Sgr029949 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr029949
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionTerminase small subunit family protein
Locationtig00153554: 1384306 .. 1384566 (+)
RNA-Seq ExpressionSgr029949
SyntenySgr029949
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCCATCGTCGTCAACCACCTCACAGAGAATGCCGACGGGGTTCAGCCCGGCGAGCTCTGCAAGATCGACGGATGCTTCTGTGTGTCCAGGCCTCTTCAGAACGCCGCCTTCCCTGTATCTGAGTGGGAACATATGGCCGGGCCGCTTGAAATCATATGGTTTTGAGTCTCTTGATGCGAGCGCCAGCACCGTCGCCGCCCTGTCGTCGGCTGAAACTCCGGTGGTTGTGCCGTCTCTTCCATCCTTGAGAAGTTGA

mRNA sequence

ATGGAGCCATCGTCGTCAACCACCTCACAGAGAATGCCGACGGGGTTCAGCCCGGCGAGCTCTGCAAGATCGACGGATGCTTCTGTGTGTCCAGGCCTCTTCAGAACGCCGCCTTCCCTGTATCTGAGTGGGAACATATGGCCGGGCCGCTTGAAATCATATGGTTTTGAGTCTCTTGATGCGAGCGCCAGCACCGTCGCCGCCCTGTCGTCGGCTGAAACTCCGGTGGTTGTGCCGTCTCTTCCATCCTTGAGAAGTTGA

Coding sequence (CDS)

ATGGAGCCATCGTCGTCAACCACCTCACAGAGAATGCCGACGGGGTTCAGCCCGGCGAGCTCTGCAAGATCGACGGATGCTTCTGTGTGTCCAGGCCTCTTCAGAACGCCGCCTTCCCTGTATCTGAGTGGGAACATATGGCCGGGCCGCTTGAAATCATATGGTTTTGAGTCTCTTGATGCGAGCGCCAGCACCGTCGCCGCCCTGTCGTCGGCTGAAACTCCGGTGGTTGTGCCGTCTCTTCCATCCTTGAGAAGTTGA

Protein sequence

MEPSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLDASASTVAALSSAETPVVVPSLPSLRS
Homology
BLAST of Sgr029949 vs. NCBI nr
Match: GER36411.1 (terminase small subunit family protein [Striga asiatica])

HSP 1 Score: 98.6 bits (244), Expect = 2.8e-17
Identity = 54/83 (65.06%), Postives = 62/83 (74.70%), Query Frame = 0

Query: 1   MEPSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLD 60
           ++PSSST S + P G +PAS+ARST ASVCP L RTPPS Y +GN+ PGRLKS GFES D
Sbjct: 207 IDPSSSTISHKTPAGSNPASTARSTAASVCPALLRTPPSRYFNGNMCPGRLKSSGFESFD 266

Query: 61  ASASTVAALSSAETPVVVPSLPS 84
           A A  V ALS AETPV+VP   S
Sbjct: 267 ARAFIVIALSRAETPVLVPCFAS 289

BLAST of Sgr029949 vs. NCBI nr
Match: SVJ71125.1 (Uncharacterised protein [Klebsiella pneumoniae])

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-07
Identity = 42/86 (48.84%), Postives = 49/86 (56.98%), Query Frame = 0

Query: 1   MEPSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLD 60
           M PSS  TSQ  P G +PA  ARS  ASVCP   R PP   +SG +WPG   S       
Sbjct: 21  MLPSSFITSQITPDGSNPAIRARSQAASVCPARARVPPGWAISGKMWPGLTMSAATAFFA 80

Query: 61  ASASTVAALSSAETPVVVPSLPSLRS 87
           A+A TV A S+AE PVV PS  S+ +
Sbjct: 81  AAACTVRARSAAEMPVVTPSAASMET 106

BLAST of Sgr029949 vs. NCBI nr
Match: CDF04406.1 (terminase small subunit family protein [Megasphaera elsdenii CAG:570])

HSP 1 Score: 63.5 bits (153), Expect = 9.9e-07
Identity = 40/76 (52.63%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 3  PSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLDAS 62
          PSS+  SQ  PT  SPA   RST ASV P   RTPP L +SG +WPGR KS G       
Sbjct: 23 PSSAMISQHRPTCLSPARRMRSTVASVWPLRVRTPPRLAMSGKLWPGRRKSSGRADSSTH 82

Query: 63 ASTVAALSSAETPVVV 79
             V A S+AE PVVV
Sbjct: 83 LRAVRARSTAEMPVVV 98

BLAST of Sgr029949 vs. NCBI nr
Match: MBV6476229.1 (hypothetical protein [Rhodocyclaceae bacterium])

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-06
Identity = 42/86 (48.84%), Postives = 46/86 (53.49%), Query Frame = 0

Query: 1  MEPSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLD 60
          M PSS   SQ    G  PAS ARS  ASV P    TPP   +SG +WPG   S G   L 
Sbjct: 1  MVPSSLRISQITAAGSQPASWARSQPASVWPARTSTPPFCAISGKMWPGWTMSAGCARLA 60

Query: 61 ASASTVAALSSAETPVVVPSLPSLRS 87
           +A TV A S AE PVV PS  S+ S
Sbjct: 61 TAACTVRARSCAEMPVVTPSAASMES 86

BLAST of Sgr029949 vs. NCBI nr
Match: VUQ34778.1 (hypothetical protein MJPIPEME_03944 [Stenotrophomonas maltophilia] >VUQ62534.1 hypothetical protein ECFIKIJB_00367 [Stenotrophomonas maltophilia] >VUR40555.1 hypothetical protein GECPPDLG_04022 [Stenotrophomonas maltophilia])

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05
Identity = 39/84 (46.43%), Postives = 44/84 (52.38%), Query Frame = 0

Query: 1   MEPSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLD 60
           M PS    S   P G SPAS ARST ASV P    TPP   +SG +WPG  +S G     
Sbjct: 21  MLPSGFRISTSTPAGSSPASMARSTPASVWPARVSTPPGWAISGKMWPGWCRSDGLALGF 80

Query: 61  ASASTVAALSSAETPVVVPSLPSL 85
            +   V A S AE PVV PS  S+
Sbjct: 81  TAVRMVCARSCAEMPVVTPSAASM 104

BLAST of Sgr029949 vs. ExPASy TrEMBL
Match: A0A7C9AS81 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.9e-21
Identity = 61/83 (73.49%), Postives = 66/83 (79.52%), Query Frame = 0

Query: 1   MEPSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLD 60
           +EPSSST SQ  PTG SPAS ARST+ASV P LF+TPPSLY +GNIWPGRLKS GFES D
Sbjct: 19  IEPSSSTISQITPTGSSPASIARSTEASVWPALFKTPPSLYFNGNIWPGRLKSPGFESFD 78

Query: 61  ASASTVAALSSAETPVVVPSLPS 84
           A A TV ALS A+TPVVVP   S
Sbjct: 79  ARALTVVALSWADTPVVVPFFAS 101

BLAST of Sgr029949 vs. ExPASy TrEMBL
Match: A0A0A9VI93 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17
Identity = 60/84 (71.43%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 1  MEPSSSTT-SQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESL 60
          MEPSSS+T SQR  TG +PA+ ARSTDASVCP LFRTPPSLY  G I PGRLKS G E  
Sbjct: 1  MEPSSSSTISQRTATGGNPANMARSTDASVCPALFRTPPSLYFRGKICPGRLKSSGLELG 60

Query: 61 DASASTVAALSSAETPVVVPSLPS 84
          DASA  V A S AETPVVVPS  S
Sbjct: 61 DASARIVFARSLAETPVVVPSFAS 84

BLAST of Sgr029949 vs. ExPASy TrEMBL
Match: A0A5A7PUQ9 (Terminase small subunit family protein OS=Striga asiatica OX=4170 GN=STAS_12746 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 54/83 (65.06%), Postives = 62/83 (74.70%), Query Frame = 0

Query: 1   MEPSSSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESLD 60
           ++PSSST S + P G +PAS+ARST ASVCP L RTPPS Y +GN+ PGRLKS GFES D
Sbjct: 207 IDPSSSTISHKTPAGSNPASTARSTAASVCPALLRTPPSRYFNGNMCPGRLKSSGFESFD 266

Query: 61  ASASTVAALSSAETPVVVPSLPS 84
           A A  V ALS AETPV+VP   S
Sbjct: 267 ARAFIVIALSRAETPVLVPCFAS 289

BLAST of Sgr029949 vs. ExPASy TrEMBL
Match: A0A0A9RNB8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.8e-17
Identity = 61/84 (72.62%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 1  MEPSSSTT-SQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESL 60
          MEPSSS+T SQR  TG +PAS ARSTDASVCP L  TPPSLYL G I PGRLKS G E  
Sbjct: 1  MEPSSSSTISQRTATGGNPASIARSTDASVCPALLSTPPSLYLRGKICPGRLKSSGLELG 60

Query: 61 DASASTVAALSSAETPVVVPSLPS 84
          DASA  V A S AETPVVVPSL S
Sbjct: 61 DASARIVFARSLAETPVVVPSLAS 84

BLAST of Sgr029949 vs. ExPASy TrEMBL
Match: A0A0A9G1I1 (Riboflavin biosynthesis protein ribAB OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.5e-12
Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 0

Query: 1   MEPS-SSTTSQRMPTGFSPASSARSTDASVCPGLFRTPPSLYLSGNIWPGRLKSYGFESL 60
           +EPS  S T +R  TG  PA+  RSTDASVCP LF TPP  YL GN+ PG L+S G ES 
Sbjct: 25  IEPSLGSITVERTDTGRKPANVTRSTDASVCPALFNTPPFRYLRGNMCPGLLRSLGLESG 84

Query: 61  DASASTVAALSSAETPVVVPSLPS 84
           +A    V ALS+AETPV +P+L S
Sbjct: 85  EARVRIVFALSAAETPVDMPTLAS 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GER36411.12.8e-1765.06terminase small subunit family protein [Striga asiatica][more]
SVJ71125.11.2e-0748.84Uncharacterised protein [Klebsiella pneumoniae][more]
CDF04406.19.9e-0752.63terminase small subunit family protein [Megasphaera elsdenii CAG:570][more]
MBV6476229.14.9e-0648.84hypothetical protein [Rhodocyclaceae bacterium][more]
VUQ34778.12.4e-0546.43hypothetical protein MJPIPEME_03944 [Stenotrophomonas maltophilia] >VUQ62534.1 h... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A7C9AS815.9e-2173.49Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A0A9VI931.0e-1771.43Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A5A7PUQ91.4e-1765.06Terminase small subunit family protein OS=Striga asiatica OX=4170 GN=STAS_12746 ... [more]
A0A0A9RNB81.8e-1772.62Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9G1I18.5e-1257.14Riboflavin biosynthesis protein ribAB OS=Arundo donax OX=35708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr029949.1Sgr029949.1mRNA