Sgr028357 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028357
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Ty3-gypsy retrotransposon protein
Location	tig00153057: 2232515 .. 2236362 (+)
RNA-Seq Expression	Sgr028357
Synteny	Sgr028357

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCCAAAGATGGAATGGTTTGCCATTGCCGTGCTATGAAGGCACTTAGATTGAAGGTCCCCCTTTTAGCCCTTTATGGCCTCATTTCAATCCTCAGCCTTTATGGCCTCATTTCAATCCTCAATGCGTTGGGCCAAATCTATTTTAGGGCCCAGTTCCTAAAGTTGCAGTAATCTCACTCCTGCATATATCTTTGTTTTCAAGTCATCATCTAACTCACTCTCCACTCATTCCAATAGTCCTTTTAAGGGTGCCACCAACACTTCAAACAATGGTTGTTACTCCTTCACAATAGAAGCTAGATGGTGATTCATAAATTTCTCACAAAGGGTCCCCTCCTATGTAGGTCTAAACCGCCTCAACAGTTGATGCCGCAGCCTTGCCCAACTCCAAAAAGGTCGTCATCCCTCTTCCCATTAGAACCTAGATAGCGCAAGCATATCACGAGCGCATCAATCTTTTTTTTTTAAACGGAAACAAACTTTTCATTAAGAAATTGAAACGTTACAAAGCTTCATCTGAATATGATGAAACATGAACAACACTCAGCACTTAAACCTTACCAAAGCCAAAATACACAACACACACCATTCCCCACTGAAAAAGAAACAAGCCCAACTAAAAGGTGAAAAGTAACTTAAACAACACAACCTAACTTGTTTTACTCATGATAGCTAAGAAATGAATGCCAACAAACATATATATGAGAAAAAGAAAAGCTTCTAAAAACTTTGAAATCGCCACTGCATCAATTATCTCTTCTTTTCCCAGTTTATTTACTTCAAAGTATCACTCAACCGCAACAACTTATCATCCTAGTTTTCCCTTTAAAAATTGGCATTCCAACCTCCTTATCGATCTACTTGCATTCATCCCATTGCTAGATTCACTCACCCTTATGATACAACTTCCACCATGGCCTTTCCTTTATCTTCTTTTTCTCTCTTTTATGTGATCTTCATCCTTCACTGTGGAAGGTTAGAATCCCAAGAAGGTGAAATTCTCTACTTGGTAGGTGCTTCATAGGAGGATTAACACCATTGACCGTGTGCAAAGATCTACCTTTGGGCTATTGGAGCCATATTGGTGCATGTATGTAAATGTGCTCGAAGGATTTGGGCCATGTCATATGGAAATGCCATTTCACAAACTCATCATGGTATAGTTTTTGGGAGTCCTTTGACATTTTTCTAGTGCGTAATAGATCTTGTCATTTGATGATAGATGACGTTTTGTTCCATCCACTATTTCTAAACAAGAGAAGGATTCTTTGGCATGCAACTTCTTATGCTACTTTGTGGAGCATCTAACTTGAGAGAAATAAGAGAATTTTTAGAGGGCTCAAAAGCTCGGGAGAGGTGTGGGCTATGACTAGTTTTCACATGCCCCCTTTGGCCCTTTTCTAAAAGTCTCCTTTGTATAGACTGCTTTGGTAGGGTGCTTTTGCTTTCTTTTTTGCCATGCCCCTTTGTATTCTTTCATTGCCTCAATGAAAACTTGGTTTTTCATAAAAAAGACGCACCTCCCCCAATCTCATCATAACACTTTCCATATTCTTCTCCATGCTTAGTTGCATTCATCCTTCATCTGGAACAACCCAACTTCCATGGCATTTTACACTCTCGTAATCTTCTCTTGCACGTAAGAGAGTTCTTTGTCCACTACTTCAATTCAATTTTCCATTTGCTTATTCATTACCATTCCCAAATAAAGTCACTGCTCTGGTACAACTGAGGAGAATTGAAAGCTCTCCTATCTCTCCCAAAATGACTACTAGATACTTCCTACCTTCTGCCCATGCCAAACACATTACTTATACTACTAACATTGTTACTTAGTTACACGGGTCCCATCCCTTCCACTCGTCTAGCCACCTGACTCACCCCGATACGTACTATTTCCCTTTCTACCCTTTCCCATATGTGAATCTTTTTTTAAGAAACAAAACTTTCCATTGATATGAAAAGTTACAATAATAGAACTCCTGAATCCCATACAAAACTTTCTTACTATTAATAATTAGATAAACTAACCAATAACCAACATAGCCCTCCTAAAAACAAACCCTTCATCATGTTGAAATATAAAGGAAAGAATGTTGAAATACAAAAGAAAGAATTCCAGCTAAAATAAATTTCGAAGGGAGAATTATTTTGAAAATATTTGGAATGTAAAGAATGGCCTATCACTCCCCACCCGTCCCCCCACCCGCAGTTTTACCAAGCGAAACATTATCTAGACAACAAATTTCAGAAAGAGAGCATCAATAAGCGTGTTAAAAGGCCTCGTGCTTCGTCCATGCAAGTTTCCCATGGATTTTTCACAAGACCATCTCACTGCATTAAAAACCCCTCCATGATCCAAAGATAATAGCAAAAACCCAGGCCGAGATATCTTGAGTATCCCTATAAAAAAATCAAATATACAAAATATGGACCATAAGCTCCGAATAACAAGTAGAAGTTCTTGAAGTATCCTTTCCAAATATTTCTGCAACAATTCACTTTCTGAAATTTATGCTTGTTGGAGTTCTTTTTTATGTAATCCAGGTTGATAGTTTGGTTCTGGGGTTGGTTGCTGTTTTGAGTGTTTTCTGAGTTAGGTTTATTCCATATTTGTTGCTGAGATAGTGTTAGACCTCCTATTTTGAAGGTTTATTCGAGGAAGGGTAAAAAGGGAAGTGCGGCAGTTTAATGTAGTTTTACTAGTTATCTTTTACGTGTTTTATGTGTAAATAGGGAGTTGTAACTCCTAGTTCAGTTATTTGATGTTTTCCTCTATTTAGAAGTAGTTTGCAGAATAGTAGGGGTGGTTTTTTGGTTTTGTGAATGCTTGGGCTAGTGTGGACAGATCAATGACCCTCTCGAATTGGTCATTAGGTGACTAGTTTGTATCTTTTCTTGTTACTGGAATTTTATGAAGTAGATACCTATCAAATTGGTATCAAAGCAGCTTCAAACTGGGAAAAGGAAGGAAAATCATGACTCAAAAGAAGGTGGAATAACGATTTGAAGCCGTGGAAAAGGAAATCAGTGATATGAGCGGAGTATTACAACGCTTACCGGGAATTGAACGAGCAATTGAAGGACTTTCGCAAGAGATTGCCTAGATTTTACTTACTCTTAAAGAGAATGCTGTCCAGAAACAAGTTTCTCATTCTGAAAATGATGGTTTGCGAAGCACCGACAGAAAAGTCGACGTTGGTGAGTCTTCTGGAAATCTTTTCGAAGGGGAGTGTCAGGGTAAGAGTATGGGAGAGATTGCTGAGAAGCGCTATAAAAAAAATGAGGAAATGCCTATTTTCGATGGTAATGATCCAAAACCTTGGATATTTTGCGCCGAACATTATTTCGAAATTCATCAACTCACTGCTGCAAAAAAATTATCAGTGTCAGTAATAAGTTTTGAGGGTGATGCTCTAAAATGGTACCAGTGGGCTGAAAATCGTAAACATTTTCAAAATTGGGAAGATTTACGCAAGAGATTACTTACTCATTTTCGACCTTTAAAGGAAGGGGATCCGTATGAACAGTTCTTAGCAATCAAACAGGACAGCACGGTACCAGATTATTCACGAAGGTTTGAAACGATGGCAGGACTACTACCCGACCTGTCTGAAAGCATAGTAAAGAGTACTTTTGTTAAAGGGCTTCTTTCAAAAATTCGCGCTGAAATCAGATGCATGAAACCCGTCACATTGGAAGAGATTATGGAGAAGGCCCAACTAATTGAAGACAAAGAGGCGATAGATTCCCCAGCCCACGAGGCAACTTCGAATCGGGCCTATAAGAAGATGATTTTTGTCGGTCCAGTGAGTAAAACCCATGAGAGTGCCTTGACCTGA

mRNA sequence

ATGGAGCCCAAAGATGGAATGGTTTGCCATTGCCGTGCTATGAAGGCACTTAGATTGAAGAAACAAGTTTCTCATTCTGAAAATGATGGTTTGCGAAGCACCGACAGAAAAGTCGACGTTGGTGAGTCTTCTGGAAATCTTTTCGAAGGGGAGTGTCAGGGTAAGAGTATGGGAGAGATTGCTGAGAAGCGCTATAAAAAAAATGAGGAAATGCCTATTTTCGATGGTAATGATCCAAAACCTTGGATATTTTGCGCCGAACATTATTTCGAAATTCATCAACTCACTGCTGCAAAAAAATTATCAGTGTCAGTAATAAGTTTTGAGGGTGATGCTCTAAAATGGTACCAGTGGGCTGAAAATCGTAAACATTTTCAAAATTGGGAAGATTTACGCAAGAGATTACTTACTCATTTTCGACCTTTAAAGGAAGGGGATCCGTATGAACAGTTCTTAGCAATCAAACAGGACAGCACGGTACCAGATTATTCACGAAGGTTTGAAACGATGGCAGGACTACTACCCGACCTGTCTGAAAGCATAGTAAAGAGTACTTTTGTTAAAGGGCTTCTTTCAAAAATTCGCGCTGAAATCAGATGCATGAAACCCGTCACATTGGAAGAGATTATGGAGAAGGCCCAACTAATTGAAGACAAAGAGGCGATAGATTCCCCAGCCCACGAGGCAACTTCGAATCGGGCCTATAAGAAGATGATTTTTGTCGGTCCAGTGAGTAAAACCCATGAGAGTGCCTTGACCTGA

Coding sequence (CDS)

ATGGAGCCCAAAGATGGAATGGTTTGCCATTGCCGTGCTATGAAGGCACTTAGATTGAAGAAACAAGTTTCTCATTCTGAAAATGATGGTTTGCGAAGCACCGACAGAAAAGTCGACGTTGGTGAGTCTTCTGGAAATCTTTTCGAAGGGGAGTGTCAGGGTAAGAGTATGGGAGAGATTGCTGAGAAGCGCTATAAAAAAAATGAGGAAATGCCTATTTTCGATGGTAATGATCCAAAACCTTGGATATTTTGCGCCGAACATTATTTCGAAATTCATCAACTCACTGCTGCAAAAAAATTATCAGTGTCAGTAATAAGTTTTGAGGGTGATGCTCTAAAATGGTACCAGTGGGCTGAAAATCGTAAACATTTTCAAAATTGGGAAGATTTACGCAAGAGATTACTTACTCATTTTCGACCTTTAAAGGAAGGGGATCCGTATGAACAGTTCTTAGCAATCAAACAGGACAGCACGGTACCAGATTATTCACGAAGGTTTGAAACGATGGCAGGACTACTACCCGACCTGTCTGAAAGCATAGTAAAGAGTACTTTTGTTAAAGGGCTTCTTTCAAAAATTCGCGCTGAAATCAGATGCATGAAACCCGTCACATTGGAAGAGATTATGGAGAAGGCCCAACTAATTGAAGACAAAGAGGCGATAGATTCCCCAGCCCACGAGGCAACTTCGAATCGGGCCTATAAGAAGATGATTTTTGTCGGTCCAGTGAGTAAAACCCATGAGAGTGCCTTGACCTGA

Protein sequence

MEPKDGMVCHCRAMKALRLKKQVSHSENDGLRSTDRKVDVGESSGNLFEGECQGKSMGEIAEKRYKKNEEMPIFDGNDPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKRLLTHFRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKIRAEIRCMKPVTLEEIMEKAQLIEDKEAIDSPAHEATSNRAYKKMIFVGPVSKTHESALT

Homology

[Close]

BLAST of Sgr028357 vs. NCBI nr
Match: XP_022897442.1 (uncharacterized protein LOC111411108 [Olea europaea var. sylvestris])

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-35
Identity = 82/213 (38.50%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 12  RAMKALRLKKQVSHSENDGLRSTDRKVD--VGESSGNLFEGECQGKSMGEIAEKRYKKNE 71
           R  K +  +K  + S   GL  +    +  VG S+G+ + GE + + +            
Sbjct: 104 RKEKGITSEKSPTLSAESGLTQSRPSSNQCVGGSAGSEWRGEPRIRRL------------ 163

Query: 72  EMPIFDGNDPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWE 131
           EMP+F+GNDP  W+F  E YF +++L+  +KL  + + F+G+AL W+QW E R+  + WE
Sbjct: 164 EMPVFEGNDPDGWVFRVERYFSVNRLSEEEKLEAAAVCFDGEALAWFQWEERRRPVKAWE 223

Query: 132 DLRKRLLTHFRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKG 191
           DL+  LL  FRP +EG    QFL+++Q +TV +Y RRFET+A  L  +SE +++ +F+ G
Sbjct: 224 DLKAHLLRRFRPSQEGSLCAQFLSLQQTTTVREYRRRFETLASPLLGISEEVMECSFLNG 283

Query: 192 LLSKIRAEIRCMKPVTLEEIMEKAQLIEDKEAI 223
           L ++IRAE++ ++P+ LE+IME AQ++ED+  I
Sbjct: 284 LRAEIRAEVQLLRPLGLEQIMEVAQMVEDRNLI 304

[Close]

BLAST of Sgr028357 vs. NCBI nr
Match: EXB38291.1 (hypothetical protein L484_013924 [Morus notabilis])

HSP 1 Score: 158.3 bits (399), Expect = 8.7e-35
Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 58   GEIAEKRYKKNEEMPIFDGNDPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQ 117
            G I  +   +  EMP+FDG +P  W   AE YF ++++T  +KL V+V+S EG+AL W+Q
Sbjct: 856  GGIRAELCTRRVEMPVFDGENPDGWSIRAERYFAMNKMTEREKLDVAVVSLEGEALAWFQ 915

Query: 118  WAENRKHFQNWEDLRKRLLTHFRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDL 177
            W + R   ++W  L+  LL  FRP++EG   E+FL+++Q++TV DY R+FE +A  L +L
Sbjct: 916  WEDGRSPIRSWMVLKLMLLERFRPMQEGSLCEKFLSLRQETTVRDYRRQFEILAAPLTEL 975

Query: 178  SESIVKSTFVKGLLSKIRAEIRCMKPVTLEEIMEKAQLIEDK 220
            SE +++STFVKGL  +IRAEIR MKP  L  IME AQ +E++
Sbjct: 976  SEQVLESTFVKGLKPEIRAEIRLMKPERLGRIMEVAQRVEER 1017

[Close]

BLAST of Sgr028357 vs. NCBI nr
Match: KAA0037917.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 2.5e-34
Identity = 83/199 (41.71%), Postives = 127/199 (63.82%), Query Frame = 0


Query: 26  SENDGLRSTDRKVDVGESSGNLFEGECQGKSMGEI----AEKRYK-KNEEMPIFDGNDPK 85
           SE  G+ +  RK  V    G   EGE +G++   +     +KR K K  EMP+F+G DP+
Sbjct: 55  SELTGVSTGKRK--VRNEEGPQEEGE-EGETSLSVETGGGQKRIKFKKLEMPVFNGEDPE 114

Query: 86  PWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKRLLTHFR 145
            W + AEHYF++H L   +KL ++V+S EG  L W++WAENRK F++W +L++R+   FR
Sbjct: 115 GWFYRAEHYFQMHLLNEREKLEIAVVSLEGRGLNWFRWAENRKRFRSWRELKERMYNRFR 174

Query: 146 PLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKIRAEIRC 205
               G    +FLAIKQ+ TV +Y ++FE ++  LP+++E +++ TF  GL  +IR E+  
Sbjct: 175 CRDFGTACARFLAIKQEGTVSEYLQKFEELSAPLPEMAEEVLEGTFTNGLDPRIRKEVFS 234

Query: 206 MKPVTLEEIMEKAQLIEDK 220
           M+ V LE++ME AQL E+K
Sbjct: 235 MRAVGLEDLMEAAQLAEEK 250

[Close]

BLAST of Sgr028357 vs. NCBI nr
Match: TYK03081.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-34
Identity = 89/238 (37.39%), Postives = 136/238 (57.14%), Query Frame = 0


Query: 26   SENDGLRSTDRK-------VDVGESSGNLFEGECQGKSMGEIAEKRYK-KNEEMPIFDGN 85
            SE  G+ +  RK       ++ GE       GE  G       ++R K K  EMP+F+  
Sbjct: 810  SELTGISTRKRKERNEAGVLEEGEEGETSLSGEAGG------GQERIKFKKLEMPVFNSE 869

Query: 86   DPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKRLLT 145
            DP+ W + AEHYF++H L+  +KL ++V+S EG  L W++WAENRK F++W +L++R+  
Sbjct: 870  DPEGWFYRAEHYFQMHLLSEREKLKIAVVSLEGRGLSWFRWAENRKRFRSWRELKERMYN 929

Query: 146  HFRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKIRAE 205
             FR    G    +FLAIKQ+ TV +Y ++FE ++  LP+++E +++ TF  GL  +IR E
Sbjct: 930  RFRCRDFGTACARFLAIKQEGTVGEYLQKFEELSASLPEMAEEVLEGTFTNGLDPRIRKE 989

Query: 206  IRCMKPVTLEEIMEKAQLIEDKE--AIDSPAHEATSNRAYKKMIFVGPVSKTHESALT 254
            +  M+ V LE++ME AQL E+K   +   P     S    K  +  GP  KT+ S  T
Sbjct: 990  VFSMRVVGLEDLMEAAQLAEEKAEWSKGGPYPSPLSKEMMKTNL--GPSPKTNGSPTT 1039

[Close]

BLAST of Sgr028357 vs. NCBI nr
Match: KAA0038377.1 (gypsy/ty3 element polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 4.3e-34
Identity = 81/209 (38.76%), Postives = 127/209 (60.77%), Query Frame = 0


Query: 20  KKQVSHSENDGLRSTDRKVDVGESSGNLFEGECQGKSMGEIAEKRYK-KNEEMPIFDGND 79
           ++Q   SE  G+ +  RK+   +      EGE          + R K K  EMP+F+G D
Sbjct: 49  QRQPGSSELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGED 108

Query: 80  PKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKRLLTH 139
           P  WI+ AEHYF++H L   +KL ++++S EG  L W++WAENRK F++W++L++RL T 
Sbjct: 109 PDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTR 168

Query: 140 FRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKIRAEI 199
           FR  + G    +FLAIKQ+ +V +Y +RFE ++  LP+++E ++   F  GL   IR E+
Sbjct: 169 FRNREYGTGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEV 228

Query: 200 RCMKPVTLEEIMEKAQLIEDKEAIDSPAH 228
             M+ V LE++M+ A+L E+K  I   +H
Sbjct: 229 FAMRAVGLEDMMDAARLAEEKLEIARASH 257

[Close]

BLAST of Sgr028357 vs. ExPASy TrEMBL
Match: W9QTX5 (Mediator of RNA polymerase II transcription subunit 25 OS=Morus notabilis OX=981085 GN=L484_013924 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.2e-35
Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 58   GEIAEKRYKKNEEMPIFDGNDPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQ 117
            G I  +   +  EMP+FDG +P  W   AE YF ++++T  +KL V+V+S EG+AL W+Q
Sbjct: 856  GGIRAELCTRRVEMPVFDGENPDGWSIRAERYFAMNKMTEREKLDVAVVSLEGEALAWFQ 915

Query: 118  WAENRKHFQNWEDLRKRLLTHFRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDL 177
            W + R   ++W  L+  LL  FRP++EG   E+FL+++Q++TV DY R+FE +A  L +L
Sbjct: 916  WEDGRSPIRSWMVLKLMLLERFRPMQEGSLCEKFLSLRQETTVRDYRRQFEILAAPLTEL 975

Query: 178  SESIVKSTFVKGLLSKIRAEIRCMKPVTLEEIMEKAQLIEDK 220
            SE +++STFVKGL  +IRAEIR MKP  L  IME AQ +E++
Sbjct: 976  SEQVLESTFVKGLKPEIRAEIRLMKPERLGRIMEVAQRVEER 1017

[Close]

BLAST of Sgr028357 vs. ExPASy TrEMBL
Match: A0A5A7T8L1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00950 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 83/199 (41.71%), Postives = 127/199 (63.82%), Query Frame = 0


Query: 26  SENDGLRSTDRKVDVGESSGNLFEGECQGKSMGEI----AEKRYK-KNEEMPIFDGNDPK 85
           SE  G+ +  RK  V    G   EGE +G++   +     +KR K K  EMP+F+G DP+
Sbjct: 55  SELTGVSTGKRK--VRNEEGPQEEGE-EGETSLSVETGGGQKRIKFKKLEMPVFNGEDPE 114

Query: 86  PWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKRLLTHFR 145
            W + AEHYF++H L   +KL ++V+S EG  L W++WAENRK F++W +L++R+   FR
Sbjct: 115 GWFYRAEHYFQMHLLNEREKLEIAVVSLEGRGLNWFRWAENRKRFRSWRELKERMYNRFR 174

Query: 146 PLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKIRAEIRC 205
               G    +FLAIKQ+ TV +Y ++FE ++  LP+++E +++ TF  GL  +IR E+  
Sbjct: 175 CRDFGTACARFLAIKQEGTVSEYLQKFEELSAPLPEMAEEVLEGTFTNGLDPRIRKEVFS 234

Query: 206 MKPVTLEEIMEKAQLIEDK 220
           M+ V LE++ME AQL E+K
Sbjct: 235 MRAVGLEDLMEAAQLAEEK 250

[Close]

BLAST of Sgr028357 vs. ExPASy TrEMBL
Match: A0A5D3BTN5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001880 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 89/238 (37.39%), Postives = 136/238 (57.14%), Query Frame = 0


Query: 26   SENDGLRSTDRK-------VDVGESSGNLFEGECQGKSMGEIAEKRYK-KNEEMPIFDGN 85
            SE  G+ +  RK       ++ GE       GE  G       ++R K K  EMP+F+  
Sbjct: 810  SELTGISTRKRKERNEAGVLEEGEEGETSLSGEAGG------GQERIKFKKLEMPVFNSE 869

Query: 86   DPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKRLLT 145
            DP+ W + AEHYF++H L+  +KL ++V+S EG  L W++WAENRK F++W +L++R+  
Sbjct: 870  DPEGWFYRAEHYFQMHLLSEREKLKIAVVSLEGRGLSWFRWAENRKRFRSWRELKERMYN 929

Query: 146  HFRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKIRAE 205
             FR    G    +FLAIKQ+ TV +Y ++FE ++  LP+++E +++ TF  GL  +IR E
Sbjct: 930  RFRCRDFGTACARFLAIKQEGTVGEYLQKFEELSASLPEMAEEVLEGTFTNGLDPRIRKE 989

Query: 206  IRCMKPVTLEEIMEKAQLIEDKE--AIDSPAHEATSNRAYKKMIFVGPVSKTHESALT 254
            +  M+ V LE++ME AQL E+K   +   P     S    K  +  GP  KT+ S  T
Sbjct: 990  VFSMRVVGLEDLMEAAQLAEEKAEWSKGGPYPSPLSKEMMKTNL--GPSPKTNGSPTT 1039

[Close]

BLAST of Sgr028357 vs. ExPASy TrEMBL
Match: A0A5D3BD16 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001350 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-34
Identity = 81/209 (38.76%), Postives = 127/209 (60.77%), Query Frame = 0


Query: 20  KKQVSHSENDGLRSTDRKVDVGESSGNLFEGECQGKSMGEIAEKRYK-KNEEMPIFDGND 79
           ++Q   SE  G+ +  RK+   +      EGE          + R K K  EMP+F+G D
Sbjct: 49  QRQPGSSELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGED 108

Query: 80  PKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKRLLTH 139
           P  WI+ AEHYF++H L   +KL ++++S EG  L W++WAENRK F++W++L++RL T 
Sbjct: 109 PDGWIYRAEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTR 168

Query: 140 FRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKIRAEI 199
           FR  + G    +FLAIKQ+ +V +Y +RFE ++  LP+++E ++   F  GL   IR E+
Sbjct: 169 FRNREYGTGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEV 228

Query: 200 RCMKPVTLEEIMEKAQLIEDKEAIDSPAH 228
             M+ V LE++M+ A+L E+K  I   +H
Sbjct: 229 FAMRAVGLEDMMDAARLAEEKLEIARASH 257

[Close]

BLAST of Sgr028357 vs. ExPASy TrEMBL
Match: A0A5D3C5T9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002110 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-34
Identity = 82/205 (40.00%), Postives = 129/205 (62.93%), Query Frame = 0


Query: 20  KKQVSHSENDGLRSTDRKVDVGESSGNLFEGECQGKSMGEI----AEKRYK-KNEEMPIF 79
           ++Q   SE  G+ +  RK  V    G   EGE +G++   +     ++R K K  EMP+F
Sbjct: 49  QRQTRESELTGISTEKRK--VRNEEGTQEEGE-EGETSLSVETGGGQERIKFKKLEMPVF 108

Query: 80  DGNDPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWEDLRKR 139
           +G DP+ W + AEHYF++H L   +KL ++V+S EG  L W++WAENRK F++W +L++R
Sbjct: 109 NGEDPEGWFYRAEHYFQMHLLNEREKLKIAVVSLEGRGLNWFRWAENRKRFRSWRELKER 168

Query: 140 LLTHFRPLKEGDPYEQFLAIKQDSTVPDYSRRFETMAGLLPDLSESIVKSTFVKGLLSKI 199
           +   FR    G    +FLAI+Q  TV +Y ++FE ++  LP+++E +++ TF  GL  +I
Sbjct: 169 MYNRFRCRDFGTACARFLAIRQVGTVSEYLQKFEELSAPLPEMAEEVLEKTFTNGLDPRI 228

Query: 200 RAEIRCMKPVTLEEIMEKAQLIEDK 220
           R E+  M+ V LE++ME AQL E+K
Sbjct: 229 RKEVFSMRAVGLEDLMEAAQLAEEK 250

[Close]

BLAST of Sgr028357 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-09
Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 70  EMPIFDGNDPKPWIFCAEHYFEIHQLTAAKKLSVSVISFEGDALKWYQWAENRKHFQNWE 129
           EMP+FDG+    W    E +F + +   + KL +  +S EG ALKW+    +   F++W 
Sbjct: 111 EMPVFDGSGVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLREMSTLEFRDWN 170

Query: 130 DLRKRLLTHFRPLK 144
              +RLL  F P+K
Sbjct: 171 SFEQRLLARFDPVK 184

The following BLAST results are available for this feature:

BLAST of Sgr028357 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022897442.1	1.0e-35	38.50	uncharacterized protein LOC111411108 [Olea europaea var. sylvestris]	[more]
EXB38291.1	8.7e-35	46.91	hypothetical protein L484_013924 [Morus notabilis]	[more]
KAA0037917.1	2.5e-34	41.71	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK03081.1	3.3e-34	37.39	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038377.1	4.3e-34	38.76	gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Sgr028357 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr028357 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
W9QTX5	4.2e-35	46.91	Mediator of RNA polymerase II transcription subunit 25 OS=Morus notabilis OX=981...	[more]
A0A5A7T8L1	1.2e-34	41.71	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BTN5	1.6e-34	37.39	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BD16	2.1e-34	38.76	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3C5T9	2.1e-34	40.00	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Sgr028357 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67020.1	3.9e-09	35.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 105..190 e-value: 4.2E-13 score: 49.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..39
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 51..227
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 51..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr028357.1	Sgr028357.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process