Sgr029598 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr029598
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Pentatricopeptide repeat-containing protein
Location	tig00153403: 2380845 .. 2385768 (-)
RNA-Seq Expression	Sgr029598
Synteny	Sgr029598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCTCGCCTTCGCGACGCCTCAATCTTCCACTCGTCGTCGATTTCCCCAACCTGCACAGTCGGTTCAATGGCTTCCGTCAGCCCCACGCGTTCGGTTATCTCTTCTTCCCACTCACGGTCACTTAAGCGGAGTCCCGGCCAGTCCTCCGGCGGCCTACAGAGAGATCCGAAGAAGGGTCTGTCTCGAATTCTGAGGAAAGACGCTGCTATTAGAGCCATAGAGAGGAAAGCGAACTCGAAGAAGTACAATAATCTGTGGCCCAAAGCTGTTTTGGAGGCTTTGGATGAGGCTATTGAGGAGAATCTCTGGGAGACTGCTCTTAAGGTTGGTTGATCTATTGATTTTTTCTAAGGTTTTTGTTTTCTCTTCGTTTTCAATATTTTCTTCGCCGTAGAAGGGAAGGAGGAGAAAATTTTGGAACATTACGTGGTTGGAAATGAATGGCGCTGATTGCGATGTGATTAAGAATAGTCTATCTGTCTTGTTTTAATTTCGGTGTATATGGAAATTTTCCAGCCTACTACCTGAATTTACAAGTGAAGAGATTCGAACATCAATGCCCAATAAATTCTATATTAATTTCAGCTAAAATGAACAATTGTCACTTATCATTGAGGAGTGAGCACACCTCCAACTCCAACTCCATATCAAAAAGGTTTCTTCTATGGTGAAAATTTCAAGTGTGCTCAGTACCCTTCCAGCAGCCTTTAGCACTGGAAGTTATGTAAATATTAGGAAATAAAAGACTTAATGGAGAAGTTCGATTGAAGCATCCTCCCAAAATCTGATTTTCCCATTTCTCAACTTCAAGGCTATACCTGTCTCCAGAAAAGGCCTAGTTTTAACGATTTTAACCCATGTCCCAAAGCTTCTTCTACCTGACATTTCTCATGAACCAATGAAGGCTATCAATCCCTTATCTACTTGAGACTACATGTCTGTACAGGGGGTTTTCCTCAAGAAAGAACCTCTACAACTGTTTTGAGAAGAGAGTGGTATTTCTGTTTATTATATTTCCCACTCCCAGACTGCACAAAGAGTGGGGTAGGGCAGCGCACTTCCAATTAACAAGGTGGGTGCCTCCATCAAGTTGGCTCCCTCCCATATAAAGTCTCTCAAAAAAATTACCAATCTCTTTTCTTGCTTAATTGGGATTTTGAAGATAGAAAAAAAGTAAGAAAGAACATTAAAGGATGGACTGCACATGAGTCAATCTACCTCCTTTTGAGATAGGAAAGCTCCTCCATATAGCAAGTCTAGCATGCGTCCTTTATAACTGGTTCCCAATAGATGGTAGACTCAGCATTCCCTCCCAAAGACAGCCCCAAATACTAAAAGGCAAAGATACAAGAACAAACTTGCAGCCAAAAAAAATTAGACAATGCCGACTAGGGAGTACTTTTGCAAATTAATAGTTAGCCCTAGAAGCTGTTGGAAAATAGTGAGAGGTTTCCACCAATTTTGGAGTTTAGCATCATCCCTAGAATTGAAAATAATGGTATCATCAACATACTGGATGTGGGTAATATGCACTGTCTGGTCATCGATTTTGAAGGCTTCTATTCTACCGTCATTCGTGCATTATCAATCAAGTGACTAAGTCTGCGGCTAGGTAAAGGGGGAAGGAGAGAGAGAGAGAGGAAGTCTCCTTGCCTAAAAACCCTAGAAGCCAAAACTTTGCCCCTTGGACATCTGTTAATAAGGATTTAGAAACTTGTGGAAGAAAGACAATCTAGAATCCAATTTCTCCTTTTTTACCACAAATTTTTTCTCTATAACAGCAGCCAAGTAAAACAAGTCAGCCTTATGTTAAGCCTCAAAGTTAGCTATGACAAAAGTAGTGTTACGGTCCAAATATTCCTCACAATTTGGATATGGTTGATGAGGTAGCTAGCAGATTCTATTGTTCTCATTTTCATTGGCTATGAATCATCTTGGTTTCCCTTTGGAGGTAGCCTAGCGCTTACTAGATTTTTGGAATTTGTTGGTCGACAAAGTTGGAGCTAAGTTATATAACTGGAGGAATACTTCCCTCTCTAAAGGAGGGAGACTCACACTTAATAAGCTACATTAGGAAGTATGCCTCTCTACTTCTCTCTTTTTAAGTTCCCAAGAAGATTGCTTTGGGTTTGAAGAGGATTTTCTGAGATTTTCTTTGGGATGATAAAAATCCAAATAAAGGTTTGAGAAATTCCTTTCCGACTGTACAATTTCTTTCCTTCCTTTTTTGTAGACAATTGAAAAAAAAAATCTTCTTATACTGCATATCCGTACTGAAAATGAAGAAACCTACAACTAATGAACTGATTTTACCCTCGTATTTTGACAATAAGAGTTATGACCAAATAATTTGAATATCTCTTCAGATTTTTGGATTACTTCGCCAGCAACAATGGTATGAACCAAGATGCCAAACATACACAAAATTGTTGATGCTGCTGGGTAAGTGCAGGCAACCTGAGCAAGCAAGCTTGCTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCCTCTATAGATGTTTACACTGCTCTTGTTAGTGCTTATGGTCGTAGTGGCCTCCTTCTCAGGCCCTTTCAACAGTAGATGAAATGAAATCAGTTTCTGACTGCAAGCCAGATGTACATACATATTCAATTCTCATTGATTGTTGCACAAAACTCCATCGTTTTGATCTTCTGAAGGACATACTTGCTGATATGTCATATCTGGGGATTGCATGTAATACAGTACTTACAATACTATTATTAATGGATTTGGAAAGGCTAAAATGTTTGAGCAAATGGAAAGCTTGTTATTGGACATGATTGAAAGTGGTAGCTGCCTTCCAGATTTGATTACATTCAATTCTTTTATCAGAGCCTACGGAAATAATGAGCAGATTGAGAAGATGGAGAAGTGGTATAATGAATTTCAGCTGATGGGAATCAAGCCAGACGTTTGGACATACAATACTATGATCAGCTCATATGGGAAAGCTGGAATGTATGACAGATGGTGTCTGTTTTGAATTTCATGGAAAAACGCTTTTTCACTCCAACAATTGTTACTATGAATACAGTCATTGATGTGTTTGGAAGAGCTGGAAATATTGAGAAGATGGAAGAATACTTCAAAAGATGAAACATAAGGAATGAAGCCCAACTCTGTGACTTACTGTTCCCTCGTTAAGGCTTATGGTAAATCTGGTAATATTGAGAAAGTTGATTCGGTTTTGAGGCAAATTGAAAATTCTGATGTGGTACCAGATACCCCCCTTTTTAACTGCCTTATCAATGTGTATGGCCAGGCTGGTGATGTGAAAAAGATGGGAGAGTTGTTCTTGGAAATGAAAGAGAATAGATGTGTGCCTGACAGCATTACATTGCTACAATGATTCAGGCCTTAAATGCTCAAGGCATGACAGAGGCTGCTCAAAGATTGGAGAATAAGTTGTTTGCCACCAGGATGACAAGGTAAATTAGTGCTTATTTATGATTTTACATAACGGTTGATTATAGTAATGATTTCACTCATTTTGCTATCCTAGATACTTCTGTGGAAATATCTTATTATGCCGACATAAGATCTCTTCTTTCTAGTGCCTTTTCCTCCCAGCTGATTTTTGTTGTTCTCATGTACCAAACCCTAACGACCTTGTTACATCCTATTGGTTTGATGCAGTGCGGTGGGCACTGAGAGAAAACCTGGTTTGACAAGAAAACAGTGTCTAACACTTCCCTAGTGTGGAAGACCCACAATGCTGCCACTGAGGGCATGGGCATGTTTTGAGAGCAGGCCATACTTCTCAATTCTTCAGGTGGACTTTCTTCATTCATCTGAATTGTCACATTATAAATTTAAACCTAAGAATCCCATCTTGTTTTTTTTGTTATTGCTTGCTTGTTTTATTAAAAATATCCTGTTGGATAACACTTTCTATAACTCCAAAGTTTTGTGCTTATTCAGGCTCAAAGATCGCAAATCTCGCAAAAGTTGGGTTTTGTGATGGGACAATGAATATCTATCACTGCAAGGAAAGATTCTTGATGGTCTTGCGTCTGAATGATCCATATGTTAACATGTAAGCGCACCTTTTTCTGTTCTCTATCTTATTGATTGCAAAGAATTTCTCAAAATAGAGTGTAATTAACACAATTCCAGCAGTCACCAATCATTTCAATTGTTTACATGAAAATGCAGAATGCTATTGGTTTAAGGATAGGCTTAGTTACATAATCTTATTGATACCAACTCTACTGATAACCATATCAAAACTCAACAATTTTTTGTTCTGTTTGCATTCATGACCTTTTATGTTTCCACTTACAATTACATTGCTCTGATATTATTGTATTTGACAGGAAAACTGTGTTCTTGAAGAGTGCGCGCCCCCCAACACCCCCCCAAAAGCTTAGTGGGACTACTATTCCTTCTCAAGGCAATCAACCGTTAGCAACAAAACATTCATCTCTGGTCTTTTCAGACCAATCTGGATATAACAAATGTTTTGGTGCTAGAGTAGCTCTAGCTCTCTAGCATCTGGCTTGCAATGGCTGAAATTGGACTACAGCTCAACTCAAGGTACTCTTCAGACTGTTACCGTGGCCCGTCACCCCCATTGCATAATCTTCTGGTATCTTTCACTGTGACTGTTATACTGTACCCGGTCGCCCGTTGCATAATCTTCTGGTAACTTCCACTGTGATCCAAGTTGTGCTCCTCTAAAACTTGTCCATAGACATCCTTGCAACTGCACCCATTGCATAATCTTCTGGTATCTTTCACTGTGACTGTTATACTGTACCCGGTCGCCCATTGCATAATCTTCTGGTAACTTCCACTGTGATCCAAGTTGTGCTCCTCTAAAACTTGTCCATAGACATCCTTGCAACTGCATTCCTACTTTACAGCTGCCTATGGAAGATGGAGGGGTCTAG

mRNA sequence

ATGGAGCCTCGCCTTCGCGACGCCTCAATCTTCCACTCGTCGTCGATTTCCCCAACCTGCACAGTCGGTTCAATGGCTTCCGTCAGCCCCACGCGTTCGGTTATCTCTTCTTCCCACTCACGGTCACTTAAGCGGAGTCCCGGCCAGTCCTCCGGCGGCCTACAGAGAGATCCGAAGAAGGGTCTGTCTCGAATTCTGAGGAAAGACGCTGCTATTAGAGCCATAGAGAGGAAAGCGAACTCGAAGAAGTACAATAATCTGTGGCCCAAAGCTGTTTTGGAGGCTTTGGATGAGGCTATTGAGGAGAATCTCTGGGAGACTGCTCTTAAGATTTTTGGATTACTTCGCCAGCAACAATGGTATGAACCAAGATGCCAAACATACACAAAATTGTTGATGCTGCTGGGTAAGTGCAGGCAACCTGAGCAAGCAAGCTTGCTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCCTCTATAGATGTTTACACTGCTCTTGTTAGTGCTTATGTTTCTGACTGCAAGCCAGATGTACATACATATTCAATTCTCATTGATTGTTGCACAAAACTCCATCGTTTTGATCTTCTGAAGGACATACTTGCTGATATGTCATATCTGGGGATTGCATCTGATGGGAATCAAGCCAGACGTTTGGACATACAATACTATGATCAGCTCATATGGGAAAGCTGGAATGCTTATGGTAAATCTGGTAATATTGAGAAAGTTGATTCGGTTTTGAGGCAAATTGAAAATTCTGATGTGGTACCAGATACCCCCCTTTTTAACTGCCTTATCAATGTGTATGGCCAGGCTGGTGATGCCTTAAATGCTCAAGGCATGACAGAGGCTGCTCAAAGATTGGAGAATAAGTTGTTTGCCACCAGGATGACAAGTGCGGTGGGCACTGAGAGAAAACCTGGCTCAAAGATCGCAAATCTCGCAAAAGTTGGGTTTTGTGATGGGACAATGAATATCTATCACTGCAAGGAAAGATTCTTGATGGTCTTGCGTCTGAATGATCCATATGTTAACATGAAAACTGTGTTCTTGAAGAGTGCGCGCCCCCCAACACCCCCCCAAAAGCTTAGTGGGACTACTATTCCTTCTCAAGGCAATCAACCGTTAGCAACAAAACATTCATCTCTGCTCAACTCAAGGTACTCTTCAGACTGTTACCGTGGCCCGTCACCCCCATTGCATAATCTTCTGGTATCTTTCACTGTGACTGTTATACTGTACCCGGTCGCCCGTTGCATAATCTTCTGTTGTGCTCCTCTAAAACTTGTCCATAGACATCCTTGCAACTGCATTCCTACTTTACAGCTGCCTATGGAAGATGGAGGGGTCTAG

Coding sequence (CDS)

ATGGAGCCTCGCCTTCGCGACGCCTCAATCTTCCACTCGTCGTCGATTTCCCCAACCTGCACAGTCGGTTCAATGGCTTCCGTCAGCCCCACGCGTTCGGTTATCTCTTCTTCCCACTCACGGTCACTTAAGCGGAGTCCCGGCCAGTCCTCCGGCGGCCTACAGAGAGATCCGAAGAAGGGTCTGTCTCGAATTCTGAGGAAAGACGCTGCTATTAGAGCCATAGAGAGGAAAGCGAACTCGAAGAAGTACAATAATCTGTGGCCCAAAGCTGTTTTGGAGGCTTTGGATGAGGCTATTGAGGAGAATCTCTGGGAGACTGCTCTTAAGATTTTTGGATTACTTCGCCAGCAACAATGGTATGAACCAAGATGCCAAACATACACAAAATTGTTGATGCTGCTGGGTAAGTGCAGGCAACCTGAGCAAGCAAGCTTGCTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCCTCTATAGATGTTTACACTGCTCTTGTTAGTGCTTATGTTTCTGACTGCAAGCCAGATGTACATACATATTCAATTCTCATTGATTGTTGCACAAAACTCCATCGTTTTGATCTTCTGAAGGACATACTTGCTGATATGTCATATCTGGGGATTGCATCTGATGGGAATCAAGCCAGACGTTTGGACATACAATACTATGATCAGCTCATATGGGAAAGCTGGAATGCTTATGGTAAATCTGGTAATATTGAGAAAGTTGATTCGGTTTTGAGGCAAATTGAAAATTCTGATGTGGTACCAGATACCCCCCTTTTTAACTGCCTTATCAATGTGTATGGCCAGGCTGGTGATGCCTTAAATGCTCAAGGCATGACAGAGGCTGCTCAAAGATTGGAGAATAAGTTGTTTGCCACCAGGATGACAAGTGCGGTGGGCACTGAGAGAAAACCTGGCTCAAAGATCGCAAATCTCGCAAAAGTTGGGTTTTGTGATGGGACAATGAATATCTATCACTGCAAGGAAAGATTCTTGATGGTCTTGCGTCTGAATGATCCATATGTTAACATGAAAACTGTGTTCTTGAAGAGTGCGCGCCCCCCAACACCCCCCCAAAAGCTTAGTGGGACTACTATTCCTTCTCAAGGCAATCAACCGTTAGCAACAAAACATTCATCTCTGCTCAACTCAAGGTACTCTTCAGACTGTTACCGTGGCCCGTCACCCCCATTGCATAATCTTCTGGTATCTTTCACTGTGACTGTTATACTGTACCCGGTCGCCCGTTGCATAATCTTCTGTTGTGCTCCTCTAAAACTTGTCCATAGACATCCTTGCAACTGCATTCCTACTTTACAGCTGCCTATGGAAGATGGAGGGGTCTAG

Protein sequence

MEPRLRDASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDPKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYVSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIASDGNQARRLDIQYYDQLIWESWNAYGKSGNIEKVDSVLRQIENSDVVPDTPLFNCLINVYGQAGDALNAQGMTEAAQRLENKLFATRMTSAVGTERKPGSKIANLAKVGFCDGTMNIYHCKERFLMVLRLNDPYVNMKTVFLKSARPPTPPQKLSGTTIPSQGNQPLATKHSSLLNSRYSSDCYRGPSPPLHNLLVSFTVTVILYPVARCIIFCCAPLKLVHRHPCNCIPTLQLPMEDGGV

Homology

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BLAST of Sgr029598 vs. NCBI nr
Match: XP_022153245.1 (pentatricopeptide repeat-containing protein At3g53170 [Momordica charantia])

HSP 1 Score: 376.3 bits (965), Expect = 3.6e-100
Identity = 243/475 (51.16%), Postives = 265/475 (55.79%), Query Frame = 0


Query: 1   MEP--RLRDASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSS-GGLQRD 60
           MEP   LRDASI  S      C V SMAS+ PTRS ISSS + SLKRS  Q+S  GLQRD
Sbjct: 1   MEPHLHLRDASILRS------CRVDSMASIGPTRSFISSSRAPSLKRSSDQASDNGLQRD 60

Query: 61  PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQ 120
           PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAI++NLWET+LKIFGLLRQ
Sbjct: 61  PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQDNLWETSLKIFGLLRQ 120

Query: 121 QQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY------- 180
           Q+WYEPRC+TYTKLLM+LGKCRQPEQASLLFQI+LSEGLKPSIDVYTALVSAY       
Sbjct: 121 QRWYEPRCETYTKLLMMLGKCRQPEQASLLFQILLSEGLKPSIDVYTALVSAYGRSGLLH 180

Query: 181 -----------VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA--------- 240
                      VSD KP++HTYSILIDCCTKL RFDLLK IL DMSYLGIA         
Sbjct: 181 KAISIVDEMKSVSDYKPNIHTYSILIDCCTKLRRFDLLKGILTDMSYLGIACNTVTYNTI 240

Query: 241 ----------------------------------------SDGNQARRLDIQY------- 298
                                                    +  Q  +++  Y       
Sbjct: 241 INGFGKAKMFEQMESLLLEMIESGSCHPDLITFNSLIKAYGNSEQIEKMEKWYNEFQLMG 300

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BLAST of Sgr029598 vs. NCBI nr
Match: XP_008461323.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461324.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461325.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461327.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461328.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 4.7e-100
Identity = 238/466 (51.07%), Postives = 260/466 (55.79%), Query Frame = 0


Query: 7   DASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDPKKGLSRIL 66
           DA+IF   S S T TV SM S+S T   ISSSHSRSLKRS  QSS  LQRDPKKGLSRIL
Sbjct: 9   DATIFRCFSTSFTSTVISMTSMSSTPYFISSSHSRSLKRSSTQSSDALQRDPKKGLSRIL 68

Query: 67  RKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQ 126
           RKDAAI+AIE+KANSKKYNNLWPKAVLEALDEAI+ENLWETALKIFGLLRQQQWYEPRCQ
Sbjct: 69  RKDAAIKAIEKKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQ 128

Query: 127 TYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY---------------- 186
           TYTKLLMLLGKCRQPEQASLLF+IM SEGLKPSIDVYTALVSAY                
Sbjct: 129 TYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEM 188

Query: 187 --VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA------------------ 246
             VSDCKPDVHTYSILIDCCT+L RFDLLK++LADMSYLGI                   
Sbjct: 189 KSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGITCNTVTYNTIINGFGKAKM 248

Query: 247 -------------------------------SDGNQARRLDIQYYDQL--------IW-- 297
                                           +  Q  +++ ++YD+         +W  
Sbjct: 249 FEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME-KWYDEFQLMGIEPDVWTY 308

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BLAST of Sgr029598 vs. NCBI nr
Match: XP_008461329.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 4.7e-100
Identity = 238/466 (51.07%), Postives = 260/466 (55.79%), Query Frame = 0


Query: 7   DASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDPKKGLSRIL 66
           DA+IF   S S T TV SM S+S T   ISSSHSRSLKRS  QSS  LQRDPKKGLSRIL
Sbjct: 9   DATIFRCFSTSFTSTVISMTSMSSTPYFISSSHSRSLKRSSTQSSDALQRDPKKGLSRIL 68

Query: 67  RKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQ 126
           RKDAAI+AIE+KANSKKYNNLWPKAVLEALDEAI+ENLWETALKIFGLLRQQQWYEPRCQ
Sbjct: 69  RKDAAIKAIEKKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQ 128

Query: 127 TYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY---------------- 186
           TYTKLLMLLGKCRQPEQASLLF+IM SEGLKPSIDVYTALVSAY                
Sbjct: 129 TYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEM 188

Query: 187 --VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA------------------ 246
             VSDCKPDVHTYSILIDCCT+L RFDLLK++LADMSYLGI                   
Sbjct: 189 KSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGITCNTVTYNTIINGFGKAKM 248

Query: 247 -------------------------------SDGNQARRLDIQYYDQL--------IW-- 297
                                           +  Q  +++ ++YD+         +W  
Sbjct: 249 FEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME-KWYDEFQLMGIEPDVWTY 308

[Close]

BLAST of Sgr029598 vs. NCBI nr
Match: XP_038898944.1 (pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Benincasa hispida])

HSP 1 Score: 375.6 bits (963), Expect = 6.2e-100
Identity = 246/475 (51.79%), Postives = 262/475 (55.16%), Query Frame = 0


Query: 1   MEPRL--RDASIFHSSSISPTCTVGSMASV-SPTRSVISSSHSRSLKRSPGQSSGGLQRD 60
           MEP L  ++A IF  S  S T TV SMAS+ S T S ISSSHSRSLKRS GQSS  LQRD
Sbjct: 1   MEPYLHSQNAPIFPCSPTSLTSTVISMASIRSSTPSFISSSHSRSLKRSSGQSSDALQRD 60

Query: 61  PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQ 120
           PKKGLSRILRKDAAI+AIERKANSKKYNNLWPKAVLEALDEAI+ENLWETALKIFGLLRQ
Sbjct: 61  PKKGLSRILRKDAAIKAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQ 120

Query: 121 QQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY------- 180
           QQWYEPRCQTYTKLLMLL KCRQPEQASLLFQIM SEGLKPSIDVYTALVSAY       
Sbjct: 121 QQWYEPRCQTYTKLLMLLSKCRQPEQASLLFQIMFSEGLKPSIDVYTALVSAYGQSGLLH 180

Query: 181 -----------VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA--------- 240
                      VSDCKPDV TYSILIDCCT+  RFDLLK+I ADMSYLGI          
Sbjct: 181 KAISTVVEMKSVSDCKPDVRTYSILIDCCTRHRRFDLLKEIFADMSYLGITCNTVTYNTI 240

Query: 241 ----------------------------------------SDGNQARRLDIQY------- 298
                                                    +  Q  +++  Y       
Sbjct: 241 INGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYNEFQLMG 300

[Close]

BLAST of Sgr029598 vs. NCBI nr
Match: XP_022960242.1 (pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_022960243.1 pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_022960244.1 pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata])

HSP 1 Score: 369.0 bits (946), Expect = 5.8e-98
Identity = 236/474 (49.79%), Postives = 256/474 (54.01%), Query Frame = 0


Query: 1   MEP--RLRDASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDP 60
           MEP   L +A IF   S  PT TV SMAS++PT   ISSS SR L R+  QSS GLQRDP
Sbjct: 1   MEPHLHLHNAPIFGWLSFPPTSTVASMASINPTPFFISSSRSRKLNRTSDQSSDGLQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAIRAIERKANSKKYNNLWP+AVLEALDEAI+ENLWET LKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY-------- 180
            WYEPRC+TYTKLLM+LGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY        
Sbjct: 121 HWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHE 180

Query: 181 ----------VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA---------- 240
                     +SDCKPDVHTYSILIDCCT+  R DLLKDILADMSYLGI           
Sbjct: 181 AIETVDEMKSISDCKPDVHTYSILIDCCTRFRRLDLLKDILADMSYLGITCNTVTYNTII 240

Query: 241 ---------------------------------------SDGNQARRLDIQY-------- 298
                                                   +  Q  +++  Y        
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300

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BLAST of Sgr029598 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.3e-65
Identity = 136/252 (53.97%), Postives = 172/252 (68.25%), Query Frame = 0


Query: 39  HSRSLKRSPGQSSGGLQRDPKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDE 98
           + R+ K + G  S   Q DPKK LSRILR DAA++ IERKANS+KY  LWPKAVLEALDE
Sbjct: 8   NERTEKMNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDE 67

Query: 99  AIEENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKP 158
           AI+EN W++ALKIF LLR+Q WYEPRC+TYTKL  +LG C+QP+QASLLF++MLSEGLKP
Sbjct: 68  AIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKP 127

Query: 159 SIDVYTALVSAY------------------VSDCKPDVHTYSILIDCCTKLHRFDLLKDI 218
           +IDVYT+L+S Y                  VSDCKPDV T+++LI CC KL RFDL+K I
Sbjct: 128 TIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI 187

Query: 219 LADMSYLGIASDGNQARRLDIQYYDQLIWESWNAYGKSGNIEKVDSVLR-QIENSDVVPD 272
           + +MSYLG+              Y+ +I    + YGK+G  E+++SVL   IE+ D +PD
Sbjct: 188 VLEMSYLGVG--------CSTVTYNTII----DGYGKAGMFEEMESVLADMIEDGDSLPD 247

[Close]

BLAST of Sgr029598 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 5.0e-36
Identity = 96/272 (35.29%), Postives = 148/272 (54.41%), Query Frame = 0


Query: 59  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQ 118
           +K +S ILR++A    IE+K  SKK   L P+ VLE+L E I    WE+A+++F LLR+Q
Sbjct: 87  RKAISIILRREATKSIIEKKKGSKK---LLPRTVLESLHERITALRWESAIQVFELLREQ 146

Query: 119 QWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY-------- 178
            WY+P    Y KL+++LGKC+QPE+A  LFQ M++EG   + +VYTALVSAY        
Sbjct: 147 LWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDA 206

Query: 179 ----------VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIAS--------- 238
                       +C+PDVHTYSILI    ++  FD ++D+L+DM   GI           
Sbjct: 207 AFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI 266

Query: 239 DGNQARRLDIQYYDQLIW---------ESW------NAYGKSGNIEKVDSVLRQIENSDV 289
           D     ++ ++    LI          +SW       A+G +G IE +++   + ++S +
Sbjct: 267 DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI 326

[Close]

BLAST of Sgr029598 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.0e-26
Identity = 77/261 (29.50%), Postives = 127/261 (48.66%), Query Frame = 0


Query: 72  IRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKL 131
           I+ +++K + +   N W   V E L + I +  W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 71  IKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKL 130

Query: 132 LMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYV------------------SD 191
           L+LLGK  QP +A  LF  ML EGL+P++++YTAL++AY                     
Sbjct: 131 LVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQ 190

Query: 192 CKPDVHTYSILIDCCTKLHRFDLLKDILADM-----------SYLGIASDGNQAR--RLD 251
           C+PDV TYS L+  C    +FDL+  +  +M             + ++  G   R  +++
Sbjct: 191 CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250

Query: 252 IQYYDQLIW-----ESW------NAYGKSGNIEKVDSVLRQIENSDVVPDTPLFNCLINV 291
               D L+      + W      + +G  G I+ ++S   +  N  + P+T  FN LI  
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310

[Close]

BLAST of Sgr029598 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.7e-15
Identity = 51/198 (25.76%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 97  DEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGL 156
           +E  + + W   L++F  +++Q+WY P    Y+KL+ ++GK  Q   A  LF  M + G 
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164

Query: 157 KPSIDVYTALVSAY----------------------VSDCKPDVHTYSILIDCCTKLHRF 216
           +P   VY AL++A+                      +  C+P+V TY+IL+    +  + 
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224

Query: 217 DLLKDILADMSYLGIASDGNQARRLDIQYYDQLIWESWNAYGKSGNIEKVDSVLRQIENS 273
           D +  +  D+    ++         D+  ++ ++    +AYGK+G I+++++VL ++ ++
Sbjct: 225 DQVNALFKDLDMSPVSP--------DVYTFNGVM----DAYGKNGMIKEMEAVLTRMRSN 284

[Close]

BLAST of Sgr029598 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 8.6e-12
Identity = 49/198 (24.75%), Postives = 93/198 (46.97%), Query Frame = 0


Query: 97  DEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGL 156
           +E    + W   L +F  +++Q+WY      Y+KL+ ++G+  Q   A  LF  M + G 
Sbjct: 96  EELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGC 155

Query: 157 KPSIDVYTALVSAY----------------------VSDCKPDVHTYSILIDCCTKLHRF 216
           KP   VY +L+ A+                      +  C+P + TY+IL+    +    
Sbjct: 156 KPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDT 215

Query: 217 DLLKDILADMSYLGIASDGNQARRLDIQYYDQLIWESWNAYGKSGNIEKVDSVLRQIENS 273
             +  +  D+    ++         D+  Y+ ++    +AYGK+G I++++SVL +++++
Sbjct: 216 KQVDMLFKDLDESVVSP--------DVYTYNGVL----DAYGKNGMIKEMESVLVRMKST 275

[Close]

BLAST of Sgr029598 vs. ExPASy TrEMBL
Match: A0A6J1DG98 (pentatricopeptide repeat-containing protein At3g53170 OS=Momordica charantia OX=3673 GN=LOC111020779 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100
Identity = 243/475 (51.16%), Postives = 265/475 (55.79%), Query Frame = 0


Query: 1   MEP--RLRDASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSS-GGLQRD 60
           MEP   LRDASI  S      C V SMAS+ PTRS ISSS + SLKRS  Q+S  GLQRD
Sbjct: 1   MEPHLHLRDASILRS------CRVDSMASIGPTRSFISSSRAPSLKRSSDQASDNGLQRD 60

Query: 61  PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQ 120
           PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAI++NLWET+LKIFGLLRQ
Sbjct: 61  PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQDNLWETSLKIFGLLRQ 120

Query: 121 QQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY------- 180
           Q+WYEPRC+TYTKLLM+LGKCRQPEQASLLFQI+LSEGLKPSIDVYTALVSAY       
Sbjct: 121 QRWYEPRCETYTKLLMMLGKCRQPEQASLLFQILLSEGLKPSIDVYTALVSAYGRSGLLH 180

Query: 181 -----------VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA--------- 240
                      VSD KP++HTYSILIDCCTKL RFDLLK IL DMSYLGIA         
Sbjct: 181 KAISIVDEMKSVSDYKPNIHTYSILIDCCTKLRRFDLLKGILTDMSYLGIACNTVTYNTI 240

Query: 241 ----------------------------------------SDGNQARRLDIQY------- 298
                                                    +  Q  +++  Y       
Sbjct: 241 INGFGKAKMFEQMESLLLEMIESGSCHPDLITFNSLIKAYGNSEQIEKMEKWYNEFQLMG 300

[Close]

BLAST of Sgr029598 vs. ExPASy TrEMBL
Match: A0A1S3CEG4 (pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100
Identity = 238/466 (51.07%), Postives = 260/466 (55.79%), Query Frame = 0


Query: 7   DASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDPKKGLSRIL 66
           DA+IF   S S T TV SM S+S T   ISSSHSRSLKRS  QSS  LQRDPKKGLSRIL
Sbjct: 9   DATIFRCFSTSFTSTVISMTSMSSTPYFISSSHSRSLKRSSTQSSDALQRDPKKGLSRIL 68

Query: 67  RKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQ 126
           RKDAAI+AIE+KANSKKYNNLWPKAVLEALDEAI+ENLWETALKIFGLLRQQQWYEPRCQ
Sbjct: 69  RKDAAIKAIEKKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQ 128

Query: 127 TYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY---------------- 186
           TYTKLLMLLGKCRQPEQASLLF+IM SEGLKPSIDVYTALVSAY                
Sbjct: 129 TYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEM 188

Query: 187 --VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA------------------ 246
             VSDCKPDVHTYSILIDCCT+L RFDLLK++LADMSYLGI                   
Sbjct: 189 KSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGITCNTVTYNTIINGFGKAKM 248

Query: 247 -------------------------------SDGNQARRLDIQYYDQL--------IW-- 297
                                           +  Q  +++ ++YD+         +W  
Sbjct: 249 FEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME-KWYDEFQLMGIEPDVWTY 308

[Close]

BLAST of Sgr029598 vs. ExPASy TrEMBL
Match: A0A1S3CFP9 (pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100
Identity = 238/466 (51.07%), Postives = 260/466 (55.79%), Query Frame = 0


Query: 7   DASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDPKKGLSRIL 66
           DA+IF   S S T TV SM S+S T   ISSSHSRSLKRS  QSS  LQRDPKKGLSRIL
Sbjct: 9   DATIFRCFSTSFTSTVISMTSMSSTPYFISSSHSRSLKRSSTQSSDALQRDPKKGLSRIL 68

Query: 67  RKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQ 126
           RKDAAI+AIE+KANSKKYNNLWPKAVLEALDEAI+ENLWETALKIFGLLRQQQWYEPRCQ
Sbjct: 69  RKDAAIKAIEKKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQ 128

Query: 127 TYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY---------------- 186
           TYTKLLMLLGKCRQPEQASLLF+IM SEGLKPSIDVYTALVSAY                
Sbjct: 129 TYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEM 188

Query: 187 --VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA------------------ 246
             VSDCKPDVHTYSILIDCCT+L RFDLLK++LADMSYLGI                   
Sbjct: 189 KSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGITCNTVTYNTIINGFGKAKM 248

Query: 247 -------------------------------SDGNQARRLDIQYYDQL--------IW-- 297
                                           +  Q  +++ ++YD+         +W  
Sbjct: 249 FEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME-KWYDEFQLMGIEPDVWTY 308

[Close]

BLAST of Sgr029598 vs. ExPASy TrEMBL
Match: A0A6J1HAD9 (pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3662 GN=LOC111461045 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98
Identity = 236/474 (49.79%), Postives = 256/474 (54.01%), Query Frame = 0


Query: 1   MEP--RLRDASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDP 60
           MEP   L +A IF   S  PT TV SMAS++PT   ISSS SR L R+  QSS GLQRDP
Sbjct: 1   MEPHLHLHNAPIFGWLSFPPTSTVASMASINPTPFFISSSRSRKLNRTSDQSSDGLQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAIRAIERKANSKKYNNLWP+AVLEALDEAI+ENLWET LKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY-------- 180
            WYEPRC+TYTKLLM+LGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY        
Sbjct: 121 HWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHE 180

Query: 181 ----------VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA---------- 240
                     +SDCKPDVHTYSILIDCCT+  R DLLKDILADMSYLGI           
Sbjct: 181 AIETVDEMKSISDCKPDVHTYSILIDCCTRFRRLDLLKDILADMSYLGITCNTVTYNTII 240

Query: 241 ---------------------------------------SDGNQARRLDIQY-------- 298
                                                   +  Q  +++  Y        
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300

[Close]

BLAST of Sgr029598 vs. ExPASy TrEMBL
Match: A0A0A0K9Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.1e-97
Identity = 236/465 (50.75%), Postives = 258/465 (55.48%), Query Frame = 0


Query: 7   DASIFHSSSISPTCTVGSMASVSPTRSVISSSHSRSLKRSPGQSSGGLQRDPKKGLSRIL 66
           DA++F   S S T  V SMASVS T   ISSSHSRSLKR+  QSS  LQRDPKKGLSRIL
Sbjct: 9   DATVFRCFSTSFTSKVISMASVSSTPYFISSSHSRSLKRTSTQSSDALQRDPKKGLSRIL 68

Query: 67  RKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQ 126
           R+DAAI+AIERKANSKKYNNLWPKAVLEALDEAI+ENLWETALKIFGLLRQQQWYEPRCQ
Sbjct: 69  RRDAAIKAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQ 128

Query: 127 TYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY---------------- 186
           TYTKLLMLLGKC+QPEQASLLF+IM SEGLKPSIDVYTALVSAY                
Sbjct: 129 TYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEM 188

Query: 187 --VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIA------------------ 246
             +SDCKPDVHTYSILIDCCT+L RFDLLK ILADMS LGI                   
Sbjct: 189 KSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFGKAKM 248

Query: 247 -------------------------------SDGNQARRLDIQY---------------- 297
                                           +  Q  +++  Y                
Sbjct: 249 FEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYN 308

[Close]

BLAST of Sgr029598 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 3.3e-67
Identity = 139/264 (52.65%), Postives = 177/264 (67.05%), Query Frame = 0


Query: 27  SVSPTRSVISSSHSRSLKRSPGQSSGGLQRDPKKGLSRILRKDAAIRAIERKANSKKYNN 86
           S++PT       + R+ K + G  S   Q DPKK LSRILR DAA++ IERKANS+KY  
Sbjct: 46  SITPTMCSTKVPNERTEKMNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLT 105

Query: 87  LWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASL 146
           LWPKAVLEALDEAI+EN W++ALKIF LLR+Q WYEPRC+TYTKL  +LG C+QP+QASL
Sbjct: 106 LWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASL 165

Query: 147 LFQIMLSEGLKPSIDVYTALVSAY------------------VSDCKPDVHTYSILIDCC 206
           LF++MLSEGLKP+IDVYT+L+S Y                  VSDCKPDV T+++LI CC
Sbjct: 166 LFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCC 225

Query: 207 TKLHRFDLLKDILADMSYLGIASDGNQARRLDIQYYDQLIWESWNAYGKSGNIEKVDSVL 266
            KL RFDL+K I+ +MSYLG+              Y+ +I    + YGK+G  E+++SVL
Sbjct: 226 CKLGRFDLVKSIVLEMSYLGVG--------CSTVTYNTII----DGYGKAGMFEEMESVL 285

Query: 267 R-QIENSDVVPDTPLFNCLINVYG 272
              IE+ D +PD    N +I  YG
Sbjct: 286 ADMIEDGDSLPDVCTLNSIIGSYG 297

[Close]

BLAST of Sgr029598 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 3.6e-37
Identity = 96/272 (35.29%), Postives = 148/272 (54.41%), Query Frame = 0


Query: 59  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQ 118
           +K +S ILR++A    IE+K  SKK   L P+ VLE+L E I    WE+A+++F LLR+Q
Sbjct: 87  RKAISIILRREATKSIIEKKKGSKK---LLPRTVLESLHERITALRWESAIQVFELLREQ 146

Query: 119 QWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAY-------- 178
            WY+P    Y KL+++LGKC+QPE+A  LFQ M++EG   + +VYTALVSAY        
Sbjct: 147 LWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDA 206

Query: 179 ----------VSDCKPDVHTYSILIDCCTKLHRFDLLKDILADMSYLGIAS--------- 238
                       +C+PDVHTYSILI    ++  FD ++D+L+DM   GI           
Sbjct: 207 AFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI 266

Query: 239 DGNQARRLDIQYYDQLIW---------ESW------NAYGKSGNIEKVDSVLRQIENSDV 289
           D     ++ ++    LI          +SW       A+G +G IE +++   + ++S +
Sbjct: 267 DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI 326

[Close]

BLAST of Sgr029598 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-27
Identity = 77/261 (29.50%), Postives = 127/261 (48.66%), Query Frame = 0


Query: 72  IRAIERKANSKKYNNLWPKAVLEALDEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKL 131
           I+ +++K + +   N W   V E L + I +  W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 71  IKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKL 130

Query: 132 LMLLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYV------------------SD 191
           L+LLGK  QP +A  LF  ML EGL+P++++YTAL++AY                     
Sbjct: 131 LVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQ 190

Query: 192 CKPDVHTYSILIDCCTKLHRFDLLKDILADM-----------SYLGIASDGNQAR--RLD 251
           C+PDV TYS L+  C    +FDL+  +  +M             + ++  G   R  +++
Sbjct: 191 CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250

Query: 252 IQYYDQLIW-----ESW------NAYGKSGNIEKVDSVLRQIENSDVVPDTPLFNCLINV 291
               D L+      + W      + +G  G I+ ++S   +  N  + P+T  FN LI  
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310

[Close]

BLAST of Sgr029598 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 2.7e-16
Identity = 51/198 (25.76%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 97  DEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGL 156
           +E  + + W   L++F  +++Q+WY P    Y+KL+ ++GK  Q   A  LF  M + G 
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164

Query: 157 KPSIDVYTALVSAY----------------------VSDCKPDVHTYSILIDCCTKLHRF 216
           +P   VY AL++A+                      +  C+P+V TY+IL+    +  + 
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224

Query: 217 DLLKDILADMSYLGIASDGNQARRLDIQYYDQLIWESWNAYGKSGNIEKVDSVLRQIENS 273
           D +  +  D+    ++         D+  ++ ++    +AYGK+G I+++++VL ++ ++
Sbjct: 225 DQVNALFKDLDMSPVSP--------DVYTFNGVM----DAYGKNGMIKEMEAVLTRMRSN 284

[Close]

BLAST of Sgr029598 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 2.7e-16
Identity = 51/198 (25.76%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 97  DEAIEENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMLSEGL 156
           +E  + + W   L++F  +++Q+WY P    Y+KL+ ++GK  Q   A  LF  M + G 
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164

Query: 157 KPSIDVYTALVSAY----------------------VSDCKPDVHTYSILIDCCTKLHRF 216
           +P   VY AL++A+                      +  C+P+V TY+IL+    +  + 
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224

Query: 217 DLLKDILADMSYLGIASDGNQARRLDIQYYDQLIWESWNAYGKSGNIEKVDSVLRQIENS 273
           D +  +  D+    ++         D+  ++ ++    +AYGK+G I+++++VL ++ ++
Sbjct: 225 DQVNALFKDLDMSPVSP--------DVYTFNGVM----DAYGKNGMIKEMEAVLTRMRSN 284

The following BLAST results are available for this feature:

BLAST of Sgr029598 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153245.1	3.6e-100	51.16	pentatricopeptide repeat-containing protein At3g53170 [Momordica charantia]	[more]
XP_008461323.1	4.7e-100	51.07	PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cuc...	[more]
XP_008461329.1	4.7e-100	51.07	PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Cuc...	[more]
XP_038898944.1	6.2e-100	51.79	pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Benincasa hisp...	[more]
XP_022960242.1	5.8e-98	49.79	pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_0...	[more]

BLAST of Sgr029598 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCP4	2.3e-65	53.97	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX...	[more]
Q9FKC3	5.0e-36	35.29	Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop...	[more]
Q9SQU6	8.0e-26	29.50	Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop...	[more]
Q9SV96	3.7e-15	25.76	Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop...	[more]
A7LN87	8.6e-12	24.75	Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4...	[more]

BLAST of Sgr029598 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DG98	1.8e-100	51.16	pentatricopeptide repeat-containing protein At3g53170 OS=Momordica charantia OX=...	[more]
A0A1S3CEG4	2.3e-100	51.07	pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CFP9	2.3e-100	51.07	pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo...	[more]
A0A6J1HAD9	2.8e-98	49.79	pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3...	[more]
A0A0A0K9Q1	1.1e-97	50.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1	[more]

BLAST of Sgr029598 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53170.1	3.3e-67	52.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48730.1	3.6e-37	35.29	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G06430.1	5.7e-27	29.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39620.1	2.7e-16	25.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39620.2	2.7e-16	25.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..172 e-value: 7.8E-18 score: 66.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 173..328 e-value: 1.4E-16 score: 62.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 179..205 e-value: 0.0031 score: 15.6 coord: 127..159 e-value: 0.0014 score: 16.7 coord: 233..260 e-value: 7.4E-4 score: 17.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 180..209 e-value: 0.64 score: 10.4 coord: 233..254 e-value: 1.4 score: 9.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 125..171 e-value: 0.0011 score: 19.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 124..158 score: 9.218511
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 177..211 score: 8.878711
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..61
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 233..275 coord: 26..211
None	No IPR available	PANTHER	PTHR47933:SF35	OS03G0115300 PROTEIN	coord: 233..275 coord: 26..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr029598.1	Sgr029598.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding