Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCACTGAATTCGAGAGATTCGCAACTGTCTCCTCCCTCTTCATCTTCTTCTTCCTTTTCTTCATACACAAAATCCGGATCCATCACTGATGAAGAAACTAAAACAGCTATTCAGAAGAACAATCGTAGCTGCAGAAATAAAGCCCAGAATCTAAGTCGCAGCAGTGGTTCAATGACCGTCGATAGCCTTCTCAGCAATGTTTACAAATCCAATGTCGATTCCGAAGTATCTTTAATCGACACTCGCAATCCCACTCATTTGCCCACCATGGATAGTAAGTTCAATGGCTCATCTACTGCTTCCAAATCTGTAGACGATCTATGGAGGGAGATTGTCGCCGGGAACAGGAAGGAGTTGAAGGATGAGGTCCTCGAAGAGATGATAACGTTGGAGGATTTTCTTCAAGCCAAAGCTCAGGAGGTGGATGCAGAGGAGATGAAGTTTTCGCATACAGAGAGGCTAAGCGGAGGAGGTGGTTCCGTTTGA
mRNA sequence
ATGGCGCCACTGAATTCGAGAGATTCGCAACTGTCTCCTCCCTCTTCATCTTCTTCTTCCTTTTCTTCATACACAAAATCCGGATCCATCACTGATGAAGAAACTAAAACAGCTATTCAGAAGAACAATCGTAGCTGCAGAAATAAAGCCCAGAATCTAAGTCGCAGCAGTGGTTCAATGACCGTCGATAGCCTTCTCAGCAATGTTTACAAATCCAATGTCGATTCCGAAGTATCTTTAATCGACACTCGCAATCCCACTCATTTGCCCACCATGGATAGTAAGTTCAATGGCTCATCTACTGCTTCCAAATCTGTAGACGATCTATGGAGGGAGATTGTCGCCGGGAACAGGAAGGAGTTGAAGGATGAGGTCCTCGAAGAGATGATAACGTTGGAGGATTTTCTTCAAGCCAAAGCTCAGGAGGTGGATGCAGAGGAGATGAAGTTTTCGCATACAGAGAGGCTAAGCGGAGGAGGTGGTTCCGTTTGA
Coding sequence (CDS)
ATGGCGCCACTGAATTCGAGAGATTCGCAACTGTCTCCTCCCTCTTCATCTTCTTCTTCCTTTTCTTCATACACAAAATCCGGATCCATCACTGATGAAGAAACTAAAACAGCTATTCAGAAGAACAATCGTAGCTGCAGAAATAAAGCCCAGAATCTAAGTCGCAGCAGTGGTTCAATGACCGTCGATAGCCTTCTCAGCAATGTTTACAAATCCAATGTCGATTCCGAAGTATCTTTAATCGACACTCGCAATCCCACTCATTTGCCCACCATGGATAGTAAGTTCAATGGCTCATCTACTGCTTCCAAATCTGTAGACGATCTATGGAGGGAGATTGTCGCCGGGAACAGGAAGGAGTTGAAGGATGAGGTCCTCGAAGAGATGATAACGTTGGAGGATTTTCTTCAAGCCAAAGCTCAGGAGGTGGATGCAGAGGAGATGAAGTTTTCGCATACAGAGAGGCTAAGCGGAGGAGGTGGTTCCGTTTGA
Protein sequence
MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSMTVDSLLSNVYKSNVDSEVSLIDTRNPTHLPTMDSKFNGSSTASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGGGGSV
Homology
BLAST of Sgr028359 vs. NCBI nr
Match:
XP_022134121.1 (G-box-binding factor 4-like isoform X3 [Momordica charantia])
HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS SS G +NR+ N LS S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66
Query: 61 TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
TVD LL N Y SN +D++++L+D+ NP+ P +D+ SS A K
Sbjct: 67 TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126
Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
+VDD+WREIV+G RKELK+EV +E+ITLEDFL K V E++K TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168
BLAST of Sgr028359 vs. NCBI nr
Match:
XP_022134119.1 (G-box-binding factor 4-like isoform X1 [Momordica charantia])
HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS SS G +NR+ N LS S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66
Query: 61 TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
TVD LL N Y SN +D++++L+D+ NP+ P +D+ SS A K
Sbjct: 67 TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126
Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
+VDD+WREIV+G RKELK+EV +E+ITLEDFL K V E++K TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168
BLAST of Sgr028359 vs. NCBI nr
Match:
XP_022134120.1 (G-box-binding factor 4-like isoform X2 [Momordica charantia])
HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS SS G +NR+ N LS S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66
Query: 61 TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
TVD LL N Y SN +D++++L+D+ NP+ P +D+ SS A K
Sbjct: 67 TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126
Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
+VDD+WREIV+G RKELK+EV +E+ITLEDFL K V E++K TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168
BLAST of Sgr028359 vs. NCBI nr
Match:
XP_023550818.1 (G-box-binding factor 4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 97.8 bits (242), Expect = 9.0e-17
Identity = 77/184 (41.85%), Postives = 107/184 (58.15%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS +S +S +++ ++ N+ RN+ S S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSASLLESQFLSNH-----LRNNDIPTRNR----SHSRSSM 66
Query: 61 TVDSLLSNVYKSN-------VDSEVSLIDTRNPTHLP-----------------TMDSKF 120
TVD LL N Y SN +D++++L+D+ NP+ LP +DS
Sbjct: 67 TVDGLLGNGYDSNPTESSILLDAQITLVDSHNPSSLPMNTTTTTTTTTTTNSSAVIDSNH 126
Query: 121 NGSS-TASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTER 160
N SS A K+VDD+WREIV+G RKELK+EV +E ITLED+L + + E++K TER
Sbjct: 127 NTSSGAAPKTVDDVWREIVSGERKELKEEVADEFITLEDYL-LRTGVMPVEDVKLPQTER 180
BLAST of Sgr028359 vs. NCBI nr
Match:
XP_022992992.1 (G-box-binding factor 4-like [Cucurbita maxima])
HSP 1 Score: 95.5 bits (236), Expect = 4.5e-16
Identity = 76/184 (41.30%), Postives = 106/184 (57.61%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS +S S +++ ++ N+ RN+ S S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSASLLGSQFLSNH-----LRNNDIPTRNR----SHSRSSM 66
Query: 61 TVDSLLSNVYKSN-------VDSEVSLIDTRNPTHLP-----------------TMDSKF 120
TVD LL N Y SN +D++++L+D+ NP+ LP +DS
Sbjct: 67 TVDGLLGNGYDSNPTESSILLDAQITLVDSHNPSSLPMNTTTTTTTTTTTNSSAVIDSNH 126
Query: 121 NGSS-TASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTER 160
N SS A K+VDD+WREIV+G RK+LK+EV +E ITLED+L + + E++K TER
Sbjct: 127 NTSSGAAPKTVDDVWREIVSGERKDLKEEVADEFITLEDYL-LRTGVMPVEDVKLPQTER 180
BLAST of Sgr028359 vs. ExPASy TrEMBL
Match:
A0A6J1BX24 (G-box-binding factor 4-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006469 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS SS G +NR+ N LS S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66
Query: 61 TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
TVD LL N Y SN +D++++L+D+ NP+ P +D+ SS A K
Sbjct: 67 TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126
Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
+VDD+WREIV+G RKELK+EV +E+ITLEDFL K V E++K TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168
BLAST of Sgr028359 vs. ExPASy TrEMBL
Match:
A0A6J1BX70 (G-box-binding factor 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006469 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS SS G +NR+ N LS S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66
Query: 61 TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
TVD LL N Y SN +D++++L+D+ NP+ P +D+ SS A K
Sbjct: 67 TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126
Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
+VDD+WREIV+G RKELK+EV +E+ITLEDFL K V E++K TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168
BLAST of Sgr028359 vs. ExPASy TrEMBL
Match:
A0A6J1BXX0 (G-box-binding factor 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006469 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS SS G +NR+ N LS S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66
Query: 61 TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
TVD LL N Y SN +D++++L+D+ NP+ P +D+ SS A K
Sbjct: 67 TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126
Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
+VDD+WREIV+G RKELK+EV +E+ITLEDFL K V E++K TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168
BLAST of Sgr028359 vs. ExPASy TrEMBL
Match:
A0A6J1JRH8 (G-box-binding factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489152 PE=4 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 2.2e-16
Identity = 76/184 (41.30%), Postives = 106/184 (57.61%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
+A NSR+S LS SSSSSS +S S +++ ++ N+ RN+ S S SM
Sbjct: 7 LASSNSRNSDLSRGSSSSSSSASLLGSQFLSNH-----LRNNDIPTRNR----SHSRSSM 66
Query: 61 TVDSLLSNVYKSN-------VDSEVSLIDTRNPTHLP-----------------TMDSKF 120
TVD LL N Y SN +D++++L+D+ NP+ LP +DS
Sbjct: 67 TVDGLLGNGYDSNPTESSILLDAQITLVDSHNPSSLPMNTTTTTTTTTTTNSSAVIDSNH 126
Query: 121 NGSS-TASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTER 160
N SS A K+VDD+WREIV+G RK+LK+EV +E ITLED+L + + E++K TER
Sbjct: 127 NTSSGAAPKTVDDVWREIVSGERKDLKEEVADEFITLEDYL-LRTGVMPVEDVKLPQTER 180
BLAST of Sgr028359 vs. ExPASy TrEMBL
Match:
A0A6J1HH29 (G-box-binding factor 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463986 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 3.7e-16
Identity = 73/172 (42.44%), Postives = 102/172 (59.30%), Query Frame = 0
Query: 2 APLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSMT 61
A SR+S LS SSSSSS S S+ + + + +NN + N+ +N S S SM
Sbjct: 8 ASSGSRNSDLSRGSSSSSS------SASLLNPQFLSNSSRNNDN--NRTRNRSHSLSSMN 67
Query: 62 VDSLLSNVYKSN------VDSEVSLIDTRNPTHLP--------TMDSKFNGSSTASKSVD 121
+D L+ + Y SN +D++++L+D+ P+ P +DS N SS A K+VD
Sbjct: 68 LDGLVRDGYDSNPTESILLDAQITLVDSPIPSTFPMNTTNSSAVIDSYHNTSSGAPKTVD 127
Query: 122 DLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
D+WREIV+G RKELK+EV +E+ITLEDFL K E++K TERLSGG
Sbjct: 128 DVWREIVSGERKELKEEVTDELITLEDFL-VKTGAAPVEDVKLPQTERLSGG 170
BLAST of Sgr028359 vs. TAIR 10
Match:
AT5G44080.1 (Basic-leucine zipper (bZIP) transcription factor family protein )
HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 0
Query: 1 MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
M NSR+S LS SS+S+ SS + ++ + + RN SS SM
Sbjct: 7 MRSSNSRNSDLSRRISSASTSSSSIR----PQQQFRRDLTSVGYGGRNDG---LYSSNSM 66
Query: 61 TVDSLLSNVYKSN---------VDSEVSLID-TRNPTHLPT---MDSKFNGSST----AS 120
TV+ +L + + S+ +D+ ++L+D + P + T D +G T
Sbjct: 67 TVEGILHDTFASDPPAPTESSLLDASINLMDASPAPMEITTTTASDVVDHGGGTETTRGG 126
Query: 121 KSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQE 143
KSVD++WRE+V+G K +K+E EE++TLEDFL A E
Sbjct: 127 KSVDEIWREMVSGEGKGMKEETSEEIMTLEDFLAKAAVE 158
BLAST of Sgr028359 vs. TAIR 10
Match:
AT1G03970.1 (G-box binding factor 4 )
HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0
Query: 104 KSVDDLWREIVAGNRKE--LKDEVLEEMITLEDFL-QAKAQEVDAEEMKFS-HTERLSGG 161
KSVDD+W+EIV+G +K +K+E E+++TLEDFL +A+ E ++E+ TERL+
Sbjct: 85 KSVDDVWKEIVSGEQKTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNND 144
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BX24 | 1.0e-18 | 45.14 | G-box-binding factor 4-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A6J1BX70 | 1.0e-18 | 45.14 | G-box-binding factor 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A6J1BXX0 | 1.0e-18 | 45.14 | G-box-binding factor 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A6J1JRH8 | 2.2e-16 | 41.30 | G-box-binding factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489152 PE=4 SV=... | [more] |
A0A6J1HH29 | 3.7e-16 | 42.44 | G-box-binding factor 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11146... | [more] |
Match Name | E-value | Identity | Description | |
AT5G44080.1 | 2.9e-05 | 32.70 | Basic-leucine zipper (bZIP) transcription factor family protein | [more] |
AT1G03970.1 | 1.9e-04 | 45.90 | G-box binding factor 4 | [more] |