Spg000176 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATGAAGCGAACCCCGAAGGAGGGTGAGTCGAAGGGATTGGGTCGTCTCGGCCCACTCGTGTGGGCCGAGTCTTCTCCCCTTCGCTCGATCTCTGGTGCCCCTAGATGCCCCGGTTCCACCTAGTTCAACCCAAATCGTCTCCGAAAGCCTAGAAACCCTAAGGCAGGAAAATGTATTTAAACTCTTCTCGTCACTGAAGAAGGGATCCCGAAACTATTTCTTTGAACTTTACTTCTCTTGCTCTCATGCTCTCCTCCTTCAGCTTTCTGACTTAAGCATCGGAGGTGGTGTGACAAGTACCACACTGGTATGCAGGTTTCTTCTATCTTGTCGGCCACGTCTTCCCCCTCTTAAAAAATATTCACGGTTGGTGTCACGTGAAGGTCAGGTGAGTCCTGCCTGTCCAAATTTGACCATCAACAACTATAATTATTAAAAAAAAAAAAAAAACAATCTAAACTTCACTATTCTTATTAAAAATAATACAATATATTATTGCTATATATTATTATAATGGAGTCAAAGAATCAAACATTTTGGCGTTCTGTGGTTCATGAATTAGAATGATGTTGAAAATTCCACCATATATTTGTCTAATACAATATTTAGCTTTACTTATCTAAATTATTAAGCCAACTGATCTGTGTTATACTCCAATAAAATTATGTTAGTTTTTGAAAGATTGCAACTATTTTTTCACCATAAACAATTAAGTTTCGCAAAATCTAAAATATACATCAAATACATAGGTTAAGCAAACTCAATTTTTTTTAGATACATCTTTTTTTATAAATTCAAACAAAAATCACACAAATTCAGACTTGTTAATTTAAACTCGCTTATAATGAATAAGAAAAAGGAGTTTGTTGGAAGGGTGATTTTATTAGGAGATAAATTTCAGTCAAACGTTTTTCTTTGAGTTTTCAATAATTCCACGTGATAATTAAAGAGACGCTTTGGCTTGACTATTCAATTTACGCCAACAACGTAACCTTCACAATTTCCTCCAAATATTTATATATAACTTCATCCTTTCTCCTTTCTCCAAAACTCTCTCTCTCTCTCCCTTTCTGTCTCAGCAGATTTTATCATCTTGGCCATGGGCAATTGTACGAGCAACAAATATTTGGCAGATACAATGCCGATGAGCGACGACGACGAGGAGGCGTCGGCGGAGACGGTGAAGAGGAGGCTGATCGACAACGGAGCTCGGAAAACTTCGATGGGAACGACGGAGTTGAAGATCAGAATCACGAAGAGAGAGCTGGAGAAGTTATTGAGCCAAGTGGATGTGGAGGAGCTGCCGGTGACGGAGCTGTTATCGCAGTTAATCGACCTTGGCGACGCATTTGAGAGTACTCACCGGCGATCATGGCGGCCTTCTTTGCACAGCATTCCTGAGGTCAATTGA ATGATCATGAAGCGAACCCCGAAGGAGGATGCCCCGGTTCCACCTAGTTCAACCCAAATCGTCTCCGAAAGCCTAGAAACCCTAAGGCAGGAAAATGTATTTAAACTCTTCTCGTCACTGAAGAAGGGATCCCGAAACTATTTCTTTGAACTTTACTTCTCTTGCTCTCATGCTCTCCTCCTTCAGCTTTCTGACTTAAGCATCGGAGGTGGTGTGACAAGTACCACACTGGTATGCAGCAACAAATATTTGGCAGATACAATGCCGATGAGCGACGACGACGAGGAGGCGTCGGCGGAGACGGTGAAGAGGAGGCTGATCGACAACGGAGCTCGGAAAACTTCGATGGGAACGACGGAGTTGAAGATCAGAATCACGAAGAGAGAGCTGGAGAAGTTATTGAGCCAAGTGGATGTGGAGGAGCTGCCGGTGACGGAGCTGTTATCGCAGTTAATCGACCTTGGCGACGCATTTGAGAGTACTCACCGGCGATCATGGCGGCCTTCTTTGCACAGCATTCCTGAGGTCAATTGA ATGATCATGAAGCGAACCCCGAAGGAGGATGCCCCGGTTCCACCTAGTTCAACCCAAATCGTCTCCGAAAGCCTAGAAACCCTAAGGCAGGAAAATGTATTTAAACTCTTCTCGTCACTGAAGAAGGGATCCCGAAACTATTTCTTTGAACTTTACTTCTCTTGCTCTCATGCTCTCCTCCTTCAGCTTTCTGACTTAAGCATCGGAGGTGGTGTGACAAGTACCACACTGGTATGCAGCAACAAATATTTGGCAGATACAATGCCGATGAGCGACGACGACGAGGAGGCGTCGGCGGAGACGGTGAAGAGGAGGCTGATCGACAACGGAGCTCGGAAAACTTCGATGGGAACGACGGAGTTGAAGATCAGAATCACGAAGAGAGAGCTGGAGAAGTTATTGAGCCAAGTGGATGTGGAGGAGCTGCCGGTGACGGAGCTGTTATCGCAGTTAATCGACCTTGGCGACGCATTTGAGAGTACTCACCGGCGATCATGGCGGCCTTCTTTGCACAGCATTCCTGAGGTCAATTGA MIMKRTPKEDAPVPPSSTQIVSESLETLRQENVFKLFSSLKKGSRNYFFELYFSCSHALLLQLSDLSIGGGVTSTTLVCSNKYLADTMPMSDDDEEASAETVKRRLIDNGARKTSMGTTELKIRITKRELEKLLSQVDVEELPVTELLSQLIDLGDAFESTHRRSWRPSLHSIPEVN Homology
BLAST of Spg000176 vs. NCBI nr
Match: XP_038904231.1 (uncharacterized protein LOC120090574 [Benincasa hispida]) HSP 1 Score: 150.2 bits (378), Expect = 1.7e-32 Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Spg000176 vs. NCBI nr
Match: XP_031739098.1 (uncharacterized protein LOC116402843 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 2.5e-28 Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of Spg000176 vs. NCBI nr
Match: XP_008463409.1 (PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo] >TYK02554.1 DUF4228 domain protein [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 9.4e-28 Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Spg000176 vs. NCBI nr
Match: XP_022151029.1 (uncharacterized protein LOC111019048 [Momordica charantia]) HSP 1 Score: 127.5 bits (319), Expect = 1.2e-25 Identity = 75/104 (72.12%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of Spg000176 vs. NCBI nr
Match: XP_022985276.1 (uncharacterized protein LOC111483315 [Cucurbita maxima]) HSP 1 Score: 126.3 bits (316), Expect = 2.6e-25 Identity = 71/102 (69.61%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of Spg000176 vs. ExPASy TrEMBL
Match: A0A0A0L2D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076560 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-28 Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of Spg000176 vs. ExPASy TrEMBL
Match: A0A5D3BTQ9 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00050 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 4.6e-28 Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Spg000176 vs. ExPASy TrEMBL
Match: A0A1S3CJ77 (uncharacterized protein LOC103501580 OS=Cucumis melo OX=3656 GN=LOC103501580 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 4.6e-28 Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Spg000176 vs. ExPASy TrEMBL
Match: A0A6J1DBT0 (uncharacterized protein LOC111019048 OS=Momordica charantia OX=3673 GN=LOC111019048 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 5.6e-26 Identity = 75/104 (72.12%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of Spg000176 vs. ExPASy TrEMBL
Match: A0A6J1J7P7 (uncharacterized protein LOC111483315 OS=Cucurbita maxima OX=3661 GN=LOC111483315 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25 Identity = 71/102 (69.61%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of Spg000176 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06 Identity = 33/94 (35.11%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of Spg000176 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ) HSP 1 Score: 48.5 bits (114), Expect = 6.3e-06 Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of Spg000176 vs. TAIR 10
Match: AT3G10120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04 Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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