Sgr029443 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr029443
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	eukaryotic translation initiation factor-related
Location	tig00153348: 1026277 .. 1026894 (-)
RNA-Seq Expression	Sgr029443
Synteny	Sgr029443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAGAAGAAAGTGAGTGGTAATACTATGACGCTCAAGGACTTTCACGGCGGCTCTATCCCTACTGATCTCCCTCTCCCATCTGCTCCTGGGGTGTATGTCTCGATTAACCTTGAAAATTATTTTCGTTTTATTGGTTTTCAATCCCTTTTTACTTTAATTTTTTAAAAAAATTTAATTTTAAGCAGAACTGGTACCTTTTTGTGGTATAGATTGTATTTTCACTTCTTAATGAGAATTTGTATTGAAAAACTGGATCCGTGTTATATAACCTTCTGGATCCTCCAGTTCATGCAATAATTTACTACTTTTTTTCGATTTATTAATCCGAAACTAGATCTGCAAGTGCAATTGGCTGATATCATTATTTTCCTCGCTTTTTGAAGAACCATTAGACCTTCAGATCGGACTAGTTTCGACCGACCTACATCGTGGGGGAACCCAATGAACAGGTCGGACCACCGGTCTAGGCCGCATTCATCTCCGGCAACCAGGCCTTTTGATGACAAAACTCCATTTCTCGCTCCTGCTGCATACATTGGTCGGAATTTCGACGAGGATGAAAGGAAACCCACCCCTCGGCGGTGTAACTCCCCCACGTCGAACCATCAGTGA

mRNA sequence

ATGTCGAAGAAGAAAGTGAGTGGTAATACTATGACGCTCAAGGACTTTCACGGCGGCTCTATCCCTACTGATCTCCCTCTCCCATCTGCTCCTGGGGTAACCATTAGACCTTCAGATCGGACTAGTTTCGACCGACCTACATCGTGGGGGAACCCAATGAACAGGTCGGACCACCGGTCTAGGCCGCATTCATCTCCGGCAACCAGGCCTTTTGATGACAAAACTCCATTTCTCGCTCCTGCTGCATACATTGGTCGGAATTTCGACGAGGATGAAAGGAAACCCACCCCTCGGCGGTGTAACTCCCCCACGTCGAACCATCAGTGA

Coding sequence (CDS)

ATGTCGAAGAAGAAAGTGAGTGGTAATACTATGACGCTCAAGGACTTTCACGGCGGCTCTATCCCTACTGATCTCCCTCTCCCATCTGCTCCTGGGGTAACCATTAGACCTTCAGATCGGACTAGTTTCGACCGACCTACATCGTGGGGGAACCCAATGAACAGGTCGGACCACCGGTCTAGGCCGCATTCATCTCCGGCAACCAGGCCTTTTGATGACAAAACTCCATTTCTCGCTCCTGCTGCATACATTGGTCGGAATTTCGACGAGGATGAAAGGAAACCCACCCCTCGGCGGTGTAACTCCCCCACGTCGAACCATCAGTGA

Protein sequence

MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRSRPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKPTPRRCNSPTSNHQ

Homology

[Close]

BLAST of Sgr029443 vs. NCBI nr
Match: XP_022139917.1 (uncharacterized protein LOC111010715 isoform X1 [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 8.0e-46
Identity = 97/110 (88.18%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVT+RPSDRTSFDRPTSWGNPMNRSDHRS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTVRPSDRTSFDRPTSWGNPMNRSDHRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAPAA+IGRNFDEDERKP      PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPAAHIGRNFDEDERKPLGGITPPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. NCBI nr
Match: XP_038894396.1 (uncharacterized protein LOC120083004 isoform X1 [Benincasa hispida])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 95/110 (86.36%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKK+VSGNTMTLKDFHGGSIPTDLPLPSAPGVT+RPSDRTSFDR TSWGNPMNRSDHRS
Sbjct: 1   MSKKRVSGNTMTLKDFHGGSIPTDLPLPSAPGVTVRPSDRTSFDRSTSWGNPMNRSDHRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAPAA+IGRNFDEDERKP      PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPAAHIGRNFDEDERKPLGGVTPPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. NCBI nr
Match: XP_008441653.1 (PREDICTED: uncharacterized protein LOC103485732 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 7.5e-44
Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKK++GNTMTLKDFHGGSIPTDLPLPSAPG+T+RPSDRTSFDRPTSWGN MNRSDHRS
Sbjct: 1   MSKKKLTGNTMTLKDFHGGSIPTDLPLPSAPGLTVRPSDRTSFDRPTSWGNSMNRSDHRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAPAA+IGRNFDEDERKP      PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPAAHIGRNFDEDERKPLGGVTPPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. NCBI nr
Match: XP_023001244.1 (uncharacterized protein LOC111495432 [Cucurbita maxima])

HSP 1 Score: 187.2 bits (474), Expect = 7.5e-44
Identity = 94/110 (85.45%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGV +RPSDRTSFDRPTSWGNPMNRSD RS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVNVRPSDRTSFDRPTSWGNPMNRSDPRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAP A+IGRNFDEDERKP     +PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPTAHIGRNFDEDERKPLGGVTSPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. NCBI nr
Match: XP_004153855.1 (uncharacterized protein LOC101208164 [Cucumis sativus] >KGN64584.1 hypothetical protein Csa_013823 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 7.5e-44
Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKK++GNTMTLKDFHGGSIPTDLPLPSAPG+T+RPSDRTSFDRPTSWGNPMNRSDHRS
Sbjct: 1   MSKKKLTGNTMTLKDFHGGSIPTDLPLPSAPGLTVRPSDRTSFDRPTSWGNPMNRSDHRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLA AA+IGRNFDEDERKP      PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLASAAHIGRNFDEDERKPLGGVTPPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. ExPASy TrEMBL
Match: A0A6J1CF93 (uncharacterized protein LOC111010715 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010715 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.9e-46
Identity = 97/110 (88.18%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVT+RPSDRTSFDRPTSWGNPMNRSDHRS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTVRPSDRTSFDRPTSWGNPMNRSDHRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAPAA+IGRNFDEDERKP      PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPAAHIGRNFDEDERKPLGGITPPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. ExPASy TrEMBL
Match: A0A6J1KM76 (uncharacterized protein LOC111495432 OS=Cucurbita maxima OX=3661 GN=LOC111495432 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 94/110 (85.45%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGV +RPSDRTSFDRPTSWGNPMNRSD RS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVNVRPSDRTSFDRPTSWGNPMNRSDPRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAP A+IGRNFDEDERKP     +PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPTAHIGRNFDEDERKPLGGVTSPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. ExPASy TrEMBL
Match: A0A0A0LUC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066530 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKK++GNTMTLKDFHGGSIPTDLPLPSAPG+T+RPSDRTSFDRPTSWGNPMNRSDHRS
Sbjct: 1   MSKKKLTGNTMTLKDFHGGSIPTDLPLPSAPGLTVRPSDRTSFDRPTSWGNPMNRSDHRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLA AA+IGRNFDEDERKP      PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLASAAHIGRNFDEDERKPLGGVTPPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. ExPASy TrEMBL
Match: A0A6J1EHY0 (uncharacterized protein LOC111434321 OS=Cucurbita moschata OX=3662 GN=LOC111434321 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 94/110 (85.45%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGV +RPSDRTSFDRPTSWGNPMNRSD RS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVNVRPSDRTSFDRPTSWGNPMNRSDPRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAP A+IGRNFDEDERKP     +PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPTAHIGRNFDEDERKPLGGVTSPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. ExPASy TrEMBL
Match: A0A1S3B3G0 (uncharacterized protein LOC103485732 OS=Cucumis melo OX=3656 GN=LOC103485732 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRS 60
           MSKKK++GNTMTLKDFHGGSIPTDLPLPSAPG+T+RPSDRTSFDRPTSWGN MNRSDHRS
Sbjct: 1   MSKKKLTGNTMTLKDFHGGSIPTDLPLPSAPGLTVRPSDRTSFDRPTSWGNSMNRSDHRS 60

Query: 61  RPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRRCNSPTS 106
           RPHSSPATR FDDKTPFLAPAA+IGRNFDEDERKP      PRR  S  S
Sbjct: 61  RPHSSPATRHFDDKTPFLAPAAHIGRNFDEDERKPLGGVTPPRRTISDES 110

[Close]

BLAST of Sgr029443 vs. TAIR 10
Match: AT1G11480.1 (eukaryotic translation initiation factor-related )

HSP 1 Score: 105.1 bits (261), Expect = 3.5e-23
Identity = 64/105 (60.95%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 1   MSKKKVSGNTMTLKDFHGGSIPTDLPLPSAPGVTIRP-SDRTSFDRPTSWGNPMNRSDHR 60
           MSKKK +   MTLKDFHGGSIP+DLPLPSAPGVT +   DR  FDR   WGN + R D R
Sbjct: 1   MSKKKSA--AMTLKDFHGGSIPSDLPLPSAPGVTPKVIPDRPVFDR-APWGNSIGRPDQR 60

Query: 61  SRPHSSPATRPFDDKTPFLAPAAYIGRNFDEDERKP-----TPRR 100
           +RP SS A R  DDK+ FL     IGRNF EDERKP      PRR
Sbjct: 61  ARPSSSHAIRNLDDKSLFLPHNVNIGRNFSEDERKPLDGHSAPRR 102

[Close]

BLAST of Sgr029443 vs. TAIR 10
Match: AT1G11480.2 (eukaryotic translation initiation factor-related )

HSP 1 Score: 60.5 bits (145), Expect = 9.8e-10
Identity = 41/84 (48.81%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 21  IPTDLPLPSAPGVTIRPSDRTSFDRPTSWGNPMNRSDHRSRPHSSPATRPFDDKTPFLAP 80
           I   LPL       + P DR  FDR   WGN + R D R+RP SS A R  DDK+ FL  
Sbjct: 8   ISLSLPLLECKTPKVIP-DRPVFDR-APWGNSIGRPDQRARPSSSHAIRNLDDKSLFLPH 67

Query: 81  AAYIGRNFDEDERKP-----TPRR 100
              IGRNF EDERKP      PRR
Sbjct: 68  NVNIGRNFSEDERKPLDGHSAPRR 89

The following BLAST results are available for this feature:

BLAST of Sgr029443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139917.1	8.0e-46	88.18	uncharacterized protein LOC111010715 isoform X1 [Momordica charantia]	[more]
XP_038894396.1	1.5e-44	86.36	uncharacterized protein LOC120083004 isoform X1 [Benincasa hispida]	[more]
XP_008441653.1	7.5e-44	84.55	PREDICTED: uncharacterized protein LOC103485732 [Cucumis melo]	[more]
XP_023001244.1	7.5e-44	85.45	uncharacterized protein LOC111495432 [Cucurbita maxima]	[more]
XP_004153855.1	7.5e-44	84.55	uncharacterized protein LOC101208164 [Cucumis sativus] >KGN64584.1 hypothetical ...	[more]

BLAST of Sgr029443 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr029443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CF93	3.9e-46	88.18	uncharacterized protein LOC111010715 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1KM76	3.6e-44	85.45	uncharacterized protein LOC111495432 OS=Cucurbita maxima OX=3661 GN=LOC111495432...	[more]
A0A0A0LUC6	3.6e-44	84.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G066530 PE=4 SV=1	[more]
A0A6J1EHY0	3.6e-44	85.45	uncharacterized protein LOC111434321 OS=Cucurbita moschata OX=3662 GN=LOC1114343...	[more]
A0A1S3B3G0	3.6e-44	84.55	uncharacterized protein LOC103485732 OS=Cucumis melo OX=3656 GN=LOC103485732 PE=...	[more]

BLAST of Sgr029443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11480.1	3.5e-23	60.95	eukaryotic translation initiation factor-related	[more]
AT1G11480.2	9.8e-10	48.81	eukaryotic translation initiation factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..108
None	No IPR available	PANTHER	PTHR32091:SF4	OS07G0546100 PROTEIN	coord: 1..100
IPR010433	Plant specific eukaryotic initiation factor 4B	PANTHER	PTHR32091	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr029443.1	Sgr029443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003743	translation initiation factor activity