Sgr030021 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr030021
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153554: 2198671 .. 2202112 (-)
RNA-Seq Expression	Sgr030021
Synteny	Sgr030021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTGCAAGAGCTAATTTCGTTGCCTGGAAGGTGGTCTTCTTTGCTTTGCTTCTCCTTGCTTTCGTTGTTTCTGCGAGGGAACTTGCTGGGACCAACGTGGTGGCTCGCATAGCCCGTAAGTCTTCTCTTCCCATAATTCCTTCTTTAGATCACTTCACAAGTAAAAGAATATTTCCATCGAAAACAGAGAACAATGTTTTTCAAATCCTAGAGGGGGAGTGAAGAAGGAAGGGAGGCAATGCTCTCTCTTAATCGGAGAAAGAAGTATTCAAAAGTTTTTTTTTTTTAATTTGTTCTTTTAAATTTTTAGAATATTGAAAGATTATATATATATATATATAGATTTAGAACATAAAATATTGCTTCGACCTTATAAAAATTAAGCTCCGCCCTTATCAAACCCTCTATTTTTTTCCAATAGGTGAGACCGCGAAGGAGACGAATGGTGTGAAGGGCAGGAGATTAAGTATCGACGAGAGTTGGATAAAGTTTGGAAGGGAAACTATTATAGACCTCCTCCTCGTTCTCCCCCTCTTTAACGCAGCCCACAGAGTTGAATTATTTGCTGTTATTATTATTTAGTTGTGGGTTATAACACAGAATTAAAATATATGGTTGAGCTTTGTAAAACCAAGAGAGATGTTATTTATATTTTTTACACAAGTCTATAATAAATACATTTTTACTCTTGGATTTCAGTGATATCAATGAATAATATTCAGTTCTTTACTTCTTCTTCACATATCTTTAGATTTGGTCCTCCTCCCAAAGGGCAAGTCTTGAATGTTTGTATATTTTCTTTAATTACCTTTCTCTGGCGTTTCGTGTGTATTGTTGAATTTGGATTATAAGGATCTCCATAAATAAGTTTATGAATGTATCTTTAGTTAATAGATTTGCCATACTTACCATATCATTAAAATAAAAATGTCATATTTTAGAATTTGTTATTAATGCAATTTGAATTCTCGACTTTACCCAGAAAGCCCATAGTGTGACTTTTATAAAAAAAAACAGTCTAGGAGTGGAACTTTTCTAAAAGGATATCTCTATTCCACTCTTGTAATCATCCTGCACGAAACTTCAACTATTAAGGCAATAGTTACCTTCTTCATAGGTTGAAGGTATGAATCTCTACCACACATTTGTATTGCTATATTTTCTCTAAAAAAAAAAAAAATCACCATTGTGCACCTATATCTTCAAATAGAAATAGCGATTTGATTTTTATTAAGAGTAAAAATTTAATAGAAAACATGTCATTAGTGAAAGATTAAGGCATTTGTATCATTAGTCATATTTAATTTATTATTATTTGTATTCTAAAATTATATGGAAAATAAAATGAGGCTTTTTAATATAGGAAACCTTAGTATTTCCTCACATGTCTGCCTCTGTGTATCTTAAGTCAGCTTTTTGGAAGTTGGTTTTGACTGTATAATCCTTAAAAAAAAAAAAAAAACGTATTTTCCCATCTTCTTTGTTAGGTTTTATTTTACTTAAAAAAAATTATTTCTTTTAGAAGCTTCTTTGTTAAGTTATATGTTCTCTTTTTCTACTAAATTATTTACTAGCTTTAGTTGAATTTATGTTTGATCAATAGCTCTCATTCACCTTTCTCATCTCTAATTAAGAAAGTAGTTCTCACAATTATTCTTTATTATATAACCTATGAGGCCACGGCAAATAACAAATAAACTTCTGAAAGGTAATTTTTCTTTGAATTGTTTCCTCCCACCAAACCTTCTCCCAACTTTTCAATCATATCTATGTTCAAATCTTACCTTTCTGTTAAGTTTTTTAAATTCGTTTCACGACTTTGTCAAAATGAACCCCTTCTCCAAGAAAAATAAAATAAAATAAAAAAACCATGCCCATCGAATAAGACCTTTTATTTTATTTCATATATATATGAGTTTAAGACCTTTTCTTTTTTAAAATATACTTTCTCTGCTCTAAACATAGAGATGAAGAGATTGTCCCCGATATTCACTATTTTCACCTTAGAATAACATTCTTTTGAAGAGACGACATCTTCCCAACCAACCAAAATCTCCAATTTTGAACAAAAAATCTGTATTTTGACAAGAGAGGCTTCCATGATGATTTTTTAGGAGAAAACCCAAAACAAAGGGTACAAATAATGCCATATTGATGAGGAAAAGTTTGAAAAAACTGAATGAAAATTCAATTTGAAAATATCATTATCATAGAGTTTTTTTTTTTTTTTCATATATAGATAGTGTTATTTGAAAAAGTAATGATTAAAATAGGCTGGTTTAAAAAATAATGACAAAACTATGGTAGTTTTTTTTGTGAAGTTCATAATCATGATTTTTAAATACAATTTATTAGGTCGTCCAAGATTGTGGTTTTTTAAACATAAGACTTAGTATGATTTACATAAAGTCTTGTCTTGTGACACATAATAAAATTGTATGTACTAGATGCAATTTAACTTGAACAAATCATGTATTTTAGTAACGTATATTTCATCTTTACTTGAAAATCTATTCAATTTTTTTTTTTTTACCCAACTTAAACTTGATCTTATATAGTCAATTTAGAGCCCTAGCTTATCATCTCTCTTTGCAAGTCCACAAAATAAATATTAAGGAAGAAAATTGTTAACATCCCATGATGACATGAACATTTTTAAAGAAGTTTTTAAAATAGTAAGAATCAAATGACTAGACTGATAACTTAATCCCTAAGTTAGCATGCTTTTGGTTTTGTTTATGATTTCCTTTTTTGGATAAACTTCAACGTTTACCACTTTTAAACGTGTTGTTTTGGTCCTAACATACCAATCTCATGCAAAACCCCACAATTTGTCAACAGATCGAAGATGACAATACAAAGAAAGAAGCCGAAAGATATTTTATTTTGCCCGACTTCTTTGACCCTAGAGCTGCACAAGTTGACAGAGACAAATGATAGCTAGCTAAACAAGTGCTCACAGCCGCAGGACAAGAGAACCTCAAACAAGTCTTCTCTGTAACCACCCCTTTTCTTCAAGATCATATTCGACTCTTGTCCCCTTGAAAGTGAAGCCCTCTACTACTCTGAGCTTGAGCTTTCTGCAAACAAAATGGCTTCCACAAGAGCTTTCGCTGCCTGGAAGGTTGTCTTCTTTGCTTTGCTTCTTCTTGCTTTCGACGTTTCTGCGAGAGAACTTGTTGGAACCAATGTAGTGGCTCGCACGGCTCGCACAGCTCGTAAGTTTTCTGTTTCCCATGATGCCTTTTTAGATCACTTGAGAAACAAATTTAAAAACATTGTTTTTCAGAATAGCTTTCAACCCTTTGAAAGTTTTTTCTCAACAGGTGAGATGGCGGTGGAGATGAATGGTGTAATGGGCATGAGATTAGTTAGTCAAGTGCAGGATTCCCCTTGGAAGGGAAGCTACCATCCTCCCCGCTGGGACAAGCCTTGA

mRNA sequence

ATGGCTTCTGCAAGAGCTAATTTCGTTGCCTGGAAGGTGGTCTTCTTTGCTTTGCTTCTCCTTGCTTTCGTTGTTTCTGCGAGGGAACTTGCTGGGACCAACGTGGTGGCTCGCATAGCCCGTGAGACCGCGAAGGAGACGAATGGTGTGAAGGGCAGGAGATTAAGTATCGACGAGAGTTGGATAAAGTTTGGAAGGGAAACTATTATAGACCTCCTCCTCGTTCTCCCCCTCTTTAACGCAGCCCACAGAGTTGAATTATTTGCTATCATATTCGACTCTTGTCCCCTTGAAAGTGAAGCCCTCTACTACTCTGAGCTTGAGCTTTCTGCAAACAAAATGGCTTCCACAAGAGCTTTCGCTGCCTGGAAGGTTGTCTTCTTTGCTTTGCTTCTTCTTGCTTTCGACGTTTCTGCGAGAGAACTTGTTGGAACCAATGTAGTGGCTCGCACGGCTCGCACAGCTCGTGAGATGGCGGTGGAGATGAATGGTGTAATGGGCATGAGATTAGTTAGTCAAGTGCAGGATTCCCCTTGGAAGGGAAGCTACCATCCTCCCCGCTGGGACAAGCCTTGA

Coding sequence (CDS)

ATGGCTTCTGCAAGAGCTAATTTCGTTGCCTGGAAGGTGGTCTTCTTTGCTTTGCTTCTCCTTGCTTTCGTTGTTTCTGCGAGGGAACTTGCTGGGACCAACGTGGTGGCTCGCATAGCCCGTGAGACCGCGAAGGAGACGAATGGTGTGAAGGGCAGGAGATTAAGTATCGACGAGAGTTGGATAAAGTTTGGAAGGGAAACTATTATAGACCTCCTCCTCGTTCTCCCCCTCTTTAACGCAGCCCACAGAGTTGAATTATTTGCTATCATATTCGACTCTTGTCCCCTTGAAAGTGAAGCCCTCTACTACTCTGAGCTTGAGCTTTCTGCAAACAAAATGGCTTCCACAAGAGCTTTCGCTGCCTGGAAGGTTGTCTTCTTTGCTTTGCTTCTTCTTGCTTTCGACGTTTCTGCGAGAGAACTTGTTGGAACCAATGTAGTGGCTCGCACGGCTCGCACAGCTCGTGAGATGGCGGTGGAGATGAATGGTGTAATGGGCATGAGATTAGTTAGTCAAGTGCAGGATTCCCCTTGGAAGGGAAGCTACCATCCTCCCCGCTGGGACAAGCCTTGA

Protein sequence

MASARANFVAWKVVFFALLLLAFVVSARELAGTNVVARIARETAKETNGVKGRRLSIDESWIKFGRETIIDLLLVLPLFNAAHRVELFAIIFDSCPLESEALYYSELELSANKMASTRAFAAWKVVFFALLLLAFDVSARELVGTNVVARTARTAREMAVEMNGVMGMRLVSQVQDSPWKGSYHPPRWDKP

Homology

[Close]

BLAST of Sgr030021 vs. NCBI nr
Match: KAG7030842.1 (MDIS1-interacting receptor like kinase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-06
Identity = 54/146 (36.99%), Postives = 57/146 (39.04%), Query Frame = 0


Query: 1   MASARANFVAWKVVFFALLLLAFVVSARELAGTNVVARIARETAKETNGVKGRRLSIDES 60
           MAS R  F AWK+VFFALLLLAF VSAR L GTNVVAR                      
Sbjct: 1   MASTRPCFAAWKIVFFALLLLAFNVSARNLVGTNVVAR---------------------- 60

Query: 61  WIKFGRETIIDLLLVLPLFNAAHRVELFAIIFDSCPLESEALYYSELELSANKMASTRAF 120
                                                                      F
Sbjct: 61  ---------------------------------------------------------PCF 67

Query: 121 AAWKVVFFALLLLAFDVSARELVGTN 147
           AAWK+VFFALLLLAF+VSAR LVGTN
Sbjct: 121 AAWKIVFFALLLLAFNVSARNLVGTN 67

[Close]

BLAST of Sgr030021 vs. NCBI nr
Match: KAG6600178.1 (hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04
Identity = 42/65 (64.62%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 1  MASARANFVAWK-VVFFALLLLAFVVSARELAGTNVVARIARETAKETNGVKGRRL---S 60
          MAS  A FV WK VVFFALLLLAF VSAREL GTN+VAR   E   ETN   GRRL    
Sbjct: 1  MASPSA-FVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN--VGRRLIARQ 60

Query: 61 IDESW 62
          +D SW
Sbjct: 61 LDTSW 62

[Close]

BLAST of Sgr030021 vs. NCBI nr
Match: KAG7030841.1 (hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04
Identity = 42/65 (64.62%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 1  MASARANFVAWK-VVFFALLLLAFVVSARELAGTNVVARIARETAKETNGVKGRRL---S 60
          MAS  A FV WK VVFFALLLLAF VSAREL GTN+VAR   E   ETN   GRRL    
Sbjct: 1  MASPSA-FVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETN--VGRRLIARQ 60

Query: 61 IDESW 62
          +D SW
Sbjct: 61 LDTSW 62

The following BLAST results are available for this feature:

BLAST of Sgr030021 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030842.1	1.7e-06	36.99	MDIS1-interacting receptor like kinase 2, partial [Cucurbita argyrosperma subsp....	[more]
KAG6600178.1	1.2e-04	64.62	hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030841.1	1.2e-04	64.62	hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sgr030021 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr030021 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr030021 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr030021.1	Sgr030021.1	mRNA