Sgr028842 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028842
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Lipoyl synthase, chloroplastic
Location	tig00153207: 1235313 .. 1235777 (+)
RNA-Seq Expression	Sgr028842
Synteny	Sgr028842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCATCCTTCACTTTCAATTTCAAATCCTTCTTCTCCTTCCCATTCGCCTCTCCCATTTGTTAAGCCCCACAAGTTCTCCAATTATTCCGGGCGTTTTTGCCAGTCGGTTTCTGTAATTCGATGCGAGGCTGTGGATTCTTCTTCGCCGTCGAAGGTGGAGGCTGCGGCGGCGCAATCTTCTTCACTGCCATTCTCGAAGGCGAGTAAGCTGATGGAATCGGAAGAGGGTTCTTCCAAGGCGGGTCCGTATCCCGGAGGAATGGGACCCTACACCGGCAGAGACCCGAGTGTGAAGAAGCCTGGTTGGTTGAGGCAGCGTGCCCCTCAGGGAGAGAAGTTCCAGGAGGTCAAGGACTCGTTGTCCCGATTGAATCTCAATACTGTTTGCGAGGAGGCCCAATGCCCCAACATTGGAGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTTAGAATTTAG

mRNA sequence

ATGATTCATCCTTCACTTTCAATTTCAAATCCTTCTTCTCCTTCCCATTCGCCTCTCCCATTTGTTAAGCCCCACAAGTTCTCCAATTATTCCGGGCGTTTTTGCCAGTCGGTTTCTGTAATTCGATGCGAGGCTGTGGATTCTTCTTCGCCGTCGAAGGTGGAGGCTGCGGCGGCGCAATCTTCTTCACTGCCATTCTCGAAGGCGAGTAAGCTGATGGAATCGGAAGAGGGTTCTTCCAAGGCGGGTCCGTATCCCGGAGGAATGGGACCCTACACCGGCAGAGACCCGAGTGTGAAGAAGCCTGGTTGGTTGAGGCAGCGTGCCCCTCAGGGAGAGAAGTTCCAGGAGGTCAAGGACTCGTTGTCCCGATTGAATCTCAATACTGTTTGCGAGGAGGCCCAATGCCCCAACATTGGAGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTTAGAATTTAG

Coding sequence (CDS)

ATGATTCATCCTTCACTTTCAATTTCAAATCCTTCTTCTCCTTCCCATTCGCCTCTCCCATTTGTTAAGCCCCACAAGTTCTCCAATTATTCCGGGCGTTTTTGCCAGTCGGTTTCTGTAATTCGATGCGAGGCTGTGGATTCTTCTTCGCCGTCGAAGGTGGAGGCTGCGGCGGCGCAATCTTCTTCACTGCCATTCTCGAAGGCGAGTAAGCTGATGGAATCGGAAGAGGGTTCTTCCAAGGCGGGTCCGTATCCCGGAGGAATGGGACCCTACACCGGCAGAGACCCGAGTGTGAAGAAGCCTGGTTGGTTGAGGCAGCGTGCCCCTCAGGGAGAGAAGTTCCAGGAGGTCAAGGACTCGTTGTCCCGATTGAATCTCAATACTGTTTGCGAGGAGGCCCAATGCCCCAACATTGGAGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTTAGAATTTAG

Protein sequence

MIHPSLSISNPSSPSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAAQSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGEVSLSLSLSLPLRI

Homology

[Close]

BLAST of Sgr028842 vs. NCBI nr
Match: XP_022138946.1 (lipoyl synthase, chloroplastic [Momordica charantia])

HSP 1 Score: 217.6 bits (553), Expect = 7.4e-53
Identity = 115/141 (81.56%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 1   MIHPSLSISNPSSPSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAAQ 60
           MI PSLSISNPSSP  SPL F KPHKFSNYSGRFC  VSVIRCE V SS+ +    +++ 
Sbjct: 1   MIRPSLSISNPSSP--SPLQFPKPHKFSNYSGRFCPPVSVIRCEGVHSSAAA--AHSSSS 60

Query: 61  SSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKD 120
           SSSLPFSK S+ MES +GSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKF+EVKD
Sbjct: 61  SSSLPFSKVSENMESGDGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFEEVKD 120

Query: 121 SLSRLNLNTVCEEAQCPNIGE 142
           SLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 SLSRLNLNTVCEEAQCPNIGE 137

[Close]

BLAST of Sgr028842 vs. NCBI nr
Match: KAG6573763.1 (Lipoyl synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210.7 bits (535), Expect = 9.0e-51
Identity = 113/143 (79.02%), Postives = 119/143 (83.22%), Query Frame = 0


Query: 1   MIHPSLSISNPSS--PSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAA 60
           MIH S SISNPSS   SHSP  FVKPH+FSNY GR C    VIRC+AVDSSS S   A  
Sbjct: 1   MIHYSFSISNPSSSTSSHSPFQFVKPHRFSNYFGRSC---PVIRCDAVDSSSSSSKVAVE 60

Query: 61  AQSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEV 120
           + SSS P SK SK+MES+E SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQGEKFQEV
Sbjct: 61  SSSSSFPVSKVSKVMESQEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQGEKFQEV 120

Query: 121 KDSLSRLNLNTVCEEAQCPNIGE 142
           KDSLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 KDSLSRLNLNTVCEEAQCPNIGE 140

[Close]

BLAST of Sgr028842 vs. NCBI nr
Match: XP_022945153.1 (lipoyl synthase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-49
Identity = 112/148 (75.68%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MIHPSLSISNPSS--PSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPS-----K 60
           MIH S SISNPSS   SHSP  FVKPH+FSNY GR C    VIRC+AVDSSS S     +
Sbjct: 1   MIHYSFSISNPSSSTSSHSPFQFVKPHRFSNYFGRSC---PVIRCDAVDSSSSSSKVAVE 60

Query: 61  VEAAAAQSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGE 120
             ++++ SSS P SK SK+MES+E SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQGE
Sbjct: 61  SSSSSSSSSSFPVSKVSKVMESQEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQGE 120

Query: 121 KFQEVKDSLSRLNLNTVCEEAQCPNIGE 142
           KFQEVKDSLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 KFQEVKDSLSRLNLNTVCEEAQCPNIGE 145

[Close]

BLAST of Sgr028842 vs. NCBI nr
Match: XP_022966979.1 (lipoyl synthase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-49
Identity = 112/145 (77.24%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MIHPSLSISNPSS--PSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEA-- 60
           MIH S SISNPSS   SHSP  FVKPH+FSNY GRFC    +IRC+AVDSSS S   A  
Sbjct: 1   MIHYSFSISNPSSSTSSHSPFQFVKPHRFSNYFGRFC---PLIRCDAVDSSSSSSKVAVE 60

Query: 61  AAAQSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQ 120
           +++ SSS P SK SK+MES E SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQGEKFQ
Sbjct: 61  SSSSSSSFPVSKVSKVMESPEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQGEKFQ 120

Query: 121 EVKDSLSRLNLNTVCEEAQCPNIGE 142
           EVK+SLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 EVKNSLSRLNLNTVCEEAQCPNIGE 142

[Close]

BLAST of Sgr028842 vs. NCBI nr
Match: KAG7012836.1 (Lipoyl synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.9 bits (520), Expect = 4.9e-49
Identity = 113/150 (75.33%), Postives = 121/150 (80.67%), Query Frame = 0


Query: 1   MIHPSLSISNPSS--PSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEA-- 60
           MIH S SISNPSS   SHSP  FVKPH+FSNY GR C    VIRC+AVDSSS S   A  
Sbjct: 1   MIHYSFSISNPSSSTSSHSPFQFVKPHRFSNYFGRSC---PVIRCDAVDSSSSSSKVAVE 60

Query: 61  -----AAAQSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQ 120
                +++ SSS P SK SK+MES+E SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQ
Sbjct: 61  SSSSSSSSSSSSFPVSKVSKVMESQEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQ 120

Query: 121 GEKFQEVKDSLSRLNLNTVCEEAQCPNIGE 142
           GEKFQEVKDSLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 GEKFQEVKDSLSRLNLNTVCEEAQCPNIGE 147

[Close]

BLAST of Sgr028842 vs. ExPASy Swiss-Prot
Match: Q8LEE8 (Lipoyl synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP1P PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 5.9e-29
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 22  VKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAAQSSSLPFSKASKLMESEEGSSK 81
           +   K  ++S +F      IRCE+ D SSP + +A +  S     S   K +   EG  K
Sbjct: 16  ISTQKLHHHSSKFLNLGFRIRCESGDVSSPLRTKAVSLSSEMEDSSSLKKSLMELEG-KK 75

Query: 82  AGPYPGG---MGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPN 141
           + PYPGG   MGP+TGRDP+VKKP WLRQ+APQGE+FQEVK+SLSRLNLNTVCEEAQCPN
Sbjct: 76  SEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPN 135

[Close]

BLAST of Sgr028842 vs. ExPASy Swiss-Prot
Match: B9N2B0 (Lipoyl synthase 2, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-2 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.4e-27
Identity = 73/139 (52.52%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 7   SISNPSSPSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAAQSSSLPF 66
           S+S PS     P+P     K    S  FC S S IRCE+VD  S +K++A   Q+S+   
Sbjct: 5   SLSKPSFSLSIPIPKAPKSK----SSFFC-SYSKIRCESVDYPSLTKIDAKHPQNSTTIN 64

Query: 67  SKASKLMESEEGSSKAGPYP----GGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSL 126
           + +S     +  +++ GPYP    G MGPYTGRD + KKP WLRQRAPQGE+F+EVK+S+
Sbjct: 65  NGSSSSASVDLKNNEKGPYPYPGGGKMGPYTGRDLNEKKPEWLRQRAPQGERFEEVKESI 124

Query: 127 SRLNLNTVCEEAQCPNIGE 142
           SRLNLNTVC+EAQCPNIGE
Sbjct: 125 SRLNLNTVCQEAQCPNIGE 138

[Close]

BLAST of Sgr028842 vs. ExPASy Swiss-Prot
Match: B9I666 (Lipoyl synthase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-1 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 70/135 (51.85%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 7   SISNPSSPSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAAQSSSLPF 66
           S+S PS     P+P     K S     F  S S IRCE+VD  S SK++A   Q SS+  
Sbjct: 5   SLSKPSFSLSIPIPQPPKSKSS-----FLCSYSKIRCESVDYPSSSKIDAKHPQISSI-- 64

Query: 67  SKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLN 126
                       +S  G   G MG YTGRDP+VKKP WLRQ+APQGE++ EVK+SLSRL 
Sbjct: 65  ------------NSNGG---GKMGSYTGRDPNVKKPEWLRQKAPQGERYDEVKESLSRLK 117

Query: 127 LNTVCEEAQCPNIGE 142
           LNTVC+EAQCPNIGE
Sbjct: 125 LNTVCQEAQCPNIGE 117

[Close]

BLAST of Sgr028842 vs. ExPASy Swiss-Prot
Match: B9RX57 (Lipoyl synthase, chloroplastic OS=Ricinus communis OX=3988 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 89  MGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGE 142
           MGPYTGRDP+VKKP WLRQRAPQGE+FQEVK SLS L LNTVCEEAQCPNIGE
Sbjct: 53  MGPYTGRDPNVKKPEWLRQRAPQGERFQEVKHSLSSLKLNTVCEEAQCPNIGE 105

[Close]

BLAST of Sgr028842 vs. ExPASy Swiss-Prot
Match: B8B016 (Lipoyl synthase 2, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=LIP1P-2 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.8e-17
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 77  EGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQC 136
           EGS+ AG  P   GPYTGRDP+ +KP WLRQRA QGEK+  +++SL  L LNTVC EAQC
Sbjct: 56  EGSAVAGWAP--PGPYTGRDPAARKPAWLRQRAAQGEKYARLRESLGELKLNTVCVEAQC 115

Query: 137 PNIGE 142
           PNIGE
Sbjct: 116 PNIGE 118

[Close]

BLAST of Sgr028842 vs. ExPASy TrEMBL
Match: A0A6J1CB64 (Lipoyl synthase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009999 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.6e-53
Identity = 115/141 (81.56%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 1   MIHPSLSISNPSSPSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAAQ 60
           MI PSLSISNPSSP  SPL F KPHKFSNYSGRFC  VSVIRCE V SS+ +    +++ 
Sbjct: 1   MIRPSLSISNPSSP--SPLQFPKPHKFSNYSGRFCPPVSVIRCEGVHSSAAA--AHSSSS 60

Query: 61  SSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKD 120
           SSSLPFSK S+ MES +GSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKF+EVKD
Sbjct: 61  SSSLPFSKVSENMESGDGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFEEVKD 120

Query: 121 SLSRLNLNTVCEEAQCPNIGE 142
           SLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 SLSRLNLNTVCEEAQCPNIGE 137

[Close]

BLAST of Sgr028842 vs. ExPASy TrEMBL
Match: A0A6J1HVC4 (Lipoyl synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466525 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 112/145 (77.24%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MIHPSLSISNPSS--PSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEA-- 60
           MIH S SISNPSS   SHSP  FVKPH+FSNY GRFC    +IRC+AVDSSS S   A  
Sbjct: 1   MIHYSFSISNPSSSTSSHSPFQFVKPHRFSNYFGRFC---PLIRCDAVDSSSSSSKVAVE 60

Query: 61  AAAQSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQ 120
           +++ SSS P SK SK+MES E SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQGEKFQ
Sbjct: 61  SSSSSSSFPVSKVSKVMESPEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQGEKFQ 120

Query: 121 EVKDSLSRLNLNTVCEEAQCPNIGE 142
           EVK+SLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 EVKNSLSRLNLNTVCEEAQCPNIGE 142

[Close]

BLAST of Sgr028842 vs. ExPASy TrEMBL
Match: A0A6J1G009 (Lipoyl synthase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449476 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 112/148 (75.68%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MIHPSLSISNPSS--PSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPS-----K 60
           MIH S SISNPSS   SHSP  FVKPH+FSNY GR C    VIRC+AVDSSS S     +
Sbjct: 1   MIHYSFSISNPSSSTSSHSPFQFVKPHRFSNYFGRSC---PVIRCDAVDSSSSSSKVAVE 60

Query: 61  VEAAAAQSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGE 120
             ++++ SSS P SK SK+MES+E SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQGE
Sbjct: 61  SSSSSSSSSSFPVSKVSKVMESQEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQGE 120

Query: 121 KFQEVKDSLSRLNLNTVCEEAQCPNIGE 142
           KFQEVKDSLSRLNLNTVCEEAQCPNIGE
Sbjct: 121 KFQEVKDSLSRLNLNTVCEEAQCPNIGE 145

[Close]

BLAST of Sgr028842 vs. ExPASy TrEMBL
Match: A0A5D3CZE8 (Lipoyl synthase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.5e-47
Identity = 108/142 (76.06%), Postives = 117/142 (82.39%), Query Frame = 0


Query: 1   MIHPSLSISNPS-SPSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAA 60
           +IH SLSISN S S SHSPLPFVK   FSN+S RF +S+SVIRCEA+DSSS    E A  
Sbjct: 2   IIHSSLSISNQSPSSSHSPLPFVKLRNFSNHSLRFRRSISVIRCEALDSSSS---EVAVQ 61

Query: 61  QSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVK 120
            S S   S   ++ME +EGSSKAGPYPGGMGP+TGRDPSVKKPGWLRQRAPQGEKFQEVK
Sbjct: 62  SSYSSSSSVGGRVMEPQEGSSKAGPYPGGMGPHTGRDPSVKKPGWLRQRAPQGEKFQEVK 121

Query: 121 DSLSRLNLNTVCEEAQCPNIGE 142
           DSLSRLNLNTVCEEAQCPNIGE
Sbjct: 122 DSLSRLNLNTVCEEAQCPNIGE 140

[Close]

BLAST of Sgr028842 vs. ExPASy TrEMBL
Match: A0A1S3BDA7 (Lipoyl synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488790 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.5e-47
Identity = 108/142 (76.06%), Postives = 117/142 (82.39%), Query Frame = 0


Query: 1   MIHPSLSISNPS-SPSHSPLPFVKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAA 60
           +IH SLSISN S S SHSPLPFVK   FSN+S RF +S+SVIRCEA+DSSS    E A  
Sbjct: 2   IIHSSLSISNQSPSSSHSPLPFVKLRNFSNHSLRFRRSISVIRCEALDSSSS---EVAVQ 61

Query: 61  QSSSLPFSKASKLMESEEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVK 120
            S S   S   ++ME +EGSSKAGPYPGGMGP+TGRDPSVKKPGWLRQRAPQGEKFQEVK
Sbjct: 62  SSYSSSSSVGGRVMEPQEGSSKAGPYPGGMGPHTGRDPSVKKPGWLRQRAPQGEKFQEVK 121

Query: 121 DSLSRLNLNTVCEEAQCPNIGE 142
           DSLSRLNLNTVCEEAQCPNIGE
Sbjct: 122 DSLSRLNLNTVCEEAQCPNIGE 140

[Close]

BLAST of Sgr028842 vs. TAIR 10
Match: AT5G08415.1 (Radical SAM superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-30
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 22  VKPHKFSNYSGRFCQSVSVIRCEAVDSSSPSKVEAAAAQSSSLPFSKASKLMESEEGSSK 81
           +   K  ++S +F      IRCE+ D SSP + +A +  S     S   K +   EG  K
Sbjct: 16  ISTQKLHHHSSKFLNLGFRIRCESGDVSSPLRTKAVSLSSEMEDSSSLKKSLMELEG-KK 75

Query: 82  AGPYPGG---MGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPN 141
           + PYPGG   MGP+TGRDP+VKKP WLRQ+APQGE+FQEVK+SLSRLNLNTVCEEAQCPN
Sbjct: 76  SEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPN 135

[Close]

BLAST of Sgr028842 vs. TAIR 10
Match: AT2G20860.1 (lipoic acid synthase 1 )

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 101 KPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGE 142
           KP W+++  P GE++ ++K  L  L L+TVCEEA+CPN+GE
Sbjct: 73  KPKWMKESIPGGERYVQIKKKLRDLKLHTVCEEAKCPNLGE 113

The following BLAST results are available for this feature:

BLAST of Sgr028842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138946.1	7.4e-53	81.56	lipoyl synthase, chloroplastic [Momordica charantia]	[more]
KAG6573763.1	9.0e-51	79.02	Lipoyl synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945153.1	2.9e-49	75.68	lipoyl synthase, chloroplastic [Cucurbita moschata]	[more]
XP_022966979.1	2.9e-49	77.24	lipoyl synthase, chloroplastic [Cucurbita maxima]	[more]
KAG7012836.1	4.9e-49	75.33	Lipoyl synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of Sgr028842 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEE8	5.9e-29	56.91	Lipoyl synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP1P PE=1 SV=...	[more]
B9N2B0	9.4e-27	52.52	Lipoyl synthase 2, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-2 PE=3 ...	[more]
B9I666	9.8e-24	51.85	Lipoyl synthase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-1 PE=3 ...	[more]
B9RX57	3.5e-21	88.68	Lipoyl synthase, chloroplastic OS=Ricinus communis OX=3988 GN=LIP1P PE=3 SV=1	[more]
B8B016	6.8e-17	66.15	Lipoyl synthase 2, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=LIP1P...	[more]

BLAST of Sgr028842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CB64	3.6e-53	81.56	Lipoyl synthase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009999 PE...	[more]
A0A6J1HVC4	1.4e-49	77.24	Lipoyl synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466525 PE=3 ...	[more]
A0A6J1G009	1.4e-49	75.68	Lipoyl synthase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449476 PE=...	[more]
A0A5D3CZE8	6.5e-47	76.06	Lipoyl synthase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1P P...	[more]
A0A1S3BDA7	6.5e-47	76.06	Lipoyl synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488790 PE=3 SV=1	[more]

BLAST of Sgr028842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08415.1	4.2e-30	56.91	Radical SAM superfamily protein	[more]
AT2G20860.1	5.9e-08	51.22	lipoic acid synthase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031691	Lipoyl synthase, N-terminal	PFAM	PF16881	LIAS_N	coord: 98..136 e-value: 1.2E-9 score: 38.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..112
None	No IPR available	PANTHER	PTHR10949:SF32	LIPOYL SYNTHASE, CHLOROPLASTIC	coord: 39..142
IPR003698	Lipoyl synthase	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 39..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr028842.1	Sgr028842.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016992	lipoate synthase activity
molecular_function	GO:0102552	lipoyl synthase activity (acting on glycine-cleavage complex H protein
molecular_function	GO:0102553	lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
molecular_function	GO:0046872	metal ion binding