Sgr028463 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028463
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	protein sym-1
Location	tig00153145: 2600180 .. 2600575 (+)
RNA-Seq Expression	Sgr028463
Synteny	Sgr028463

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCCTGCGGCGTCACACTTTCTTTGAAACCTCCTCCACTTTGTAGTAGCTTGAGTTCTAATCGTGGACCCAGCTTACATTTCGGCCTCCAAGCTCGAAGTCTTGAAAACCCTGTTCAAATGAAGGGGACTGATGCCTGTTCTTTCCGCCATTCTTGCTCGAAGTACAATCATCGACTGGAGTTCAAGGATATAGATCGACGTCAAATGCAATGTGGGTCGCTGACATTTACGAGTTTCCGAATTTCAGCAACCTCTGGCGATGGCTCTGGCGATGGCTCTGGCTCTGGAGGAGGTGGTGGGGGATATGGAGGTTATGGTCATGAAAATAATGGAGGGAAAGAAGGGGATGGTGGAGAAGGCGGGAATGACTGGTCCTTCTTGTCATGGTAA

mRNA sequence

ATGGTTCCCTGCGGCGTCACACTTTCTTTGAAACCTCCTCCACTTTGTAGTAGCTTGAGTTCTAATCGTGGACCCAGCTTACATTTCGGCCTCCAAGCTCGAAGTCTTGAAAACCCTGTTCAAATGAAGGGGACTGATGCCTGTTCTTTCCGCCATTCTTGCTCGAAGTACAATCATCGACTGGAGTTCAAGGATATAGATCGACGTCAAATGCAATGTGGGTCGCTGACATTTACGAGTTTCCGAATTTCAGCAACCTCTGGCGATGGCTCTGGCGATGGCTCTGGCTCTGGAGGAGGTGGTGGGGGATATGGAGGTTATGGTCATGAAAATAATGGAGGGAAAGAAGGGGATGGTGGAGAAGGCGGGAATGACTGGTCCTTCTTGTCATGGTAA

Coding sequence (CDS)

ATGGTTCCCTGCGGCGTCACACTTTCTTTGAAACCTCCTCCACTTTGTAGTAGCTTGAGTTCTAATCGTGGACCCAGCTTACATTTCGGCCTCCAAGCTCGAAGTCTTGAAAACCCTGTTCAAATGAAGGGGACTGATGCCTGTTCTTTCCGCCATTCTTGCTCGAAGTACAATCATCGACTGGAGTTCAAGGATATAGATCGACGTCAAATGCAATGTGGGTCGCTGACATTTACGAGTTTCCGAATTTCAGCAACCTCTGGCGATGGCTCTGGCGATGGCTCTGGCTCTGGAGGAGGTGGTGGGGGATATGGAGGTTATGGTCATGAAAATAATGGAGGGAAAGAAGGGGATGGTGGAGAAGGCGGGAATGACTGGTCCTTCTTGTCATGGTAA

Protein sequence

MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHRLEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGGEGGNDWSFLSW

Homology

[Close]

BLAST of Sgr028463 vs. NCBI nr
Match: XP_022152060.1 (protein sym-1 [Momordica charantia] >XP_022152061.1 protein sym-1 [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 9.4e-41
Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MV CGVTLSLKPPPLC+  SSNRGP+LHFGLQA SLE PVQMKG  ACSFRH     NHR
Sbjct: 1   MVLCGVTLSLKPPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRH-----NHR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF+D+ R QMQCGSL FT+ RISA+SGDGSG GSGSGGG GGYGG   EN GG EGDGG
Sbjct: 61  LEFEDLGRLQMQCGSLRFTNLRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGG 120

Query: 121 EGGNDWSFLSW 132
           +GG DWSFLSW
Sbjct: 121 KGGKDWSFLSW 123

[Close]

BLAST of Sgr028463 vs. NCBI nr
Match: XP_008443214.1 (PREDICTED: protein SYM1 [Cucumis melo] >XP_008443215.1 PREDICTED: protein SYM1 [Cucumis melo] >KAA0053913.1 protein SYM1 [Cucumis melo var. makuwa] >TYK25492.1 protein SYM1 [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 8.8e-39
Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MVPCG+TLSLKPP LC+ +S N G    FGLQA  LE PVQMKGT  CSFRH     NHR
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRH-----NHR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF D+ RRQMQCGSL FT FRISA+SGDGSGDG GSG G GG+GGYGHEN+GG EGD G
Sbjct: 61  LEFNDVGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSG 120

Query: 121 EGGNDWSFLSW 132
           + GN+WSFLSW
Sbjct: 121 KSGNNWSFLSW 126

[Close]

BLAST of Sgr028463 vs. NCBI nr
Match: XP_011652163.1 (protein sym-1 [Cucumis sativus] >KGN59408.1 hypothetical protein Csa_001167 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 92/131 (70.23%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MVPCG+TLSLKPP LC+ +S N GP+  F LQA  L   VQMKGT  CSFRH     NHR
Sbjct: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRH-----NHR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF D+ RRQ QCG L FT FRISA+SGDGSGDG GSG G GGYGGYGHEN+GG EGD G
Sbjct: 61  LEFNDVGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSG 120

Query: 121 EGGNDWSFLSW 132
           +GGN+WSFLSW
Sbjct: 121 KGGNNWSFLSW 126

[Close]

BLAST of Sgr028463 vs. NCBI nr
Match: XP_023539960.1 (protein sym-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.6 bits (418), Expect = 2.8e-37
Identity = 91/127 (71.65%), Postives = 103/127 (81.10%), Query Frame = 0


Query: 5   GVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHRLEFK 64
           G TLSL+ PPLC+  + N GPSL FGLQ RSLE PVQ+KGT ACSF HS     HRLEFK
Sbjct: 5   GATLSLQHPPLCTRSTFNGGPSLRFGLQTRSLETPVQIKGTHACSFSHS-----HRLEFK 64

Query: 65  DIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGGEGGN 124
            + RRQMQCGSL FT+FRISA+SGDGSGDG GSGGGG GYGGYG E++GG EGD G+GG+
Sbjct: 65  VVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGGDGYGGYGREDSGGGEGDSGKGGD 124

Query: 125 DWSFLSW 132
           +WSFLSW
Sbjct: 125 NWSFLSW 126

[Close]

BLAST of Sgr028463 vs. NCBI nr
Match: XP_038903823.1 (protein sym-1 [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 6.3e-37
Identity = 92/131 (70.23%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MVPCG+TLSLKPP LC+    N GP   FGLQA  L  PVQMKGT  CSFRH     NHR
Sbjct: 3   MVPCGLTLSLKPPTLCTRFRFNGGPISGFGLQAPILGTPVQMKGTCVCSFRH-----NHR 62

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF D+ RRQMQ GSL FT+FRISA+SGDGSGDG GSGGG GGYGGYGHEN+GG EGD  
Sbjct: 63  LEFNDVGRRQMQRGSLRFTNFRISASSGDGSGDGFGSGGGDGGYGGYGHENSGGGEGDSD 122

Query: 121 EGGNDWSFLSW 132
           +GG++WS LSW
Sbjct: 123 KGGDNWSLLSW 128

[Close]

BLAST of Sgr028463 vs. ExPASy TrEMBL
Match: A0A6J1DGH9 (protein sym-1 OS=Momordica charantia OX=3673 GN=LOC111019867 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.6e-41
Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MV CGVTLSLKPPPLC+  SSNRGP+LHFGLQA SLE PVQMKG  ACSFRH     NHR
Sbjct: 1   MVLCGVTLSLKPPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRH-----NHR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF+D+ R QMQCGSL FT+ RISA+SGDGSG GSGSGGG GGYGG   EN GG EGDGG
Sbjct: 61  LEFEDLGRLQMQCGSLRFTNLRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGG 120

Query: 121 EGGNDWSFLSW 132
           +GG DWSFLSW
Sbjct: 121 KGGKDWSFLSW 123

[Close]

BLAST of Sgr028463 vs. ExPASy TrEMBL
Match: A0A1S3B718 (protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.3e-39
Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MVPCG+TLSLKPP LC+ +S N G    FGLQA  LE PVQMKGT  CSFRH     NHR
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRH-----NHR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF D+ RRQMQCGSL FT FRISA+SGDGSGDG GSG G GG+GGYGHEN+GG EGD G
Sbjct: 61  LEFNDVGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSG 120

Query: 121 EGGNDWSFLSW 132
           + GN+WSFLSW
Sbjct: 121 KSGNNWSFLSW 126

[Close]

BLAST of Sgr028463 vs. ExPASy TrEMBL
Match: A0A5D3DPM1 (Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.3e-39
Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MVPCG+TLSLKPP LC+ +S N G    FGLQA  LE PVQMKGT  CSFRH     NHR
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRH-----NHR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF D+ RRQMQCGSL FT FRISA+SGDGSGDG GSG G GG+GGYGHEN+GG EGD G
Sbjct: 61  LEFNDVGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSG 120

Query: 121 EGGNDWSFLSW 132
           + GN+WSFLSW
Sbjct: 121 KSGNNWSFLSW 126

[Close]

BLAST of Sgr028463 vs. ExPASy TrEMBL
Match: A0A0A0LC77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816700 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.7e-38
Identity = 92/131 (70.23%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MVPCG+TLSLKPP LC+ +S N GP+  F LQA  L   VQMKGT  CSFRH     NHR
Sbjct: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRH-----NHR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEF D+ RRQ QCG L FT FRISA+SGDGSGDG GSG G GGYGGYGHEN+GG EGD G
Sbjct: 61  LEFNDVGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSG 120

Query: 121 EGGNDWSFLSW 132
           +GGN+WSFLSW
Sbjct: 121 KGGNNWSFLSW 126

[Close]

BLAST of Sgr028463 vs. ExPASy TrEMBL
Match: A0A6J1I1Z8 (protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.2e-37
Identity = 92/131 (70.23%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MVPCGVTLSLKPPPLCSSLSSNRGPSLHFGLQARSLENPVQMKGTDACSFRHSCSKYNHR 60
           MV  G TLSL+ PPLC+  + N GPSL FGLQARSL+ PVQ+KGT ACSF HS     HR
Sbjct: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLKTPVQIKGTHACSFSHS-----HR 60

Query: 61  LEFKDIDRRQMQCGSLTFTSFRISATSGDGSGDGSGSGGGGGGYGGYGHENNGGKEGDGG 120
           LEFK + RRQMQCGSL FT+FRISA+SGDGSGDG GSGGG  GYGGYG E++GG EGD G
Sbjct: 61  LEFKVVGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGSDGYGGYGREDSGGGEGDSG 120

Query: 121 EGGNDWSFLSW 132
           +GG++WSFLSW
Sbjct: 121 KGGDNWSFLSW 126

The following BLAST results are available for this feature:

BLAST of Sgr028463 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152060.1	9.4e-41	76.34	protein sym-1 [Momordica charantia] >XP_022152061.1 protein sym-1 [Momordica cha...	[more]
XP_008443214.1	8.8e-39	71.76	PREDICTED: protein SYM1 [Cucumis melo] >XP_008443215.1 PREDICTED: protein SYM1 [...	[more]
XP_011652163.1	9.7e-38	70.23	protein sym-1 [Cucumis sativus] >KGN59408.1 hypothetical protein Csa_001167 [Cuc...	[more]
XP_023539960.1	2.8e-37	71.65	protein sym-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038903823.1	6.3e-37	70.23	protein sym-1 [Benincasa hispida]	[more]

BLAST of Sgr028463 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr028463 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGH9	4.6e-41	76.34	protein sym-1 OS=Momordica charantia OX=3673 GN=LOC111019867 PE=3 SV=1	[more]
A0A1S3B718	4.3e-39	71.76	protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1	[more]
A0A5D3DPM1	4.3e-39	71.76	Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 ...	[more]
A0A0A0LC77	4.7e-38	70.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816700 PE=3 SV=1	[more]
A0A6J1I1Z8	5.2e-37	70.23	protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1	[more]

BLAST of Sgr028463 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr028463.1	Sgr028463.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane