Sgr028169 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028169
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Nucleic acid-binding, OB-fold containing protein
Location	tig00153056: 4163976 .. 4165320 (-)
RNA-Seq Expression	Sgr028169
Synteny	Sgr028169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGGGGAAATCACCTACACCGGCAACCCAGGAGGTGCAGCAGAGCAATGGGGCCAGAGCAGGGCTGAGGAAACCAGTCTTCGTACAGGTCGAACAGCTCAAGCCTGGCACCAATGGCCATACACTCACCGTCAAGGTTGTTAGCTCCAACACCGTGTTGCAGAAAGGTCGATCGGTGTCCCAGCACCTCCGCCAGACTCGGATCGCTGAGTGCCTTGTTGGGGACGAAACGGGAACCATTTTATTCACTGCGCGTAATGACCAAGGTATGAATTTTAGAATCTGTTATTACTGTTTGGTTTCCGGGAAAATTCGGGAAGAGGGGAAATGTTTTCTTTTATGTGAATTGGGAAGAAGAATATCAGATATTGTTTGGATAGCAGCTGGGGAGGCGAAATCAATTATTATATAGGCAGGATATTTGAAATATGAACCCCATAGCGATTGAAATTTGACGTTTTCGTGCCCTTACTTAATCTGAGTTTAAAATAGTGAAATAATACGGATCGCGTGCTTATCGCGAGATTGGGAAGAATAATATTAGATATTGTTTCGGAGGATTACCCAGTTCTTGCTGATGCGCTTAAAGAAACTTGAAAGCAGAAATAAGAGGCCTAAAAGGATTGGTGCTTTCCTACTGCTTATTTTTATTATTTATTTTTTTGTGGGGTGGGGTGAGGGGGGGGGGGGGGGGGGAGGTGGGAATTTCAGTATCTGCTGTCTGAACTGCATGGGGACATGCAAAGAAGAAAGTTTCTGCTCTCTTTTGGTTGAATGAAAACTCTTCTTAATGTTGGGTTAAGAAGCTAGGACGATTTAAATCCCTGTGGCTTCTTGCTCTTGAATTGTTATTTAGTCATATGCTTCTACTTGTTTCAAACGGGAGAGTTGTTCTTCATAATAATGCTATGCTAATTGAAGATTTTAGTTGAAACTGAAAGCTAAATGTTAGCTCACTACAAATCCACAGCCCAATCTACTTCTAGTTGGTCTCTGTAAACAATCATGATGATATACATTCTAACCGATCTTTCATGGTTACCATTAAAAATATGTATTTTTGTTCAATGCATACTTAATTTTTCTTTCTTTGTTGCCATAGCATTTAATATCTCCAAAGTTTTAAAATGCATTATTTTGTTTACTCAGTTGATCTAGTAAAACCTGGGACAACTATCATTCTTCGAAACGCAAAGATTGACATGTTCAAGGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGCTCACTGAGCCTGCGAAGTTTGTTGTCAAGGAAGACAACAATCTATCTTTAGTTGAGTATGAACTTGTGAATGTTGCAGAGGAATGA

mRNA sequence

ATGGCGACGGGGAAATCACCTACACCGGCAACCCAGGAGGTGCAGCAGAGCAATGGGGCCAGAGCAGGGCTGAGGAAACCAGTCTTCGTACAGGTCGAACAGCTCAAGCCTGGCACCAATGGCCATACACTCACCGTCAAGGTTGTTAGCTCCAACACCGTGTTGCAGAAAGGTCGATCGGTGTCCCAGCACCTCCGCCAGACTCGGATCGCTGAGTGCCTTGTTGGGGACGAAACGGGAACCATTTTATTCACTGCGCGTAATGACCAAGTTGATCTAGTAAAACCTGGGACAACTATCATTCTTCGAAACGCAAAGATTGACATGTTCAAGGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGCTCACTGAGCCTGCGAAGTTTGTTGTCAAGGAAGACAACAATCTATCTTTAGTTGAGTATGAACTTGTGAATGTTGCAGAGGAATGA

Coding sequence (CDS)

ATGGCGACGGGGAAATCACCTACACCGGCAACCCAGGAGGTGCAGCAGAGCAATGGGGCCAGAGCAGGGCTGAGGAAACCAGTCTTCGTACAGGTCGAACAGCTCAAGCCTGGCACCAATGGCCATACACTCACCGTCAAGGTTGTTAGCTCCAACACCGTGTTGCAGAAAGGTCGATCGGTGTCCCAGCACCTCCGCCAGACTCGGATCGCTGAGTGCCTTGTTGGGGACGAAACGGGAACCATTTTATTCACTGCGCGTAATGACCAAGTTGATCTAGTAAAACCTGGGACAACTATCATTCTTCGAAACGCAAAGATTGACATGTTCAAGGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGCTCACTGAGCCTGCGAAGTTTGTTGTCAAGGAAGACAACAATCTATCTTTAGTTGAGTATGAACTTGTGAATGTTGCAGAGGAATGA

Protein sequence

MATGKSPTPATQEVQQSNGARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE

Homology

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BLAST of Sgr028169 vs. NCBI nr
Match: XP_022139613.1 (uncharacterized protein At4g28440-like [Momordica charantia])

HSP 1 Score: 273.9 bits (699), Expect = 8.6e-70
Identity = 143/154 (92.86%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSNG-ARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+ EVQQSN  AR GLRKPVFV+VEQLKPGTNGHTLTVKVV+SNTVLQKGR
Sbjct: 1   MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTIL TARNDQVDLVKP TTII+RNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIELTEPA FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE 154

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BLAST of Sgr028169 vs. NCBI nr
Match: XP_038899654.1 (uncharacterized protein At4g28440-like [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 142/154 (92.21%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSN-GARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+QE+QQSN  AR GLRKPVFV++EQLKPGTNGHTL VKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQSNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIEL EP  FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Sgr028169 vs. NCBI nr
Match: XP_004146043.1 (uncharacterized protein At4g28440 [Cucumis sativus] >KGN55099.1 hypothetical protein Csa_012716 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 7.3e-69
Identity = 140/154 (90.91%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSNGA-RAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+QE+QQ+N A R GLRKPVFV++EQLKPGTNGHTL VKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAPRPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIEL +P  FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Sgr028169 vs. NCBI nr
Match: XP_008463705.1 (PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo] >KAA0066804.1 Nucleic acid-binding [Cucumis melo var. makuwa] >TYK27951.1 Nucleic acid-binding [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSN-GARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+QE+QQ+N  AR GLRKPVFV++EQLKPGTNGHTL VKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIE+ +P  FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Sgr028169 vs. NCBI nr
Match: XP_023535412.1 (uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.2 bits (648), Expect = 7.1e-64
Identity = 133/153 (86.93%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSNGARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGRS 60
           MAT KSPTPA         +R+GLRKPVFV+VEQLKPGTNGHTL VKVVSSNTVLQKGRS
Sbjct: 1   MATEKSPTPA---------SRSGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRS 60

Query: 61  VSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDK 120
           VSQHLRQTRIAECL+GDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVDK
Sbjct: 61  VSQHLRQTRIAECLIGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVDK 120

Query: 121 WGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           WGRIE+ EP  FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 WGRIEVVEPENFVVKEDNNLSLVEYELVNVAEE 144

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BLAST of Sgr028169 vs. ExPASy Swiss-Prot
Match: O49453 (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.9e-46
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 17  SNGARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR------SVSQHLRQTRI 76
           + G     RKPVFV+VEQLKPGT GHTLTVKV+ +N V+   R      S+S+  + +RI
Sbjct: 10  ATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRI 69

Query: 77  AECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELTEPA 136
            ECL+GDETG ILFTARNDQVDL+KPG T+ILRN++IDMFKG+MRL VDKWGRIE T  A
Sbjct: 70  VECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAA 129

Query: 137 KFVVKEDNNLSLVEYELVNV 151
            F VKEDNNLSLVEYEL+NV
Sbjct: 130 SFTVKEDNNLSLVEYELINV 149

[Close]

BLAST of Sgr028169 vs. ExPASy TrEMBL
Match: A0A6J1CG19 (uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC111010472 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.2e-70
Identity = 143/154 (92.86%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSNG-ARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+ EVQQSN  AR GLRKPVFV+VEQLKPGTNGHTLTVKVV+SNTVLQKGR
Sbjct: 1   MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTIL TARNDQVDLVKP TTII+RNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIELTEPA FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Sgr028169 vs. ExPASy TrEMBL
Match: A0A0A0L242 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629450 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 140/154 (90.91%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSNGA-RAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+QE+QQ+N A R GLRKPVFV++EQLKPGTNGHTL VKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAPRPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIEL +P  FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Sgr028169 vs. ExPASy TrEMBL
Match: A0A5D3DWE0 (Nucleic acid-binding OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001550 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.0e-69
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSN-GARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+QE+QQ+N  AR GLRKPVFV++EQLKPGTNGHTL VKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIE+ +P  FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Sgr028169 vs. ExPASy TrEMBL
Match: A0A1S3CKC4 (uncharacterized protein At4g28440-like OS=Cucumis melo OX=3656 GN=LOC103501787 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.0e-69
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSN-GARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR 60
           MATGKSPTPA+QE+QQ+N  AR GLRKPVFV++EQLKPGTNGHTL VKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           KWGRIE+ +P  FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Sgr028169 vs. ExPASy TrEMBL
Match: A0A6J1FBC1 (uncharacterized protein At4g28440-like OS=Cucurbita moschata OX=3662 GN=LOC111442557 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.5e-64
Identity = 132/153 (86.27%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MATGKSPTPATQEVQQSNGARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGRS 60
           MAT KSPTPA         +R+GLRKPVFV+VEQLKPGTNGHTL VKVVSSNTVLQKGRS
Sbjct: 1   MATEKSPTPA---------SRSGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRS 60

Query: 61  VSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDK 120
           VSQHLRQTRIAECL+GDETGTILFTARNDQVD VKPGTTIILRNAKIDMFKGSMRLAVDK
Sbjct: 61  VSQHLRQTRIAECLIGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVDK 120

Query: 121 WGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           WGRIE+ EP  FVVKEDNNLSL+EYELVNVAEE
Sbjct: 121 WGRIEVVEPENFVVKEDNNLSLIEYELVNVAEE 144

[Close]

BLAST of Sgr028169 vs. TAIR 10
Match: AT2G33845.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-51
Identity = 107/156 (68.59%), Postives = 120/156 (76.92%), Query Frame = 0


Query: 4   GKSPTP-----ATQEVQQSNGARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQK- 63
           G++P P      T + Q         +KPVFV+V+QLKPGT+GHTLTVKVV  N+V QK 
Sbjct: 27  GRNPPPPSSSTRTSQNQPPQHTPQEKKKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKP 86

Query: 64  GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLA 123
           G + S HLR  RI+ECLVGDET  ILFTARNDQV+L+KPG T+ LRNAKIDMFKGSMRLA
Sbjct: 87  GAASSSHLRPARISECLVGDETACILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLA 146

Query: 124 VDKWGRIELTEPAKFVVKEDNNLSLVEYELVNVAEE 154
           VDKWGRIE TEPA   VKEDNNLSLVEYELVNV EE
Sbjct: 147 VDKWGRIEATEPADITVKEDNNLSLVEYELVNVVEE 182

[Close]

BLAST of Sgr028169 vs. TAIR 10
Match: AT1G23750.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 197.2 bits (500), Expect = 9.6e-51
Identity = 92/136 (67.65%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 17  SNGARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGRSVSQHLRQTRIAECLVG 76
           ++  +AGL+KP F +V+QL+PGT+GH + VK+VS+  VLQKGR+     RQ RI+EC+VG
Sbjct: 2   ADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVG 61

Query: 77  DETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELTEPAKFVVKE 136
           DETG I+FTARNDQVDL+K G+T+ LRNAKIDM+KGSMRLAVDKWGR+E+TEPA F VKE
Sbjct: 62  DETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKE 121

Query: 137 DNNLSLVEYELVNVAE 153
           D N+SL+EYELVNV E
Sbjct: 122 DTNMSLIEYELVNVVE 137

[Close]

BLAST of Sgr028169 vs. TAIR 10
Match: AT4G28440.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-47
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 17  SNGARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQKGR------SVSQHLRQTRI 76
           + G     RKPVFV+VEQLKPGT GHTLTVKV+ +N V+   R      S+S+  + +RI
Sbjct: 10  ATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRI 69

Query: 77  AECLVGDETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELTEPA 136
            ECL+GDETG ILFTARNDQVDL+KPG T+ILRN++IDMFKG+MRL VDKWGRIE T  A
Sbjct: 70  VECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAA 129

Query: 137 KFVVKEDNNLSLVEYELVNV 151
            F VKEDNNLSLVEYEL+NV
Sbjct: 130 SFTVKEDNNLSLVEYELINV 149

[Close]

BLAST of Sgr028169 vs. TAIR 10
Match: AT1G10590.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.7e-44
Identity = 87/134 (64.93%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 20  ARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGD 79
           A + LRKPVF +V +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGD
Sbjct: 4   ATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGD 63

Query: 80  ETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELT-EPAKFVVKE 139
           ETG I+FTARNDQVD++K G+ + LRNAKIDM+KGSMRLAVD+WGR+E+  EP    VK+
Sbjct: 64  ETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKD 123

Query: 140 DNNLSLVEYELVNV 151
           DNNLSL+EYELV+V
Sbjct: 124 DNNLSLIEYELVSV 137

[Close]

BLAST of Sgr028169 vs. TAIR 10
Match: AT1G10590.3 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.7e-44
Identity = 87/134 (64.93%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 20  ARAGLRKPVFVQVEQLKPGTNGHTLTVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGD 79
           A + LRKPVF +V +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGD
Sbjct: 18  ATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGD 77

Query: 80  ETGTILFTARNDQVDLVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELT-EPAKFVVKE 139
           ETG I+FTARNDQVD++K G+ + LRNAKIDM+KGSMRLAVD+WGR+E+  EP    VK+
Sbjct: 78  ETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKD 137

Query: 140 DNNLSLVEYELVNV 151
           DNNLSL+EYELV+V
Sbjct: 138 DNNLSLIEYELVSV 151

The following BLAST results are available for this feature:

BLAST of Sgr028169 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139613.1	8.6e-70	92.86	uncharacterized protein At4g28440-like [Momordica charantia]	[more]
XP_038899654.1	1.5e-69	92.21	uncharacterized protein At4g28440-like [Benincasa hispida]	[more]
XP_004146043.1	7.3e-69	90.91	uncharacterized protein At4g28440 [Cucumis sativus] >KGN55099.1 hypothetical pro...	[more]
XP_008463705.1	1.2e-68	90.26	PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo] >KAA0066804.1 N...	[more]
XP_023535412.1	7.1e-64	86.93	uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr028169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49453	6.9e-46	67.14	Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 P...	[more]

BLAST of Sgr028169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG19	4.2e-70	92.86	uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0L242	3.5e-69	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629450 PE=4 SV=1	[more]
A0A5D3DWE0	6.0e-69	90.26	Nucleic acid-binding OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384...	[more]
A0A1S3CKC4	6.0e-69	90.26	uncharacterized protein At4g28440-like OS=Cucumis melo OX=3656 GN=LOC103501787 P...	[more]
A0A6J1FBC1	4.5e-64	86.27	uncharacterized protein At4g28440-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of Sgr028169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33845.1	1.5e-51	68.59	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G23750.1	9.6e-51	67.65	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G28440.1	4.9e-47	67.14	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.1	1.7e-44	64.93	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.3	1.7e-44	64.93	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 39..142 e-value: 8.8E-45 score: 153.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31472	OS05G0244600 PROTEIN	coord: 9..153
None	No IPR available	PANTHER	PTHR31472:SF26	SUBFAMILY NOT NAMED	coord: 9..153
None	No IPR available	CDD	cd04491	SoSSB_OBF	coord: 43..126 e-value: 2.49096E-18 score: 72.6557
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 22..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr028169.1	Sgr028169.1	mRNA