Sgr030227 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr030227
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein .
Locationtig00153574: 1560988 .. 1561858 (-)
RNA-Seq ExpressionSgr030227
SyntenySgr030227
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTCAATTACCCTCAGATCGTCGTGTCTGCGAGCAATTTGTAGAATATCGACCAGTTCCGCCACCAGAAATGTCTCCGTTCAATCGGTGCTTCCTTCCGTGCGCTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTGAGGTGCTGCCTGCTTCTTTAGATTCATCTTCCTGTTTCGAAGTTACTTTTCATTCTGATTTGATGTTTTAGGTTGTTGCGACGAGAATTGAGTTCTCTTCGACCCGTTCACAGTGCAATTGCATCCGCTTGCCTTGTTTCTGAGCTGCCCGCCGAACCCAGCGCCTCGGTAGAAGGTTAGTCCTCTTCTGTTTCTTGCTTCCTACTCAGTGCTGTTGTTTTTGAGTTGGTTTCATTCGCATCAAATTTGAGTAGTACAAGTACTCAACTCTCTTAATTACAGATATAGTTTCTTAGAATATATGCAGGTGCAGCCAAATAATTTTAGGCTGGGTGTCTGATTCTGTTGGAACTCTGTAACCTATTCTAAGAGAAGTCCATAGCTAGCCGATTAAAATTGATTTCCTTAATACCTTACTTCTGTTCGGTTAGCTGAAATGCTGAATTTCATCTTTCATCTTTGGTATTTTCAATTTGTATGTTATTTCGATCCATCAAATATGGTTGCGATGCAGATACGAAAAAGGGCAAGAGACGCATTGTTCAGTTGTGAGTTTTATATGGGAAGTTGGGAGCTTTCTGGATTAGGGTGTGTTGTCTACAAGCTAACCATGATTATGTTTAGCGACCTGGATATGAGAGAATTATGCCCTGCAAAATGTTTATCATGTATTGAATATGGACCAAACGACAGGGAAGTGGTTCAATGCTGGTGA

mRNA sequence

ATGGCAGCTTCAATTACCCTCAGATCGTCGTGTCTGCGAGCAATTTGTAGAATATCGACCAGTTCCGCCACCAGAAATGTCTCCGTTCAATCGGTGCTTCCTTCCGTGCGCTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTGAGGTTGTTGCGACGAGAATTGAGTTCTCTTCGACCCGTTCACAGTGCAATTGCATCCGCTTGCCTTGTTTCTGAGCTGCCCGCCGAACCCAGCGCCTCGGTAGAAGCTGAAATGCTGAATTTCATCTTTCATCTTTGGTATTTTCAATTTGTATGTTATTTCGATCCATCAAATATGGTTGCGATGCAGATACGAAAAAGGGCAAGAGACGCATTGTTCAGTTGTGAGTTTTATATGGGAAGTTGGGAGCTTTCTGGATTAGGGTGTGTTGTCTACAAGCTAACCATGATTATGTTTAGCGACCTGGATATGAGAGAATTATGCCCTGCAAAATGTTTATCATGTATTGAATATGGACCAAACGACAGGGAAGTGGTTCAATGCTGGTGA

Coding sequence (CDS)

ATGGCAGCTTCAATTACCCTCAGATCGTCGTGTCTGCGAGCAATTTGTAGAATATCGACCAGTTCCGCCACCAGAAATGTCTCCGTTCAATCGGTGCTTCCTTCCGTGCGCTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTGAGGTTGTTGCGACGAGAATTGAGTTCTCTTCGACCCGTTCACAGTGCAATTGCATCCGCTTGCCTTGTTTCTGAGCTGCCCGCCGAACCCAGCGCCTCGGTAGAAGCTGAAATGCTGAATTTCATCTTTCATCTTTGGTATTTTCAATTTGTATGTTATTTCGATCCATCAAATATGGTTGCGATGCAGATACGAAAAAGGGCAAGAGACGCATTGTTCAGTTGTGAGTTTTATATGGGAAGTTGGGAGCTTTCTGGATTAGGGTGTGTTGTCTACAAGCTAACCATGATTATGTTTAGCGACCTGGATATGAGAGAATTATGCCCTGCAAAATGTTTATCATGTATTGAATATGGACCAAACGACAGGGAAGTGGTTCAATGCTGGTGA

Protein sequence

MAASITLRSSCLRAICRISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEPSASVEAEMLNFIFHLWYFQFVCYFDPSNMVAMQIRKRARDALFSCEFYMGSWELSGLGCVVYKLTMIMFSDLDMRELCPAKCLSCIEYGPNDREVVQCW
Homology
BLAST of Sgr030227 vs. NCBI nr
Match: XP_022937479.1 (uncharacterized protein LOC111443881 [Cucurbita moschata] >XP_023536895.1 uncharacterized protein LOC111798142 [Cucurbita pepo subsp. pepo] >KAG6585998.1 hypothetical protein SDJN03_18731, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020788.1 hypothetical protein SDJN02_17476 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.6 bits (340), Expect = 4.3e-28
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICRISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRELS 60
          MAAS+ LRSSCLRAI RIST SA RNVSV SVLPSVRSSFVS R SISPH LRLLRRELS
Sbjct: 1  MAASVALRSSCLRAISRISTGSAARNVSVSSVLPSVRSSFVSRRISISPHSLRLLRRELS 60

Query: 61 SLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          SLRP+HSAIASACLVSELPAE SASV+   +N++
Sbjct: 61 SLRPIHSAIASACLVSELPAEASASVQGRFVNYL 94

BLAST of Sgr030227 vs. NCBI nr
Match: XP_022152888.1 (uncharacterized protein LOC111020511 [Momordica charantia])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-27
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = 0

Query: 2  AASITLRSSCLRAICRISTSSATRNVSVQSVLPSVRSSFVSPRTSISP-HPLRLLRRELS 61
          +AS+ LRSSCLRAICRISTSSA RNVSV SVLPS+RSSFV  RTSISP H LRLLRRELS
Sbjct: 4  SASVALRSSCLRAICRISTSSAARNVSVSSVLPSLRSSFVPRRTSISPTHSLRLLRRELS 63

Query: 62 SLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          SLRPVHSAIASACLVSELPAE SASVE   +N++
Sbjct: 64 SLRPVHSAIASACLVSELPAEASASVEGRFVNYL 97

BLAST of Sgr030227 vs. NCBI nr
Match: XP_022969556.1 (uncharacterized protein LOC111468540 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-27
Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICRISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRELS 60
          MAAS+ LRSSCLRAI RIST+S+ RNVSV S LPSVRSSFVS R SISPH LRLLRRELS
Sbjct: 1  MAASVALRSSCLRAISRISTASSARNVSVSSALPSVRSSFVSRRISISPHSLRLLRRELS 60

Query: 61 SLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          SLRP+HSAIASACLVSELPAE SASV+   +N++
Sbjct: 61 SLRPIHSAIASACLVSELPAEASASVQGRFVNYL 94

BLAST of Sgr030227 vs. NCBI nr
Match: XP_030957939.1 (uncharacterized protein LOC115979952 [Quercus lobata])

HSP 1 Score: 85.5 bits (210), Expect = 5.1e-13
Identity = 56/96 (58.33%), Postives = 67/96 (69.79%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICR--ISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRE 60
          MAAS+  RS+ +RA CR  +S SSATR  S    LP   S+FV  R+  S  PLRLLRRE
Sbjct: 1  MAASVAGRSTLVRAFCRASMSPSSATRRFS----LPPRMSNFVPHRSPTSSPPLRLLRRE 60

Query: 61 LSSLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          LSSL+PVHSAIASACLVS+LP+E S S E    N++
Sbjct: 61 LSSLQPVHSAIASACLVSKLPSEASTSTEGRFANYL 92

BLAST of Sgr030227 vs. NCBI nr
Match: XP_023912928.1 (uncharacterized protein LOC112024538 [Quercus suber])

HSP 1 Score: 85.5 bits (210), Expect = 5.1e-13
Identity = 56/96 (58.33%), Postives = 66/96 (68.75%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICR--ISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRE 60
          MAAS+  RS+ +RA CR  +S SSATR  S    LP   S+FV  R+  S  PLRLLRRE
Sbjct: 1  MAASVAGRSTLVRAFCRASMSPSSATRRFS----LPPCTSNFVPHRSPTSSPPLRLLRRE 60

Query: 61 LSSLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          LSSL+PVHSAIASACLVS+LP E S S E    N++
Sbjct: 61 LSSLQPVHSAIASACLVSKLPREASTSTEGRFANYL 92

BLAST of Sgr030227 vs. ExPASy TrEMBL
Match: A0A6J1FBA6 (uncharacterized protein LOC111443881 OS=Cucurbita moschata OX=3662 GN=LOC111443881 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICRISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRELS 60
          MAAS+ LRSSCLRAI RIST SA RNVSV SVLPSVRSSFVS R SISPH LRLLRRELS
Sbjct: 1  MAASVALRSSCLRAISRISTGSAARNVSVSSVLPSVRSSFVSRRISISPHSLRLLRRELS 60

Query: 61 SLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          SLRP+HSAIASACLVSELPAE SASV+   +N++
Sbjct: 61 SLRPIHSAIASACLVSELPAEASASVQGRFVNYL 94

BLAST of Sgr030227 vs. ExPASy TrEMBL
Match: A0A6J1DG34 (uncharacterized protein LOC111020511 OS=Momordica charantia OX=3673 GN=LOC111020511 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.1e-28
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = 0

Query: 2  AASITLRSSCLRAICRISTSSATRNVSVQSVLPSVRSSFVSPRTSISP-HPLRLLRRELS 61
          +AS+ LRSSCLRAICRISTSSA RNVSV SVLPS+RSSFV  RTSISP H LRLLRRELS
Sbjct: 4  SASVALRSSCLRAICRISTSSAARNVSVSSVLPSLRSSFVPRRTSISPTHSLRLLRRELS 63

Query: 62 SLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          SLRPVHSAIASACLVSELPAE SASVE   +N++
Sbjct: 64 SLRPVHSAIASACLVSELPAEASASVEGRFVNYL 97

BLAST of Sgr030227 vs. ExPASy TrEMBL
Match: A0A6J1HY48 (uncharacterized protein LOC111468540 OS=Cucurbita maxima OX=3661 GN=LOC111468540 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-27
Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICRISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRELS 60
          MAAS+ LRSSCLRAI RIST+S+ RNVSV S LPSVRSSFVS R SISPH LRLLRRELS
Sbjct: 1  MAASVALRSSCLRAISRISTASSARNVSVSSALPSVRSSFVSRRISISPHSLRLLRRELS 60

Query: 61 SLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          SLRP+HSAIASACLVSELPAE SASV+   +N++
Sbjct: 61 SLRPIHSAIASACLVSELPAEASASVQGRFVNYL 94

BLAST of Sgr030227 vs. ExPASy TrEMBL
Match: A0A2N9FKA7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15372 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 59/92 (64.13%), Postives = 67/92 (72.83%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICRIST--SSATRNVSVQSVLPSVRSSFVSPRTSI-SPHPLRLLRR 60
          MAAS+  RS  +RA+CR ST  SSATR  S    LPS  S+FV  R+ I SP PLRLLRR
Sbjct: 1  MAASVAGRSILVRALCRASTNSSSATRRFS----LPSRSSNFVPHRSPIPSPSPLRLLRR 60

Query: 61 ELSSLRPVHSAIASACLVSELPAEPSASVEAE 90
          ELSSL+PVHS IASACLVS+LP+E S S E E
Sbjct: 61 ELSSLQPVHSVIASACLVSKLPSEASTSTEVE 88

BLAST of Sgr030227 vs. ExPASy TrEMBL
Match: A0A7N2KM76 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-12
Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 1  MAASITLRSSCLRAICR--ISTSSATRNVSVQSVLPSVRSSFVSPRTSISPHPLRLLRRE 60
          MAAS+  RS+ +RA CR  +S SSATR  S    LP   S+FV  R+  S  PLRLLRRE
Sbjct: 1  MAASVAGRSTLVRAFCRASMSPSSATRRFS----LPPRMSNFVPHRSPTSSPPLRLLRRE 60

Query: 61 LSSLRPVHSAIASACLVSELPAEPSASVEAEML 92
          LSSL+PVHSAIASACLVS+LP+E S S E  ++
Sbjct: 61 LSSLQPVHSAIASACLVSKLPSEASTSTEGTLM 89

BLAST of Sgr030227 vs. TAIR 10
Match: AT2G27775.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 7.2e-05
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 0

Query: 3  ASITLRSSCLRAICRISTSSATRNVSVQSVLPSV-RSSFVSPR----TSISPHPLRLLRR 62
          A+I + S     +  I+ ++  RN+      PSV   +F SPR    + I     RLLRR
Sbjct: 2  AAIGIASRSATFMRSINRTATARNLISSRARPSVPNPNFTSPRFNTSSRIEGSVPRLLRR 61

Query: 63 ELSSLRPVHSAIASACLVSELPAEPSASVEAEMLNFI 95
          ELS+ +P HS IA+ACLVS+LP++ + S E    N++
Sbjct: 62 ELSTQQPFHSTIAAACLVSKLPSDVT-SPEGRFANYL 97

BLAST of Sgr030227 vs. TAIR 10
Match: AT2G27775.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 0

Query: 3   ASITLRSSCLRAICRISTSSATRNVSVQSVLPSV-RSSFVSPR----TSISPHPLRLLRR 62
           A+I + S     +  I+ ++  RN+      PSV   +F SPR    + I     RLLRR
Sbjct: 2   AAIGIASRSATFMRSINRTATARNLISSRARPSVPNPNFTSPRFNTSSRIEGSVPRLLRR 61

Query: 63  ELSSLRPVHSAIASACLVSELPAE---PSASVEAEMLNFI 95
           ELS+ +P HS IA+ACLVS+LP++   P  +    ++ F+
Sbjct: 62  ELSTQQPFHSTIAAACLVSKLPSDVTSPEGNNSKNLVRFV 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022937479.14.3e-2880.85uncharacterized protein LOC111443881 [Cucurbita moschata] >XP_023536895.1 unchar... [more]
XP_022152888.11.3e-2781.91uncharacterized protein LOC111020511 [Momordica charantia][more]
XP_022969556.12.2e-2778.72uncharacterized protein LOC111468540 [Cucurbita maxima][more]
XP_030957939.15.1e-1358.33uncharacterized protein LOC115979952 [Quercus lobata][more]
XP_023912928.15.1e-1358.33uncharacterized protein LOC112024538 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FBA62.1e-2880.85uncharacterized protein LOC111443881 OS=Cucurbita moschata OX=3662 GN=LOC1114438... [more]
A0A6J1DG346.1e-2881.91uncharacterized protein LOC111020511 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1HY481.0e-2778.72uncharacterized protein LOC111468540 OS=Cucurbita maxima OX=3661 GN=LOC111468540... [more]
A0A2N9FKA71.5e-1364.13Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15372 PE=4 SV=1[more]
A0A7N2KM761.2e-1259.14Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G27775.17.2e-0538.14FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT2G27775.21.2e-0436.00FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr030227.1Sgr030227.1mRNA