Sgr030516 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr030516
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationtig00154107: 1154806 .. 1155544 (+)
RNA-Seq ExpressionSgr030516
SyntenySgr030516
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTGCCTTCGTCCCTTCAACACATCAGCCCAACCTTATCCGCGAAAAACCCCCCAGCGACGGCCAACAGAAGCAGCTCAAGCTCATCTCCACCGCACACATGTCTGGCATTGCTTGACAGTTGCTCCACCTTATCAGAACTCAAGCAAATTCATGCCCAACTCTTGAGGACTGGCCTTTTCTTCGACGCATTCACCGCTAGCAAAATCGTGGCCTTCTCTTCTCTTGATGACACAGGGAGCCTCCATTACGCTTGCAGAGTTTTCTCCCAAATCTCCAACCCCACGCCTTTTACTTGCAATTCCATCATTCGTGGCTTTACTAACAAGAATTTGCCTCGCGACGCCGTTCTTTTCTATCGACAAATGGTTGTCGACGGTCTTCTCCCCGACAGGTTCACGTTCCCATCTTTGTTCAAGGCCACTAAAGATTTAGCCGTAGGGAAAGAGTTGCACTGTCACTCGACAAAGCTCGGGTTCGCTTCAGATTCTTATTTCAGAACACTTTGATGTCTATGCATTCAAACTGTGGGTGTTTAGTTTCAGCTCAGAAGGTGTTCGACAAAATGCTAGATACAAGCGTGGTTTCTTGGGCAACATGGTTGGTGCTTATGCACAGTGGGATCAACCACAGAAGGCCATTGAGCTTTTTGAGATGATGGAGGTTGAGGACGTGAAAGCCAATGAGGTTGCTTGGTTAACGTTTCGACTGCTTGTGCCATGGCAAGGGATTTGA

mRNA sequence

ATGGCGGTGCCTTCGTCCCTTCAACACATCAGCCCAACCTTATCCGCGAAAAACCCCCCAGCGACGGCCAACAGAAGCAGCTCAAGCTCATCTCCACCGCACACATGTCTGGCATTGCTTGACAGTTGCTCCACCTTATCAGAACTCAAGCAAATTCATGCCCAACTCTTGAGGACTGGCCTTTTCTTCGACGCATTCACCGCTAGCAAAATCGTGGCCTTCTCTTCTCTTGATGACACAGGGAGCCTCCATTACGCTTGCAGAGTTTTCTCCCAAATCTCCAACCCCACGCCTTTTACTTGCAATTCCATCATTCGTGGCTTTACTAACAAGAATTTGCCTCGCGACGCCGTTCTTTTCTATCGACAAATGGTTGTCGACGGTCTTCTCCCCGACAGGTTCACGTTCCCATCTTTGTTCAAGGCCACTAAAGATTTAGCCGTAGGGAAAGAGTTGCACTGTCACTCGACAAAGCTCGGTTTCAGCTCAGAAGGTGTTCGACAAAATGCTAGATACAAGCGTGGTTTCTTGGGCAACATGGTTGGTGCTTATGCACAGTGGGATCAACCACAGAAGGCCATTGAGCTTTTTGAGATGATGGAGGTTGAGGACGTGAAAGCCAATGAGGTTGCTTGGTTAACGTTTCGACTGCTTGTGCCATGGCAAGGGATTTGA

Coding sequence (CDS)

ATGGCGGTGCCTTCGTCCCTTCAACACATCAGCCCAACCTTATCCGCGAAAAACCCCCCAGCGACGGCCAACAGAAGCAGCTCAAGCTCATCTCCACCGCACACATGTCTGGCATTGCTTGACAGTTGCTCCACCTTATCAGAACTCAAGCAAATTCATGCCCAACTCTTGAGGACTGGCCTTTTCTTCGACGCATTCACCGCTAGCAAAATCGTGGCCTTCTCTTCTCTTGATGACACAGGGAGCCTCCATTACGCTTGCAGAGTTTTCTCCCAAATCTCCAACCCCACGCCTTTTACTTGCAATTCCATCATTCGTGGCTTTACTAACAAGAATTTGCCTCGCGACGCCGTTCTTTTCTATCGACAAATGGTTGTCGACGGTCTTCTCCCCGACAGGTTCACGTTCCCATCTTTGTTCAAGGCCACTAAAGATTTAGCCGTAGGGAAAGAGTTGCACTGTCACTCGACAAAGCTCGGTTTCAGCTCAGAAGGTGTTCGACAAAATGCTAGATACAAGCGTGGTTTCTTGGGCAACATGGTTGGTGCTTATGCACAGTGGGATCAACCACAGAAGGCCATTGAGCTTTTTGAGATGATGGAGGTTGAGGACGTGAAAGCCAATGAGGTTGCTTGGTTAACGTTTCGACTGCTTGTGCCATGGCAAGGGATTTGA

Protein sequence

MAVPSSLQHISPTLSAKNPPATANRSSSSSSPPHTCLALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFSSEGVRQNARYKRGFLGNMVGAYAQWDQPQKAIELFEMMEVEDVKANEVAWLTFRLLVPWQGI
Homology
BLAST of Sgr030516 vs. NCBI nr
Match: XP_034225178.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus dulcis] >XP_034225201.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus dulcis] >VVA10669.1 PREDICTED: pentatricopeptide [Prunus dulcis] >VVA41861.1 PREDICTED: pentatricopeptide [Prunus dulcis])

HSP 1 Score: 245.4 bits (625), Expect = 4.8e-61
Identity = 137/250 (54.80%), Postives = 166/250 (66.40%), Query Frame = 0

Query: 1   MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI              PT S   A  P  TA ++S ++SP  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRTNSPIEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRTGLFFDAFTASK+VAFSSL+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSSLEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF+
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFA 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARNVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240

BLAST of Sgr030516 vs. NCBI nr
Match: XP_023897242.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Quercus suber] >XP_023908430.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Quercus suber])

HSP 1 Score: 243.0 bits (619), Expect = 2.4e-60
Identity = 133/245 (54.29%), Postives = 166/245 (67.76%), Query Frame = 0

Query: 1   MAVPSSLQHISPTLSAKNP----------PATANRSS--SSSSPPHTCLALLDSCSTLSE 60
           MA P SL ++ P LS++NP           AT N+S+  ++S+ PH CL  L++CS + E
Sbjct: 1   MAAPLSLNYLRPPLSSENPLPKNPTIITAIATENKSNIINNSTQPHPCLVSLENCSNMKE 60

Query: 61  LKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGF 120
           LKQIHAQ+LRTGLFFDA+TAS+IVAF +L  +G+LHYA    +QI+NPT FTCNSIIRG+
Sbjct: 61  LKQIHAQMLRTGLFFDAYTASRIVAFCALQQSGNLHYARLALTQIANPTTFTCNSIIRGY 120

Query: 121 TNKNLPRDAVLFYRQMVVDGL-LPDRFTFPSLFKATKDLAVGKELHCHSTKLGFSSEGVR 180
           TNKN PRDAVLFYR+M+  GL +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF+S+   
Sbjct: 121 TNKNSPRDAVLFYREMITQGLVVPDRFTFPSLFKSCVDLREGKQLHCHSTKLGFASDTYI 180

Query: 181 QNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMMEVEDV 211
           QN         G L                    M+GAY QWDQP +AI+LF+ ME+E  
Sbjct: 181 QNTLMNMYSHCGCLVSAHKVFDKMVDKCVVSWATMIGAYTQWDQPGEAIKLFDRMEIEGA 240

BLAST of Sgr030516 vs. NCBI nr
Match: PQQ20229.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora])

HSP 1 Score: 243.0 bits (619), Expect = 2.4e-60
Identity = 134/250 (53.60%), Postives = 166/250 (66.40%), Query Frame = 0

Query: 1   MAVPSSLQHISPTLSAKNP-----PAT-----------ANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI    S+ NP     P+T           A ++S +S+P  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPSTSTAIAAAPITNATKTSRTSNPIEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF 
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAQWDQPIEAVKLFDKM 240

BLAST of Sgr030516 vs. NCBI nr
Match: XP_021817716.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X1 [Prunus avium] >XP_021817717.1 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X2 [Prunus avium])

HSP 1 Score: 241.1 bits (614), Expect = 9.1e-60
Identity = 134/250 (53.60%), Postives = 164/250 (65.60%), Query Frame = 0

Query: 1   MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI              PT S   A  P  TA ++S +++P  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAATPITTATKTSRTNNPIEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF 
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYA WDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAHWDQPIEAVKLFDKM 240

BLAST of Sgr030516 vs. NCBI nr
Match: XP_008242743.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus mume])

HSP 1 Score: 240.4 bits (612), Expect = 1.5e-59
Identity = 135/250 (54.00%), Postives = 164/250 (65.60%), Query Frame = 0

Query: 1   MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI              PT S   A  P  TA ++S  ++P  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRINNPVEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF 
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240

BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.8e-22
Identity = 75/240 (31.25%), Postives = 117/240 (48.75%), Query Frame = 0

Query: 1   MAVPSSLQHIS----PTLSAKNPPATANRSSSSSSPPHTCLALLDSCSTLSELKQIHAQL 60
           MA+ S+ Q +S    P  S  N P T N  S         ++L++ C +L +LKQ H  +
Sbjct: 1   MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRH-------ISLIERCVSLRQLKQTHGHM 60

Query: 61  LRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRD 120
           +RTG F D ++ASK+ A ++L    SL YA +VF +I  P  F  N++IR + +   P  
Sbjct: 61  IRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVL 120

Query: 121 AVLFYRQMVVDG-LLPDRFTFPSLFKATKD---LAVGKELHCHSTKLGFSSEGVRQNARY 180
           ++  +  MV +    P+++TFP L KA  +   L++G+ LH  + K    S+    N+  
Sbjct: 121 SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI 180

Query: 181 KRGF----------------------LGNMVGAYAQWDQPQKAIELFEMMEVEDVKANEV 211
              F                        +M+  + Q   P KA+ELF+ ME EDVKA+ V
Sbjct: 181 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 233

BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-21
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 0

Query: 37  LALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNP 96
           L+LL+ C  L  LKQI AQ++  GL  D F +S+++AF +L ++  L Y+ ++   I NP
Sbjct: 57  LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116

Query: 97  TPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLL---PDRFTFPSLFKATKDLAVGK--- 156
             F+ N  IRGF+    P+++ L Y+QM+  G     PD FT+P LFK   DL +     
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176

Query: 157 -----------EL--HCHSTKLG-FSSEGVRQNAR--YKRGFLGNMV------GAYAQWD 214
                      EL  H H+  +  F+S G  +NAR  +    + ++V        Y +  
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236

BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.6e-21
Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 0

Query: 38  ALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPT 97
           +L+DS +  ++LKQIHA+LL  GL F  F  +K++  SS    G + +A +VF  +  P 
Sbjct: 26  SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQ 85

Query: 98  PFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLA---VGKELHC 157
            F  N+IIRG++  N  +DA+L Y  M +  + PD FTFP L KA   L+   +G+ +H 
Sbjct: 86  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 145

Query: 158 HSTKLGFSSEGVRQN------ARYKRGFLGN--------------------MVGAYAQWD 212
              +LGF ++   QN      A+ +R  LG+                    +V AYAQ  
Sbjct: 146 QVFRLGFDADVFVQNGLIALYAKCRR--LGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 205

BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.6e-20
Identity = 78/242 (32.23%), Postives = 109/242 (45.04%), Query Frame = 0

Query: 34  HTCLALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDD-----TGSLHYACR 93
           H  LALL SCS+ S+LK IH  LLRT L  D F AS+++A    D      T  L YA  
Sbjct: 13  HPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72

Query: 94  VFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDL-- 153
           +FSQI NP  F  N +IR F+    P  A  FY QM+   + PD  TFP L KA+ ++  
Sbjct: 73  IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132

Query: 154 -AVGKELHCHSTKLGFSSE----------------------------------------- 213
             VG++ H    + GF ++                                         
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192

Query: 214 ----GVRQNAR-------YKRGFLGN-MVGAYAQWDQPQKAIELFEMMEVEDVKANEVAW 215
               G+ +NAR       ++  F  + M+  YA+ +  +KAI+LFE M+ E V ANE   
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252

BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 0

Query: 10  ISPTLSAKNPPATANRSSSSSSPPHTCLALLDS-CSTLSELKQIHAQLLRTGLFFDAFTA 69
           +SPT+ + +        SS S   +T L L+D+ CST+ ELKQIHA L++TGL  D  TA
Sbjct: 1   MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA 60

Query: 70  SKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVD- 129
           S+++AF     +  ++YA  VF++I++  PF  N+IIRGF+  + P  A+  +  M+   
Sbjct: 61  SRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSS 120

Query: 130 -GLLPDRFTFPSLFKATKDLAV---GKELHCHSTKLGFSSEGVRQN 170
             + P R T+PS+FKA   L     G++LH    K G   +   +N
Sbjct: 121 PSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN 165

BLAST of Sgr030516 vs. ExPASy TrEMBL
Match: A0A5E4GQU3 (PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B006710 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 137/250 (54.80%), Postives = 166/250 (66.40%), Query Frame = 0

Query: 1   MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI              PT S   A  P  TA ++S ++SP  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRTNSPIEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRTGLFFDAFTASK+VAFSSL+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSSLEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF+
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFA 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARNVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240

BLAST of Sgr030516 vs. ExPASy TrEMBL
Match: A0A314ZLN2 (Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_15875 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.2e-60
Identity = 134/250 (53.60%), Postives = 166/250 (66.40%), Query Frame = 0

Query: 1   MAVPSSLQHISPTLSAKNP-----PAT-----------ANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI    S+ NP     P+T           A ++S +S+P  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPSTSTAIAAAPITNATKTSRTSNPIEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF 
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAQWDQPIEAVKLFDKM 240

BLAST of Sgr030516 vs. ExPASy TrEMBL
Match: A0A6P5SU63 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X1 OS=Prunus avium OX=42229 GN=LOC110759883 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.4e-60
Identity = 134/250 (53.60%), Postives = 164/250 (65.60%), Query Frame = 0

Query: 1   MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI              PT S   A  P  TA ++S +++P  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAATPITTATKTSRTNNPIEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF 
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYA WDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAHWDQPIEAVKLFDKM 240

BLAST of Sgr030516 vs. ExPASy TrEMBL
Match: M5VTK1 (DYW_deaminase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G236200 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.8e-59
Identity = 135/250 (54.00%), Postives = 163/250 (65.20%), Query Frame = 0

Query: 1   MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
           MA P SL HI              PT S   A  P  TA ++S +SSP  PH CLALLD 
Sbjct: 1   MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRTSSPIEPHPCLALLDK 60

Query: 61  CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
           CST+SELKQIHAQLLRT LFFDAFTASK+VAFSSL+ +GSLHYA  V +QI NPT +TCN
Sbjct: 61  CSTMSELKQIHAQLLRTSLFFDAFTASKVVAFSSLEGSGSLHYARLVLTQIPNPTTYTCN 120

Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
           S+IRG+TNK+LP +A+ FY++M++ G +PDRFTFPSLFK+  DL  GK+LHCHSTKLGF+
Sbjct: 121 SVIRGYTNKDLPCEAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFA 180

Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
           S+   QN         G L                    M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARNVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240

BLAST of Sgr030516 vs. ExPASy TrEMBL
Match: A0A6P4BGB8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107431685 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 5.4e-58
Identity = 134/254 (52.76%), Postives = 163/254 (64.17%), Query Frame = 0

Query: 1   MAVPSSLQHISPTLSA-----KNPPA--------------TANRSSSSSS---PPHTCLA 60
           MA P S+ HI P LS+     KNP +              TAN  ++++     PH CLA
Sbjct: 1   MAAPLSVHHIRPPLSSDNSILKNPTSSSTTIAATATTAAFTANSIATTNDHPIHPHPCLA 60

Query: 61  LLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTP 120
           LLD C+ +S+LKQIHAQLLRTGLFFDAFTASKIVAF +L + GSL YA  VF+QISNPT 
Sbjct: 61  LLDKCANVSQLKQIHAQLLRTGLFFDAFTASKIVAFCALQEHGSLRYARLVFTQISNPTT 120

Query: 121 FTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTK 180
           FTCNSIIRG+TN+ LP +A+LFY++M+  GLLPDRFTFPSLFK+  DL  GK+LHCHSTK
Sbjct: 121 FTCNSIIRGYTNRGLPSEAMLFYQEMLFRGLLPDRFTFPSLFKSCGDLREGKQLHCHSTK 180

Query: 181 LGFSSEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIEL 211
            GF+S+   QN         G L                    M+GAYAQWD+P +A+ L
Sbjct: 181 FGFASDSYIQNTMMNMYSTCGCLVSARKVFDKMVEKSVVSWATMIGAYAQWDEPTEAVVL 240

BLAST of Sgr030516 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-23
Identity = 75/240 (31.25%), Postives = 117/240 (48.75%), Query Frame = 0

Query: 1   MAVPSSLQHIS----PTLSAKNPPATANRSSSSSSPPHTCLALLDSCSTLSELKQIHAQL 60
           MA+ S+ Q +S    P  S  N P T N  S         ++L++ C +L +LKQ H  +
Sbjct: 1   MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRH-------ISLIERCVSLRQLKQTHGHM 60

Query: 61  LRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRD 120
           +RTG F D ++ASK+ A ++L    SL YA +VF +I  P  F  N++IR + +   P  
Sbjct: 61  IRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVL 120

Query: 121 AVLFYRQMVVDG-LLPDRFTFPSLFKATKD---LAVGKELHCHSTKLGFSSEGVRQNARY 180
           ++  +  MV +    P+++TFP L KA  +   L++G+ LH  + K    S+    N+  
Sbjct: 121 SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI 180

Query: 181 KRGF----------------------LGNMVGAYAQWDQPQKAIELFEMMEVEDVKANEV 211
              F                        +M+  + Q   P KA+ELF+ ME EDVKA+ V
Sbjct: 181 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 233

BLAST of Sgr030516 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 0

Query: 37  LALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNP 96
           L+LL+ C  L  LKQI AQ++  GL  D F +S+++AF +L ++  L Y+ ++   I NP
Sbjct: 57  LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116

Query: 97  TPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLL---PDRFTFPSLFKATKDLAVGK--- 156
             F+ N  IRGF+    P+++ L Y+QM+  G     PD FT+P LFK   DL +     
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176

Query: 157 -----------EL--HCHSTKLG-FSSEGVRQNAR--YKRGFLGNMV------GAYAQWD 214
                      EL  H H+  +  F+S G  +NAR  +    + ++V        Y +  
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236

BLAST of Sgr030516 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 102.4 bits (254), Expect = 4.7e-22
Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 0

Query: 38  ALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPT 97
           +L+DS +  ++LKQIHA+LL  GL F  F  +K++  SS    G + +A +VF  +  P 
Sbjct: 26  SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQ 85

Query: 98  PFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLA---VGKELHC 157
            F  N+IIRG++  N  +DA+L Y  M +  + PD FTFP L KA   L+   +G+ +H 
Sbjct: 86  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 145

Query: 158 HSTKLGFSSEGVRQN------ARYKRGFLGN--------------------MVGAYAQWD 212
              +LGF ++   QN      A+ +R  LG+                    +V AYAQ  
Sbjct: 146 QVFRLGFDADVFVQNGLIALYAKCRR--LGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 205

BLAST of Sgr030516 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 4.0e-21
Identity = 78/242 (32.23%), Postives = 109/242 (45.04%), Query Frame = 0

Query: 34  HTCLALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDD-----TGSLHYACR 93
           H  LALL SCS+ S+LK IH  LLRT L  D F AS+++A    D      T  L YA  
Sbjct: 13  HPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72

Query: 94  VFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDL-- 153
           +FSQI NP  F  N +IR F+    P  A  FY QM+   + PD  TFP L KA+ ++  
Sbjct: 73  IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132

Query: 154 -AVGKELHCHSTKLGFSSE----------------------------------------- 213
             VG++ H    + GF ++                                         
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192

Query: 214 ----GVRQNAR-------YKRGFLGN-MVGAYAQWDQPQKAIELFEMMEVEDVKANEVAW 215
               G+ +NAR       ++  F  + M+  YA+ +  +KAI+LFE M+ E V ANE   
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252

BLAST of Sgr030516 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 0

Query: 10  ISPTLSAKNPPATANRSSSSSSPPHTCLALLDS-CSTLSELKQIHAQLLRTGLFFDAFTA 69
           +SPT+ + +        SS S   +T L L+D+ CST+ ELKQIHA L++TGL  D  TA
Sbjct: 1   MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA 60

Query: 70  SKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVD- 129
           S+++AF     +  ++YA  VF++I++  PF  N+IIRGF+  + P  A+  +  M+   
Sbjct: 61  SRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSS 120

Query: 130 -GLLPDRFTFPSLFKATKDLAV---GKELHCHSTKLGFSSEGVRQN 170
             + P R T+PS+FKA   L     G++LH    K G   +   +N
Sbjct: 121 PSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_034225178.14.8e-6154.80pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunu... [more]
XP_023897242.12.4e-6054.29pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Querc... [more]
PQQ20229.12.4e-6053.60pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora][more]
XP_021817716.19.1e-6053.60pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isofor... [more]
XP_008242743.11.5e-5954.00PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... [more]
Match NameE-valueIdentityDescription
O823807.8e-2231.25Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9SJZ32.3e-2132.68Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q9LTV86.6e-2134.98Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9FG165.6e-2032.23Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Q9SJG61.8e-1836.75Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A5E4GQU32.3e-6154.80PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B006710 PE=3 SV... [more]
A0A314ZLN21.2e-6053.60Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora O... [more]
A0A6P5SU634.4e-6053.60pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isofor... [more]
M5VTK12.8e-5954.00DYW_deaminase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G236... [more]
A0A6P4BGB85.4e-5852.76pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Ziz... [more]
Match NameE-valueIdentityDescription
AT2G29760.15.5e-2331.25Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G22410.11.6e-2232.68SLOW GROWTH 1 [more]
AT3G12770.14.7e-2234.98mitochondrial editing factor 22 [more]
AT5G06540.14.0e-2132.23Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G42920.11.3e-1936.75Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 23..219
e-value: 9.9E-17
score: 62.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 99..132
e-value: 5.9E-6
score: 24.1
coord: 180..208
e-value: 9.5E-4
score: 17.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 179..203
e-value: 0.0022
score: 18.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 98..142
e-value: 5.2E-8
score: 33.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 97..131
score: 9.952918
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 25..170
NoneNo IPR availablePANTHERPTHR47928:SF46SUBFAMILY NOT NAMEDcoord: 25..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr030516.1Sgr030516.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding