Sgr030187 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr030187
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	tig00153574: 1134800 .. 1135093 (+)
RNA-Seq Expression	Sgr030187
Synteny	Sgr030187

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGAAGCTTCAGCAGTCCGAAGCCGGAGTCGACACCGCAAGATCTATCGCTGGCGGTGTCTGACTCGGTGGCTCGAACGCCAGATGGCGGCGGAGAAGCTACGACGGCGGCCATGGTGCTGCTGGGCTGCACCCGGTGCCTCATGTACGTGATGTCGTCTAAGTTAGATCTCAAGTGTCCCATATGCAACAACGCCACCCTGCTTGATTTCTTCAATTTGGTAGAACAGGCGTCTCGGAGAAATGCTATCGACATGTCGTCGACCGATGCTTCTTCCACCGGCAAATGA

mRNA sequence

ATGGGTCGAAGCTTCAGCAGTCCGAAGCCGGAGTCGACACCGCAAGATCTATCGCTGGCGGTGTCTGACTCGGTGGCTCGAACGCCAGATGGCGGCGGAGAAGCTACGACGGCGGCCATGGTGCTGCTGGGCTGCACCCGGTGCCTCATGTACGTGATGTCGTCTAAGTTAGATCTCAAGTGTCCCATATGCAACAACGCCACCCTGCTTGATTTCTTCAATTTGGTAGAACAGGCGTCTCGGAGAAATGCTATCGACATGTCGTCGACCGATGCTTCTTCCACCGGCAAATGA

Coding sequence (CDS)

ATGGGTCGAAGCTTCAGCAGTCCGAAGCCGGAGTCGACACCGCAAGATCTATCGCTGGCGGTGTCTGACTCGGTGGCTCGAACGCCAGATGGCGGCGGAGAAGCTACGACGGCGGCCATGGTGCTGCTGGGCTGCACCCGGTGCCTCATGTACGTGATGTCGTCTAAGTTAGATCTCAAGTGTCCCATATGCAACAACGCCACCCTGCTTGATTTCTTCAATTTGGTAGAACAGGCGTCTCGGAGAAATGCTATCGACATGTCGTCGACCGATGCTTCTTCCACCGGCAAATGA

Protein sequence

MGRSFSSPKPESTPQDLSLAVSDSVARTPDGGGEATTAAMVLLGCTRCLMYVMSSKLDLKCPICNNATLLDFFNLVEQASRRNAIDMSSTDASSTGK

Homology

[Close]

BLAST of Sgr030187 vs. NCBI nr
Match: KAG6583700.1 (hypothetical protein SDJN03_19632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019351.1 hypothetical protein SDJN02_18311 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.8 bits (216), Expect = 5.6e-14
Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 11 ESTPQDLSLAVSDSVARTPDGGGEATTAAMVLLGCTRCLMYVMSSKLDLKCPICNNATLL 70
          ++  +  S+ V  S ++T D    ATT+ MVLLGCT+CLMYVMSSK DLKCP CNN TLL
Sbjct: 5  DAAARSCSIFVERSSSKTED----ATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLL 64

Query: 71 DFFNLVEQASRRNAIDMS 89
          D  NL  QAS++N +DMS
Sbjct: 65 DVHNLANQASKKNLVDMS 78

[Close]

BLAST of Sgr030187 vs. NCBI nr
Match: TQD98842.1 (hypothetical protein C1H46_015485 [Malus baccata])

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-06
Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 7   SPKPESTPQDLSLAVSDSVARTPDGG-----GEATTAAMVLLGCTRCLMYVMSSKLDLKC 66
           SP    T  D+S+  S  V+  PD             AMVL GC RCLMYVM S++D KC
Sbjct: 30  SPTASETSSDMSIDHSSCVSSEPDDQTMHYLSRPEAKAMVLAGCPRCLMYVMLSEVDPKC 89

Query: 67  PICNNATLLDFFNLVEQASRR 83
           P C ++ LLDFF+  E++S+R
Sbjct: 90  PKCKSSVLLDFFS--EESSKR 108

[Close]

BLAST of Sgr030187 vs. NCBI nr
Match: XP_004506211.1 (uncharacterized protein LOC101502581 [Cicer arietinum])

HSP 1 Score: 60.5 bits (145), Expect = 9.5e-06
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 0


Query: 1   MGRSFSSPKPESTPQDLSLAVSDSVARTPDGG------------GEATTAAMVLLGCTRC 60
           +G S S P+  ++ +   ++     + +   G            G   T AM+L+GCTRC
Sbjct: 12  VGLSLSPPRVTTSSKSADVSTESPTSSSSTSGIHSSEGSCVSCDGPEVTKAMLLVGCTRC 71

Query: 61  LMYVMSSKLDLKCPICNNATLLDFFNLVEQASRRNAI 86
           LMYVM  ++D KCP C +  LLDF N  E  S++ +I
Sbjct: 72  LMYVMLPEIDPKCPKCKSTVLLDFLNNEENTSKKTSI 108

[Close]

BLAST of Sgr030187 vs. NCBI nr
Match: TYH76956.1 (hypothetical protein ES332_D04G121400v1 [Gossypium tomentosum])

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-05
Identity = 34/65 (52.31%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 10 PESTPQDLSLAVSDSVARTPDGGGEATTAAMVLLGCTRCLMYVMSSKLDLKCPICNNATL 69
          P S P   S  VS  +        EATT +MVLLGC RCLMYVM S+ D KCP C +  L
Sbjct: 35 PTSPP---SSCVSSEMEYDTGSSSEATTTSMVLLGCPRCLMYVMLSEDDPKCPKCKSTVL 94

Query: 70 LDFFN 75
          LDF N
Sbjct: 95 LDFLN 96

[Close]

BLAST of Sgr030187 vs. NCBI nr
Match: TQD98843.1 (hypothetical protein C1H46_015486 [Malus baccata])

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05
Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 7   SPKPESTPQDLSLAVSDSVARTPDGG-----GEATTAAMVLLGCTRCLMYVMSSKLDLKC 66
           SP    T  D+S+  S  V+  PD             AMVL GC RCLMYVM S++D KC
Sbjct: 119 SPTASETSSDMSIDHSSCVSSEPDDQTMHYLSRPEAKAMVLAGCPRCLMYVMLSEVDPKC 178

Query: 67  PICNNATLLDFFNLVEQASR 82
           P C ++ LLDFF+  E++S+
Sbjct: 179 PKCKSSVLLDFFS--EESSK 196

[Close]

BLAST of Sgr030187 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.4e-06
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 37  TAAMVLLGCTRCLMYVMSSKLDLKCPICNNATLLDFFNLVEQASRRNAIDMSSTDASSTG 96
           T +MVL+GC RCLMYVM S+ D KCP C +  LLDF  L E A+  NA    +  A+S+G
Sbjct: 63  TTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDF--LHENATNANA----NAAAASSG 117

Query: 97  K 98
           +
Sbjct: 123 R 117

[Close]

BLAST of Sgr030187 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.9e-05
Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 36  TTAAMVLLGCTRCLMYVMSSKLDLKCPICNNATLLDFFNLVEQASRRNAIDMSSTDASST 95
           T  +MVL+GC RCLMYVM S  D KCP C +  LLDF        + NA   ++  A++T
Sbjct: 56  TITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFL-------QENAFAATTATAANT 108

[Close]

BLAST of Sgr030187 vs. ExPASy TrEMBL
Match: A0A540MKW5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_015485 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-06
Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 7   SPKPESTPQDLSLAVSDSVARTPDGG-----GEATTAAMVLLGCTRCLMYVMSSKLDLKC 66
           SP    T  D+S+  S  V+  PD             AMVL GC RCLMYVM S++D KC
Sbjct: 30  SPTASETSSDMSIDHSSCVSSEPDDQTMHYLSRPEAKAMVLAGCPRCLMYVMLSEVDPKC 89

Query: 67  PICNNATLLDFFNLVEQASRR 83
           P C ++ LLDFF+  E++S+R
Sbjct: 90  PKCKSSVLLDFFS--EESSKR 108

[Close]

BLAST of Sgr030187 vs. ExPASy TrEMBL
Match: A0A1S2YKZ1 (uncharacterized protein LOC101502581 OS=Cicer arietinum OX=3827 GN=LOC101502581 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.6e-06
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 0


Query: 1   MGRSFSSPKPESTPQDLSLAVSDSVARTPDGG------------GEATTAAMVLLGCTRC 60
           +G S S P+  ++ +   ++     + +   G            G   T AM+L+GCTRC
Sbjct: 12  VGLSLSPPRVTTSSKSADVSTESPTSSSSTSGIHSSEGSCVSCDGPEVTKAMLLVGCTRC 71

Query: 61  LMYVMSSKLDLKCPICNNATLLDFFNLVEQASRRNAI 86
           LMYVM  ++D KCP C +  LLDF N  E  S++ +I
Sbjct: 72  LMYVMLPEIDPKCPKCKSTVLLDFLNNEENTSKKTSI 108

[Close]

BLAST of Sgr030187 vs. ExPASy TrEMBL
Match: A0A5D2LD87 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D04G121400v1 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.0e-06
Identity = 34/65 (52.31%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 10 PESTPQDLSLAVSDSVARTPDGGGEATTAAMVLLGCTRCLMYVMSSKLDLKCPICNNATL 69
          P S P   S  VS  +        EATT +MVLLGC RCLMYVM S+ D KCP C +  L
Sbjct: 35 PTSPP---SSCVSSEMEYDTGSSSEATTTSMVLLGCPRCLMYVMLSEDDPKCPKCKSTVL 94

Query: 70 LDFFN 75
          LDF N
Sbjct: 95 LDFLN 96

[Close]

BLAST of Sgr030187 vs. ExPASy TrEMBL
Match: A0A540MJ79 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_015486 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.8e-06
Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 7   SPKPESTPQDLSLAVSDSVARTPDGG-----GEATTAAMVLLGCTRCLMYVMSSKLDLKC 66
           SP    T  D+S+  S  V+  PD             AMVL GC RCLMYVM S++D KC
Sbjct: 119 SPTASETSSDMSIDHSSCVSSEPDDQTMHYLSRPEAKAMVLAGCPRCLMYVMLSEVDPKC 178

Query: 67  PICNNATLLDFFNLVEQASR 82
           P C ++ LLDFF+  E++S+
Sbjct: 179 PKCKSSVLLDFFS--EESSK 196

[Close]

BLAST of Sgr030187 vs. ExPASy TrEMBL
Match: A0A5J5RUL1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G111100v1 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-05
Identity = 33/65 (50.77%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 10 PESTPQDLSLAVSDSVARTPDGGGEATTAAMVLLGCTRCLMYVMSSKLDLKCPICNNATL 69
          P S P   S  VS  +        EATT +MVL+GC RCLMYVM S+ D KCP C +  L
Sbjct: 35 PTSPP---SACVSSEMEDDTGSSSEATTTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVL 94

Query: 70 LDFFN 75
          LDF N
Sbjct: 95 LDFLN 96

[Close]

BLAST of Sgr030187 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 37  TAAMVLLGCTRCLMYVMSSKLDLKCPICNNATLLDFFNLVEQASRRNAIDMSSTDASSTG 96
           T +MVL+GC RCLMYVM S+ D KCP C +  LLDF  L E A+  NA    +  A+S+G
Sbjct: 63  TTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDF--LHENATNANA----NAAAASSG 117

Query: 97  K 98
           +
Sbjct: 123 R 117

[Close]

BLAST of Sgr030187 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06
Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 36  TTAAMVLLGCTRCLMYVMSSKLDLKCPICNNATLLDFFNLVEQASRRNAIDMSSTDASST 95
           T  +MVL+GC RCLMYVM S  D KCP C +  LLDF        + NA   ++  A++T
Sbjct: 56  TITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFL-------QENAFAATTATAANT 108

[Close]

BLAST of Sgr030187 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04
Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 7  SPKPESTPQDLSLAVSDSVARTPDGGGEATTAAMVLLGCTRCLMYVMSS-KLDLKCPICN 66
          SP  +S+    S + S        GGGEA   +MV++GC  C+MY+++S + D +CP CN
Sbjct: 18 SPSLDSSLLTESSSSSLCSEEAEGGGGEA--KSMVVVGCPNCIMYIITSLENDPRCPRCN 77

Query: 67 NATLLDF 73
          +  LLDF
Sbjct: 78 SHVLLDF 82

The following BLAST results are available for this feature:

BLAST of Sgr030187 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583700.1	5.6e-14	57.69	hypothetical protein SDJN03_19632, partial [Cucurbita argyrosperma subsp. sorori...	[more]
TQD98842.1	4.3e-06	44.44	hypothetical protein C1H46_015485 [Malus baccata]	[more]
XP_004506211.1	9.5e-06	34.02	uncharacterized protein LOC101502581 [Cicer arietinum]	[more]
TYH76956.1	1.2e-05	52.31	hypothetical protein ES332_D04G121400v1 [Gossypium tomentosum]	[more]
TQD98843.1	1.6e-05	43.75	hypothetical protein C1H46_015486 [Malus baccata]	[more]

BLAST of Sgr030187 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	3.4e-06	50.82	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	4.9e-05	45.00	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]

BLAST of Sgr030187 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A540MKW5	2.1e-06	44.44	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_015485 PE=4 SV=1	[more]
A0A1S2YKZ1	4.6e-06	34.02	uncharacterized protein LOC101502581 OS=Cicer arietinum OX=3827 GN=LOC101502581 ...	[more]
A0A5D2LD87	6.0e-06	52.31	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D04G121400v1 P...	[more]
A0A540MJ79	7.8e-06	43.75	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_015486 PE=4 SV=1	[more]
A0A5J5RUL1	1.0e-05	50.77	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G111100v1 PE...	[more]

BLAST of Sgr030187 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	2.4e-07	50.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	3.5e-06	45.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	1.1e-04	40.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33177:SF48	SUBFAMILY NOT NAMED	coord: 26..89
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 26..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr030187.1	Sgr030187.1	mRNA