Sgr028794 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028794
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	protein EARLY FLOWERING 4-like
Location	tig00153206: 2129865 .. 2130251 (-)
RNA-Seq Expression	Sgr028794
Synteny	Sgr028794

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATAACAACCCCCGCCGGAAGACCAAAACGAAGCCGTCAGCGACGACCACCACCACGACCACGACCACGACCAGCGACGACGGCCGACACGACGGCTTCCCGGAGGAATCCGACGCCGAGGTCTGGTCGTCCTTCGACCACACCTTCCGCCAGGTCCAGTCGGTGCTTGACCGGAACAGAGCACTGATTCAGCAGGTGAACGAGAATCAACAGTCTCGAATCCCCAGCAACATGGTCGACAACGTGGCTTTGATCCAAGAACTCAACGGCAACATCTCCAAAGTCGTCTCCATGTACTCCGATTTCTCCTCCGATTTCTCCTCTGTCTTCAACCACAAACCCAGAAACGGCAAGCGGGGCAGCACCAACCCAAACGCTTGA

mRNA sequence

ATGGCCGATAACAACCCCCGCCGGAAGACCAAAACGAAGCCGTCAGCGACGACCACCACCACGACCACGACCACGACCAGCGACGACGGCCGACACGACGGCTTCCCGGAGGAATCCGACGCCGAGGTCTGGTCGTCCTTCGACCACACCTTCCGCCAGGTCCAGTCGGTGCTTGACCGGAACAGAGCACTGATTCAGCAGGTGAACGAGAATCAACAGTCTCGAATCCCCAGCAACATGGTCGACAACGTGGCTTTGATCCAAGAACTCAACGGCAACATCTCCAAAGTCGTCTCCATGTACTCCGATTTCTCCTCCGATTTCTCCTCTGTCTTCAACCACAAACCCAGAAACGGCAAGCGGGGCAGCACCAACCCAAACGCTTGA

Coding sequence (CDS)

ATGGCCGATAACAACCCCCGCCGGAAGACCAAAACGAAGCCGTCAGCGACGACCACCACCACGACCACGACCACGACCAGCGACGACGGCCGACACGACGGCTTCCCGGAGGAATCCGACGCCGAGGTCTGGTCGTCCTTCGACCACACCTTCCGCCAGGTCCAGTCGGTGCTTGACCGGAACAGAGCACTGATTCAGCAGGTGAACGAGAATCAACAGTCTCGAATCCCCAGCAACATGGTCGACAACGTGGCTTTGATCCAAGAACTCAACGGCAACATCTCCAAAGTCGTCTCCATGTACTCCGATTTCTCCTCCGATTTCTCCTCTGTCTTCAACCACAAACCCAGAAACGGCAAGCGGGGCAGCACCAACCCAAACGCTTGA

Protein sequence

MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVFNHKPRNGKRGSTNPNA

Homology

[Close]

BLAST of Sgr028794 vs. NCBI nr
Match: KAG6600929.1 (Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031565.1 Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.2 bits (544), Expect = 6.8e-52
Identity = 115/129 (89.15%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MAD NPRRK+KTKPSATTTTTTTTTTSDDGRHDGFP+E DA+VW+SFD TFRQVQSVLDR
Sbjct: 1   MADINPRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDAQVWASFDQTFRQVQSVLDR 60

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSS F NHK RNG
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNHKSRNG 120

Query: 121 KRGSTNPNA 129
           KRGS+NP+A
Sbjct: 121 KRGSSNPDA 129

[Close]

BLAST of Sgr028794 vs. NCBI nr
Match: XP_022956860.1 (protein EARLY FLOWERING 4-like [Cucurbita moschata] >XP_023534577.1 protein EARLY FLOWERING 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 4.4e-51
Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MAD NPRRK+KTKPSATTTTTTTTTTSDDGRHDGFP+E DA+VW+SFD TFRQVQSVLDR
Sbjct: 1   MADINPRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDAQVWASFDQTFRQVQSVLDR 60

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSS F N+K RNG
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNNKSRNG 120

Query: 121 KRGSTNPNA 129
           KRGS+NP+A
Sbjct: 121 KRGSSNPDA 129

[Close]

BLAST of Sgr028794 vs. NCBI nr
Match: XP_038892867.1 (protein EARLY FLOWERING 4-like [Benincasa hispida])

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-50
Identity = 117/131 (89.31%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSA-TTTTTTTTTTSDDGRHDG-FPEESDAEVWSSFDHTFRQVQSVL 60
           MADNNPRRK+K KPSA TTTTTTTTTTSDDG HDG FP+E DAEVW+SFD TFRQVQSVL
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTTSDDGPHDGDFPDEYDAEVWASFDQTFRQVQSVL 60

Query: 61  DRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPR 120
           DRNR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSS F NHKPR
Sbjct: 61  DRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSAFSNHKPR 120

Query: 121 NGKRGSTNPNA 129
           NGKRGS NPNA
Sbjct: 121 NGKRGSNNPNA 131

[Close]

BLAST of Sgr028794 vs. NCBI nr
Match: KAA0031907.1 (protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa])

HSP 1 Score: 209.5 bits (532), Expect = 1.7e-50
Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MADNNPRRK+K KPSATTTTTTTTTTSDD  HD FP+E DAEVW+SFD TFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 60

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F NHKPR+G
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 120

Query: 121 KRGSTNPNA 129
           KRG+TNP+A
Sbjct: 121 KRGTTNPDA 129

[Close]

BLAST of Sgr028794 vs. NCBI nr
Match: XP_008463236.2 (PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 1.7e-50
Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MADNNPRRK+K KPSATTTTTTTTTTSDD  HD FP+E DAEVW+SFD TFRQVQSVLDR
Sbjct: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F NHKPR+G
Sbjct: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189

Query: 121 KRGSTNPNA 129
           KRG+TNP+A
Sbjct: 190 KRGTTNPDA 198

[Close]

BLAST of Sgr028794 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-21
Identity = 55/83 (66.27%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 40  DAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVS 99
           D  +W + D  FRQVQSVLDRNR+LIQQVN+N QSR+  NM  NVALIQELNGNISKVV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 100 MYSDFSSDFSSVFNHKPRNGKRG 123
           MYSD ++ FSS F H  +NG  G
Sbjct: 82  MYSDLNTSFSSGF-HGGKNGHDG 103

[Close]

BLAST of Sgr028794 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 40  DAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVS 99
           D EVW +  + F++ Q  LD+NR LIQ+VNEN  SRIP N+  NV LI E+NGNIS+V+ 
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 100 MYSDFSSDFSSVFNHKPRNGKRGST 125
           +YSD S +F+  F+ + R  K G T
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDGDT 118

[Close]

BLAST of Sgr028794 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-12
Identity = 32/72 (44.44%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 38  ESDAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKV 97
           + D ++  +F+ +F QVQ++LD NR LI ++N+N +S+IP N+  NV LI+ELN N+ +V
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 98  VSMYSDFSSDFS 110
             +Y D S++FS
Sbjct: 75  AHLYVDLSNNFS 86

[Close]

BLAST of Sgr028794 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 40  DAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVS 99
           D ++  SF  +F  VQ +LD+NR LI ++N+N +S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 100 MYSDFSSDFS 110
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

[Close]

BLAST of Sgr028794 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 32  HDGFPE--ESDAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQE 91
           + GF E  + D ++  +F  +F QVQ +LD+NR LI ++N+N +S+   ++  NV LI+E
Sbjct: 10  YSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNVGLIRE 69

Query: 92  LNGNISKVVSMYSDFSSDFS 110
           LN NI  V S+Y D S  F+
Sbjct: 70  LNNNIRTVASLYGDLSHSFA 89

[Close]

BLAST of Sgr028794 vs. ExPASy TrEMBL
Match: A0A6J1GYX8 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51
Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MAD NPRRK+KTKPSATTTTTTTTTTSDDGRHDGFP+E DA+VW+SFD TFRQVQSVLDR
Sbjct: 1   MADINPRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDAQVWASFDQTFRQVQSVLDR 60

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSS F N+K RNG
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNNKSRNG 120

Query: 121 KRGSTNPNA 129
           KRGS+NP+A
Sbjct: 121 KRGSSNPDA 129

[Close]

BLAST of Sgr028794 vs. ExPASy TrEMBL
Match: A0A5A7SR92 (Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00230 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.1e-51
Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MADNNPRRK+K KPSATTTTTTTTTTSDD  HD FP+E DAEVW+SFD TFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 60

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F NHKPR+G
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 120

Query: 121 KRGSTNPNA 129
           KRG+TNP+A
Sbjct: 121 KRGTTNPDA 129

[Close]

BLAST of Sgr028794 vs. ExPASy TrEMBL
Match: A0A1S3CIT1 (uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.1e-51
Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MADNNPRRK+K KPSATTTTTTTTTTSDD  HD FP+E DAEVW+SFD TFRQVQSVLDR
Sbjct: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F NHKPR+G
Sbjct: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189

Query: 121 KRGSTNPNA 129
           KRG+TNP+A
Sbjct: 190 KRGTTNPDA 198

[Close]

BLAST of Sgr028794 vs. ExPASy TrEMBL
Match: A0A6J1IH33 (protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.0e-50
Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MA+ N RRK+KTKPSATTTTTTTTTTSDDGRHDGFP+E D +VW+SFD TFRQVQSVLDR
Sbjct: 1   MAEINHRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDPQVWASFDQTFRQVQSVLDR 60

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSS F NHK RNG
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNHKSRNG 120

Query: 121 KRGSTNPNA 129
           KRGS+NP+A
Sbjct: 121 KRGSSNPDA 129

[Close]

BLAST of Sgr028794 vs. ExPASy TrEMBL
Match: A0A0A0KM35 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 110/129 (85.27%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MADNNPRRKTKTKPSATTTTTTTTTTSDDGRHDGFPEESDAEVWSSFDHTFRQVQSVLDR 60
           MADNNPRRK+K KPSATTTTTTTTTTSDD  H  FP+E D EVW+SFD TFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60

Query: 61  NRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSVF-NHKPRNG 120
           NR LIQQVNEN QSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F NHKPR G
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120

Query: 121 KRGSTNPNA 129
           KRG+TNP+A
Sbjct: 121 KRGTTNPDA 129

[Close]

BLAST of Sgr028794 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22
Identity = 55/83 (66.27%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 40  DAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVS 99
           D  +W + D  FRQVQSVLDRNR+LIQQVN+N QSR+  NM  NVALIQELNGNISKVV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 100 MYSDFSSDFSSVFNHKPRNGKRG 123
           MYSD ++ FSS F H  +NG  G
Sbjct: 82  MYSDLNTSFSSGF-HGGKNGHDG 103

[Close]

BLAST of Sgr028794 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 40  DAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVS 99
           D EVW +  + F++ Q  LD+NR LIQ+VNEN  SRIP N+  NV LI E+NGNIS+V+ 
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 100 MYSDFSSDFSSVFNHKPRNGKRGST 125
           +YSD S +F+  F+ + R  K G T
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDGDT 118

[Close]

BLAST of Sgr028794 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 72.0 bits (175), Expect = 3.9e-13
Identity = 32/72 (44.44%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 38  ESDAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKV 97
           + D ++  +F+ +F QVQ++LD NR LI ++N+N +S+IP N+  NV LI+ELN N+ +V
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 98  VSMYSDFSSDFS 110
             +Y D S++FS
Sbjct: 75  AHLYVDLSNNFS 86

[Close]

BLAST of Sgr028794 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 67.4 bits (163), Expect = 9.5e-12
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 40  DAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVS 99
           D ++  SF  +F  VQ +LD+NR LI ++N+N +S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 100 MYSDFSSDFS 110
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

[Close]

BLAST of Sgr028794 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 67.4 bits (163), Expect = 9.5e-12
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 40  DAEVWSSFDHTFRQVQSVLDRNRALIQQVNENQQSRIPSNMVDNVALIQELNGNISKVVS 99
           D ++  SF  +F  VQ +LD+NR LI ++N+N +S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 100 MYSDFSSDFS 110
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

The following BLAST results are available for this feature:

BLAST of Sgr028794 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600929.1	6.8e-52	89.15	Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022956860.1	4.4e-51	88.37	protein EARLY FLOWERING 4-like [Cucurbita moschata] >XP_023534577.1 protein EARL...	[more]
XP_038892867.1	1.3e-50	89.31	protein EARLY FLOWERING 4-like [Benincasa hispida]	[more]
KAA0031907.1	1.7e-50	86.82	protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY F...	[more]
XP_008463236.2	1.7e-50	86.82	PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]	[more]

BLAST of Sgr028794 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04211	2.2e-21	66.27	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	4.8e-16	50.59	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]
Q8S8F5	5.5e-12	44.44	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	1.3e-10	45.71	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	1.9e-09	41.25	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]

BLAST of Sgr028794 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYX8	2.1e-51	88.37	protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=...	[more]
A0A5A7SR92	8.1e-51	86.82	Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CIT1	8.1e-51	86.82	uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=...	[more]
A0A6J1IH33	4.0e-50	86.82	protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 ...	[more]
A0A0A0KM35	1.5e-49	85.27	Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 S...	[more]

BLAST of Sgr028794 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40080.1	1.6e-22	66.27	Protein of unknown function (DUF1313)	[more]
AT2G29950.1	3.4e-17	50.59	ELF4-like 1	[more]
AT2G06255.1	3.9e-13	44.44	ELF4-like 3	[more]
AT1G17455.1	9.5e-12	45.71	ELF4-like 4	[more]
AT1G17455.2	9.5e-12	45.71	ELF4-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 39..117 e-value: 1.2E-35 score: 121.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..29
None	No IPR available	PANTHER	PTHR33469:SF5	PROTEIN EARLY FLOWERING 4	coord: 11..122
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 11..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr028794.1	Sgr028794.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0000122	negative regulation of transcription by RNA polymerase II
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0042753	positive regulation of circadian rhythm
biological_process	GO:0010017	red or far-red light signaling pathway
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0010114	response to red light
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription regulator complex
molecular_function	GO:0042803	protein homodimerization activity