTGAAATTTGAAGTTTGTTTCAAATAACCATTGGAGATATTTTCCATTAAATTTATAGACAAAAAGTCAATGTATTTGTATATATTTGTATTGTTTTTTTTCCAAGTATGTGTTGAAATCTATTTACATAAGTAACAATTCATATCCAAACACATCAATTTTTCGTTCGTGAATTTGACAAAAATAAAAGATCCTTTTAAAAACAAACTTCTAACTTCAAAAGCTAAAACGAAACTTTTAAAAGTTCTAGGTATAATTGAAACCAAGTCCTTTAATAATTAAACTTTCATATATATATATATATATAAATTTATGAATCATAAGCATCCAAAACCAACTGTAAAAGTACTCAAATCTAGTCACAAAATTAAGTGGTTTAAAAAGGCCTTGACTTTTTTTTCTTTTTCTTTTTTGAAGCAAGACATTTTCTCTGTTTTTAGAAGATTAAAGCCCTTAAAGTAAATCAATACCCAAAACACAACTGTGATCAATTACAAGTGACTACAGCTAATTATAATTTAATATATATATAGAAAAGTTATTAATTTCAATATTCATTTTGAGTATTTGGACCAATTCAATAACATTTTTTTGAAGAAAAAAAAAAAAGTTTGTCCAATTCAATTAATGTGTCATGAGTGAAAAATAAAAAATTTCCTCCAAAAATAATGAAAATTTAATAAATGGGATTCACTTTTTGAAATGTGTTGGTGAGCGTACAGAATCAGTGAAAGTGGGAGCGTGATTGGCGGTTGCAAACATGTGATCCTCTTCAATCTTCATTCCCTAAATTAATTTATGTTTTTTTATTTTTAAATCCTTCATAACTTTGGAATTTTGAATTTTACTTCTTTTTTAATAACTCAAATTTATTTAAAATGCCTAATTTCTTTTCTTACTGTATTTAATAATATTTATTGTCTTTTTCTTAAAGATTAGCATTGTTTTGTTAGGAATAATAAGGGTCATTATACTTTTTCATATGGTCCCCTTGATGCCCACCAAACCACTAAATGTATATTATATGGTCTAAATTCAATTGTCTTTATTACTGTGGCAAAAAAAAAAAAAAAAAAAGTATGCTTTTAGGTAACTAATAAATAATTCAACCACTACCTTTGAAAGAATAATTGAAGTGAATGTTTAATTGGTAAGTAAATATTCTAACTCGGTATTTATTTTGGATTTGAACCTATTCCTTCAAAGTTTCTTTATTATTTTCATATCCTTCAATTCTTAGGCCGAGTCATAGTATTTATTTCTTAGCTTAAGTTTAAATAGAGGTGTATTTGTTTCGTCTTTTAATGTTGTGTTTATTTGATTTTTATGCTCAAAAAATGCTGTGAACATGCTTTTGAAATTTTAATTTTATGTATAATAAGTTTTTACCTTTAAAGCTTATGCCATTAAACATAGTAAAATTAGTTTGTTACATAATTGTTAAATTACCATAAAACATTAAAGACTTGTTAAACATAAAATTAAAAGTTTAGGTCCTGTTTCCTAATCATTTGGTATTTAGTTTTCGAAAATTAAGCTTATAAATACTATTTCCTCATGAATTTTTTTGTTTTGTTATCTATCTACTTTTAGAGATGTTTTCAAACCCAAACCAAATTTTGAATTTTTTTTTTAAAACCTCCTCTTGTTTTTGGAATTTGACTAAGAGTTTTAAGGTGGAAGAGCATAGTAGAGAAATGGATAGATAACAAATACAATTGTCAAAAACAAAAAATGAAAAACGAAGGCTCAGTTTGATAACTACTTGGTTTTTGAAAATTATGCTTGTTTTCTCCAATTTTCTTACTATGGTTTTCATTTTAGTTAAGTCCAGATTTGAATTCCTGACCAAAAAGTAGAATGAAAGGTAAGAAGGAATTGAAGCGTTTTTGTGTACGTTGTGGTGACACTATAGGACTACGGAGTAGAGCTATGGCTATACCGAACGCCATACCTGGTGGACATGGTGAACGAGAAGATGGGGCGAGTTTTGAAGCTGGAGTCTATCCAGAGCGGCAACGCCTGGAGAGGAATGGACATGCTCGTCTTCAACACTTGGCATTGGTGGACTCACACCGGCAGCTCTCAGCCGTAAGCTCATTTGCCTGCCAGCCTTAGCTTGTTCGGTTCTTGTATGTATTCTGAGTTGTTATGTCGGTTCTTGTAAGCTTTTTCCATGGCAATTGGCATATATATGCAGATGGGATTACATTCAAGATGGGAACAGAGTGGTGAAGGATATGAACCGGTATGTCGCGTATTACAAAGGCCTCACCACGTGGGCCAGATGGGTCAATCTCAACGTTGATCCTTCCAAAACTAAAGTCTTCTTCCTCGGCATCTCTCCCACTCATTACATGTATGTCACACTCACACTCCACTCTCTTTCATCCATAATACTTCCTCTTTTTTCCAAAATTATGCTTATAAATACTACTACTTTTACTTAACTAAGAGAGAATGCTAAAAAATTATCACAAAAATATTGCTGAAAATGAATTTGGTATCAATTAGGGTCTAAATTATAAATTTGGTTTCCATTGTTAGACCATAGTTTCAATCTAGTTTTTATACCTTAAATATGTTATAATTTGATATGTTTTAAGTTTAGTTTCGATTTATTTGTTATAAGTTCCCTGTTTGATAATTATTTGGTTTTTGAGTTTTGAAAATTATGCTTTATTCTTCCTATTTTTCTACCATGGTTATCATCTTTGTTAAAACACATTTGAATTTTTAGTCAAATTTCAAACATAACTTATTTTAAGTTCTTAAAACTTCACTTAGTTTTTGGAAACATGGAAAGAAGTAGATAACAAAACAAACAAACTTATAAGCGGAAGTAGTATTCATAAAGCTTCATTTACAAAAAATCAAATAGATATCAAACAGAGCCTTAGTTAATCTTCACAAATCAACACTACTAGTAATACCAAATTGCAAGTTTTGATTTTACTCGGCAATAAGCTAGTTTTTTTTTCTTTTTGTCTATGTTATTCAACCATATCAAAGGTTAAAAGATGATTAAAAGATACAAGGAAACAAGTTAATTTTTTTGGATGGGTAAAACATAATTTAGAGGTAAAATTTAACCAAATCAGCACAACTTAAACCTTTTTTTTTTAAATCTTAAAAGTAAAAATGAATTTAAAACCGGTAAATCTATAGCGATGAATTTTATAATTTGACCTAAATTGAAAATGGGCTGTCACTTACACGGAAGAAGAACGAATTTCAGTGGCAGAGACTGGAGCGAGCCGGCGAAGTCGTGCTCCGGCGAGACGGAGCCGTACTTCGGAGCGAGGTATCCGGCGGGGACGCCGATGGCGTGGGTGGTGGTGAACAAAGTCCTGAGCAGGATCAAGAAGCCCGTCGTATTCCTCGACGTGACGACTCTGTCTCAGTACCGGAAGGACGGGCACCCCTCCGCCTACAGCGGCGATCACAGCGGCACCGATTGCAGCCACTGGTGCCTTCCTGGTTTGCCCGATACCTGGAACGAGCTCTTGTATGCAGATCTCTTTGGGTAAATGTTCTTTCAACCAAAATTCACAGATTTGTGTTTGTTTTTGAAGAAGAAGAATAAGGATTAGAAATTATATTGGTGAATTAATTTCGTGGTGATTAATTTAATTGTAATTGTACATTCCATTGTTGTAAGGGTAAGCTCAAAGTCTGGTTTGAGTTTTCACAAGGAATTGGATTTGGGAATTTAGATAACACCATCAATTTACTTTCAATATTATTTGGGAAAGATAAACTCATTTTTCTGCCTCTTC

mRNA sequence

ATGGGTTTCTTATTCCGAGCTGCCTTTCTTCTTCTTCTCTTCCTCCACCAAACAAATGCCCAAATTTCCAACAATACCCTCGCCGGAAACCTCGCCGGAAAATGCAACCTGTTCCACGGCAAGTGGGTTTTCGACGCTTCTTACCCTCTCTACGACTCTTCCACTTGCCCCTTTGTAGATCCACAGTTCAATTGCCAGAAGTACGGCCGTCCCGACAAGTCCTACCTCAAGTATCGCTGGCAGCCCTTCGCCTGCGCTCTCCCCAGGTTTAATGGGTTGAATTTTCTGGAGAAATGGAGAGGGAAGAAGATAATGTTCGTGGGGGATTCGTTGAGCTTGAACCAGTGGGAGTCATTGGCTTGA

Coding sequence (CDS)

ATGGGTTTCTTATTCCGAGCTGCCTTTCTTCTTCTTCTCTTCCTCCACCAAACAAATGCCCAAATTTCCAACAATACCCTCGCCGGAAACCTCGCCGGAAAATGCAACCTGTTCCACGGCAAGTGGGTTTTCGACGCTTCTTACCCTCTCTACGACTCTTCCACTTGCCCCTTTGTAGATCCACAGTTCAATTGCCAGAAGTACGGCCGTCCCGACAAGTCCTACCTCAAGTATCGCTGGCAGCCCTTCGCCTGCGCTCTCCCCAGGTTTAATGGGTTGAATTTTCTGGAGAAATGGAGAGGGAAGAAGATAATGTTCGTGGGGGATTCGTTGAGCTTGAACCAGTGGGAGTCATTGGCTTGA

Protein sequence

MGFLFRAAFLLLLFLHQTNAQISNNTLAGNLAGKCNLFHGKWVFDASYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQWESLA
Homology
[Close]
BLAST of Spg000348 vs. NCBI nr
Match: XP_038900997.1 (protein trichome birefringence-like 39 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 3.8e-57
Identity = 109/127 (85.83%), Postives = 114/127 (89.76%), Query Frame = 0 

Query: 1   MGFLFRAAFLLL----LFLHQTNAQISNNTL---AGNLAGKCNLFHGKWVFDASYPLYDS 60
           MGFLF AA ++L    LFLHQTNAQISNNTL   AGNLAGKCNL+ GKWV D+SYPLYDS
Sbjct: 4   MGFLFAAALVVLSIFSLFLHQTNAQISNNTLTSVAGNLAGKCNLYQGKWVLDSSYPLYDS 63

Query: 61  STCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSL 120
           STCPFVDPQFNCQKYGRPDKSYLKYRWQPF C +PRFNGLNFLEKWRGKKIMFVGDSLSL
Sbjct: 64  STCPFVDPQFNCQKYGRPDKSYLKYRWQPFGCGIPRFNGLNFLEKWRGKKIMFVGDSLSL 123

[Close]
BLAST of Spg000348 vs. NCBI nr
Match: XP_022944103.1 (protein trichome birefringence-like 39 [Cucurbita moschata])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 107/124 (86.29%), Postives = 112/124 (90.32%), Query Frame = 0 

Query: 1   MGFLFRAAFLLL-LFLHQTNAQISNNTL---AGNLAGKCNLFHGKWVFDASYPLYDSSTC 60
           MGFLF AA L L +FLHQTNAQISN TL   AGNLAG CNL+ GKWVFD+SYPLYD+STC
Sbjct: 1   MGFLFPAAILALSIFLHQTNAQISNTTLDAVAGNLAGSCNLYQGKWVFDSSYPLYDASTC 60

Query: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQW 120
           PFVDPQFNCQKYGRPDKSYLKYRWQP ACALPRFNG+ FLEKWRGKKIMFVGDSLSLNQW
Sbjct: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPTACALPRFNGVRFLEKWRGKKIMFVGDSLSLNQW 120

[Close]
BLAST of Spg000348 vs. NCBI nr
Match: XP_023512589.1 (protein trichome birefringence-like 39 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 107/124 (86.29%), Postives = 112/124 (90.32%), Query Frame = 0 

Query: 1   MGFLFRAAFLLL-LFLHQTNAQISNNTL---AGNLAGKCNLFHGKWVFDASYPLYDSSTC 60
           MGFLF AA L L +FLHQTNAQISN TL   AGNLAG CNL+ GKWVFD+SYPLYD+STC
Sbjct: 1   MGFLFPAAILALSIFLHQTNAQISNTTLAAVAGNLAGSCNLYQGKWVFDSSYPLYDASTC 60

Query: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQW 120
           PFVDPQFNCQKYGRPDKSYLKYRWQP ACALPRFNG+ FLEKWRGKKIMFVGDSLSLNQW
Sbjct: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPSACALPRFNGVRFLEKWRGKKIMFVGDSLSLNQW 120

[Close]
BLAST of Spg000348 vs. NCBI nr
Match: XP_022986000.1 (protein trichome birefringence-like 39 [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 3.6e-55
Identity = 106/124 (85.48%), Postives = 112/124 (90.32%), Query Frame = 0 

Query: 1   MGFLFRAAFLLL-LFLHQTNAQISNNTL---AGNLAGKCNLFHGKWVFDASYPLYDSSTC 60
           MGFLF AA L L +FLHQTNAQI+N TL   AGNLAG CNL+ GKWVFD+SYPLYD+STC
Sbjct: 1   MGFLFPAAILALSIFLHQTNAQITNTTLAAVAGNLAGSCNLYQGKWVFDSSYPLYDASTC 60

Query: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQW 120
           PFVDPQFNCQKYGRPDKSYLKYRWQP ACALPRFNG+ FLEKWRGKKIMFVGDSLSLNQW
Sbjct: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPSACALPRFNGVRFLEKWRGKKIMFVGDSLSLNQW 120

[Close]
BLAST of Spg000348 vs. NCBI nr
Match: KAG6570539.1 (Protein trichome birefringence-like 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 106/124 (85.48%), Postives = 112/124 (90.32%), Query Frame = 0 

Query: 1   MGFLFRAAFLLL-LFLHQTNAQISNNTL---AGNLAGKCNLFHGKWVFDASYPLYDSSTC 60
           MGFLF AA L L +FLHQTNAQISN TL   AGNLAG CNL+ GKWVFD+SYPLYD++TC
Sbjct: 1   MGFLFPAAILALSIFLHQTNAQISNTTLDAVAGNLAGSCNLYQGKWVFDSSYPLYDATTC 60

Query: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQW 120
           PFVDPQFNCQKYGRPDKSYLKYRWQP ACALPRFNG+ FLEKWRGKKIMFVGDSLSLNQW
Sbjct: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPTACALPRFNGVWFLEKWRGKKIMFVGDSLSLNQW 120

[Close]
BLAST of Spg000348 vs. ExPASy Swiss-Prot
Match: Q9SIN2 (Protein trichome birefringence-like 39 OS=Arabidopsis thaliana OX=3702 GN=TBL39 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 7.1e-38
Identity = 75/132 (56.82%), Postives = 90/132 (68.18%), Query Frame = 0 

Query: 1   MGFLFRA--AFLLLLFLHQTNAQIS---NNTLAGN-------LAGKCNLFHGKWVFDASY 60
           MGF  R   +FL   F     + +S   N+T + N        +G+CN F G WV+D  Y
Sbjct: 1   MGFTSRGNPSFLFFFFFFLCLSTVSAYINSTSSNNDEVRRELASGRCNWFRGNWVYDVKY 60

Query: 61  PLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVG 120
           PLYD   CPF+DPQFNC+KYGRPD +YLKYRWQP +C+LPRFNGL FL + RGKKIMFVG
Sbjct: 61  PLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRRMRGKKIMFVG 120

[Close]
BLAST of Spg000348 vs. ExPASy Swiss-Prot
Match: O22960 (Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 PE=2 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 4.6e-37
Identity = 63/86 (73.26%), Postives = 75/86 (87.21%), Query Frame = 0 

Query: 35  CNLFHGKWVFDASYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLN 94
           CNLF G+WVFDASYP YDSSTCPF+D +F+C K+GRPDK +LKY WQP +C +PRF+G  
Sbjct: 65  CNLFQGRWVFDASYPFYDSSTCPFIDGEFDCLKFGRPDKQFLKYSWQPDSCTVPRFDGEA 124

Query: 95  FLEKWRGKKIMFVGDSLSLNQWESLA 121
           FL+KWRGK++MFVGDSLSLN WESLA
Sbjct: 125 FLKKWRGKRVMFVGDSLSLNMWESLA 150

[Close]
BLAST of Spg000348 vs. ExPASy Swiss-Prot
Match: Q8VY22 (Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-35
Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 0 

Query: 32  AGKCNLFHGKWVFDASYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFN 91
           A  CNLF G+WVFDASYP YDSS CPF+D +F+C K+GRPDK +LKY WQP +C +PRF+
Sbjct: 58  ASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQPESCTIPRFD 117

Query: 92  GLNFLEKWRGKKIMFVGDSLSLNQWESLA 121
           G  FL K+RGK++MFVGDSLSLN WESLA
Sbjct: 118 GGAFLRKYRGKRVMFVGDSLSLNMWESLA 146

[Close]
BLAST of Spg000348 vs. ExPASy Swiss-Prot
Match: Q6DR10 (Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.1e-34
Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 0 

Query: 10  LLLLFLHQTNAQISNNTLAGNLAGK-CNLFHGKWVFDASYPLYDSSTCPFVDPQFNCQKY 69
           ++L+ L Q  +  +N +  G    K CN++ G WV+D SYPLYDS  CPF++ QFNC+  
Sbjct: 17  MILVLLKQIESASANGSSLGLPPRKFCNIYQGSWVYDKSYPLYDSKNCPFIERQFNCKSN 76

Query: 70  GRPDKSYLKYRWQPFACALPRFNGLNFLEK-WRGKKIMFVGDSLSLNQWESL 120
           GRPD  YLKYRWQP  C LPRFNGL+FL +  +GKK+MFVGDSLSLNQW+SL
Sbjct: 77  GRPDSEYLKYRWQPSGCNLPRFNGLDFLGRIMKGKKLMFVGDSLSLNQWQSL 128

[Close]
BLAST of Spg000348 vs. ExPASy Swiss-Prot
Match: Q67XC4 (Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 PE=2 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33
Identity = 68/122 (55.74%), Postives = 88/122 (72.13%), Query Frame = 0 

Query: 1   MGFLFRAAFLLLLFLHQTNAQISNNT--LAGNLAGKCNLFHGKWVFDASYPLYDSSTCPF 60
           +  +  ++F  LL   Q +    NNT  L+G   G+CNL  GKWV+D+SYPLY + +CPF
Sbjct: 12  LSLILFSSFPGLLAQSQQHFLGQNNTSLLSG---GRCNLARGKWVYDSSYPLYSAFSCPF 71

Query: 61  VDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQWES 120
           +D +FNCQK GRPD +Y  +RWQPF+C LPRF+G NF+ + RGKKIM VGDSLSLN +ES
Sbjct: 72  IDSEFNCQKAGRPDTNYQHFRWQPFSCPLPRFDGANFMRRMRGKKIMMVGDSLSLNMFES 130

[Close]
BLAST of Spg000348 vs. ExPASy TrEMBL
Match: A0A6J1FXP7 (protein trichome birefringence-like 39 OS=Cucurbita moschata OX=3662 GN=LOC111448647 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 7.8e-56
Identity = 107/124 (86.29%), Postives = 112/124 (90.32%), Query Frame = 0 

Query: 1   MGFLFRAAFLLL-LFLHQTNAQISNNTL---AGNLAGKCNLFHGKWVFDASYPLYDSSTC 60
           MGFLF AA L L +FLHQTNAQISN TL   AGNLAG CNL+ GKWVFD+SYPLYD+STC
Sbjct: 1   MGFLFPAAILALSIFLHQTNAQISNTTLDAVAGNLAGSCNLYQGKWVFDSSYPLYDASTC 60

Query: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQW 120
           PFVDPQFNCQKYGRPDKSYLKYRWQP ACALPRFNG+ FLEKWRGKKIMFVGDSLSLNQW
Sbjct: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPTACALPRFNGVRFLEKWRGKKIMFVGDSLSLNQW 120

[Close]
BLAST of Spg000348 vs. ExPASy TrEMBL
Match: A0A6J1JCU6 (protein trichome birefringence-like 39 OS=Cucurbita maxima OX=3661 GN=LOC111483865 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.7e-55
Identity = 106/124 (85.48%), Postives = 112/124 (90.32%), Query Frame = 0 

Query: 1   MGFLFRAAFLLL-LFLHQTNAQISNNTL---AGNLAGKCNLFHGKWVFDASYPLYDSSTC 60
           MGFLF AA L L +FLHQTNAQI+N TL   AGNLAG CNL+ GKWVFD+SYPLYD+STC
Sbjct: 1   MGFLFPAAILALSIFLHQTNAQITNTTLAAVAGNLAGSCNLYQGKWVFDSSYPLYDASTC 60

Query: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQW 120
           PFVDPQFNCQKYGRPDKSYLKYRWQP ACALPRFNG+ FLEKWRGKKIMFVGDSLSLNQW
Sbjct: 61  PFVDPQFNCQKYGRPDKSYLKYRWQPSACALPRFNGVRFLEKWRGKKIMFVGDSLSLNQW 120

[Close]
BLAST of Spg000348 vs. ExPASy TrEMBL
Match: A0A6J1D7Y2 (protein trichome birefringence-like 39 OS=Momordica charantia OX=3673 GN=LOC111018100 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53
Identity = 103/122 (84.43%), Postives = 109/122 (89.34%), Query Frame = 0 

Query: 3   FLFRAAF---LLLLFLHQTNAQISNNT-LAGNLAGKCNLFHGKWVFDASYPLYDSSTCPF 62
           FLFRAAF   LL +   QT AQISN++  AG +AGKCN+F GKWVFDASYPLYDSSTCPF
Sbjct: 5   FLFRAAFAVLLLCVLFLQTQAQISNSSWAAGKVAGKCNVFQGKWVFDASYPLYDSSTCPF 64

Query: 63  VDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQWES 121
           VDPQFNCQKYGRPDKSYLKYRWQP +CALPRFNGLNFLEKWRGKKIMFVGDSLSLNQWES
Sbjct: 65  VDPQFNCQKYGRPDKSYLKYRWQPLSCALPRFNGLNFLEKWRGKKIMFVGDSLSLNQWES 124

[Close]
BLAST of Spg000348 vs. ExPASy TrEMBL
Match: A0A5A7UHG2 (Protein trichome birefringence-like 37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00430 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51
Identity = 104/134 (77.61%), Postives = 109/134 (81.34%), Query Frame = 0 

Query: 1   MGFLFRAA---------FLLLLFL---HQTNAQIS--NNTLAGNLAGKCNLFHGKWVFDA 60
           MGF F  A          LLLLFL   H+TNAQ S  NNTL+   A KCNL+ GKWVFD+
Sbjct: 4   MGFCFSLALLPSPPTFLLLLLLFLGHFHRTNAQFSNNNNTLSSLAARKCNLYQGKWVFDS 63

Query: 61  SYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMF 120
           SYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFAC +PRFNGLNFLEKWRGKKIMF
Sbjct: 64  SYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACGIPRFNGLNFLEKWRGKKIMF 123

[Close]
BLAST of Spg000348 vs. ExPASy TrEMBL
Match: A0A0A0KEH7 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G227020 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51
Identity = 99/116 (85.34%), Postives = 103/116 (88.79%), Query Frame = 0 

Query: 10  LLLLFL---HQTNAQIS--NNTLAGNLAGKCNLFHGKWVFDASYPLYDSSTCPFVDPQFN 69
           LLLLFL   H TNAQ S  NNTL+   AG CNL+ GKWVFD+SYPLYDSSTCPFVDPQFN
Sbjct: 22  LLLLFLGHFHYTNAQFSNNNNTLSSLAAGNCNLYQGKWVFDSSYPLYDSSTCPFVDPQFN 81

Query: 70  CQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQWESLA 121
           CQKYGRPDKSYLKYRWQPFAC +PRFNGLNFLEKWRGKKIMFVGDSLSLNQWESLA
Sbjct: 82  CQKYGRPDKSYLKYRWQPFACGIPRFNGLNFLEKWRGKKIMFVGDSLSLNQWESLA 137

[Close]
BLAST of Spg000348 vs. TAIR 10
Match: AT2G42570.1 (TRICHOME BIREFRINGENCE-LIKE 39 )

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-39
Identity = 75/132 (56.82%), Postives = 90/132 (68.18%), Query Frame = 0 

Query: 1   MGFLFRA--AFLLLLFLHQTNAQIS---NNTLAGN-------LAGKCNLFHGKWVFDASY 60
           MGF  R   +FL   F     + +S   N+T + N        +G+CN F G WV+D  Y
Sbjct: 1   MGFTSRGNPSFLFFFFFFLCLSTVSAYINSTSSNNDEVRRELASGRCNWFRGNWVYDVKY 60

Query: 61  PLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVG 120
           PLYD   CPF+DPQFNC+KYGRPD +YLKYRWQP +C+LPRFNGL FL + RGKKIMFVG
Sbjct: 61  PLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRRMRGKKIMFVG 120

[Close]
BLAST of Spg000348 vs. TAIR 10
Match: AT2G34070.1 (TRICHOME BIREFRINGENCE-LIKE 37 )

HSP 1 Score: 155.2 bits (391), Expect = 3.3e-38
Identity = 63/86 (73.26%), Postives = 75/86 (87.21%), Query Frame = 0 

Query: 35  CNLFHGKWVFDASYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLN 94
           CNLF G+WVFDASYP YDSSTCPF+D +F+C K+GRPDK +LKY WQP +C +PRF+G  
Sbjct: 65  CNLFQGRWVFDASYPFYDSSTCPFIDGEFDCLKFGRPDKQFLKYSWQPDSCTVPRFDGEA 124

Query: 95  FLEKWRGKKIMFVGDSLSLNQWESLA 121
           FL+KWRGK++MFVGDSLSLN WESLA
Sbjct: 125 FLKKWRGKRVMFVGDSLSLNMWESLA 150

[Close]
BLAST of Spg000348 vs. TAIR 10
Match: AT1G29050.1 (TRICHOME BIREFRINGENCE-LIKE 38 )

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-36
Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 0 

Query: 32  AGKCNLFHGKWVFDASYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACALPRFN 91
           A  CNLF G+WVFDASYP YDSS CPF+D +F+C K+GRPDK +LKY WQP +C +PRF+
Sbjct: 58  ASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQPESCTIPRFD 117

Query: 92  GLNFLEKWRGKKIMFVGDSLSLNQWESLA 121
           G  FL K+RGK++MFVGDSLSLN WESLA
Sbjct: 118 GGAFLRKYRGKRVMFVGDSLSLNMWESLA 146

[Close]
BLAST of Spg000348 vs. TAIR 10
Match: AT2G30900.1 (TRICHOME BIREFRINGENCE-LIKE 43 )

HSP 1 Score: 144.4 bits (363), Expect = 5.8e-35
Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 0 

Query: 10  LLLLFLHQTNAQISNNTLAGNLAGK-CNLFHGKWVFDASYPLYDSSTCPFVDPQFNCQKY 69
           ++L+ L Q  +  +N +  G    K CN++ G WV+D SYPLYDS  CPF++ QFNC+  
Sbjct: 17  MILVLLKQIESASANGSSLGLPPRKFCNIYQGSWVYDKSYPLYDSKNCPFIERQFNCKSN 76

Query: 70  GRPDKSYLKYRWQPFACALPRFNGLNFLEK-WRGKKIMFVGDSLSLNQWESL 120
           GRPD  YLKYRWQP  C LPRFNGL+FL +  +GKK+MFVGDSLSLNQW+SL
Sbjct: 77  GRPDSEYLKYRWQPSGCNLPRFNGLDFLGRIMKGKKLMFVGDSLSLNQWQSL 128

[Close]
BLAST of Spg000348 vs. TAIR 10
Match: AT2G31110.2 (Plant protein of unknown function (DUF828) )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 68/122 (55.74%), Postives = 88/122 (72.13%), Query Frame = 0 

Query: 1   MGFLFRAAFLLLLFLHQTNAQISNNT--LAGNLAGKCNLFHGKWVFDASYPLYDSSTCPF 60
           +  +  ++F  LL   Q +    NNT  L+G   G+CNL  GKWV+D+SYPLY + +CPF
Sbjct: 12  LSLILFSSFPGLLAQSQQHFLGQNNTSLLSG---GRCNLARGKWVYDSSYPLYSAFSCPF 71

Query: 61  VDPQFNCQKYGRPDKSYLKYRWQPFACALPRFNGLNFLEKWRGKKIMFVGDSLSLNQWES 120
           +D +FNCQK GRPD +Y  +RWQPF+C LPRF+G NF+ + RGKKIM VGDSLSLN +ES
Sbjct: 72  IDSEFNCQKAGRPDTNYQHFRWQPFSCPLPRFDGANFMRRMRGKKIMMVGDSLSLNMFES 130

The following BLAST results are available for this feature:
BLAST of Spg000348 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900997.13.8e-5785.83protein trichome birefringence-like 39 [Benincasa hispida][more]
XP_022944103.11.6e-5586.29protein trichome birefringence-like 39 [Cucurbita moschata][more]
XP_023512589.11.6e-5586.29protein trichome birefringence-like 39 [Cucurbita pepo subsp. pepo][more]
XP_022986000.13.6e-5585.48protein trichome birefringence-like 39 [Cucurbita maxima][more]
KAG6570539.11.0e-5485.48Protein trichome birefringence-like 39, partial [Cucurbita argyrosperma subsp. s... [more]
BLAST of Spg000348 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIN27.1e-3856.82Protein trichome birefringence-like 39 OS=Arabidopsis thaliana OX=3702 GN=TBL39 ... [more]
O229604.6e-3773.26Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 ... [more]
Q8VY221.5e-3569.66Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 ... [more]
Q6DR108.1e-3458.04Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 ... [more]
Q67XC41.8e-3355.74Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 ... [more]
BLAST of Spg000348 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FXP77.8e-5686.29protein trichome birefringence-like 39 OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1JCU61.7e-5585.48protein trichome birefringence-like 39 OS=Cucurbita maxima OX=3661 GN=LOC1114838... [more]
A0A6J1D7Y24.7e-5384.43protein trichome birefringence-like 39 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A5A7UHG21.5e-5177.61Protein trichome birefringence-like 37 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0KEH71.5e-5185.34PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G227020 PE=3 ... [more]
BLAST of Spg000348 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42570.15.0e-3956.82TRICHOME BIREFRINGENCE-LIKE 39 [more]
AT2G34070.13.3e-3873.26TRICHOME BIREFRINGENCE-LIKE 37 [more]
AT1G29050.11.1e-3669.66TRICHOME BIREFRINGENCE-LIKE 38 [more]
AT2G30900.15.8e-3558.04TRICHOME BIREFRINGENCE-LIKE 43 [more]
AT2G31110.21.3e-3455.74Plant protein of unknown function (DUF828) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026057PC-EsterasePFAMPF13839PC-Esterasecoord: 87..119
e-value: 2.2E-13
score: 50.6
IPR025846PMR5 N-terminal domainPFAMPF14416PMR5Ncoord: 34..85
e-value: 2.7E-25
score: 88.4
IPR029962Trichome birefringence-like familyPANTHERPTHR32285PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATEDcoord: 24..120
NoneNo IPR availablePANTHERPTHR32285:SF71PROTEIN TRICHOME BIREFRINGENCE-LIKE 39coord: 24..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg000348.1Spg000348.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0016413 O-acetyltransferase activity