Sgr028668 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028668
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	zinc finger CCCH domain-containing protein 20-like
Location	tig00153204: 3302724 .. 3304029 (+)
RNA-Seq Expression	Sgr028668
Synteny	Sgr028668

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGATCGGCGAATCGATGCTTCTGAATCCTGAGGCCGAGATTCTTCCGTGGGACTCGCTCGAAGATCCGGCCGCTGCAATCGCCTCCTACTTCACCAATCCGTACGTCTTCAACTCCAATGCCGGCGGCGGCGTGTCTTCTGTCGATTCGCCGACGGCGGTGGAGTTCGAGTCATTCTGCGATGAATATTTGCCTGCGGCGGTGGACGCGTTCTCCTGCGACCATTTCCGGATGTTCGAGTTCAAAGTACGTACGTGCGCGCGTGGGAGGTCTCACGATTGGACGAAATGTCCGTACGCGCATCCCGGCGAGAAGGCTCGCCGGAGGGATCCGAGAAAGTATCACTATTCCGGCACGGAATGTCCCGAGTTACGCCATGGGTGCTGTAAAAAAGGGGACGCGTGTGAGTACGCGCATGGAGTGTTCGAAAGTTGGCTCCACCCGGATCGTTACCGGACTCAGCCGTGCAGGGACGGGATGAGCTGCCGCCGTCGGGTGTGTTTCTTCGCGCACACGTCGGAGCAACTCCGAATTCCGTCGAAGCATAGCCTGAGGTCTCCACGGGCTAAGGGAACCTCTGTATCATCGCCGACGTCCATCCTAATCTCACCATCCATCTCCTCGTCGTCCGACTCGCCGCCCATGTCTCCGAACAGCCCTGTAACCGGCGGCGAATCGTTTGCATCAGCAAGCCGACTAGCTTCATTAATGCACAACCTCCAGCTTGACGATTTCAAGGGGACTCCGGTGGTCTCCGGCTTCAGTTCTCCTCGCGTTTCAAGTCTCCGACAACAGAGCCCGGCGCATTTGATCTGTGGGAAAAAGCTTACGAGGAAGAACCAGCAATGGAGAGGGTGGAGTCCGGGAGAGACCTGCGAGCCCAAATGTACGCGAAACTGATGAGAGAGAACTCGGTGGAGCGCGTCCGGTCGTCGTGCCGGCCGCTGGTGTCGGCTGGGTCGCGGAGCTAATGTGAGAAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCCACTTGCTTGCTTCCTTCGGCCATGGATTTTAGTTTCTCACTTGGGATTTCTCTGAAATTGTTTTATCGTTTCCGTTTTTGGTTTTGTGCAAATTCCTGTAAATGGGTTAATGTTAATATGTGGAGCGAGTCCATTCCATGTGTACAGAAACTGAAAGGAATAAATTTGTTTATATAACATCGGCTTCGAAATTGTTTTTGGTTGTTCCCTTGTCAGTGGAAACAGCCAGTTGCCAGTTGCCAGTTGACTCTCTAGATGTGGAGAAACTCAGGATAAGGTCAAAGGGGTAA

mRNA sequence

ATGATGATGATCGGCGAATCGATGCTTCTGAATCCTGAGGCCGAGATTCTTCCGTGGGACTCGCTCGAAGATCCGGCCGCTGCAATCGCCTCCTACTTCACCAATCCGTACGTCTTCAACTCCAATGCCGGCGGCGGCGTGTCTTCTGTCGATTCGCCGACGGCGGTGGAGTTCGAGTCATTCTGCGATGAATATTTGCCTGCGGCGGTGGACGCGTTCTCCTGCGACCATTTCCGGATGTTCGAGTTCAAAGTACGTACGTGCGCGCGTGGGAGGTCTCACGATTGGACGAAATGTCCGTACGCGCATCCCGGCGAGAAGGCTCGCCGGAGGGATCCGAGAAAGTATCACTATTCCGGCACGGAATGTCCCGAGTTACGCCATGGGTGCTGTAAAAAAGGGGACGCGTGTGAGTACGCGCATGGAGTGTTCGAAAGTTGGCTCCACCCGGATCGTTACCGGACTCAGCCGTGCAGGGACGGGATGAGCTGCCGCCGTCGGGTGTGTTTCTTCGCGCACACGTCGGAGCAACTCCGAATTCCGTCGAAGCATAGCCTGAGGTCTCCACGGGCTAAGGGAACCTCTGTATCATCGCCGACGTCCATCCTAATCTCACCATCCATCTCCTCGTCGTCCGACTCGCCGCCCATGTCTCCGAACAGCCCTGTAACCGGCGGCGAATCGTTTGCATCAGCAAGCCGACTAGCTTCATTAATGCACAACCTCCAGCTTGACGATTTCAAGGGGACTCCGGTGGTCTCCGGCTTCAGTTCTCCTCGCGTTTCAAGTCTCCGACAACAGAGCCCGGCGCATTTGATCTGTGGGAAAAAGCTTACGAGGAAGAACCAGCAATGGAGAGGGTGGAGTCCGGGAGAGACCTGCGAGCCCAAATTGGAAACAGCCAGTTGCCAGTTGCCAGTTGACTCTCTAGATGTGGAGAAACTCAGGATAAGGTCAAAGGGGTAA

Coding sequence (CDS)

ATGATGATGATCGGCGAATCGATGCTTCTGAATCCTGAGGCCGAGATTCTTCCGTGGGACTCGCTCGAAGATCCGGCCGCTGCAATCGCCTCCTACTTCACCAATCCGTACGTCTTCAACTCCAATGCCGGCGGCGGCGTGTCTTCTGTCGATTCGCCGACGGCGGTGGAGTTCGAGTCATTCTGCGATGAATATTTGCCTGCGGCGGTGGACGCGTTCTCCTGCGACCATTTCCGGATGTTCGAGTTCAAAGTACGTACGTGCGCGCGTGGGAGGTCTCACGATTGGACGAAATGTCCGTACGCGCATCCCGGCGAGAAGGCTCGCCGGAGGGATCCGAGAAAGTATCACTATTCCGGCACGGAATGTCCCGAGTTACGCCATGGGTGCTGTAAAAAAGGGGACGCGTGTGAGTACGCGCATGGAGTGTTCGAAAGTTGGCTCCACCCGGATCGTTACCGGACTCAGCCGTGCAGGGACGGGATGAGCTGCCGCCGTCGGGTGTGTTTCTTCGCGCACACGTCGGAGCAACTCCGAATTCCGTCGAAGCATAGCCTGAGGTCTCCACGGGCTAAGGGAACCTCTGTATCATCGCCGACGTCCATCCTAATCTCACCATCCATCTCCTCGTCGTCCGACTCGCCGCCCATGTCTCCGAACAGCCCTGTAACCGGCGGCGAATCGTTTGCATCAGCAAGCCGACTAGCTTCATTAATGCACAACCTCCAGCTTGACGATTTCAAGGGGACTCCGGTGGTCTCCGGCTTCAGTTCTCCTCGCGTTTCAAGTCTCCGACAACAGAGCCCGGCGCATTTGATCTGTGGGAAAAAGCTTACGAGGAAGAACCAGCAATGGAGAGGGTGGAGTCCGGGAGAGACCTGCGAGCCCAAATTGGAAACAGCCAGTTGCCAGTTGCCAGTTGACTCTCTAGATGTGGAGAAACTCAGGATAAGGTCAAAGGGGTAA

Protein sequence

MMMIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFESFCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQLRIPSKHSLRSPRAKGTSVSSPTSILISPSISSSSDSPPMSPNSPVTGGESFASASRLASLMHNLQLDDFKGTPVVSGFSSPRVSSLRQQSPAHLICGKKLTRKNQQWRGWSPGETCEPKLETASCQLPVDSLDVEKLRIRSKG

Homology

[Close]

BLAST of Sgr028668 vs. NCBI nr
Match: XP_022131988.1 (zinc finger CCCH domain-containing protein 23 [Momordica charantia])

HSP 1 Score: 369.0 bits (946), Expect = 4.1e-98
Identity = 192/267 (71.91%), Postives = 209/267 (78.28%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFESFC 62
           MI ESMLLNP A+ILPWDSLEDPAA  AS   NPY  NSNA G   S DSP   EFE F 
Sbjct: 1   MIAESMLLNPTAQILPWDSLEDPAAYFAS---NPYASNSNAAGHAPSPDSP--AEFEFFS 60

Query: 63  DEYLPAAV-DAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHYSGT 122
           DE  P AV DAFSCDHFRMF+FKVRTCARGRSHDWTKCPYAHPGEKARRRDPRK+ YSG 
Sbjct: 61  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGA 120

Query: 123 ECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQLRIP 182
           ECP+LR G CKKGD CE+AHGVFESWLHPDRYRTQ CRDGM+CRRRVCFFAH+SEQLRIP
Sbjct: 121 ECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMACRRRVCFFAHSSEQLRIP 180

Query: 183 SKHSLRSPRAKG---TSVSSPTSILISPSISSSSDSPPMSPNSPVTGGESFASASRLASL 242
           SK S+RSP A+G    ++SSPTSILISP     ++SPPM   SP TGGES     RLA+L
Sbjct: 181 SKQSIRSPLARGKGIAAISSPTSILISP-----TESPPM---SPTTGGESL---RRLAAL 240

Query: 243 MHNLQLDDFKGTPVVSGFSSPRVSSLR 266
           M NLQ+DD K +P  +G   PRVS LR
Sbjct: 241 MQNLQVDDLKLSPPAAGLGCPRVSCLR 251

[Close]

BLAST of Sgr028668 vs. NCBI nr
Match: KAG7029281.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.9 bits (912), Expect = 3.6e-94
Identity = 184/262 (70.23%), Postives = 205/262 (78.24%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTA--VEFES 62
           MI ESM LNP   I  WDSL+DPAAAI SYFT          G VS +DSPTA  ++++S
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFT---------AGNVSPLDSPTAAVMDYDS 60

Query: 63  --FCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 122
             + D+ LPA VDAF+CDHFRM+EFKVR CARGRSHDWTKCPYAH GEKARRRDPRK+ Y
Sbjct: 61  SLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFKY 120

Query: 123 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 182
           SGTECP+LRHGCC KGDACEYAHGVFE WLHPDRYRTQPCRDG  CRRRVCFFAH+SEQL
Sbjct: 121 SGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQL 180

Query: 183 RIPSKHSLRSPRAK---GTSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASASR 242
           RIP K S+RSPR +    ++VSSPTSIL    ISSSSDSPPMSP SP+ TGGESF   SR
Sbjct: 181 RIPGKQSIRSPRGREIAASAVSSPTSIL----ISSSSDSPPMSPISPLTTGGESF---SR 240

Query: 243 LASLMHNLQLDDFKGTPVVSGF 257
           L +LMHNL  D+ K  P +SGF
Sbjct: 241 LVALMHNLHFDELKTNPGISGF 246

[Close]

BLAST of Sgr028668 vs. NCBI nr
Match: XP_022997351.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima])

HSP 1 Score: 355.1 bits (910), Expect = 6.2e-94
Identity = 184/262 (70.23%), Postives = 205/262 (78.24%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTA--VEFES 62
           MI ESM LNP   I  WDSL+DPAAAI SYFT          G VS +DSPTA  ++++S
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFT---------AGNVSPLDSPTAAVMDYDS 60

Query: 63  --FCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 122
             + D+ LPA VDAF+CDHFRM+EFKVR CARGRSHDWTKCPYAH GEKARRRDPRK++Y
Sbjct: 61  SFWEDQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNY 120

Query: 123 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 182
           SGTECP+LRHGCC KGDACEYAHGVFE WLHPDRYRTQPCRDG  CRRRVCFFAH+SEQL
Sbjct: 121 SGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAVCRRRVCFFAHSSEQL 180

Query: 183 RIPSKHSLRSPRAK---GTSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASASR 242
           RIP K S+RSPR +     +VSSPTSIL    ISSSSDSPPMSP SP+ TGGESF   SR
Sbjct: 181 RIPGKQSIRSPRGREIAAPAVSSPTSIL----ISSSSDSPPMSPISPLATGGESF---SR 240

Query: 243 LASLMHNLQLDDFKGTPVVSGF 257
           L +LMHNL  D+ K  P +SGF
Sbjct: 241 LVALMHNLHFDELKTNPGISGF 246

[Close]

BLAST of Sgr028668 vs. NCBI nr
Match: KAG6598310.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.8 bits (909), Expect = 8.1e-94
Identity = 183/262 (69.85%), Postives = 205/262 (78.24%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTA--VEFES 62
           MI ESM LNP   I  WDSL+DPAAAI SYFT          G VS +DSPTA  ++++S
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFT---------AGNVSPLDSPTAAVMDYDS 60

Query: 63  --FCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 122
             + D+ LPA VDAF+CDHFRM+EFKVR CARGRSHDWTKCPYAH GEKARRRDPRK+ Y
Sbjct: 61  SLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFKY 120

Query: 123 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 182
           SGTECP+LRHGCC KGDAC+YAHGVFE WLHPDRYRTQPCRDG  CRRRVCFFAH+SEQL
Sbjct: 121 SGTECPDLRHGCCMKGDACDYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQL 180

Query: 183 RIPSKHSLRSPRAK---GTSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASASR 242
           RIP K S+RSPR +    ++VSSPTSIL    ISSSSDSPPMSP SP+ TGGESF   SR
Sbjct: 181 RIPGKQSIRSPRGREIAASAVSSPTSIL----ISSSSDSPPMSPISPLTTGGESF---SR 240

Query: 243 LASLMHNLQLDDFKGTPVVSGF 257
           L +LMHNL  D+ K  P +SGF
Sbjct: 241 LVALMHNLHFDELKTNPGISGF 246

[Close]

BLAST of Sgr028668 vs. NCBI nr
Match: XP_022961630.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 1.4e-93
Identity = 182/262 (69.47%), Postives = 204/262 (77.86%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTA--VEFES 62
           MI ESM LNP   I  WDSL+DPAAAI SYFT            VS +DSPTA  ++++S
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFT---------ADNVSPLDSPTAAVMDYDS 60

Query: 63  FC--DEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 122
               D+ LPA VDAF+CDHFRM+EFKVR CARGRSHDWTKCPYAH GEKARRRDPRK++Y
Sbjct: 61  LLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNY 120

Query: 123 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 182
           SGTECP+LRHGCC KGDACEYAHGVFE WLHPDRYRTQPCRDG  CRRRVCFFAH+SEQL
Sbjct: 121 SGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQL 180

Query: 183 RIPSKHSLRSPRAK---GTSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASASR 242
           RIP K S+RSPR +    ++VSSPTSIL    ISSSSDSPPMSP SP+ TGGESF   SR
Sbjct: 181 RIPGKQSIRSPRGREIAASAVSSPTSIL----ISSSSDSPPMSPISPLTTGGESF---SR 240

Query: 243 LASLMHNLQLDDFKGTPVVSGF 257
           L ++MHNL  D+ K  P +SGF
Sbjct: 241 LVAMMHNLHFDELKTNPGISGF 246

[Close]

BLAST of Sgr028668 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.2e-62
Identity = 140/286 (48.95%), Postives = 175/286 (61.19%), Query Frame = 0


Query: 2   MMIGESM-LLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFES 61
           MMIGE+    +P   I  WD + DP A I+S F++    N N+        SP    F S
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATISSPFSS---VNLNSVNDYPHSPSPYLDSFAS 60

Query: 62  FCDEYLPA-----------------AVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAH 121
               YLP+                   D+FS D FR++EFK+R CARGRSHDWT+CP+AH
Sbjct: 61  LF-RYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAH 120

Query: 122 PGEKARRRDPRKYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMS 181
           PGEKARRRDPRK+HYSGT CPE R G C++GD+CE++HGVFE WLHP RYRTQPC+DG S
Sbjct: 121 PGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTS 180

Query: 182 CRRRVCFFAHTSEQLRI-PSKHSLRSPRAKGTSVSSPTSILISPSISSSSDSPPMSPNSP 241
           CRRR+CFFAHT+EQLR+ P           G + +SPTSIL+SPS S  S+SPP+SP++ 
Sbjct: 181 CRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLA-TSPTSILVSPSFSPPSESPPLSPST- 240

Query: 242 VTGGESFASASRLASLMHNLQLDD---FKGTPVVSGFSSPRVSSLR 266
              GE  AS       M  +QL+       +P+ S    P  SSLR
Sbjct: 241 ---GELIAS-------MRKMQLNGGGCSWSSPMRSAVRLPFSSSLR 270

[Close]

BLAST of Sgr028668 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.9e-62
Identity = 143/283 (50.53%), Postives = 172/283 (60.78%), Query Frame = 0


Query: 2   MMIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNS------NAGGGVSSVDSPTA 61
           MMIGE+    P  EI PW  LE+      S F +P V NS       A  G+        
Sbjct: 1   MMIGETRRTYPTVEIPPWPVLEE---LTTSEFFSP-VMNSPDCSMLEALAGLQRYLPSNE 60

Query: 62  VEFESFCDEYLP-AAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPR 121
            + ES+ D   P + +DA+SCDHFRM++FKVR CARGRSHDWT+CPYAHPGEKARRRDPR
Sbjct: 61  PDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPR 120

Query: 122 KYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHT 181
           KYHYSGT CP+ R G CKKGD+CE+AHGVFE WLHP RYRTQPC+DG +C R++CFFAH+
Sbjct: 121 KYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHS 180

Query: 182 SEQLRIPSKHSLRSPRAKGTSVSSP-TSILISPSISSSSDSPPMSP-----NSPVTGGES 241
            +QLR    H+    R     VSSP  +     SIS  S SPPMSP     +SP+T   S
Sbjct: 181 PDQLRF--LHTRSPDRVDSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLS 240

Query: 242 ----FASASRLASLMHNLQLDDFKGTP---VVSGFSSPRVSSL 265
                 S + +     NLQ +  K  P    + GF SPR S L
Sbjct: 241 RSLGSCSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSPRGSIL 277

[Close]

BLAST of Sgr028668 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.1e-61
Identity = 141/298 (47.32%), Postives = 173/298 (58.05%), Query Frame = 0


Query: 2   MMIGESML-LNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFES 61
           MMIGES    NP   I PW   ED    ++  + +P        GG S +++   ++   
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSED--LTVSDIYGSP-------DGGSSMMEALAELQ--- 60

Query: 62  FCDEYLP----------------AAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHP 121
               YLP                + +DA++CDHFRM+EFKVR CARGRSHDWT+CPYAHP
Sbjct: 61  ---RYLPSNEPDPDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHP 120

Query: 122 GEKARRRDPRKYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSC 181
           GEKARRRDPRK+HYSGT CPE R GCCK+GDACE++HGVFE WLHP RYRTQPC+DG +C
Sbjct: 121 GEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNC 180

Query: 182 RRRVCFFAHTSEQLRIPSKHSLRSPRAKGTSVSSPT-SILISPSISSSSDSPPMSPNSPV 241
           RRRVCFFAH+ +Q+R+    S    R     V SPT       SIS SS+SPP+SP    
Sbjct: 181 RRRVCFFAHSPDQIRVLPNQS--PDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDS 240

Query: 242 TGGESFASASRLASL-------MHNLQLDDFKGT----------PVVSGFSSPRVSSL 265
               S  S S  ++L       + NLQL+  K +             SGF SPR S L
Sbjct: 241 DSSCSLLSRSLGSNLGNDVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVL 281

[Close]

BLAST of Sgr028668 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.1e-59
Identity = 132/264 (50.00%), Postives = 158/264 (59.85%), Query Frame = 0


Query: 1   MMMIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFES 60
           MMM+GE +     + + PW  L  P + +        V     GGG    D  T     +
Sbjct: 1   MMMMGEGV-----SSVPPWSHL--PVSGVD-------VLGGGGGGG----DEMTPYVIAA 60

Query: 61  FCDEYLP------------------AAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYA 120
             D YLP                  AAVDA++CD FRM+EFKVR CARGRSHDWT+CP+A
Sbjct: 61  LRD-YLPANDVGVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFA 120

Query: 121 HPGEKARRRDPRKYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGM 180
           HPGEKARRRDPRKYHYSGT CP+ R G CK+GDACEYAHGVFE WLHP RYRTQPC+DG 
Sbjct: 121 HPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGT 180

Query: 181 SCRRRVCFFAHTSEQLRI-PSKHSLRSPRAKGTS-------------------------V 221
           +CRRRVCFFAHT +QLR+ P++ S  SPR+  +S                          
Sbjct: 181 ACRRRVCFFAHTPDQLRVLPAQQS--SPRSVASSPLAESYDGSPLRRQAFESYLTKTIMS 240

[Close]

BLAST of Sgr028668 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.2e-55
Identity = 123/258 (47.67%), Postives = 152/258 (58.91%), Query Frame = 0


Query: 1   MMMIGESMLLNPEAEIL--PWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEF 60
           MMM+GE     P  + +  P   +E      +     PY         + S ++  A + 
Sbjct: 1   MMMMGEGAHAPPWQQHVASPVSGVEGGGGRESEVVAAPYHLLDTLRHYLPSNEAAAAEDE 60

Query: 61  ESFCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 120
           E      + AAVDA++CD FRM+EFKVR CARGRSHDWT+CP+AHPGEKARRRDPR+Y Y
Sbjct: 61  EEAA--AVAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCY 120

Query: 121 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 180
           SGT CP+ R G CK+GDACE+AHGVFE WLHP RYRTQPC+DG +CRRRVCFFAHT +QL
Sbjct: 121 SGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQL 180

Query: 181 RI--PS-KHSLRSPR--------------------------------AKGTSVSSPTSIL 222
           R+  PS +    SPR                                 K    SSPTS L
Sbjct: 181 RVLPPSQQQGSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESYLTKSIMSSSPTSTL 240

[Close]

BLAST of Sgr028668 vs. ExPASy TrEMBL
Match: A0A6J1BV05 (zinc finger CCCH domain-containing protein 23 OS=Momordica charantia OX=3673 GN=LOC111004968 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 2.0e-98
Identity = 192/267 (71.91%), Postives = 209/267 (78.28%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFESFC 62
           MI ESMLLNP A+ILPWDSLEDPAA  AS   NPY  NSNA G   S DSP   EFE F 
Sbjct: 1   MIAESMLLNPTAQILPWDSLEDPAAYFAS---NPYASNSNAAGHAPSPDSP--AEFEFFS 60

Query: 63  DEYLPAAV-DAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHYSGT 122
           DE  P AV DAFSCDHFRMF+FKVRTCARGRSHDWTKCPYAHPGEKARRRDPRK+ YSG 
Sbjct: 61  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGA 120

Query: 123 ECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQLRIP 182
           ECP+LR G CKKGD CE+AHGVFESWLHPDRYRTQ CRDGM+CRRRVCFFAH+SEQLRIP
Sbjct: 121 ECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMACRRRVCFFAHSSEQLRIP 180

Query: 183 SKHSLRSPRAKG---TSVSSPTSILISPSISSSSDSPPMSPNSPVTGGESFASASRLASL 242
           SK S+RSP A+G    ++SSPTSILISP     ++SPPM   SP TGGES     RLA+L
Sbjct: 181 SKQSIRSPLARGKGIAAISSPTSILISP-----TESPPM---SPTTGGESL---RRLAAL 240

Query: 243 MHNLQLDDFKGTPVVSGFSSPRVSSLR 266
           M NLQ+DD K +P  +G   PRVS LR
Sbjct: 241 MQNLQVDDLKLSPPAAGLGCPRVSCLR 251

[Close]

BLAST of Sgr028668 vs. ExPASy TrEMBL
Match: A0A6J1K790 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111492294 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 3.0e-94
Identity = 184/262 (70.23%), Postives = 205/262 (78.24%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTA--VEFES 62
           MI ESM LNP   I  WDSL+DPAAAI SYFT          G VS +DSPTA  ++++S
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFT---------AGNVSPLDSPTAAVMDYDS 60

Query: 63  --FCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 122
             + D+ LPA VDAF+CDHFRM+EFKVR CARGRSHDWTKCPYAH GEKARRRDPRK++Y
Sbjct: 61  SFWEDQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNY 120

Query: 123 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 182
           SGTECP+LRHGCC KGDACEYAHGVFE WLHPDRYRTQPCRDG  CRRRVCFFAH+SEQL
Sbjct: 121 SGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAVCRRRVCFFAHSSEQL 180

Query: 183 RIPSKHSLRSPRAK---GTSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASASR 242
           RIP K S+RSPR +     +VSSPTSIL    ISSSSDSPPMSP SP+ TGGESF   SR
Sbjct: 181 RIPGKQSIRSPRGREIAAPAVSSPTSIL----ISSSSDSPPMSPISPLATGGESF---SR 240

Query: 243 LASLMHNLQLDDFKGTPVVSGF 257
           L +LMHNL  D+ K  P +SGF
Sbjct: 241 LVALMHNLHFDELKTNPGISGF 246

[Close]

BLAST of Sgr028668 vs. ExPASy TrEMBL
Match: A0A6J1HCT8 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111462347 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 6.7e-94
Identity = 182/262 (69.47%), Postives = 204/262 (77.86%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTA--VEFES 62
           MI ESM LNP   I  WDSL+DPAAAI SYFT            VS +DSPTA  ++++S
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFT---------ADNVSPLDSPTAAVMDYDS 60

Query: 63  FC--DEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 122
               D+ LPA VDAF+CDHFRM+EFKVR CARGRSHDWTKCPYAH GEKARRRDPRK++Y
Sbjct: 61  LLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNY 120

Query: 123 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 182
           SGTECP+LRHGCC KGDACEYAHGVFE WLHPDRYRTQPCRDG  CRRRVCFFAH+SEQL
Sbjct: 121 SGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQL 180

Query: 183 RIPSKHSLRSPRAK---GTSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASASR 242
           RIP K S+RSPR +    ++VSSPTSIL    ISSSSDSPPMSP SP+ TGGESF   SR
Sbjct: 181 RIPGKQSIRSPRGREIAASAVSSPTSIL----ISSSSDSPPMSPISPLTTGGESF---SR 240

Query: 243 LASLMHNLQLDDFKGTPVVSGF 257
           L ++MHNL  D+ K  P +SGF
Sbjct: 241 LVAMMHNLHFDELKTNPGISGF 246

[Close]

BLAST of Sgr028668 vs. ExPASy TrEMBL
Match: A0A5A7V5C0 (Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001160 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.5e-93
Identity = 188/276 (68.12%), Postives = 214/276 (77.54%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTA--VEFES 62
           MI ESMLLNP A I  WDSL+DP+AAI+SYF         + G VS +DSPTA  ++F+S
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYF---------SAGHVSPLDSPTAALMDFDS 60

Query: 63  --FCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYHY 122
             + D  LPA VD FSCD FRM+EFKVR+CARGRSHDWTKCPYAH GEKARRRDPRK++Y
Sbjct: 61  SLWEDPDLPAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNY 120

Query: 123 SGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQL 182
           SG ECP+LRHGCCKKGDACEYAHG FE WLHPDRYRTQPCRDG  CRRRVCFFAHTSEQL
Sbjct: 121 SGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQL 180

Query: 183 RIPSKHSLRSPRAKG---TSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASASR 242
           RIP K S+RSPRA+     +VSSPTSIL+SP    SSDSPP+SP SPV +GGESF   SR
Sbjct: 181 RIPGKQSVRSPRAREIAVPAVSSPTSILLSP----SSDSPPLSPISPVISGGESF---SR 240

Query: 243 LASLMHNLQLDDFKGTPVVSGFSSPRVSSLRQQSPA 271
           L +LMH+L+LD+ K  P VS FS     +LR+ S A
Sbjct: 241 LVALMHSLRLDELKTNPGVSSFS----PNLRRNSGA 256

[Close]

BLAST of Sgr028668 vs. ExPASy TrEMBL
Match: A0A6J1GGI4 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111454027 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 4.3e-93
Identity = 190/271 (70.11%), Postives = 211/271 (77.86%), Query Frame = 0


Query: 3   MIGESMLLNPEAEILPWDSLEDP-AAAIASYFTNPYVFNSNAGGGVSSVDSPT--AVEFE 62
           MI ESMLLNP A    WDSL+DP AAAI+SY T          G VS +DSPT   +EF+
Sbjct: 1   MITESMLLNPSAHFSSWDSLDDPTAAAISSYLT---------AGHVSPLDSPTRAVMEFD 60

Query: 63  S--FCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKYH 122
           S  + ++ LPAAVDAF+CD FRM+EFKVR+CARGRSHDWTKCPYAH GEKARRRDPRK++
Sbjct: 61  SSFWEEQELPAAVDAFTCDDFRMYEFKVRSCARGRSHDWTKCPYAHVGEKARRRDPRKFN 120

Query: 123 YSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHTSEQ 182
           YSGTECP LRHGCCKKGDACE+AHG FE WLHPDRYRTQPCRDG++CRRRVCFFAHT EQ
Sbjct: 121 YSGTECPALRHGCCKKGDACEFAHGTFEIWLHPDRYRTQPCRDGIACRRRVCFFAHTLEQ 180

Query: 183 LRIPSKHSLRSPRAK---GTSVSSPTSILISPSISSSSDSPPMSPNSPV-TGGESFASAS 242
           LRIP+K SL SPRA     ++V+SPTSILISP      DSPPMSP SPV TGGESF   S
Sbjct: 181 LRIPAKQSLMSPRAAKEIASAVTSPTSILISP------DSPPMSPISPVTTGGESF---S 240

Query: 243 RLASLMHNLQLDDFKGTPVVSGF-SSPRVSS 264
           RL  LMHNLQLD  K  P VSGF SSPR +S
Sbjct: 241 RLVPLMHNLQLDKSKKNPAVSGFDSSPRRNS 253

[Close]

BLAST of Sgr028668 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 140/286 (48.95%), Postives = 175/286 (61.19%), Query Frame = 0


Query: 2   MMIGESM-LLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFES 61
           MMIGE+    +P   I  WD + DP A I+S F++    N N+        SP    F S
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATISSPFSS---VNLNSVNDYPHSPSPYLDSFAS 60

Query: 62  FCDEYLPA-----------------AVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAH 121
               YLP+                   D+FS D FR++EFK+R CARGRSHDWT+CP+AH
Sbjct: 61  LF-RYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAH 120

Query: 122 PGEKARRRDPRKYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMS 181
           PGEKARRRDPRK+HYSGT CPE R G C++GD+CE++HGVFE WLHP RYRTQPC+DG S
Sbjct: 121 PGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTS 180

Query: 182 CRRRVCFFAHTSEQLRI-PSKHSLRSPRAKGTSVSSPTSILISPSISSSSDSPPMSPNSP 241
           CRRR+CFFAHT+EQLR+ P           G + +SPTSIL+SPS S  S+SPP+SP++ 
Sbjct: 181 CRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLA-TSPTSILVSPSFSPPSESPPLSPST- 240

Query: 242 VTGGESFASASRLASLMHNLQLDD---FKGTPVVSGFSSPRVSSLR 266
              GE  AS       M  +QL+       +P+ S    P  SSLR
Sbjct: 241 ---GELIAS-------MRKMQLNGGGCSWSSPMRSAVRLPFSSSLR 270

[Close]

BLAST of Sgr028668 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 140/286 (48.95%), Postives = 175/286 (61.19%), Query Frame = 0


Query: 2   MMIGESM-LLNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFES 61
           MMIGE+    +P   I  WD + DP A I+S F++    N N+        SP    F S
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATISSPFSS---VNLNSVNDYPHSPSPYLDSFAS 60

Query: 62  FCDEYLPA-----------------AVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAH 121
               YLP+                   D+FS D FR++EFK+R CARGRSHDWT+CP+AH
Sbjct: 61  LF-RYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAH 120

Query: 122 PGEKARRRDPRKYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMS 181
           PGEKARRRDPRK+HYSGT CPE R G C++GD+CE++HGVFE WLHP RYRTQPC+DG S
Sbjct: 121 PGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTS 180

Query: 182 CRRRVCFFAHTSEQLRI-PSKHSLRSPRAKGTSVSSPTSILISPSISSSSDSPPMSPNSP 241
           CRRR+CFFAHT+EQLR+ P           G + +SPTSIL+SPS S  S+SPP+SP++ 
Sbjct: 181 CRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLA-TSPTSILVSPSFSPPSESPPLSPST- 240

Query: 242 VTGGESFASASRLASLMHNLQLDD---FKGTPVVSGFSSPRVSSLR 266
              GE  AS       M  +QL+       +P+ S    P  SSLR
Sbjct: 241 ---GELIAS-------MRKMQLNGGGCSWSSPMRSAVRLPFSSSLR 270

[Close]

BLAST of Sgr028668 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.1e-63
Identity = 143/283 (50.53%), Postives = 172/283 (60.78%), Query Frame = 0


Query: 2   MMIGESMLLNPEAEILPWDSLEDPAAAIASYFTNPYVFNS------NAGGGVSSVDSPTA 61
           MMIGE+    P  EI PW  LE+      S F +P V NS       A  G+        
Sbjct: 1   MMIGETRRTYPTVEIPPWPVLEE---LTTSEFFSP-VMNSPDCSMLEALAGLQRYLPSNE 60

Query: 62  VEFESFCDEYLP-AAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPGEKARRRDPR 121
            + ES+ D   P + +DA+SCDHFRM++FKVR CARGRSHDWT+CPYAHPGEKARRRDPR
Sbjct: 61  PDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPR 120

Query: 122 KYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSCRRRVCFFAHT 181
           KYHYSGT CP+ R G CKKGD+CE+AHGVFE WLHP RYRTQPC+DG +C R++CFFAH+
Sbjct: 121 KYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHS 180

Query: 182 SEQLRIPSKHSLRSPRAKGTSVSSP-TSILISPSISSSSDSPPMSP-----NSPVTGGES 241
            +QLR    H+    R     VSSP  +     SIS  S SPPMSP     +SP+T   S
Sbjct: 181 PDQLRF--LHTRSPDRVDSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLS 240

Query: 242 ----FASASRLASLMHNLQLDDFKGTP---VVSGFSSPRVSSL 265
                 S + +     NLQ +  K  P    + GF SPR S L
Sbjct: 241 RSLGSCSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSPRGSIL 277

[Close]

BLAST of Sgr028668 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 238.4 bits (607), Expect = 7.8e-63
Identity = 141/298 (47.32%), Postives = 173/298 (58.05%), Query Frame = 0


Query: 2   MMIGESML-LNPEAEILPWDSLEDPAAAIASYFTNPYVFNSNAGGGVSSVDSPTAVEFES 61
           MMIGES    NP   I PW   ED    ++  + +P        GG S +++   ++   
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSED--LTVSDIYGSP-------DGGSSMMEALAELQ--- 60

Query: 62  FCDEYLP----------------AAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHP 121
               YLP                + +DA++CDHFRM+EFKVR CARGRSHDWT+CPYAHP
Sbjct: 61  ---RYLPSNEPDPDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHP 120

Query: 122 GEKARRRDPRKYHYSGTECPELRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSC 181
           GEKARRRDPRK+HYSGT CPE R GCCK+GDACE++HGVFE WLHP RYRTQPC+DG +C
Sbjct: 121 GEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNC 180

Query: 182 RRRVCFFAHTSEQLRIPSKHSLRSPRAKGTSVSSPT-SILISPSISSSSDSPPMSPNSPV 241
           RRRVCFFAH+ +Q+R+    S    R     V SPT       SIS SS+SPP+SP    
Sbjct: 181 RRRVCFFAHSPDQIRVLPNQS--PDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDS 240

Query: 242 TGGESFASASRLASL-------MHNLQLDDFKGT----------PVVSGFSSPRVSSL 265
               S  S S  ++L       + NLQL+  K +             SGF SPR S L
Sbjct: 241 DSSCSLLSRSLGSNLGNDVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVL 281

[Close]

BLAST of Sgr028668 vs. TAIR 10
Match: AT5G44260.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.4e-48
Identity = 114/265 (43.02%), Postives = 151/265 (56.98%), Query Frame = 0


Query: 48  SSVDSPTA--VEFESFCDEYLPAAVDAFSCDHFRMFEFKVRTCARGRSHDWTKCPYAHPG 107
           SSV SP     E + +C  Y   + D ++ DHFRM+EFK+R C R RSHDWT CP++HPG
Sbjct: 31  SSVSSPLRDYKEQKDYC--YDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPG 90

Query: 108 EKARRRDPRKYHYSGTECPEL-RHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGMSC 167
           EKARRRDPR++HY+G  CPE  RHG C +GD C +AHGVFE WLHP RYRT+ C+DG  C
Sbjct: 91  EKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHC 150

Query: 168 RRRVCFFAHTSEQLRI--PSKHSLRSPRAKGTSVSSPTSILI------------SPSIS- 227
           +R+VCFFAH+  QLR+  PS  +  S    G+  SSP S+L             SP+ + 
Sbjct: 151 KRKVCFFAHSPRQLRVLPPSPENHISGGCGGSPSSSPASVLSNKNNRCCLFCSHSPTSTL 210

Query: 228 -----SSSDSPPMSPNSPVTGGESFASASRLASLMHN---LQLDDFKGTPVVSGFSSPRV 287
                S S SPP+   SP    ++F+  SR  + + N     LD    T  ++  SS  V
Sbjct: 211 LNLSRSPSSSPPL---SPADKADAFSRLSRRRTAVLNELISSLDSLSLTEALAASSSSPV 270

The following BLAST results are available for this feature:

BLAST of Sgr028668 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131988.1	4.1e-98	71.91	zinc finger CCCH domain-containing protein 23 [Momordica charantia]	[more]
KAG7029281.1	3.6e-94	70.23	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]
XP_022997351.1	6.2e-94	70.23	zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima]	[more]
KAG6598310.1	8.1e-94	69.85	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]
XP_022961630.1	1.4e-93	69.47	zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]	[more]

BLAST of Sgr028668 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82307	2.2e-62	48.95	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	2.9e-62	50.53	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82199	1.1e-61	47.32	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FU27	5.1e-59	50.00	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L4N4	1.2e-55	47.67	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Sgr028668 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BV05	2.0e-98	71.91	zinc finger CCCH domain-containing protein 23 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1K790	3.0e-94	70.23	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HCT8	6.7e-94	69.47	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662...	[more]
A0A5A7V5C0	1.5e-93	68.12	Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1GGI4	4.3e-93	70.11	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Sgr028668 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25900.1	1.6e-63	48.95	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	1.6e-63	48.95	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	2.1e-63	50.53	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G19810.1	7.8e-63	47.32	CCCH-type zinc finger family protein	[more]
AT5G44260.1	2.4e-48	43.02	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	4.10.1000.10		coord: 114..186 e-value: 7.7E-7 score: 30.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..228
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 57..266
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 57..266
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 118..144 score: 10.577386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr028668.1	Sgr028668.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding