Sgr028359 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr028359
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionG-box-binding factor 4-like
Locationtig00153057: 2270844 .. 2271335 (+)
RNA-Seq ExpressionSgr028359
SyntenySgr028359
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCACTGAATTCGAGAGATTCGCAACTGTCTCCTCCCTCTTCATCTTCTTCTTCCTTTTCTTCATACACAAAATCCGGATCCATCACTGATGAAGAAACTAAAACAGCTATTCAGAAGAACAATCGTAGCTGCAGAAATAAAGCCCAGAATCTAAGTCGCAGCAGTGGTTCAATGACCGTCGATAGCCTTCTCAGCAATGTTTACAAATCCAATGTCGATTCCGAAGTATCTTTAATCGACACTCGCAATCCCACTCATTTGCCCACCATGGATAGTAAGTTCAATGGCTCATCTACTGCTTCCAAATCTGTAGACGATCTATGGAGGGAGATTGTCGCCGGGAACAGGAAGGAGTTGAAGGATGAGGTCCTCGAAGAGATGATAACGTTGGAGGATTTTCTTCAAGCCAAAGCTCAGGAGGTGGATGCAGAGGAGATGAAGTTTTCGCATACAGAGAGGCTAAGCGGAGGAGGTGGTTCCGTTTGA

mRNA sequence

ATGGCGCCACTGAATTCGAGAGATTCGCAACTGTCTCCTCCCTCTTCATCTTCTTCTTCCTTTTCTTCATACACAAAATCCGGATCCATCACTGATGAAGAAACTAAAACAGCTATTCAGAAGAACAATCGTAGCTGCAGAAATAAAGCCCAGAATCTAAGTCGCAGCAGTGGTTCAATGACCGTCGATAGCCTTCTCAGCAATGTTTACAAATCCAATGTCGATTCCGAAGTATCTTTAATCGACACTCGCAATCCCACTCATTTGCCCACCATGGATAGTAAGTTCAATGGCTCATCTACTGCTTCCAAATCTGTAGACGATCTATGGAGGGAGATTGTCGCCGGGAACAGGAAGGAGTTGAAGGATGAGGTCCTCGAAGAGATGATAACGTTGGAGGATTTTCTTCAAGCCAAAGCTCAGGAGGTGGATGCAGAGGAGATGAAGTTTTCGCATACAGAGAGGCTAAGCGGAGGAGGTGGTTCCGTTTGA

Coding sequence (CDS)

ATGGCGCCACTGAATTCGAGAGATTCGCAACTGTCTCCTCCCTCTTCATCTTCTTCTTCCTTTTCTTCATACACAAAATCCGGATCCATCACTGATGAAGAAACTAAAACAGCTATTCAGAAGAACAATCGTAGCTGCAGAAATAAAGCCCAGAATCTAAGTCGCAGCAGTGGTTCAATGACCGTCGATAGCCTTCTCAGCAATGTTTACAAATCCAATGTCGATTCCGAAGTATCTTTAATCGACACTCGCAATCCCACTCATTTGCCCACCATGGATAGTAAGTTCAATGGCTCATCTACTGCTTCCAAATCTGTAGACGATCTATGGAGGGAGATTGTCGCCGGGAACAGGAAGGAGTTGAAGGATGAGGTCCTCGAAGAGATGATAACGTTGGAGGATTTTCTTCAAGCCAAAGCTCAGGAGGTGGATGCAGAGGAGATGAAGTTTTCGCATACAGAGAGGCTAAGCGGAGGAGGTGGTTCCGTTTGA

Protein sequence

MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSMTVDSLLSNVYKSNVDSEVSLIDTRNPTHLPTMDSKFNGSSTASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGGGGSV
Homology
BLAST of Sgr028359 vs. NCBI nr
Match: XP_022134121.1 (G-box-binding factor 4-like isoform X3 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS SS    G             +NR+  N    LS S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66

Query: 61  TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
           TVD LL N Y SN      +D++++L+D+ NP+  P           +D+    SS A K
Sbjct: 67  TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126

Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
           +VDD+WREIV+G RKELK+EV +E+ITLEDFL  K   V  E++K   TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168

BLAST of Sgr028359 vs. NCBI nr
Match: XP_022134119.1 (G-box-binding factor 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS SS    G             +NR+  N    LS S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66

Query: 61  TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
           TVD LL N Y SN      +D++++L+D+ NP+  P           +D+    SS A K
Sbjct: 67  TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126

Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
           +VDD+WREIV+G RKELK+EV +E+ITLEDFL  K   V  E++K   TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168

BLAST of Sgr028359 vs. NCBI nr
Match: XP_022134120.1 (G-box-binding factor 4-like isoform X2 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS SS    G             +NR+  N    LS S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66

Query: 61  TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
           TVD LL N Y SN      +D++++L+D+ NP+  P           +D+    SS A K
Sbjct: 67  TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126

Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
           +VDD+WREIV+G RKELK+EV +E+ITLEDFL  K   V  E++K   TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168

BLAST of Sgr028359 vs. NCBI nr
Match: XP_023550818.1 (G-box-binding factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 97.8 bits (242), Expect = 9.0e-17
Identity = 77/184 (41.85%), Postives = 107/184 (58.15%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS +S  +S  +++      ++ N+   RN+    S S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSASLLESQFLSNH-----LRNNDIPTRNR----SHSRSSM 66

Query: 61  TVDSLLSNVYKSN-------VDSEVSLIDTRNPTHLP-----------------TMDSKF 120
           TVD LL N Y SN       +D++++L+D+ NP+ LP                  +DS  
Sbjct: 67  TVDGLLGNGYDSNPTESSILLDAQITLVDSHNPSSLPMNTTTTTTTTTTTNSSAVIDSNH 126

Query: 121 NGSS-TASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTER 160
           N SS  A K+VDD+WREIV+G RKELK+EV +E ITLED+L  +   +  E++K   TER
Sbjct: 127 NTSSGAAPKTVDDVWREIVSGERKELKEEVADEFITLEDYL-LRTGVMPVEDVKLPQTER 180

BLAST of Sgr028359 vs. NCBI nr
Match: XP_022992992.1 (G-box-binding factor 4-like [Cucurbita maxima])

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-16
Identity = 76/184 (41.30%), Postives = 106/184 (57.61%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS +S   S  +++      ++ N+   RN+    S S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSASLLGSQFLSNH-----LRNNDIPTRNR----SHSRSSM 66

Query: 61  TVDSLLSNVYKSN-------VDSEVSLIDTRNPTHLP-----------------TMDSKF 120
           TVD LL N Y SN       +D++++L+D+ NP+ LP                  +DS  
Sbjct: 67  TVDGLLGNGYDSNPTESSILLDAQITLVDSHNPSSLPMNTTTTTTTTTTTNSSAVIDSNH 126

Query: 121 NGSS-TASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTER 160
           N SS  A K+VDD+WREIV+G RK+LK+EV +E ITLED+L  +   +  E++K   TER
Sbjct: 127 NTSSGAAPKTVDDVWREIVSGERKDLKEEVADEFITLEDYL-LRTGVMPVEDVKLPQTER 180

BLAST of Sgr028359 vs. ExPASy TrEMBL
Match: A0A6J1BX24 (G-box-binding factor 4-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006469 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS SS    G             +NR+  N    LS S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66

Query: 61  TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
           TVD LL N Y SN      +D++++L+D+ NP+  P           +D+    SS A K
Sbjct: 67  TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126

Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
           +VDD+WREIV+G RKELK+EV +E+ITLEDFL  K   V  E++K   TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168

BLAST of Sgr028359 vs. ExPASy TrEMBL
Match: A0A6J1BX70 (G-box-binding factor 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006469 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS SS    G             +NR+  N    LS S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66

Query: 61  TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
           TVD LL N Y SN      +D++++L+D+ NP+  P           +D+    SS A K
Sbjct: 67  TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126

Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
           +VDD+WREIV+G RKELK+EV +E+ITLEDFL  K   V  E++K   TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168

BLAST of Sgr028359 vs. ExPASy TrEMBL
Match: A0A6J1BXX0 (G-box-binding factor 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006469 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 79/175 (45.14%), Postives = 101/175 (57.71%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS SS    G             +NR+  N    LS S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSSSSLLKGQFL----------SNRARNNDRGTLSLS--SM 66

Query: 61  TVDSLLSNVYKSN------VDSEVSLIDTRNPTHLP----------TMDSKFNGSSTASK 120
           TVD LL N Y SN      +D++++L+D+ NP+  P           +D+    SS A K
Sbjct: 67  TVDGLLRNGYDSNPTESILLDAQITLVDSPNPSSFPMNATATNSSAVIDTNHTASSAAPK 126

Query: 121 SVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
           +VDD+WREIV+G RKELK+EV +E+ITLEDFL  K   V  E++K   TERLSGG
Sbjct: 127 TVDDVWREIVSGERKELKEEVADELITLEDFL-VKTGAVPVEDVKLPQTERLSGG 168

BLAST of Sgr028359 vs. ExPASy TrEMBL
Match: A0A6J1JRH8 (G-box-binding factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489152 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-16
Identity = 76/184 (41.30%), Postives = 106/184 (57.61%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           +A  NSR+S LS  SSSSSS +S   S  +++      ++ N+   RN+    S S  SM
Sbjct: 7   LASSNSRNSDLSRGSSSSSSSASLLGSQFLSNH-----LRNNDIPTRNR----SHSRSSM 66

Query: 61  TVDSLLSNVYKSN-------VDSEVSLIDTRNPTHLP-----------------TMDSKF 120
           TVD LL N Y SN       +D++++L+D+ NP+ LP                  +DS  
Sbjct: 67  TVDGLLGNGYDSNPTESSILLDAQITLVDSHNPSSLPMNTTTTTTTTTTTNSSAVIDSNH 126

Query: 121 NGSS-TASKSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTER 160
           N SS  A K+VDD+WREIV+G RK+LK+EV +E ITLED+L  +   +  E++K   TER
Sbjct: 127 NTSSGAAPKTVDDVWREIVSGERKDLKEEVADEFITLEDYL-LRTGVMPVEDVKLPQTER 180

BLAST of Sgr028359 vs. ExPASy TrEMBL
Match: A0A6J1HH29 (G-box-binding factor 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463986 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.7e-16
Identity = 73/172 (42.44%), Postives = 102/172 (59.30%), Query Frame = 0

Query: 2   APLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSMT 61
           A   SR+S LS  SSSSSS      S S+ + +  +   +NN +  N+ +N S S  SM 
Sbjct: 8   ASSGSRNSDLSRGSSSSSS------SASLLNPQFLSNSSRNNDN--NRTRNRSHSLSSMN 67

Query: 62  VDSLLSNVYKSN------VDSEVSLIDTRNPTHLP--------TMDSKFNGSSTASKSVD 121
           +D L+ + Y SN      +D++++L+D+  P+  P         +DS  N SS A K+VD
Sbjct: 68  LDGLVRDGYDSNPTESILLDAQITLVDSPIPSTFPMNTTNSSAVIDSYHNTSSGAPKTVD 127

Query: 122 DLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQEVDAEEMKFSHTERLSGG 160
           D+WREIV+G RKELK+EV +E+ITLEDFL  K      E++K   TERLSGG
Sbjct: 128 DVWREIVSGERKELKEEVTDELITLEDFL-VKTGAAPVEDVKLPQTERLSGG 170

BLAST of Sgr028359 vs. TAIR 10
Match: AT5G44080.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 0

Query: 1   MAPLNSRDSQLSPPSSSSSSFSSYTKSGSITDEETKTAIQKNNRSCRNKAQNLSRSSGSM 60
           M   NSR+S LS   SS+S+ SS  +      ++ +  +       RN       SS SM
Sbjct: 7   MRSSNSRNSDLSRRISSASTSSSSIR----PQQQFRRDLTSVGYGGRNDG---LYSSNSM 66

Query: 61  TVDSLLSNVYKSN---------VDSEVSLID-TRNPTHLPT---MDSKFNGSST----AS 120
           TV+ +L + + S+         +D+ ++L+D +  P  + T    D   +G  T      
Sbjct: 67  TVEGILHDTFASDPPAPTESSLLDASINLMDASPAPMEITTTTASDVVDHGGGTETTRGG 126

Query: 121 KSVDDLWREIVAGNRKELKDEVLEEMITLEDFLQAKAQE 143
           KSVD++WRE+V+G  K +K+E  EE++TLEDFL   A E
Sbjct: 127 KSVDEIWREMVSGEGKGMKEETSEEIMTLEDFLAKAAVE 158

BLAST of Sgr028359 vs. TAIR 10
Match: AT1G03970.1 (G-box binding factor 4 )

HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0

Query: 104 KSVDDLWREIVAGNRKE--LKDEVLEEMITLEDFL-QAKAQEVDAEEMKFS-HTERLSGG 161
           KSVDD+W+EIV+G +K   +K+E  E+++TLEDFL +A+  E  ++E+     TERL+  
Sbjct: 85  KSVDDVWKEIVSGEQKTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNND 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022134121.12.1e-1845.14G-box-binding factor 4-like isoform X3 [Momordica charantia][more]
XP_022134119.12.1e-1845.14G-box-binding factor 4-like isoform X1 [Momordica charantia][more]
XP_022134120.12.1e-1845.14G-box-binding factor 4-like isoform X2 [Momordica charantia][more]
XP_023550818.19.0e-1741.85G-box-binding factor 4-like [Cucurbita pepo subsp. pepo][more]
XP_022992992.14.5e-1641.30G-box-binding factor 4-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BX241.0e-1845.14G-box-binding factor 4-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1BX701.0e-1845.14G-box-binding factor 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1BXX01.0e-1845.14G-box-binding factor 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1JRH82.2e-1641.30G-box-binding factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489152 PE=4 SV=... [more]
A0A6J1HH293.7e-1642.44G-box-binding factor 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11146... [more]
Match NameE-valueIdentityDescription
AT5G44080.12.9e-0532.70Basic-leucine zipper (bZIP) transcription factor family protein [more]
AT1G03970.11.9e-0445.90G-box binding factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availablePANTHERPTHR22952:SF184BASIC LEUCINE ZIPPER TRANSCRIPTION FACTORcoord: 4..159
IPR043452Plant bZIP transcription factorsPANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 4..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr028359.1Sgr028359.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity