Sgr030232 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr030232
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Splicing factor U2af small subunit B-like
Location	tig00153574: 1617759 .. 1626036 (-)
RNA-Seq Expression	Sgr030232
Synteny	Sgr030232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGCATTTGGCATCTATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCCTTCTACTTTAAGATCGGGGCCTGCCGGCACGGCGATAGGTGTTCGCGGTTGCACACGAAGCCCAGCATAAGCCCGACCCTCTTGCTTTCTAATATGTACCAGAGACCCGACATGATTACTCCTGGTGTGGACGCGCAGGGGAATCCCATTGACCCTCGTAAGATCCAGCACCATTTTGAGGTAGAACTTCTTCCAAATTCCAAATTGCCTTTATCTTCCTTTTCGTTCTTTTAATTGGTTTGATAGTGTGAATTTTTGTTGTTAATTTTTTAATATTTGGGATGAATCTAGAATTTTTGGGTTGAATTGTTATTTTCTGATAGATTTGAACATAATTTTGCTGTAATATTAGAGGTTATCTTGTTTGGTTGATTCTTAAGCGATCTTGGTATTTAAAATAGAATCGGAAATTGTTTGTTGAATCTTTATTCATTTAGATTTATACTCTCCCGTGTTACCCTTTTGCATGCCCGTGTCGTATAGGCCCAGAAGATGGTTCCTCTTTTTAATTTGGGGGGAATTTATCTTGTGTTATTTTTGAATCATTATGCCAGGTTGTTTAGTTCTTGTTGTGCGTAGAAAAATTGTCGCCTAATTGTTGATTTGTGCACATTTTAGGAGTTCTATGAAGATCTATTCCAGGAACTGAACAAGTACGGGGAGATTGAGAGTCTGAATGTCTGTGACAATCTAGCTGACCACATGGTAACACTGTTCTCTTCTCCCTTTGTTTGAAGGAAACAAAAATTTTTAATCCGCTTTTTCACATGTCGTATGCTAATTCATCATAGCATAGCTAATAAACAGTTATCTGATGCGTTTGATTAGGTGGGTAATGTTTATGTCCAATTTCGAGAGGAGGAGCAAGCCGCAAATGCTCTTCGGAATCTGACTGGCAGATTTTATGCTGGTTAGTTGGAGTCTCTCCCTCCCTGTCATTCTTGGTTTTTATTTTTCTCCATATTATCTGGTTGTAAACCATCTTGTATGCAGCTTTTGATTTTGAAATTGGATGTGTAACATCTGGAAAATCTTTTTTGCAGGACGTCCAATCATTGTTGACTTCTCTCCAGTGACAGACTTCAGAGAAGCCACGTGTAGACAATATGAAGAAAACATGTGTAATCGTGGTGGATATTGTAATTTCATGCATCTGAAGAGGATTAGTAGGTATGTTTTCTTCACTTCCTCCCTCCTTTCCCATAAGAATGTATTACTTTTCTATTCACTGTGAATTACTCCTTTTGTTATGTGCACTTTATCTGATAGCCATGATCTTTCCTCTCTTTCAGGGAACTGAGGCACGAGCTGTTTGCTATATATCGACGTAGGCGAAGCCACAGTAGGAGTAGGAGCCGGAGCCCCTATAGGCATTGGAGTTATGAAGAACGCTCTTATGGTAGGCATGGTCATAGTCGGAGGTATGATGACAGAGATGCTTATCATGATAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCAGGTCATAGAAGAAGCAGAAGTCGTAGTCCACGGGAAGGAAGAACCAAAGTCCAGGAAGAGAAGGGAGTGAAGAGAGGCGAGCTAAAATTGAGCAGTGGAACAAGGAAAGAGAATGGCAAGCAAATGATAACAATGCCAATTTTGATGGCAACAAAAATAGCCGTGAGAACAGTTATAATGGTGATGTAAAGTATGCAAATCAAACTTGTGGCTATGAGGAGCAGCAGCAGCGGCAGCCTCCTGAGCAAGGCTATGGTTACTGATTTGATCTGTTTACCTAGAACTTAGCTTCAGGTATGGTTCCTTTCATATACAACTACTTAGGCTTCTGTTTGAGGACTTGCGTTCATTTATTTATATTTCCATCCTAATATCATATCCCAAGTTGCAAGTAGTTTGCTGGTTCTAGTGATCTGATTTCCCCTGCCTCTCTTTAACCTTTTCTTTAACTCTTTTATTTTTTTGTTATTTTTTTCGGCATTCAAATAGAGTAGGAACAACAAATTTTTTAATTGCGTTGGTCCAGTATTTTTCTGAATTTTTGTCCGCCCTGTTCCTACTGGTCTTCTTTTTGCATTCTTAAATAATTTTGAGCAAGAAGGTATGGATACTATTCGAGCCATGTGGAAGCTAAAAAAAAAATTAGACGAAGGAAAAAAAGGGAAGAAAGAGACATTTTATGTGATAAAATTCATATGTAAGTGGTGTTAAAAGTTGCAAGAAATGATGTTTGAGATTGAAGTTCTTTTCCCCCTTTTGTTGTGAAACCGGTTGCTTCTCTTTGATGTATGGAAAGTACGAAAAAGCATAGGAGAAAACCCCTTAACTTACAGAAAGTTTCTTGGGTCGGACTGTCAGAGTTCATCAATAAAGCATTATAATTACAAAAAAAGTAGATGTCAATTTTTTTTAAAACCTCCCTACTTAGCAGCGAAACGGCCTTGGATGTGTTTGTCTTCTCATTATGCAATTGTATGTATGCATTCTTCTAATATTCTTTATTTTATAGCAAATATACAATGATTTTACAGTCAGGTATTAAGACTGCTGCTCATGAAGACTTGTGAACGATCCAATTATCATATTACGGTTTTTTTTCCCTATGAACTTTACGCGTTATCTTTTCGTTGATATTAAGAAAAATGCGATCTCATCATTATCTAAGTTTTGCAGGTTCAGGTTTTCCCTGCTTGTAAGGTTTCGAGGCTAAGTTGTGACCATGAAATTTTTGTACAGGTTAATATGGTCCACTGTGTAGGATGATTGGCTTTACAGGATCTGCAGGTTACGGTTCTGGAAGAACTAAGGAAGCATGTAGTGGAGGAGACCTACTCTTATTTTGATATTTTATATTGATGTGGTGGTGTGGTTGCAGGTTAGGGATGTTGCTGAAACATTTTGCATTTATCTGATATATTCCTATTAGCAGAAAGAAAACTTTGGGGTACGCCTTTTGTCACATTTGAAAGATAAGTGTGTCAAAGTTGATTAAGGATTCTTTCTTTCCTCTAAGATCATCGGGTTTTCCTTCGCCTTAACTCGCAAATTATGATCAAAAGAACGTTTTGGACAGGTGTTTGTAATGAAATGGATAGCCTTCGGAAATTTCTTGTGATGTTTTTCAAAGCTGTTAAATTCTGTTGCCAGTTTCCGAATTGAAAATTGTTTTTAAGATGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTACTGTCGCCTCCCCTCACTGCATCCTCTTCATCACTTACCCCCTCTTGTAAATTTGTGATTCTCACTTTATATAAGATGACATACCTCCCATTTTAAATGAAATTTTGAGTGAAGTAGCATATATGTAAATTGCTGAACAAATATGATGTTATGATGTGCCTACAACCAAATATTAACTTTATGGGAGTGGCGAGTGGATATCAGTTGAATCTAAGACAGTTTCATTAGAAAGTTGATATTTTAGAGGTACTATGGATTTTATATTGTGTTATTAATAAAACAATATACGATTAGTGGGCTCTACAAAGTTGTTGATTGGGGAGGACAACGAGAGGAAAATTTATCTTTAGATTCTAAGTCTTCTCCGCTCCGATAGCATCATTTCTTGTAGCACTGCCTTTGTTTGGTGTTCTTGCATCATAGTTCAGCTTAAGGGTTGTTCACACTTTTGATGGACTTCTTGATCTTGCCTTTGGCCTTTGCTCGAGCTCTCAATTGTGGTGGACATGTCTCTCACACAGACAAGGTGGACCTAGATGGGTTTGCAAATCATTTAGTTCAAAATATTACTTGAAAACAAAGCGAATTCCTTCATTGTTTTGAAATCTAGGCAAACTTCACTCAAGAGTTGAAGAGCTTTGTAATTGAATGACACAAATGACATTTTTTGATCACCTTGCAGCCTAAAATACCGACAGAAGGAGAGGAACAAACAATCTCTCTCAAGTTTCTCTTAGGTTTGTGGAGCGTAAAAATTGAAAGGTGAGGAAGAAAAATAAGTTATAGGTGGAGGAAGAAACATTTCAAAATGAACCGTCAGGATTGAAGCCTGTTTTTGGATTCAATGACCAAGATTAAAGCAATAACTACCGATGTTTGAAATACAAAATGATTTGATGTGATAACTCAATTTCTATTCAAATAATTGTTGGTACTACTATCTTGAACATGCCACGTGTTTAGATGGAACATAACCATTAGTTAGGTGGCGGAGATCCTTGTCCACGTTCAAGAGTTGAACAAGGAGTGAGAGGTAAAGCTATATGGGAAATTCGCGCTAACTTCATAGATAAAGCCAGGTGCTAGTGATTGCTAACATATGCTCAACATAGTTCGCTTTAACCGCACAAGACAGATCACTACTAAACCATGTCTAATTGGAGGCTCTTTTAGCTTGATATACGATGACACGTCATACTTCTCCAATCAACTACTTTACACGACTCAACTAAAGGTCTCATATTTCACCATTCATTTATGTGATTTATGACAAGATCTTTGGTCGTACTTACCCAAGATTTAAATATTCGTATTGAAATTTTGTTAAATTCTTTTACTCATATTTTTCTATTGTAGGTCTAACTTGATCTTCGAAGTGCTTCGTCAAACACCATACTAATAGTAGACATTTAATTTTCTCTTGTAGATTATTAGATGTTAACGATAGATTTTTTTACATGTTAGGTTCAAGAGAAACACAAGTGTGAAATTGTTAAAAGTCAATAACTTTTGAAGCATACATAATATTTGGTAGTTTCTCATCTAACCCAAAAACAACATGTTGAAAATTGAGGTGTCCGTGAAATGAATTGCTATGCTATGCTATTAAGATTGGAACAAGAAATCCATGAACATTATTAGGCGAGGTGGCTGCTCTTGGCAGTGCTTTAACATGTTGAAAACAATTTCGTCTCGAACTCAATAGCACTCGAGGCAAACGAAAAAAGTTTCAACCCTAATGCTCCCAACCTTTTCGAGGCTATATAGATGTTGATTGGGGAGGAAATGTAGCATAACAATGGAGTAATGTGAAATAGTAAGAAATAGACTTGGATAGCATATATTATGAAAGTAGAATTTGTAGTTTATCCATTATAATATAATAGAACAAAGGATTGGTTAATTGGTTCTTAAAAATTGAAAAAAAAAAAATTTCAATTACGTTCTTGAAATTTTTTATTTTGATTATAATATTTCTTTGTCATTAATACTGCTACTTAAATATTGAAGGTGGAAAGTAACTGGACTAACAAGTGATAATTTGATATAATGTGACAACATATGGTATAAGAGAGCATGCTAGCTAGCTTGATAAAATATAGGGCTAATAAGCCAAAAAATTCGGTTTAAAATGTGATCCTCCCCAATCAGAATTTTTATCCCGCTTGTACTTATTTTATCAAGTTGGCCCTATTCACTTGCTAAATGATTCAATGTGATGCGCCGATTTTCGCTCCAATAATTATTGTCGCTACTATCCCAAGCATGCTAAGTGTTCGCATGGACAATTGATCGTTAGCTAGTTGTGCTAGATCCTTTGAGCACGTTTAAGACATTTCTCGCTCAGTTCTCCTTCGAGTTAGAGCAGGAGGGAAACTTTATGGACAATTTTTCACCCAAGACATGACAAGTCACTGTTGAAGACTTCATTCATATATTGTTAAACCTAAAATGAGTGTTCTAAACCTGCTGCAATGTTTAGTTTATGTTTTGTATTTTCCAGACATGTTTTTCCGTTAGCTCTTAGTAATTTATATAGTGTCAAATGCCTTAGGTTGTTTATACAACTTTTCTATACATTCATGAGCAAATCATTTAACTTGATTAGTACATTGAGCACGTTCATCCCAATTATATGTTATTGCTTCATGTATCCATTTGATCGTTTGCCTTAACAAACACAAATACCGCACTCATATCAGCCAAACCCTCGATTTTCTCTTCTCGCATACGTCGATGATAGATTTTTGACACAGTATGGCGTGGGAATGATTAAAATTCAATAATTTTGCAACATTTTCAAAGCTTATCCTCTTTCATACATAATACCCAACAGCAACATCTTGAAAATGGAGGCTTTTGTTTAATAGCATCGCTATGATGCCATGCCATCAGATTGGAACAAGAAATCCACGAACATCATTAGCCAATTGAAGCCGCTGCTCTTGCCTGCGGTTTCAGACTGCTTACAACGCGGCGAAAACGACATCGTCTTGGACTCGGTAGCCTGCCCTTTAGGGCAAAGAAAAAAATTTCTAGACCCTAATTCTCCCAATTTCTCGCCCCTATTTAGGCCTGCGGCGCGCACCAAAATTAGCCAATCAGAATTCTGCTTTTGTACACGTAATCATATACTTTCGGGGAAAAAAAAAATGGAGACCTATTTAAAATAAGCTAAAAATCCCACTCAAATTTGATCAACTTTTTTTTTTTTTTTTTAGGATTATCTTTAGATTATTTACATGAAAGATTATTTAAATTTGATATTGCTAATTCTTTTCTTCTATTGAGAATAAAATATTTCTCAATTATCTGCTTTTTAGTTTTTGAAATTTGAAAAAAATTTCAAAAGTTGTTTTAAGAAGTGATAATTCAACCAGAGAAAATCGTAGTAAATAAACATAATTTTTAATAATTAGAAAAATAAAAATAAAATCTAGATCGAAGGAGCTCAATGAAAGTAGTTTTTTAAAATTCAATTTTCATATTTGAAATCCTAGTTTTTTAAAAGGTGAAAAACAAAATATAAAAACATTATTAATAGACAATGCTAATTTATTAGGGAAACTACAAGTCTGGCATAATTTTGATAAAATATTACAAAAATTGAAACTAAAACAAATTGTACATAGAGAAAAAATTGAAACGTTAATCAATATGTAAGTTAATTAGTGATATAGTTAATACATATATAGGTTGATCAATGATACATTTAACCAATATGTAGATTGATCAATTATACAATTAATCAATATCTAAGTTAATTATAAATTTATGTTAATTAACAACCATCATATATAAAATAAATAAAAAATACTGATTTATCATTATTAAATTTAATCCATGATCAATAAGTTTAAAAATTTCTACATTTACAATTATTAATATAAAATGTTGATTGTATTTATATTTAGGTTAAATTACAAATTTGGTCTCTATGGTTTAGGAAAAGTTTCAATTTAGTCCCTATCGTTTTAAAATGTTTTATTTAGGCTTCATGGTTTGAGCTTAGTTTCAATTTGATCTCTATAGTTTTAAAAGTTGCAATTTAGTCCTTATGATTTAGGCTTAATTGTAATTTAGTCCTTATGGTTTGGTTAAATCTCACAAGCCATTTCTAAATTGTGTTTTACTCATTCGAAAAACCTAGTTATTTCATTTTATTTTTTACTTAATCCTAAAACTTAATACTAGTTAGTCAAATAGAAAATATCATTTTATTACCACGTAAAATAATGTGTGAATATGGTAACGAGAAAACTCAATTGTAAAGTTCGACAAAGCTATAAGGACCAAATTGAAAATTTTAAAATCATAAAGACCAAATTGAAACTAAACCTAAAATATAAGGACTAAATTAAAACTAAGCTTAAACCATAAAGACTAAATTAAAACTTTTAAAAACATAGAGATCAAATTAAAATTTTATCCAAATCATAAGAATTAAATTTGTAATTTAATCCAATTATCAATTAAACACGGTTTTTTAATATTATCATTTTTTGAAGGGTTTCTCAAGTGGAAGAAGTCTGTGCCGAAGCAGAAGTAAATCGCTTGAAGAAACCGAATCATATTTTACTTACTTTCGAAGCTGAACTGCGAGTAATGGAGGTTGAAATCGGCGGGATCGTTCGACAGCAAGATCGGTCGCCGGCGTTCCTTCGAGTATTGCCGTACGCAAGTAGCCACTAGATCGGCAACCGTCGCCTCTGCAGACATCAGTACGTGCACTGGCCCTATGCTTCCACGGACCGTCACGTTCACAAGTAACTTCGCCGCCGCCCTAGGCAATATATCCGATGGAGGAGCAACTCCGGCCGTCGCATTCCGGTAAGATAGCAACTCGGGCGCTGTCTTCGGCCTTCGGAGACGACCTCGCGAAGCCGTCTTCTCTGCAGTTTCACGGCGAAACGACGAGGATTTCTCGCAGAGTACTCTGATCTCCTCGCTTCCTCTCCGGTGATTATTCCTGTGAGACGGCATGATGATAGAAAAGAAAGAGGCCGGAGACTATGA

mRNA sequence

ATGGCGGAGCATTTGGCATCTATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCCTTCTACTTTAAGATCGGGGCCTGCCGGCACGGCGATAGGTGTTCGCGGTTGCACACGAAGCCCAGCATAAGCCCGACCCTCTTGCTTTCTAATATGTACCAGAGACCCGACATGATTACTCCTGGTGTGGACGCGCAGGGGAATCCCATTGACCCTCGTAAGATCCAGCACCATTTTGAGGAGTTCTATGAAGATCTATTCCAGGAACTGAACAAGTACGGGGAGATTGAGAGTCTGAATGTCTGTGACAATCTAGCTGACCACATGGTGGGTAATGTTTATGTCCAATTTCGAGAGGAGGAGCAAGCCGCAAATGCTCTTCGGAATCTGACTGGCAGATTTTATGCTGGACGTCCAATCATTGTTGACTTCTCTCCAGTGACAGACTTCAGAGAAGCCACGTGTAGACAATATGAAGAAAACATGTGTAATCGTGGTGGATATTGTAATTTCATGCATCTGAAGAGGATTAGTAGGGAACTGAGGCACGAGCTGTTTGCTATATATCGACGTAGGCGAAGCCACAGTAGGAGTAGGAGCCGGAGCCCCTATAGGCATTGGAGTTATGAAGAACGCTCTTATGGTAGGCATGGTCATAGTCGGAGGTATGATGACAGAGATGCTTATCATGATAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCAGGAAGAGAAGGGAGTGAAGAGAGGCGAGCTAAAATTGAGCAGTGGAACAAGGAAAGAGAATGGCAAGCAAATGATAACAATGCCAATTTTGATGGCAACAAAAATAGCCGTGAGAACAGTTATAATGGTGATGTAAAGTATGCAAATCAAACTTGTGGCTATGAGGAGCAGCAGCAGCGGCAGCCTCCTGAGCAAGGCTATGGTGGCGGAGATCCTTGTCCACGTTCAAGAGTTGAACAAGGAGTGAGAGGTAAAGCTATATGGGAAATTCGCGCTAACTTCATAGATAAAGCCAGGTTGAAATCGGCGGGATCGTTCGACAGCAAGATCGGTCGCCGGCGTTCCTTCGAGTATTGCCGTACGCAAGTAGCCACTAGATCGGCAACCGTCGCCTCTGCAGACATCAGTACGTGCACTGGCCCTATGCTTCCACGGACCGTCACGTTCACAAGTAACTTCGCCGCCGCCCTAGGCAATATATCCGATGGAGGAGCAACTCCGGCCGTCGCATTCCGTTTCACGGCGAAACGACGAGGATTTCTCGCAGAGTACTCTGATCTCCTCGCTTCCTCTCCGGTGATTATTCCTGTGAGACGGCATGATGATAGAAAAGAAAGAGGCCGGAGACTATGA

Coding sequence (CDS)

ATGGCGGAGCATTTGGCATCTATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCCTTCTACTTTAAGATCGGGGCCTGCCGGCACGGCGATAGGTGTTCGCGGTTGCACACGAAGCCCAGCATAAGCCCGACCCTCTTGCTTTCTAATATGTACCAGAGACCCGACATGATTACTCCTGGTGTGGACGCGCAGGGGAATCCCATTGACCCTCGTAAGATCCAGCACCATTTTGAGGAGTTCTATGAAGATCTATTCCAGGAACTGAACAAGTACGGGGAGATTGAGAGTCTGAATGTCTGTGACAATCTAGCTGACCACATGGTGGGTAATGTTTATGTCCAATTTCGAGAGGAGGAGCAAGCCGCAAATGCTCTTCGGAATCTGACTGGCAGATTTTATGCTGGACGTCCAATCATTGTTGACTTCTCTCCAGTGACAGACTTCAGAGAAGCCACGTGTAGACAATATGAAGAAAACATGTGTAATCGTGGTGGATATTGTAATTTCATGCATCTGAAGAGGATTAGTAGGGAACTGAGGCACGAGCTGTTTGCTATATATCGACGTAGGCGAAGCCACAGTAGGAGTAGGAGCCGGAGCCCCTATAGGCATTGGAGTTATGAAGAACGCTCTTATGGTAGGCATGGTCATAGTCGGAGGTATGATGACAGAGATGCTTATCATGATAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCAGGAAGAGAAGGGAGTGAAGAGAGGCGAGCTAAAATTGAGCAGTGGAACAAGGAAAGAGAATGGCAAGCAAATGATAACAATGCCAATTTTGATGGCAACAAAAATAGCCGTGAGAACAGTTATAATGGTGATGTAAAGTATGCAAATCAAACTTGTGGCTATGAGGAGCAGCAGCAGCGGCAGCCTCCTGAGCAAGGCTATGGTGGCGGAGATCCTTGTCCACGTTCAAGAGTTGAACAAGGAGTGAGAGGTAAAGCTATATGGGAAATTCGCGCTAACTTCATAGATAAAGCCAGGTTGAAATCGGCGGGATCGTTCGACAGCAAGATCGGTCGCCGGCGTTCCTTCGAGTATTGCCGTACGCAAGTAGCCACTAGATCGGCAACCGTCGCCTCTGCAGACATCAGTACGTGCACTGGCCCTATGCTTCCACGGACCGTCACGTTCACAAGTAACTTCGCCGCCGCCCTAGGCAATATATCCGATGGAGGAGCAACTCCGGCCGTCGCATTCCGTTTCACGGCGAAACGACGAGGATTTCTCGCAGAGTACTCTGATCTCCTCGCTTCCTCTCCGGTGATTATTCCTGTGAGACGGCATGATGATAGAAAAGAAAGAGGCCGGAGACTATGA

Protein sequence

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTSPGREGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYNGDVKYANQTCGYEEQQQRQPPEQGYGGGDPCPRSRVEQGVRGKAIWEIRANFIDKARLKSAGSFDSKIGRRRSFEYCRTQVATRSATVASADISTCTGPMLPRTVTFTSNFAAALGNISDGGATPAVAFRFTAKRRGFLAEYSDLLASSPVIIPVRRHDDRKERGRRL

Homology

[Close]

BLAST of Sgr030232 vs. NCBI nr
Match: XP_004139466.1 (splicing factor U2af small subunit B [Cucumis sativus] >XP_011654262.1 splicing factor U2af small subunit B [Cucumis sativus] >KGN64894.1 hypothetical protein Csa_022738 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 3.5e-159
Identity = 287/326 (88.04%), Postives = 297/326 (91.10%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPR IQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA+YRRR SHSRSRSRSPYRH SYEERSYG+HGHSRRYD+RDAYH+SRSRRHR+TS
Sbjct: 181 RHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHESRSRRHRTTS 240

Query: 241 PG-----------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYN 300
           PG                 REGSEERRAKIEQWNKERE Q NDNNAN D N+N+ E SY+
Sbjct: 241 PGHRSRSRSPRGRKNRSPVREGSEERRAKIEQWNKERE-QGNDNNANSDDNRNNHEKSYD 300

Query: 301 GDVKYANQTCGYEEQQQRQPPEQGYG 310
            +VKYANQTCGYEEQQQRQPPEQGYG
Sbjct: 301 SEVKYANQTCGYEEQQQRQPPEQGYG 325

[Close]

BLAST of Sgr030232 vs. NCBI nr
Match: XP_008461981.1 (PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >XP_008461988.1 PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >KAA0065889.1 splicing factor U2af small subunit B-like [Cucumis melo var. makuwa] >TYK15128.1 splicing factor U2af small subunit B-like [Cucumis melo var. makuwa])

HSP 1 Score: 570.9 bits (1470), Expect = 1.0e-158
Identity = 287/326 (88.04%), Postives = 297/326 (91.10%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA+YRRRRSHSRSRSRSPYRH SYEERSYGRHGHSRRYD+RDAYH++RSRR R+TS
Sbjct: 181 RHELFAMYRRRRSHSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYHENRSRRRRTTS 240

Query: 241 PG-----------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYN 300
           PG                 REGSEERRAKIEQWN+ERE Q NDNNA  D N+NS E SY+
Sbjct: 241 PGHRSRSRSPRGRKNRSPAREGSEERRAKIEQWNRERE-QGNDNNAKSDDNRNSHEKSYD 300

Query: 301 GDVKYANQTCGYEEQQQRQPPEQGYG 310
            +VKYANQTCGYEEQQQRQPPEQGYG
Sbjct: 301 SEVKYANQTCGYEEQQQRQPPEQGYG 325

[Close]

BLAST of Sgr030232 vs. NCBI nr
Match: XP_023519661.1 (splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo] >XP_023519662.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo] >XP_023519664.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567.8 bits (1462), Expect = 8.5e-158
Identity = 286/329 (86.93%), Postives = 297/329 (90.27%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA Y RRRSHSRSRSRSPYRH SYEER YGRHGHSRRYD+RDAYHDSR+RRHRSTS
Sbjct: 181 RHELFASYHRRRSHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PG------------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSY 300
           PG                  REGSEERRAKIEQWN+E+E Q N NNAN DGN+NS E SY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREGSEERRAKIEQWNREKEQQENYNNANSDGNENSHEKSY 300

Query: 301 NGDVKYANQTCGYEEQQQRQ--PPEQGYG 310
           NGDV+Y NQTCGY++QQQ+Q  PPEQGYG
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQKPPEQGYG 329

[Close]

BLAST of Sgr030232 vs. NCBI nr
Match: XP_022964867.1 (splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022964868.1 splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022964870.1 splicing factor U2af small subunit B-like [Cucurbita moschata] >KAG7019309.1 Splicing factor U2af small subunit A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 564.7 bits (1454), Expect = 7.2e-157
Identity = 284/329 (86.32%), Postives = 297/329 (90.27%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA Y RRRSHSRSRSRSPYRH SYEER YGRHGHSRRYD+RDAYHDSR+RRHRSTS
Sbjct: 181 RHELFASYHRRRSHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PG------------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSY 300
           PG                  REGSEERRAKIEQWN+E+E Q N NN+N DG++NS E SY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREGSEERRAKIEQWNREKEQQKNYNNSNSDGHENSHEKSY 300

Query: 301 NGDVKYANQTCGYEEQQQRQ--PPEQGYG 310
           NGDV+Y NQTCGY++QQQ+Q  PPEQGYG
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQKPPEQGYG 329

[Close]

BLAST of Sgr030232 vs. NCBI nr
Match: XP_038894442.1 (splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894443.1 splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894444.1 splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894445.1 splicing factor U2af small subunit B-like [Benincasa hispida])

HSP 1 Score: 558.9 bits (1439), Expect = 4.0e-155
Identity = 284/326 (87.12%), Postives = 294/326 (90.18%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFAIYRRR S SRSRSRSPYRH SYEERSYGRHGHSRRYD+RDAY++SR  RHR+TS
Sbjct: 181 RHELFAIYRRRHSRSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYYESRGMRHRTTS 240

Query: 241 PG-----------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYN 300
           PG                 REGSEE RAKIEQWN+ERE Q NDNN N D NKNS E SY+
Sbjct: 241 PGHRSRSRSPRGRKNRSPVREGSEESRAKIEQWNRERE-QGNDNNGNSD-NKNSHEKSYS 300

Query: 301 GDVKYANQTCGYEEQQQRQPPEQGYG 310
           GDVKY+NQTCGYEEQ+Q+ PPEQGYG
Sbjct: 301 GDVKYSNQTCGYEEQRQQLPPEQGYG 324

[Close]

BLAST of Sgr030232 vs. ExPASy Swiss-Prot
Match: Q9S709 (Splicing factor U2af small subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF35A PE=1 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 4.6e-106
Identity = 203/289 (70.24%), Postives = 229/289 (79.24%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQG P+DPRKIQ HFE+F+EDLF+EL K+GEIESLN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61  GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 181 RHELFAIYRR-----RRSHSRSRSRSP------------YRHWSY--EERSYGRHGHSRR 240
           R +LF  YRR      RS SRSRS SP            +R +S+   +R + RHG  +R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240

Query: 241 YDDRDAYHD---SRSRRH----RSTSP--GREGSEERRAKIEQWNKERE 262
             +R    +   SR RR     R  SP  GREGSEERRA+IEQWN+ERE
Sbjct: 241 SSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNRERE 289

[Close]

BLAST of Sgr030232 vs. ExPASy Swiss-Prot
Match: Q9FMY5 (Splicing factor U2af small subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF35B PE=1 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 6.0e-106
Identity = 203/280 (72.50%), Postives = 225/280 (80.36%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD QG P+DP KIQ HFE+FYED+F+ELNK+GE+ESLNVCDNLADHM+GNVYV F+EE+
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
            AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RHELFAIYR---RRRSHSRSRSRSPYRHWSY-EERSYG------RHGHSRRYDDRDAYHD 240
           R +LF  YR   RR S SRSRS SP R   +  ER  G      RHG+ +R  DR   HD
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 ---SRSRRH----RSTSPG--REGSEERRAKIEQWNKERE 262
                 RRH    RS SP   REGSEERRA+IEQWN+ER+
Sbjct: 241 RDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERD 280

[Close]

BLAST of Sgr030232 vs. ExPASy Swiss-Prot
Match: Q9ZQW8 (Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35A PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.0e-105
Identity = 199/288 (69.10%), Postives = 222/288 (77.08%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           G+DAQGNPIDP KIQ  FE+FYED+F+EL+KYGEIESL+VCDN ADHM+GNVYVQFREE+
Sbjct: 61  GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAA AL+ LTGR+Y+GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL 180

Query: 181 RHELFA-IYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYH---------- 240
           R  LF  ++R RRSHS  RSRSP  +  +  R Y R   SR  D  D Y           
Sbjct: 181 RKRLFGHLHRSRRSHSHGRSRSPSPY--HYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGG 240

Query: 241 --------------DSRSRRHRS--TSPGREGSEERRAKIEQWNKERE 262
                         D   RRHRS   SP R+GSEERRA+IEQWN+ERE
Sbjct: 241 SRRSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNRERE 286

[Close]

BLAST of Sgr030232 vs. ExPASy Swiss-Prot
Match: Q6AUG0 (Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35B PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 6.4e-100
Identity = 193/305 (63.28%), Postives = 220/305 (72.13%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQG PIDP K+Q HFE+FYED+++EL+K+GE+E+LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61  GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QA  A   L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I REL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEER----------------------------- 240
           R +L+   R RRSH RSRS SP       +R                             
Sbjct: 181 RRKLYG-GRSRRSHGRSRSPSPRHRRGNRDRDDFRRERDGYRGGGDGYRGGGGGGGGDGY 240

Query: 241 ----SY------GRHGHSRRYDDRDAYHDSRSRRH-----RSTSPGREGSEERRAKIEQW 262
               SY      GR G   RY   D Y D   RRH     R+ SP RE SEERRAKIEQW
Sbjct: 241 RGGDSYRGGGGGGRRGGGSRY---DRYDDGGRRRHGSPPRRARSPVRESSEERRAKIEQW 300

[Close]

BLAST of Sgr030232 vs. ExPASy Swiss-Prot
Match: Q01081 (Splicing factor U2AF 35 kDa subunit OS=Homo sapiens OX=9606 GN=U2AF1 PE=1 SV=3)

HSP 1 Score: 255.8 bits (652), Expect = 9.4e-67
Identity = 127/218 (58.26%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P   + 
Sbjct: 1   MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQEL-NKYGEIESLNVCDNLADHMVGNVYVQFREE 120
             D     +   ++Q H++EF+E++F E+  KYGE+E +NVCDNL DH+VGNVYV+FR E
Sbjct: 61  SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120

Query: 121 EQAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRE 180
           E A  A+ +L  R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180

Query: 181 LRHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHG 218
           LR EL   Y RRR   RSRSRS  R     +R  G  G
Sbjct: 181 LRREL---YGRRRKKHRSRSRSRERRSRSRDRGRGGGG 215

[Close]

BLAST of Sgr030232 vs. ExPASy TrEMBL
Match: A0A0A0LVA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145960 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.7e-159
Identity = 287/326 (88.04%), Postives = 297/326 (91.10%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPR IQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA+YRRR SHSRSRSRSPYRH SYEERSYG+HGHSRRYD+RDAYH+SRSRRHR+TS
Sbjct: 181 RHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHESRSRRHRTTS 240

Query: 241 PG-----------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYN 300
           PG                 REGSEERRAKIEQWNKERE Q NDNNAN D N+N+ E SY+
Sbjct: 241 PGHRSRSRSPRGRKNRSPVREGSEERRAKIEQWNKERE-QGNDNNANSDDNRNNHEKSYD 300

Query: 301 GDVKYANQTCGYEEQQQRQPPEQGYG 310
            +VKYANQTCGYEEQQQRQPPEQGYG
Sbjct: 301 SEVKYANQTCGYEEQQQRQPPEQGYG 325

[Close]

BLAST of Sgr030232 vs. ExPASy TrEMBL
Match: A0A1S3CFU2 (splicing factor U2af small subunit B-like OS=Cucumis melo OX=3656 GN=LOC103500459 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 4.9e-159
Identity = 287/326 (88.04%), Postives = 297/326 (91.10%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA+YRRRRSHSRSRSRSPYRH SYEERSYGRHGHSRRYD+RDAYH++RSRR R+TS
Sbjct: 181 RHELFAMYRRRRSHSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYHENRSRRRRTTS 240

Query: 241 PG-----------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYN 300
           PG                 REGSEERRAKIEQWN+ERE Q NDNNA  D N+NS E SY+
Sbjct: 241 PGHRSRSRSPRGRKNRSPAREGSEERRAKIEQWNRERE-QGNDNNAKSDDNRNSHEKSYD 300

Query: 301 GDVKYANQTCGYEEQQQRQPPEQGYG 310
            +VKYANQTCGYEEQQQRQPPEQGYG
Sbjct: 301 SEVKYANQTCGYEEQQQRQPPEQGYG 325

[Close]

BLAST of Sgr030232 vs. ExPASy TrEMBL
Match: A0A5D3CV58 (Splicing factor U2af small subunit B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00620 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 4.9e-159
Identity = 287/326 (88.04%), Postives = 297/326 (91.10%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA+YRRRRSHSRSRSRSPYRH SYEERSYGRHGHSRRYD+RDAYH++RSRR R+TS
Sbjct: 181 RHELFAMYRRRRSHSRSRSRSPYRHRSYEERSYGRHGHSRRYDERDAYHENRSRRRRTTS 240

Query: 241 PG-----------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYN 300
           PG                 REGSEERRAKIEQWN+ERE Q NDNNA  D N+NS E SY+
Sbjct: 241 PGHRSRSRSPRGRKNRSPAREGSEERRAKIEQWNRERE-QGNDNNAKSDDNRNSHEKSYD 300

Query: 301 GDVKYANQTCGYEEQQQRQPPEQGYG 310
            +VKYANQTCGYEEQQQRQPPEQGYG
Sbjct: 301 SEVKYANQTCGYEEQQQRQPPEQGYG 325

[Close]

BLAST of Sgr030232 vs. ExPASy TrEMBL
Match: A0A6J1HM65 (splicing factor U2af small subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC111464850 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 3.5e-157
Identity = 284/329 (86.32%), Postives = 297/329 (90.27%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA Y RRRSHSRSRSRSPYRH SYEER YGRHGHSRRYD+RDAYHDSR+RRHRSTS
Sbjct: 181 RHELFASYHRRRSHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PG------------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSY 300
           PG                  REGSEERRAKIEQWN+E+E Q N NN+N DG++NS E SY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREGSEERRAKIEQWNREKEQQKNYNNSNSDGHENSHEKSY 300

Query: 301 NGDVKYANQTCGYEEQQQRQ--PPEQGYG 310
           NGDV+Y NQTCGY++QQQ+Q  PPEQGYG
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQKPPEQGYG 329

[Close]

BLAST of Sgr030232 vs. ExPASy TrEMBL
Match: A0A6J1I2J7 (splicing factor U2af small subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111469321 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 4.3e-155
Identity = 283/329 (86.02%), Postives = 295/329 (89.67%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQGNPIDPRKIQ HFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQF+EEE
Sbjct: 61  GVDAQGNPIDPRKIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFQEEE 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180

Query: 181 RHELFAIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTS 240
           RHELFA Y RRR HSRSRSRSPYRH SYEER YGRHGHSRRYD+RDAYHDSR+RRHRSTS
Sbjct: 181 RHELFASYHRRRGHSRSRSRSPYRHRSYEERHYGRHGHSRRYDERDAYHDSRNRRHRSTS 240

Query: 241 PG------------------REGSEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSY 300
           PG                  RE SEERRAKIEQWN+E+E Q N NNAN DGN++S E SY
Sbjct: 241 PGHRGSRSRSPRGRKNRSPVREESEERRAKIEQWNREKE-QENYNNANSDGNEHSHEKSY 300

Query: 301 NGDVKYANQTCGY--EEQQQRQPPEQGYG 310
           NGDV+Y NQTCGY  ++QQQ+QPPEQGYG
Sbjct: 301 NGDVQYENQTCGYKQQQQQQQQPPEQGYG 328

[Close]

BLAST of Sgr030232 vs. TAIR 10
Match: AT1G27650.1 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 386.3 bits (991), Expect = 3.3e-107
Identity = 203/289 (70.24%), Postives = 229/289 (79.24%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVDAQG P+DPRKIQ HFE+F+EDLF+EL K+GEIESLN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61  GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
           QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 181 RHELFAIYRR-----RRSHSRSRSRSP------------YRHWSY--EERSYGRHGHSRR 240
           R +LF  YRR      RS SRSRS SP            +R +S+   +R + RHG  +R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240

Query: 241 YDDRDAYHD---SRSRRH----RSTSP--GREGSEERRAKIEQWNKERE 262
             +R    +   SR RR     R  SP  GREGSEERRA+IEQWN+ERE
Sbjct: 241 SSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNRERE 289

[Close]

BLAST of Sgr030232 vs. TAIR 10
Match: AT5G42820.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 386.0 bits (990), Expect = 4.3e-107
Identity = 203/280 (72.50%), Postives = 225/280 (80.36%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD QG P+DP KIQ HFE+FYED+F+ELNK+GE+ESLNVCDNLADHM+GNVYV F+EE+
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
            AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RHELFAIYR---RRRSHSRSRSRSPYRHWSY-EERSYG------RHGHSRRYDDRDAYHD 240
           R +LF  YR   RR S SRSRS SP R   +  ER  G      RHG+ +R  DR   HD
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 ---SRSRRH----RSTSPG--REGSEERRAKIEQWNKERE 262
                 RRH    RS SP   REGSEERRA+IEQWN+ER+
Sbjct: 241 RDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERD 280

[Close]

BLAST of Sgr030232 vs. TAIR 10
Match: AT5G42820.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 386.0 bits (990), Expect = 4.3e-107
Identity = 203/280 (72.50%), Postives = 225/280 (80.36%), Query Frame = 0


Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 61  GVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD QG P+DP KIQ HFE+FYED+F+ELNK+GE+ESLNVCDNLADHM+GNVYV F+EE+
Sbjct: 61  GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 121 QAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISREL 180
            AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 181 RHELFAIYR---RRRSHSRSRSRSPYRHWSY-EERSYG------RHGHSRRYDDRDAYHD 240
           R +LF  YR   RR S SRSRS SP R   +  ER  G      RHG+ +R  DR   HD
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240

Query: 241 ---SRSRRH----RSTSPG--REGSEERRAKIEQWNKERE 262
                 RRH    RS SP   REGSEERRA+IEQWN+ER+
Sbjct: 241 RDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERD 280

[Close]

BLAST of Sgr030232 vs. TAIR 10
Match: AT1G27650.2 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 282.7 bits (722), Expect = 5.1e-76
Identity = 156/239 (65.27%), Postives = 180/239 (75.31%), Query Frame = 0


Query: 51  MYQRPDMITPGVDAQGNPIDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVG 110
           MYQRPDMITPGVDAQG P+DPRKIQ HFE+F+EDLF+EL K+GEIESLN+CDNLADHM+G
Sbjct: 1   MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 60

Query: 111 NVYVQFREEEQAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNF 170
           NVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 61  NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 120

Query: 171 MHLKRISRELRHELFAIYRR-----RRSHSRSRSRSP------------YRHWSY--EER 230
           MH+K +SRELR +LF  YRR      RS SRSRS SP            +R +S+   +R
Sbjct: 121 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 180

Query: 231 SYGRHGHSRRYDDRDAYHD---SRSRRH----RSTSP--GREGSEERRAKIEQWNKERE 262
            + RHG  +R  +R    +   SR RR     R  SP  GREGSEERRA+IEQWN+ERE
Sbjct: 181 EFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNRERE 239

[Close]

BLAST of Sgr030232 vs. TAIR 10
Match: AT1G10320.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 122.9 bits (307), Expect = 6.7e-28
Identity = 93/307 (30.29%), Postives = 145/307 (47.23%), Query Frame = 0


Query: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNP 68
           FGTE+D+ +CPF+ K GACR G RCSR+H  P+ S TLL+ NMY  P  IT   D +G  
Sbjct: 237 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPG-ITWEQD-EGLE 296

Query: 69  IDPRKIQHHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRN 128
               + +  +EEFYED+  E  KYGE+ +  VC N + H+ GNVYV +R  E A  A ++
Sbjct: 297 YTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQS 356

Query: 129 LTGRFYAGRPIIVDFSPVTDFREATCRQYEEN---MCNRGGYCNFMHLKRISRELRHELF 188
           + GR++AG+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H  R          
Sbjct: 357 INGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFR---------- 416

Query: 189 AIYRRRRSHSRSRSRSPYRHWSYEERSYGRHGHSRRYDDRDAYHDSRSRRHRSTSPGREG 248
                         R P R W ++  S               Y D +   H S+    + 
Sbjct: 417 --NPGGDYEWADHDRPPPRFWIHKMTSL------------FGYSDEKHMEHESSGSLNDS 476

Query: 249 SEERRAKIEQWNKEREWQANDNNANFDGNKNSRENSYNGDVKYANQTCGYEEQQQRQPPE 308
             +      +    R    + ++AN     + R   Y+GD + + +     E + R+  E
Sbjct: 477 ISDLSTDSHRQPSRRSRSRDHDHANVGSTPSYRSRKYHGDTQDSTR-----EDKLRRHAE 512

Query: 309 QGYGGGD 313
             + G D
Sbjct: 537 NCHDGDD 512

The following BLAST results are available for this feature:

BLAST of Sgr030232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139466.1	3.5e-159	88.04	splicing factor U2af small subunit B [Cucumis sativus] >XP_011654262.1 splicing ...	[more]
XP_008461981.1	1.0e-158	88.04	PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo] >XP_00846198...	[more]
XP_023519661.1	8.5e-158	86.93	splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo] >XP_02351...	[more]
XP_022964867.1	7.2e-157	86.32	splicing factor U2af small subunit B-like [Cucurbita moschata] >XP_022964868.1 s...	[more]
XP_038894442.1	4.0e-155	87.12	splicing factor U2af small subunit B-like [Benincasa hispida] >XP_038894443.1 sp...	[more]

BLAST of Sgr030232 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S709	4.6e-106	70.24	Splicing factor U2af small subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF35A ...	[more]
Q9FMY5	6.0e-106	72.50	Splicing factor U2af small subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF35B ...	[more]
Q9ZQW8	3.0e-105	69.10	Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q6AUG0	6.4e-100	63.28	Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q01081	9.4e-67	58.26	Splicing factor U2AF 35 kDa subunit OS=Homo sapiens OX=9606 GN=U2AF1 PE=1 SV=3	[more]

BLAST of Sgr030232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVA4	1.7e-159	88.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145960 PE=4 SV=1	[more]
A0A1S3CFU2	4.9e-159	88.04	splicing factor U2af small subunit B-like OS=Cucumis melo OX=3656 GN=LOC10350045...	[more]
A0A5D3CV58	4.9e-159	88.04	Splicing factor U2af small subunit B-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1HM65	3.5e-157	86.32	splicing factor U2af small subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1I2J7	4.3e-155	86.02	splicing factor U2af small subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Sgr030232 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27650.1	3.3e-107	70.24	U2 snRNP auxiliary factor small subunit, putative	[more]
AT5G42820.2	4.3e-107	72.50	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G42820.1	4.3e-107	72.50	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G27650.2	5.1e-76	65.27	U2 snRNP auxiliary factor small subunit, putative	[more]
AT1G10320.1	6.7e-28	30.29	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009145	U2 auxiliary factor small subunit	PRINTS	PR01848	U2AUXFACTOR	coord: 18..37 score: 85.68 coord: 103..125 score: 65.42 coord: 165..177 score: 66.78 coord: 75..90 score: 50.28 coord: 130..154 score: 62.18 coord: 37..57 score: 57.14
IPR009145	U2 auxiliary factor small subunit	PANTHER	PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	coord: 1..291
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 45..142 e-value: 0.0027 score: 27.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 83..139 e-value: 1.7E-6 score: 27.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 44..146 score: 11.400568
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 148..174 e-value: 0.21 score: 20.6 coord: 13..39 e-value: 0.0065 score: 25.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 14..37 e-value: 7.9E-7 score: 28.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 148..175 score: 10.774557
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 12..40 score: 13.112443
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 73..142 e-value: 2.6E-5 score: 33.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 43..145 e-value: 1.0E-30 score: 108.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..261
None	No IPR available	PANTHER	PTHR12620:SF39	SPLICING FACTOR U2AF SMALL SUBUNIT A	coord: 1..291
None	No IPR available	CDD	cd12539	RRM_U2AF35B	coord: 44..145 e-value: 9.60406E-65 score: 201.824
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 32..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr030232.1	Sgr030232.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0089701	U2AF complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030628	pre-mRNA 3'-splice site binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding