Homology
BLAST of Sgr030516 vs. NCBI nr
Match:
XP_034225178.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus dulcis] >XP_034225201.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus dulcis] >VVA10669.1 PREDICTED: pentatricopeptide [Prunus dulcis] >VVA41861.1 PREDICTED: pentatricopeptide [Prunus dulcis])
HSP 1 Score: 245.4 bits (625), Expect = 4.8e-61
Identity = 137/250 (54.80%), Postives = 166/250 (66.40%), Query Frame = 0
Query: 1 MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
MA P SL HI PT S A P TA ++S ++SP PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRTNSPIEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRTGLFFDAFTASK+VAFSSL+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSSLEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF+
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFA 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARNVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240
BLAST of Sgr030516 vs. NCBI nr
Match:
XP_023897242.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Quercus suber] >XP_023908430.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Quercus suber])
HSP 1 Score: 243.0 bits (619), Expect = 2.4e-60
Identity = 133/245 (54.29%), Postives = 166/245 (67.76%), Query Frame = 0
Query: 1 MAVPSSLQHISPTLSAKNP----------PATANRSS--SSSSPPHTCLALLDSCSTLSE 60
MA P SL ++ P LS++NP AT N+S+ ++S+ PH CL L++CS + E
Sbjct: 1 MAAPLSLNYLRPPLSSENPLPKNPTIITAIATENKSNIINNSTQPHPCLVSLENCSNMKE 60
Query: 61 LKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGF 120
LKQIHAQ+LRTGLFFDA+TAS+IVAF +L +G+LHYA +QI+NPT FTCNSIIRG+
Sbjct: 61 LKQIHAQMLRTGLFFDAYTASRIVAFCALQQSGNLHYARLALTQIANPTTFTCNSIIRGY 120
Query: 121 TNKNLPRDAVLFYRQMVVDGL-LPDRFTFPSLFKATKDLAVGKELHCHSTKLGFSSEGVR 180
TNKN PRDAVLFYR+M+ GL +PDRFTFPSLFK+ DL GK+LHCHSTKLGF+S+
Sbjct: 121 TNKNSPRDAVLFYREMITQGLVVPDRFTFPSLFKSCVDLREGKQLHCHSTKLGFASDTYI 180
Query: 181 QNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMMEVEDV 211
QN G L M+GAY QWDQP +AI+LF+ ME+E
Sbjct: 181 QNTLMNMYSHCGCLVSAHKVFDKMVDKCVVSWATMIGAYTQWDQPGEAIKLFDRMEIEGA 240
BLAST of Sgr030516 vs. NCBI nr
Match:
PQQ20229.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora])
HSP 1 Score: 243.0 bits (619), Expect = 2.4e-60
Identity = 134/250 (53.60%), Postives = 166/250 (66.40%), Query Frame = 0
Query: 1 MAVPSSLQHISPTLSAKNP-----PAT-----------ANRSSSSSSP--PHTCLALLDS 60
MA P SL HI S+ NP P+T A ++S +S+P PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPSTSTAIAAAPITNATKTSRTSNPIEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAQWDQPIEAVKLFDKM 240
BLAST of Sgr030516 vs. NCBI nr
Match:
XP_021817716.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X1 [Prunus avium] >XP_021817717.1 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X2 [Prunus avium])
HSP 1 Score: 241.1 bits (614), Expect = 9.1e-60
Identity = 134/250 (53.60%), Postives = 164/250 (65.60%), Query Frame = 0
Query: 1 MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
MA P SL HI PT S A P TA ++S +++P PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAATPITTATKTSRTNNPIEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYA WDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAHWDQPIEAVKLFDKM 240
BLAST of Sgr030516 vs. NCBI nr
Match:
XP_008242743.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus mume])
HSP 1 Score: 240.4 bits (612), Expect = 1.5e-59
Identity = 135/250 (54.00%), Postives = 164/250 (65.60%), Query Frame = 0
Query: 1 MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
MA P SL HI PT S A P TA ++S ++P PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRINNPVEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240
BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 7.8e-22
Identity = 75/240 (31.25%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 1 MAVPSSLQHIS----PTLSAKNPPATANRSSSSSSPPHTCLALLDSCSTLSELKQIHAQL 60
MA+ S+ Q +S P S N P T N S ++L++ C +L +LKQ H +
Sbjct: 1 MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRH-------ISLIERCVSLRQLKQTHGHM 60
Query: 61 LRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRD 120
+RTG F D ++ASK+ A ++L SL YA +VF +I P F N++IR + + P
Sbjct: 61 IRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVL 120
Query: 121 AVLFYRQMVVDG-LLPDRFTFPSLFKATKD---LAVGKELHCHSTKLGFSSEGVRQNARY 180
++ + MV + P+++TFP L KA + L++G+ LH + K S+ N+
Sbjct: 121 SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI 180
Query: 181 KRGF----------------------LGNMVGAYAQWDQPQKAIELFEMMEVEDVKANEV 211
F +M+ + Q P KA+ELF+ ME EDVKA+ V
Sbjct: 181 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 233
BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 2.3e-21
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 0
Query: 37 LALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNP 96
L+LL+ C L LKQI AQ++ GL D F +S+++AF +L ++ L Y+ ++ I NP
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 97 TPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLL---PDRFTFPSLFKATKDLAVGK--- 156
F+ N IRGF+ P+++ L Y+QM+ G PD FT+P LFK DL +
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 157 -----------EL--HCHSTKLG-FSSEGVRQNAR--YKRGFLGNMV------GAYAQWD 214
EL H H+ + F+S G +NAR + + ++V Y +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 6.6e-21
Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 0
Query: 38 ALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPT 97
+L+DS + ++LKQIHA+LL GL F F +K++ SS G + +A +VF + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQ 85
Query: 98 PFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLA---VGKELHC 157
F N+IIRG++ N +DA+L Y M + + PD FTFP L KA L+ +G+ +H
Sbjct: 86 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 145
Query: 158 HSTKLGFSSEGVRQN------ARYKRGFLGN--------------------MVGAYAQWD 212
+LGF ++ QN A+ +R LG+ +V AYAQ
Sbjct: 146 QVFRLGFDADVFVQNGLIALYAKCRR--LGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 205
BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 5.6e-20
Identity = 78/242 (32.23%), Postives = 109/242 (45.04%), Query Frame = 0
Query: 34 HTCLALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDD-----TGSLHYACR 93
H LALL SCS+ S+LK IH LLRT L D F AS+++A D T L YA
Sbjct: 13 HPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 94 VFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDL-- 153
+FSQI NP F N +IR F+ P A FY QM+ + PD TFP L KA+ ++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 154 -AVGKELHCHSTKLGFSSE----------------------------------------- 213
VG++ H + GF ++
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 214 ----GVRQNAR-------YKRGFLGN-MVGAYAQWDQPQKAIELFEMMEVEDVKANEVAW 215
G+ +NAR ++ F + M+ YA+ + +KAI+LFE M+ E V ANE
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
BLAST of Sgr030516 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 0
Query: 10 ISPTLSAKNPPATANRSSSSSSPPHTCLALLDS-CSTLSELKQIHAQLLRTGLFFDAFTA 69
+SPT+ + + SS S +T L L+D+ CST+ ELKQIHA L++TGL D TA
Sbjct: 1 MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA 60
Query: 70 SKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVD- 129
S+++AF + ++YA VF++I++ PF N+IIRGF+ + P A+ + M+
Sbjct: 61 SRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSS 120
Query: 130 -GLLPDRFTFPSLFKATKDLAV---GKELHCHSTKLGFSSEGVRQN 170
+ P R T+PS+FKA L G++LH K G + +N
Sbjct: 121 PSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN 165
BLAST of Sgr030516 vs. ExPASy TrEMBL
Match:
A0A5E4GQU3 (PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B006710 PE=3 SV=1)
HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 137/250 (54.80%), Postives = 166/250 (66.40%), Query Frame = 0
Query: 1 MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
MA P SL HI PT S A P TA ++S ++SP PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRTNSPIEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRTGLFFDAFTASK+VAFSSL+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSSLEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF+
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFA 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARNVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240
BLAST of Sgr030516 vs. ExPASy TrEMBL
Match:
A0A314ZLN2 (Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_15875 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 1.2e-60
Identity = 134/250 (53.60%), Postives = 166/250 (66.40%), Query Frame = 0
Query: 1 MAVPSSLQHISPTLSAKNP-----PAT-----------ANRSSSSSSP--PHTCLALLDS 60
MA P SL HI S+ NP P+T A ++S +S+P PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPSTSTAIAAAPITNATKTSRTSNPIEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAQWDQPIEAVKLFDKM 240
BLAST of Sgr030516 vs. ExPASy TrEMBL
Match:
A0A6P5SU63 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X1 OS=Prunus avium OX=42229 GN=LOC110759883 PE=3 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 4.4e-60
Identity = 134/250 (53.60%), Postives = 164/250 (65.60%), Query Frame = 0
Query: 1 MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
MA P SL HI PT S A P TA ++S +++P PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAATPITTATKTSRTNNPIEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRTGLFFDAFTASK+VAFS+L+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTGLFFDAFTASKVVAFSALEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LPR+A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF
Sbjct: 121 SVIRGYTNKDLPREAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFV 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYA WDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARKVFDKMLEKSVVSWATMIDAYAHWDQPIEAVKLFDKM 240
BLAST of Sgr030516 vs. ExPASy TrEMBL
Match:
M5VTK1 (DYW_deaminase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G236200 PE=3 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 2.8e-59
Identity = 135/250 (54.00%), Postives = 163/250 (65.20%), Query Frame = 0
Query: 1 MAVPSSLQHI-------------SPTLS---AKNPPATANRSSSSSSP--PHTCLALLDS 60
MA P SL HI PT S A P TA ++S +SSP PH CLALLD
Sbjct: 1 MAAPLSLHHIRLPFSSDNPILHNKPTTSTAIAAAPITTATKTSRTSSPIEPHPCLALLDK 60
Query: 61 CSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCN 120
CST+SELKQIHAQLLRT LFFDAFTASK+VAFSSL+ +GSLHYA V +QI NPT +TCN
Sbjct: 61 CSTMSELKQIHAQLLRTSLFFDAFTASKVVAFSSLEGSGSLHYARLVLTQIPNPTTYTCN 120
Query: 121 SIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTKLGFS 180
S+IRG+TNK+LP +A+ FY++M++ G +PDRFTFPSLFK+ DL GK+LHCHSTKLGF+
Sbjct: 121 SVIRGYTNKDLPCEAIFFYQEMIIQGWVPDRFTFPSLFKSCGDLWEGKQLHCHSTKLGFA 180
Query: 181 SEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIELFEMM 211
S+ QN G L M+ AYAQWDQP +A++LF+ M
Sbjct: 181 SDSYIQNTLMNMYSNCGCLISARNVFDKMLEKSVVSWATMIDAYAQWDQPIEALKLFDKM 240
BLAST of Sgr030516 vs. ExPASy TrEMBL
Match:
A0A6P4BGB8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107431685 PE=3 SV=1)
HSP 1 Score: 234.2 bits (596), Expect = 5.4e-58
Identity = 134/254 (52.76%), Postives = 163/254 (64.17%), Query Frame = 0
Query: 1 MAVPSSLQHISPTLSA-----KNPPA--------------TANRSSSSSS---PPHTCLA 60
MA P S+ HI P LS+ KNP + TAN ++++ PH CLA
Sbjct: 1 MAAPLSVHHIRPPLSSDNSILKNPTSSSTTIAATATTAAFTANSIATTNDHPIHPHPCLA 60
Query: 61 LLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTP 120
LLD C+ +S+LKQIHAQLLRTGLFFDAFTASKIVAF +L + GSL YA VF+QISNPT
Sbjct: 61 LLDKCANVSQLKQIHAQLLRTGLFFDAFTASKIVAFCALQEHGSLRYARLVFTQISNPTT 120
Query: 121 FTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLAVGKELHCHSTK 180
FTCNSIIRG+TN+ LP +A+LFY++M+ GLLPDRFTFPSLFK+ DL GK+LHCHSTK
Sbjct: 121 FTCNSIIRGYTNRGLPSEAMLFYQEMLFRGLLPDRFTFPSLFKSCGDLREGKQLHCHSTK 180
Query: 181 LGFSSEGVRQNARYKR----GFL------------------GNMVGAYAQWDQPQKAIEL 211
GF+S+ QN G L M+GAYAQWD+P +A+ L
Sbjct: 181 FGFASDSYIQNTMMNMYSTCGCLVSARKVFDKMVEKSVVSWATMIGAYAQWDEPTEAVVL 240
BLAST of Sgr030516 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 105.5 bits (262), Expect = 5.5e-23
Identity = 75/240 (31.25%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 1 MAVPSSLQHIS----PTLSAKNPPATANRSSSSSSPPHTCLALLDSCSTLSELKQIHAQL 60
MA+ S+ Q +S P S N P T N S ++L++ C +L +LKQ H +
Sbjct: 1 MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRH-------ISLIERCVSLRQLKQTHGHM 60
Query: 61 LRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRD 120
+RTG F D ++ASK+ A ++L SL YA +VF +I P F N++IR + + P
Sbjct: 61 IRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVL 120
Query: 121 AVLFYRQMVVDG-LLPDRFTFPSLFKATKD---LAVGKELHCHSTKLGFSSEGVRQNARY 180
++ + MV + P+++TFP L KA + L++G+ LH + K S+ N+
Sbjct: 121 SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI 180
Query: 181 KRGF----------------------LGNMVGAYAQWDQPQKAIELFEMMEVEDVKANEV 211
F +M+ + Q P KA+ELF+ ME EDVKA+ V
Sbjct: 181 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 233
BLAST of Sgr030516 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 0
Query: 37 LALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNP 96
L+LL+ C L LKQI AQ++ GL D F +S+++AF +L ++ L Y+ ++ I NP
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 97 TPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLL---PDRFTFPSLFKATKDLAVGK--- 156
F+ N IRGF+ P+++ L Y+QM+ G PD FT+P LFK DL +
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 157 -----------EL--HCHSTKLG-FSSEGVRQNAR--YKRGFLGNMV------GAYAQWD 214
EL H H+ + F+S G +NAR + + ++V Y +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
BLAST of Sgr030516 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 102.4 bits (254), Expect = 4.7e-22
Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 0
Query: 38 ALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDDTGSLHYACRVFSQISNPT 97
+L+DS + ++LKQIHA+LL GL F F +K++ SS G + +A +VF + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQ 85
Query: 98 PFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDLA---VGKELHC 157
F N+IIRG++ N +DA+L Y M + + PD FTFP L KA L+ +G+ +H
Sbjct: 86 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 145
Query: 158 HSTKLGFSSEGVRQN------ARYKRGFLGN--------------------MVGAYAQWD 212
+LGF ++ QN A+ +R LG+ +V AYAQ
Sbjct: 146 QVFRLGFDADVFVQNGLIALYAKCRR--LGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 205
BLAST of Sgr030516 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 99.4 bits (246), Expect = 4.0e-21
Identity = 78/242 (32.23%), Postives = 109/242 (45.04%), Query Frame = 0
Query: 34 HTCLALLDSCSTLSELKQIHAQLLRTGLFFDAFTASKIVAFSSLDD-----TGSLHYACR 93
H LALL SCS+ S+LK IH LLRT L D F AS+++A D T L YA
Sbjct: 13 HPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 94 VFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVDGLLPDRFTFPSLFKATKDL-- 153
+FSQI NP F N +IR F+ P A FY QM+ + PD TFP L KA+ ++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 154 -AVGKELHCHSTKLGFSSE----------------------------------------- 213
VG++ H + GF ++
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 214 ----GVRQNAR-------YKRGFLGN-MVGAYAQWDQPQKAIELFEMMEVEDVKANEVAW 215
G+ +NAR ++ F + M+ YA+ + +KAI+LFE M+ E V ANE
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
BLAST of Sgr030516 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 0
Query: 10 ISPTLSAKNPPATANRSSSSSSPPHTCLALLDS-CSTLSELKQIHAQLLRTGLFFDAFTA 69
+SPT+ + + SS S +T L L+D+ CST+ ELKQIHA L++TGL D TA
Sbjct: 1 MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA 60
Query: 70 SKIVAFSSLDDTGSLHYACRVFSQISNPTPFTCNSIIRGFTNKNLPRDAVLFYRQMVVD- 129
S+++AF + ++YA VF++I++ PF N+IIRGF+ + P A+ + M+
Sbjct: 61 SRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSS 120
Query: 130 -GLLPDRFTFPSLFKATKDLAV---GKELHCHSTKLGFSSEGVRQN 170
+ P R T+PS+FKA L G++LH K G + +N
Sbjct: 121 PSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN 165
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_034225178.1 | 4.8e-61 | 54.80 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunu... | [more] |
XP_023897242.1 | 2.4e-60 | 54.29 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Querc... | [more] |
PQQ20229.1 | 2.4e-60 | 53.60 | pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora] | [more] |
XP_021817716.1 | 9.1e-60 | 53.60 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isofor... | [more] |
XP_008242743.1 | 1.5e-59 | 54.00 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... | [more] |
Match Name | E-value | Identity | Description | |
O82380 | 7.8e-22 | 31.25 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9SJZ3 | 2.3e-21 | 32.68 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Q9LTV8 | 6.6e-21 | 34.98 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9FG16 | 5.6e-20 | 32.23 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q9SJG6 | 1.8e-18 | 36.75 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A5E4GQU3 | 2.3e-61 | 54.80 | PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B006710 PE=3 SV... | [more] |
A0A314ZLN2 | 1.2e-60 | 53.60 | Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora O... | [more] |
A0A6P5SU63 | 4.4e-60 | 53.60 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isofor... | [more] |
M5VTK1 | 2.8e-59 | 54.00 | DYW_deaminase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G236... | [more] |
A0A6P4BGB8 | 5.4e-58 | 52.76 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Ziz... | [more] |