Sgr029331 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr029331
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	DUF1771 domain-containing protein
Location	tig00153293: 1299155 .. 1299772 (-)
RNA-Seq Expression	Sgr029331
Synteny	Sgr029331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGAAAGGAAACATATGGAGTGAATGCATCAAAATATGGTAATGAGGAAGTGGTGCTCAAGTCTTTGCTTGATGCTTTTGGTTCTGCATTTTCACTTGATGAAATAGCTTCTGCTTATTTTAAGGCAGGCTATAATGCAGATTTGGCTGGTGAAATCCTGTACCAAATGCAGGGAAGCACCTCTAGCTCTGCATCCAATGGTGAGGTCGGAAATGAAGATAATTTGGGTAAAATTTCTGAGAAGTCATATCAGGCCAACGGGAACAGGAAAACTGCAAAGCCAAAGATTCAGCCTTTTTCAGCAGGCACAGTTTCCAGCGTTATTGGTAAAGAATATGCTAAGTCCAAGCCATCTGCAAATCAGTGTACTAAGGTATATAGACCAGTAAAGATGGGGGTAAAGGTTTTGCATGAATCTTTGAGTGAAGGAGATCATACAAGTTTCACTAGCGAGTCTCACCTACATCATGATATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAGAGGGAAGTGATTCGAGAAGTTCTTGGTAGGCTGTTCTCTTTTATCTTTGCCAGTTATCTTCAATTTGAAGTATCAAGTCATTACATTAGATAG

mRNA sequence

ATGACAGGAAAGGAAACATATGGAGTGAATGCATCAAAATATGGTAATGAGGAAGTGGTGCTCAAGTCTTTGCTTGATGCTTTTGGTTCTGCATTTTCACTTGATGAAATAGCTTCTGCTTATTTTAAGGCAGGCTATAATGCAGATTTGGCTGGTGAAATCCTGTACCAAATGCAGGGAAGCACCTCTAGCTCTGCATCCAATGGTGAGGTCGGAAATGAAGATAATTTGGGTAAAATTTCTGAGAAGTCATATCAGGCCAACGGGAACAGGAAAACTGCAAAGCCAAAGATTCAGCCTTTTTCAGCAGGCACAGTTTCCAGCGTTATTGGTAAAGAATATGCTAAGTCCAAGCCATCTGCAAATCAGTGTACTAAGGTATATAGACCAGTAAAGATGGGGGTAAAGGTTTTGCATGAATCTTTGAGTGAAGGAGATCATACAAGTTTCACTAGCGAGTCTCACCTACATCATGATATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAGAGGGAAGTGATTCGAGAAGTTCTTGGTAGGCTGTTCTCTTTTATCTTTGCCAGTTATCTTCAATTTGAAGTATCAAGTCATTACATTAGATAG

Coding sequence (CDS)

ATGACAGGAAAGGAAACATATGGAGTGAATGCATCAAAATATGGTAATGAGGAAGTGGTGCTCAAGTCTTTGCTTGATGCTTTTGGTTCTGCATTTTCACTTGATGAAATAGCTTCTGCTTATTTTAAGGCAGGCTATAATGCAGATTTGGCTGGTGAAATCCTGTACCAAATGCAGGGAAGCACCTCTAGCTCTGCATCCAATGGTGAGGTCGGAAATGAAGATAATTTGGGTAAAATTTCTGAGAAGTCATATCAGGCCAACGGGAACAGGAAAACTGCAAAGCCAAAGATTCAGCCTTTTTCAGCAGGCACAGTTTCCAGCGTTATTGGTAAAGAATATGCTAAGTCCAAGCCATCTGCAAATCAGTGTACTAAGGTATATAGACCAGTAAAGATGGGGGTAAAGGTTTTGCATGAATCTTTGAGTGAAGGAGATCATACAAGTTTCACTAGCGAGTCTCACCTACATCATGATATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAGAGGGAAGTGATTCGAGAAGTTCTTGGTAGGCTGTTCTCTTTTATCTTTGCCAGTTATCTTCAATTTGAAGTATCAAGTCATTACATTAGATAG

Protein sequence

MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQGSTSSSASNGEVGNEDNLGKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPSANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREVIREVLGRLFSFIFASYLQFEVSSHYIR

Homology

[Close]

BLAST of Sgr029331 vs. NCBI nr
Match: XP_022142234.1 (putative nuclear RNA export factor SDE5 isoform X1 [Momordica charantia])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKE YGVNASK+G E+VVLKSLLDAFGS FSLDEIASAY KA Y+ADLA EILYQ QG
Sbjct: 1   MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQG 60

Query: 61  STSSSASNGEVGNEDNLGKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPS 120
           ST SSASNG++GN DNL K SE SYQ NG++KTAKPKIQPFSAGTVSSVIGKEYA+SK S
Sbjct: 61  STPSSASNGKIGNGDNLCKGSENSYQGNGSQKTAKPKIQPFSAGTVSSVIGKEYARSKSS 120

Query: 121 ANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREVIR 180
           ANQ T+VY+PVK+GVKVLHES SEGD T+FTSESHLH DME+FLFKMLGDGFRLKREVIR
Sbjct: 121 ANQFTQVYKPVKVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIR 180

Query: 181 EVLG 185
           EVLG
Sbjct: 181 EVLG 184

[Close]

BLAST of Sgr029331 vs. NCBI nr
Match: XP_022142235.1 (putative nuclear RNA export factor SDE5 isoform X2 [Momordica charantia])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKE YGVNASK+G E+VVLKSLLDAFGS FSLDEIASAY KA Y+ADLA EILYQ QG
Sbjct: 1   MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQG 60

Query: 61  STSSSASNGEVGNEDNLGKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPS 120
           ST SSASNG++GN DNL K SE SYQ NG++KTAKPKIQPFSAGTVSSVIGKEYA+SK S
Sbjct: 61  STPSSASNGKIGNGDNLCKGSENSYQGNGSQKTAKPKIQPFSAGTVSSVIGKEYARSKSS 120

Query: 121 ANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREVIR 180
           ANQ T+VY+PVK+GVKVLHES SEGD T+FTSESHLH DME+FLFKMLGDGFRLKREVIR
Sbjct: 121 ANQFTQVYKPVKVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIR 180

Query: 181 EVLG 185
           EVLG
Sbjct: 181 EVLG 184

[Close]

BLAST of Sgr029331 vs. NCBI nr
Match: XP_022142236.1 (putative nuclear RNA export factor SDE5 isoform X3 [Momordica charantia])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKE YGVNASK+G E+VVLKSLLDAFGS FSLDEIASAY KA Y+ADLA EILYQ QG
Sbjct: 1   MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQG 60

Query: 61  STSSSASNGEVGNEDNLGKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPS 120
           ST SSASNG++GN DNL K SE SYQ NG++KTAKPKIQPFSAGTVSSVIGKEYA+SK S
Sbjct: 61  STPSSASNGKIGNGDNLCKGSENSYQGNGSQKTAKPKIQPFSAGTVSSVIGKEYARSKSS 120

Query: 121 ANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREVIR 180
           ANQ T+VY+PVK+GVKVLHES SEGD T+FTSESHLH DME+FLFKMLGDGFRLKREVIR
Sbjct: 121 ANQFTQVYKPVKVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIR 180

Query: 181 EVLG 185
           EVLG
Sbjct: 181 EVLG 184

[Close]

BLAST of Sgr029331 vs. NCBI nr
Match: XP_023518772.1 (putative nuclear RNA export factor SDE5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 4.2e-72
Identity = 147/186 (79.03%), Postives = 161/186 (86.56%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKET GVN SK   E+ +LKSL DAFGSAFSL+EIASAY KAGYNADLAGEIL+QMQG
Sbjct: 1   MTGKETCGVNGSKCVEEDTMLKSLFDAFGSAFSLNEIASAYLKAGYNADLAGEILFQMQG 60

Query: 61  STSSSASNGEVGNEDNLG--KISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSK 120
           STSSSASNGE+GN DNLG  K+ EKSYQ  GN+KT K K+QPFSAGTVS+VIGKEYA+SK
Sbjct: 61  STSSSASNGELGNGDNLGQYKVLEKSYQVKGNQKTGKSKVQPFSAGTVSNVIGKEYARSK 120

Query: 121 PSANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREV 180
           PSAN  TKVY+PVK+GVK LHES SEGD T   S+ HLHHDMEDFLFKMLGDGF+LKREV
Sbjct: 121 PSANNITKVYKPVKVGVKALHESPSEGDCTGIPSDFHLHHDMEDFLFKMLGDGFKLKREV 180

Query: 181 IREVLG 185
           IREVLG
Sbjct: 181 IREVLG 186

[Close]

BLAST of Sgr029331 vs. NCBI nr
Match: XP_022926752.1 (putative nuclear RNA export factor SDE5 [Cucurbita moschata])

HSP 1 Score: 278.5 bits (711), Expect = 4.7e-71
Identity = 146/186 (78.49%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKET GVN SK   E+ +LKSL DAFGSAFSL+EIASAY KAGYNADLAGEIL+QMQG
Sbjct: 1   MTGKETCGVNGSKCVEEDTMLKSLFDAFGSAFSLNEIASAYLKAGYNADLAGEILFQMQG 60

Query: 61  STSSSASNGEVGNEDNLG--KISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSK 120
           STSSSASNGE+GN DNLG  K+ EKS Q  GN+KT K K+QPFSAGTVS+VIGKEYA+SK
Sbjct: 61  STSSSASNGELGNGDNLGQHKVFEKSNQVKGNQKTGKSKVQPFSAGTVSNVIGKEYARSK 120

Query: 121 PSANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREV 180
           PSAN  TKVY+PVK+GVK LHES SEGD T   S+ HLHHDMEDFLFKMLGDGF+LKREV
Sbjct: 121 PSANNITKVYKPVKVGVKALHESPSEGDCTGIPSDFHLHHDMEDFLFKMLGDGFKLKREV 180

Query: 181 IREVLG 185
           IREVLG
Sbjct: 181 IREVLG 186

[Close]

BLAST of Sgr029331 vs. ExPASy Swiss-Prot
Match: Q9LUQ3 (Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana OX=3702 GN=SDE5 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-19
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 21  LKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQGST---SSSASNGEVGNEDNL 80
           L+ LLD FGS FSLD+IA+AY +A  N D+AGEIL  M   T                 +
Sbjct: 17  LQVLLDTFGSRFSLDDIAAAYCQASQNVDVAGEILSAMAEKTPQCDQVEMKTATSKPTQV 76

Query: 81  GKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPSANQCTKVYRPVKMGVKV 140
               E   Q +   K  +PK    S GTVSSVIGKEYA+++P +N   +  +P+K+  + 
Sbjct: 77  YVPKEVPRQEDSKAKVWRPKRNSISNGTVSSVIGKEYARTRPISNAPKEATKPLKINSRD 136

Query: 141 LHESLSEGDHTSFTSESHLHH---DMEDFLFKMLGDGFRLKREVIREVLG 185
           + E+    +    ++E  +     D+E+F+ KMLG+GF+  +EVI +VLG
Sbjct: 137 IPETEIWSEEMRKSNEGKISRAPTDVEEFIVKMLGEGFQASQEVIHQVLG 186

[Close]

BLAST of Sgr029331 vs. ExPASy TrEMBL
Match: A0A6J1CL01 (putative nuclear RNA export factor SDE5 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012400 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.2e-76
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKE YGVNASK+G E+VVLKSLLDAFGS FSLDEIASAY KA Y+ADLA EILYQ QG
Sbjct: 1   MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQG 60

Query: 61  STSSSASNGEVGNEDNLGKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPS 120
           ST SSASNG++GN DNL K SE SYQ NG++KTAKPKIQPFSAGTVSSVIGKEYA+SK S
Sbjct: 61  STPSSASNGKIGNGDNLCKGSENSYQGNGSQKTAKPKIQPFSAGTVSSVIGKEYARSKSS 120

Query: 121 ANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREVIR 180
           ANQ T+VY+PVK+GVKVLHES SEGD T+FTSESHLH DME+FLFKMLGDGFRLKREVIR
Sbjct: 121 ANQFTQVYKPVKVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIR 180

Query: 181 EVLG 185
           EVLG
Sbjct: 181 EVLG 184

[Close]

BLAST of Sgr029331 vs. ExPASy TrEMBL
Match: A0A6J1CLL7 (putative nuclear RNA export factor SDE5 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012400 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.2e-76
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKE YGVNASK+G E+VVLKSLLDAFGS FSLDEIASAY KA Y+ADLA EILYQ QG
Sbjct: 1   MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQG 60

Query: 61  STSSSASNGEVGNEDNLGKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPS 120
           ST SSASNG++GN DNL K SE SYQ NG++KTAKPKIQPFSAGTVSSVIGKEYA+SK S
Sbjct: 61  STPSSASNGKIGNGDNLCKGSENSYQGNGSQKTAKPKIQPFSAGTVSSVIGKEYARSKSS 120

Query: 121 ANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREVIR 180
           ANQ T+VY+PVK+GVKVLHES SEGD T+FTSESHLH DME+FLFKMLGDGFRLKREVIR
Sbjct: 121 ANQFTQVYKPVKVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIR 180

Query: 181 EVLG 185
           EVLG
Sbjct: 181 EVLG 184

[Close]

BLAST of Sgr029331 vs. ExPASy TrEMBL
Match: A0A6J1CKC5 (putative nuclear RNA export factor SDE5 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012400 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.2e-76
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKE YGVNASK+G E+VVLKSLLDAFGS FSLDEIASAY KA Y+ADLA EILYQ QG
Sbjct: 1   MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQG 60

Query: 61  STSSSASNGEVGNEDNLGKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPS 120
           ST SSASNG++GN DNL K SE SYQ NG++KTAKPKIQPFSAGTVSSVIGKEYA+SK S
Sbjct: 61  STPSSASNGKIGNGDNLCKGSENSYQGNGSQKTAKPKIQPFSAGTVSSVIGKEYARSKSS 120

Query: 121 ANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREVIR 180
           ANQ T+VY+PVK+GVKVLHES SEGD T+FTSESHLH DME+FLFKMLGDGFRLKREVIR
Sbjct: 121 ANQFTQVYKPVKVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIR 180

Query: 181 EVLG 185
           EVLG
Sbjct: 181 EVLG 184

[Close]

BLAST of Sgr029331 vs. ExPASy TrEMBL
Match: A0A6J1EF95 (putative nuclear RNA export factor SDE5 OS=Cucurbita moschata OX=3662 GN=LOC111433779 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.3e-71
Identity = 146/186 (78.49%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKET GVN SK   E+ +LKSL DAFGSAFSL+EIASAY KAGYNADLAGEIL+QMQG
Sbjct: 1   MTGKETCGVNGSKCVEEDTMLKSLFDAFGSAFSLNEIASAYLKAGYNADLAGEILFQMQG 60

Query: 61  STSSSASNGEVGNEDNLG--KISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSK 120
           STSSSASNGE+GN DNLG  K+ EKS Q  GN+KT K K+QPFSAGTVS+VIGKEYA+SK
Sbjct: 61  STSSSASNGELGNGDNLGQHKVFEKSNQVKGNQKTGKSKVQPFSAGTVSNVIGKEYARSK 120

Query: 121 PSANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREV 180
           PSAN  TKVY+PVK+GVK LHES SEGD T   S+ HLHHDMEDFLFKMLGDGF+LKREV
Sbjct: 121 PSANNITKVYKPVKVGVKALHESPSEGDCTGIPSDFHLHHDMEDFLFKMLGDGFKLKREV 180

Query: 181 IREVLG 185
           IREVLG
Sbjct: 181 IREVLG 186

[Close]

BLAST of Sgr029331 vs. ExPASy TrEMBL
Match: A0A6J1KLP7 (putative nuclear RNA export factor SDE5 OS=Cucurbita maxima OX=3661 GN=LOC111496867 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.2e-69
Identity = 143/186 (76.88%), Postives = 159/186 (85.48%), Query Frame = 0


Query: 1   MTGKETYGVNASKYGNEEVVLKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQG 60
           MTGKET GVN SK   E+ +LKSL DAFGSAFSL+EIASAY KAGYNA+LA EIL+QMQG
Sbjct: 1   MTGKETCGVNGSKCVEEDTMLKSLFDAFGSAFSLNEIASAYLKAGYNANLACEILFQMQG 60

Query: 61  STSSSASNGEVGNEDNLG--KISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSK 120
           STSSSASNGE+GN DNLG  K+ EKSYQ  GN+KT K K+QPFSAGTVS+VIGKEYA+SK
Sbjct: 61  STSSSASNGELGNGDNLGQYKVFEKSYQVKGNQKTGKSKVQPFSAGTVSNVIGKEYARSK 120

Query: 121 PSANQCTKVYRPVKMGVKVLHESLSEGDHTSFTSESHLHHDMEDFLFKMLGDGFRLKREV 180
           PSAN  TKVY+PVK+GVK LHES  EG+ T   S+ HLHHDMEDFLFKMLGDGF+LKREV
Sbjct: 121 PSANNITKVYKPVKVGVKALHESPREGNCTGIPSDFHLHHDMEDFLFKMLGDGFKLKREV 180

Query: 181 IREVLG 185
           IREVLG
Sbjct: 181 IREVLG 186

[Close]

BLAST of Sgr029331 vs. TAIR 10
Match: AT3G15390.1 (silencing defective 5 )

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 21  LKSLLDAFGSAFSLDEIASAYFKAGYNADLAGEILYQMQGST---SSSASNGEVGNEDNL 80
           L+ LLD FGS FSLD+IA+AY +A  N D+AGEIL  M   T                 +
Sbjct: 17  LQVLLDTFGSRFSLDDIAAAYCQASQNVDVAGEILSAMAEKTPQCDQVEMKTATSKPTQV 76

Query: 81  GKISEKSYQANGNRKTAKPKIQPFSAGTVSSVIGKEYAKSKPSANQCTKVYRPVKMGVKV 140
               E   Q +   K  +PK    S GTVSSVIGKEYA+++P +N   +  +P+K+  + 
Sbjct: 77  YVPKEVPRQEDSKAKVWRPKRNSISNGTVSSVIGKEYARTRPISNAPKEATKPLKINSRD 136

Query: 141 LHESLSEGDHTSFTSESHLHH---DMEDFLFKMLGDGFRLKREVIREVLG 185
           + E+    +    ++E  +     D+E+F+ KMLG+GF+  +EVI +VLG
Sbjct: 137 IPETEIWSEEMRKSNEGKISRAPTDVEEFIVKMLGEGFQASQEVIHQVLG 186

The following BLAST results are available for this feature:

BLAST of Sgr029331 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142234.1	1.1e-75	83.15	putative nuclear RNA export factor SDE5 isoform X1 [Momordica charantia]	[more]
XP_022142235.1	1.1e-75	83.15	putative nuclear RNA export factor SDE5 isoform X2 [Momordica charantia]	[more]
XP_022142236.1	1.1e-75	83.15	putative nuclear RNA export factor SDE5 isoform X3 [Momordica charantia]	[more]
XP_023518772.1	4.2e-72	79.03	putative nuclear RNA export factor SDE5 [Cucurbita pepo subsp. pepo]	[more]
XP_022926752.1	4.7e-71	78.49	putative nuclear RNA export factor SDE5 [Cucurbita moschata]	[more]

BLAST of Sgr029331 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUQ3	1.5e-19	37.65	Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana OX=3702 GN=SDE5 ...	[more]

BLAST of Sgr029331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CL01	5.2e-76	83.15	putative nuclear RNA export factor SDE5 isoform X1 OS=Momordica charantia OX=367...	[more]
A0A6J1CLL7	5.2e-76	83.15	putative nuclear RNA export factor SDE5 isoform X3 OS=Momordica charantia OX=367...	[more]
A0A6J1CKC5	5.2e-76	83.15	putative nuclear RNA export factor SDE5 isoform X2 OS=Momordica charantia OX=367...	[more]
A0A6J1EF95	2.3e-71	78.49	putative nuclear RNA export factor SDE5 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KLP7	1.2e-69	76.88	putative nuclear RNA export factor SDE5 OS=Cucurbita maxima OX=3661 GN=LOC111496...	[more]

BLAST of Sgr029331 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15390.1	1.1e-20	37.65	silencing defective 5	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47872	NUCLEAR RNA EXPORT FACTOR SDE5-RELATED	coord: 5..185
None	No IPR available	PANTHER	PTHR47872:SF3	PROTEIN SILENCING DEFECTIVE PROTEIN	coord: 5..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr029331.1	Sgr029331.1	mRNA