Spg000041 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000041
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein NARROW LEAF 1-like isoform X3
Location	scaffold1: 407908 .. 409151 (-)
RNA-Seq Expression	Spg000041
Synteny	Spg000041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACTGGATTCGGCATGCCCCTTTCTCTCTCCTGCATTTGCTCGGTTACATTGTCCATTGCATTCTTCTCTCCAAGCTTCACTCTTCTCCTCTTTTTCTTTTTGGTTGTCTTCCAGGTCACTTGTAATTGATTGTACTTGAAAGTTCTCAAATTATGAAAGCTTGAAGATGCATAGGTTTTGTGAACAAGTCACACAACTGATGAGTTTCAGCAATATTCGACTTGATATAATCGCACGCGCATGACATATTGTTTTCTCATCTTGCACAGCCGGTTTTATTAGAAGCATGAATTGTGAAAGTTGGAAACTTTGGACTTGTCGTATTATCTTCTTTTCTGTCTTATTCGAGCTTCCTGCCTTGTATTATGATTTTTAATTCTCGAATATAATTCTGTAATGGTCTGCATTTAGTTGAATTGGAGGTTAAATTTGTTTGGATATATGCACGTGGCTTAGTTCTTAGAGTATTTCCCTTTCCCTATGTTCTGTTATCATAGTTGAATGTATTTTTATGTGCAATGGCATCATCTTCTCAGACCCCTTGAATCTTAAATGGAGCAGAACTATTCTCTCTCTCTCTTCCCCCCAAACCGTTGCGCGCACACACACGACACACATTTATATGTAGTTTGGTATGTAAATTCACTTTAGAGGACTTGATGGAATGAATTTTAATTTCTAAGAGACCTTAAATTCTTCTCTCATAGTCATTGGAGAGCTGAAAGATGGACAGGACAAGGCTGGATTTAAGTTTTCATCATTCAGTGTCAACACAATCAAGAGGAATCTGCCTTGGACTTGGAAAGGAACTATTGCAGTCATCTTAATCTACCTTCACAGTCCTCACCTAGTCAATGCTTTGCTCCAGTATCAGCTGTCTGAGACCAACGCTGCTTACTTTTCATGGCCCACTTCCAGCCGTTTAAAACGACGCTGCAGAAGATAGAGCAAACTATTTTGGGAACCTTCAGAAAGGAGTGCTTCCTGAAATTTGGGCCGGCTGCCCACTGGGGCAGCGAGCTACTACTTTGCTTGAGCTAATGACCATAAGGGCATATTTCATAGCAAGATCTTGCGTCGTTTTAGCCTTGAACTGCAATAGGATTTCGAATCCAGAAGGGTATGTTGACAGATATCCCTGCTATTATTGTCTTGTTGCGCGCAAAGTTCACAGGCAGGTGGCTCATGATGTTCAATGTCTACCTGCTGCACTTGAGTTGGAAACTCGTCATACCTGA

mRNA sequence

atgggtactggattcggcatgcccctttctctctcctgcatttgctcggttacattgtccattgcattcttctctccaagcttcactcttctcctctttttctttttggttgtcttccagAAAGGAGTGCTTCCTGAAATTTGGGCCGGCTGCCCACTGGGGCAGCGAGCTACTACTTTGCTTGAGCTAATGACCATAAGGGCATATTTCATAGCAAGATCTTGCGTCGTTTTAGCCTTGAACTGCAATAGGATTTCGAATCCAGAAGGGTATGTTGACAGATATCCCTGCTATTATTGTCTTGTTGCGCGCAAAGTTCACAGGCAGGTGGCTCATGATGTTCAATGTCTACCTGCTGCACTTGAGTTGGAAACTCGTCATACCTGA

Coding sequence (CDS)

ATGGGTACTGGATTCGGCATGCCCCTTTCTCTCTCCTGCATTTGCTCGGTTACATTGTCCATTGCATTCTTCTCTCCAAGCTTCACTCTTCTCCTCTTTTTCTTTTTGGTTGTCTTCCAGAAAGGAGTGCTTCCTGAAATTTGGGCCGGCTGCCCACTGGGGCAGCGAGCTACTACTTTGCTTGAGCTAATGACCATAAGGGCATATTTCATAGCAAGATCTTGCGTCGTTTTAGCCTTGAACTGCAATAGGATTTCGAATCCAGAAGGGTATGTTGACAGATATCCCTGCTATTATTGTCTTGTTGCGCGCAAAGTTCACAGGCAGGTGGCTCATGATGTTCAATGTCTACCTGCTGCACTTGAGTTGGAAACTCGTCATACCTGA

Protein sequence

MGTGFGMPLSLSCICSVTLSIAFFSPSFTLLLFFFLVVFQKGVLPEIWAGCPLGQRATTLLELMTIRAYFIARSCVVLALNCNRISNPEGYVDRYPCYYCLVARKVHRQVAHDVQCLPAALELETRHT

Homology

[Close]

BLAST of Spg000041 vs. NCBI nr
Match: KAG6594381.1 (Protein NARROW LEAF 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 126 QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 185

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 186 AILVFVARKVHRQWLNDVQCLPAALE 208

[Close]

BLAST of Spg000041 vs. NCBI nr
Match: XP_022926808.1 (uncharacterized protein LOC111433816 isoform X2 [Cucurbita moschata] >XP_022926809.1 uncharacterized protein LOC111433816 isoform X2 [Cucurbita moschata] >XP_022926810.1 uncharacterized protein LOC111433816 isoform X2 [Cucurbita moschata] >XP_022926811.1 uncharacterized protein LOC111433816 isoform X2 [Cucurbita moschata])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 83  QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 142

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 143 AILVFVARKVHRQWLNDVQCLPAALE 165

[Close]

BLAST of Spg000041 vs. NCBI nr
Match: XP_023003438.1 (uncharacterized protein LOC111497052 isoform X1 [Cucurbita maxima])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 101 QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 160

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 161 AILVFVARKVHRQWLNDVQCLPAALE 183

[Close]

BLAST of Spg000041 vs. NCBI nr
Match: XP_023003439.1 (uncharacterized protein LOC111497052 isoform X2 [Cucurbita maxima] >XP_023003440.1 uncharacterized protein LOC111497052 isoform X2 [Cucurbita maxima] >XP_023003441.1 uncharacterized protein LOC111497052 isoform X2 [Cucurbita maxima] >XP_023003442.1 uncharacterized protein LOC111497052 isoform X2 [Cucurbita maxima])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 83  QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 142

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 143 AILVFVARKVHRQWLNDVQCLPAALE 165

[Close]

BLAST of Spg000041 vs. NCBI nr
Match: XP_023517560.1 (uncharacterized protein LOC111781287 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 83  QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 142

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 143 AILVFVARKVHRQWLNDVQCLPAALE 165

[Close]

BLAST of Spg000041 vs. ExPASy Swiss-Prot
Match: B4XT64 (Protein NARROW LEAF 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NAL1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-06
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKG+LP      P GQ+A +LL+LMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 74  QKGLLPRHPGRLPKGQQANSLLDLMTIRAFHSKILRRFSLGTAVGF-RIR--KGDLTDIP 133

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVH++  +  QCLPA LE
Sbjct: 134 AILVFVARKVHKKWLNPAQCLPAILE 156

[Close]

BLAST of Spg000041 vs. ExPASy TrEMBL
Match: A0A6J1KRS1 (uncharacterized protein LOC111497052 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497052 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 83  QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 142

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 143 AILVFVARKVHRQWLNDVQCLPAALE 165

[Close]

BLAST of Spg000041 vs. ExPASy TrEMBL
Match: A0A6J1EG76 (uncharacterized protein LOC111433816 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433816 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 83  QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 142

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 143 AILVFVARKVHRQWLNDVQCLPAALE 165

[Close]

BLAST of Spg000041 vs. ExPASy TrEMBL
Match: A0A6J1KWI0 (uncharacterized protein LOC111497052 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497052 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 101 QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 160

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 161 AILVFVARKVHRQWLNDVQCLPAALE 183

[Close]

BLAST of Spg000041 vs. ExPASy TrEMBL
Match: A0A6J1EFE4 (uncharacterized protein LOC111433816 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433816 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 101 QKGVLPEILGRLPTGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 160

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 161 AILVFVARKVHRQWLNDVQCLPAALE 183

[Close]

BLAST of Spg000041 vs. ExPASy TrEMBL
Match: A0A6J1CZZ3 (uncharacterized protein LOC111015756 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015756 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-10
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPEI    P GQRATTLLELMTIRA+    + R  +  A+   RI   +G +   P
Sbjct: 83  QKGVLPEILGRLPSGQRATTLLELMTIRAFHSKILRRFSLGTAIGF-RIQ--KGMLTDIP 142

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  +DVQCLPAALE
Sbjct: 143 AIIVFVARKVHRQWLNDVQCLPAALE 165

[Close]

BLAST of Spg000041 vs. TAIR 10
Match: AT2G35155.1 (Trypsin family protein )

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-12
Identity = 44/86 (51.16%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAY---FIARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPE     P GQ+ATTLLELMTIRA+    + R  +  A+   RIS   G +   P
Sbjct: 86  QKGVLPETVGRLPSGQQATTLLELMTIRAFHSKILRRFSLGTAVGF-RIS--RGVLTNVP 145

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVHRQ  + +QCLP+ALE
Sbjct: 146 AILVFVARKVHRQWLNPMQCLPSALE 168

[Close]

BLAST of Spg000041 vs. TAIR 10
Match: AT5G45030.1 (Trypsin family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAYF---IARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPE + G P G++ATTLLELM IRA+    + R  +  A+   RI    G +    
Sbjct: 84  QKGVLPESFDGLPTGKKATTLLELMMIRAFHSKNLRRFSLGTAIGF-RIR--RGVLTNIA 143

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVH+Q  + +QCLP ALE
Sbjct: 144 AILVFVARKVHKQWLNPLQCLPTALE 166

[Close]

BLAST of Spg000041 vs. TAIR 10
Match: AT5G45030.2 (Trypsin family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 40  QKGVLPEIWAGCPLGQRATTLLELMTIRAYF---IARSCVVLALNCNRISNPEGYVDRYP 99
           QKGVLPE + G P G++ATTLLELM IRA+    + R  +  A+   RI    G +    
Sbjct: 84  QKGVLPESFDGLPTGKKATTLLELMMIRAFHSKNLRRFSLGTAIGF-RIR--RGVLTNIA 143

Query: 100 CYYCLVARKVHRQVAHDVQCLPAALE 123
                VARKVH+Q  + +QCLP ALE
Sbjct: 144 AILVFVARKVHKQWLNPLQCLPTALE 166

[Close]

BLAST of Spg000041 vs. TAIR 10
Match: AT3G12950.1 (Trypsin family protein )

HSP 1 Score: 54.7 bits (130), Expect = 6.4e-08
Identity = 37/86 (43.02%), Postives = 44/86 (51.16%), Query Frame = 0


Query: 43  VLPEIWAGCPLGQRATTLLELMTIRAYFIARSCVVLALNCNRISNPEGYVDR------YP 102
           V PE  +  P GQRATTLLELMTIRA+          L C  +    G+  R       P
Sbjct: 51  VSPEPVSTEPKGQRATTLLELMTIRAFHSK------MLRCYSLGTAIGFRIRRGVLTDIP 110

Query: 103 CYYCLVARKVHRQVAHDVQCLPAALE 123
                V+RKVH+Q    +QCLP ALE
Sbjct: 111 AIIVFVSRKVHKQWLSPLQCLPTALE 130

The following BLAST results are available for this feature:

BLAST of Spg000041 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594381.1	2.2e-10	55.81	Protein NARROW LEAF 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022926808.1	2.2e-10	55.81	uncharacterized protein LOC111433816 isoform X2 [Cucurbita moschata] >XP_0229268...	[more]
XP_023003438.1	2.2e-10	55.81	uncharacterized protein LOC111497052 isoform X1 [Cucurbita maxima]	[more]
XP_023003439.1	2.2e-10	55.81	uncharacterized protein LOC111497052 isoform X2 [Cucurbita maxima] >XP_023003440...	[more]
XP_023517560.1	2.2e-10	55.81	uncharacterized protein LOC111781287 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg000041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B4XT64	3.4e-06	41.86	Protein NARROW LEAF 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NAL1 PE=1 SV=1	[more]

BLAST of Spg000041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KRS1	1.1e-10	55.81	uncharacterized protein LOC111497052 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EG76	1.1e-10	55.81	uncharacterized protein LOC111433816 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KWI0	1.1e-10	55.81	uncharacterized protein LOC111497052 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EFE4	1.1e-10	55.81	uncharacterized protein LOC111433816 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CZZ3	1.4e-10	55.81	uncharacterized protein LOC111015756 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg000041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35155.1	4.3e-12	51.16	Trypsin family protein	[more]
AT5G45030.1	3.1e-10	46.51	Trypsin family protein	[more]
AT5G45030.2	3.1e-10	46.51	Trypsin family protein	[more]
AT3G12950.1	6.4e-08	43.02	Trypsin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31521:SF6	BNAA05G08780D PROTEIN	coord: 37..122
None	No IPR available	PANTHER	PTHR31521	EXPRESSED PROTEIN	coord: 37..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000041.1	Spg000041.1	mRNA