Sgr027981 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr027981
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionSerine hydroxymethyltransferase
Locationtig00153056: 2140475 .. 2141016 (-)
RNA-Seq ExpressionSgr027981
SyntenySgr027981
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTTCTTCGTCGTCTACAACCCCTCGCCGATCGTCGATGCGATACTGTCACTGTGGTTTTTCAGGCGTTGTTGTCGCTGTTTCTGCTGCTTCTACTCCTATCCGTAGGTGGCCGTCGAATTCCTTTTCTTCTTCTTCTTCTGCTATTTTGGGGAATATGGATTTTCGGCACGCCCAGCCGGATCTTTCTTTACGGTTTAGTTCTCACCCCACATCTTCAGTATCTAGGAGTTCGATTGGGGACAATTCGAGCTATTTGTGTTCGACGGCTTCGAATTCGTCGTATCCATTGCAATTCCATGAGCAAAGGGCGAGAAATTCGGTTCTGCCGATGATCATAGCGAAGACGAGAAGTTTAGCCTTTTGGGGCAGCCATTGCGTGTGAAGAGGCAGAGAGACGGCCAATCATTTCTCAACCAGGATGTGCGAAACGGGTCGCGGTCGCGGATGAATCGAGCCTTGAGGCGAGACGAGCGTCAGTTAGGGCATGGGGGAATCAGTCGCTTCGAATCGCTGACCCGGAAATTCATGAAATAA

mRNA sequence

ATGGAAGTTTCTTCGTCGTCTACAACCCCTCGCCGATCGTCGATGCGATACTGTCACTGTGGTTTTTCAGGCGTTGTTGTCGCTGTTTCTGCTGCTTCTACTCCTATCCGTAGGTGGCCGTCGAATTCCTTTTCTTCTTCTTCTTCTGCTATTTTGGGGAATATGGATTTTCGGCACGCCCAGCCGGATCTTTCTTTACGGTTTAGTTCTCACCCCACATCTTCAGGCGAGAAATTCGGTTCTGCCGATGATCATAGCGAAGACGAGAAGTTTAGCCTTTTGGGGCAGCCATTGCGTGTGAAGAGGCAGAGAGACGGCCAATCATTTCTCAACCAGGATGTGCGAAACGGGTCGCGGTCGCGGATGAATCGAGCCTTGAGGCGAGACGAGCGTCAGTTAGGGCATGGGGGAATCAGTCGCTTCGAATCGCTGACCCGGAAATTCATGAAATAA

Coding sequence (CDS)

ATGGAAGTTTCTTCGTCGTCTACAACCCCTCGCCGATCGTCGATGCGATACTGTCACTGTGGTTTTTCAGGCGTTGTTGTCGCTGTTTCTGCTGCTTCTACTCCTATCCGTAGGTGGCCGTCGAATTCCTTTTCTTCTTCTTCTTCTGCTATTTTGGGGAATATGGATTTTCGGCACGCCCAGCCGGATCTTTCTTTACGGTTTAGTTCTCACCCCACATCTTCAGGCGAGAAATTCGGTTCTGCCGATGATCATAGCGAAGACGAGAAGTTTAGCCTTTTGGGGCAGCCATTGCGTGTGAAGAGGCAGAGAGACGGCCAATCATTTCTCAACCAGGATGTGCGAAACGGGTCGCGGTCGCGGATGAATCGAGCCTTGAGGCGAGACGAGCGTCAGTTAGGGCATGGGGGAATCAGTCGCTTCGAATCGCTGACCCGGAAATTCATGAAATAA

Protein sequence

MEVSSSSTTPRRSSMRYCHCGFSGVVVAVSAASTPIRRWPSNSFSSSSSAILGNMDFRHAQPDLSLRFSSHPTSSGEKFGSADDHSEDEKFSLLGQPLRVKRQRDGQSFLNQDVRNGSRSRMNRALRRDERQLGHGGISRFESLTRKFMK
Homology
[Close]
BLAST of Sgr027981 vs. NCBI nr
Match: XP_022980970.1 (serine hydroxymethyltransferase 7-like [Cucurbita maxima])

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 52/93 (55.91%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHAQ DLSLRFSSH TSS                               EKF    G
Sbjct: 1   MDFRHAQSDLSLRFSSHATSSISRSSIGDNSSYLCSTASNSSYLLELREQKDEKFNFVKG 60

[Close]
BLAST of Sgr027981 vs. NCBI nr
Match: XP_023524836.1 (serine hydroxymethyltransferase 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 52/93 (55.91%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHAQ DLSLRFSSH TSS                               EKF    G
Sbjct: 1   MDFRHAQSDLSLRFSSHATSSISRSSIGDNSSYLCSTASNSSYLLELREQKDEKFNFVKG 60

[Close]
BLAST of Sgr027981 vs. NCBI nr
Match: KAG7031702.1 (Serine hydroxymethyltransferase 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 52/93 (55.91%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHAQ DLSLRFSSH TSS                               EKF    G
Sbjct: 1   MDFRHAQSDLSLRFSSHATSSISRSSIGDNSSYLCSTASNSSYLLELREQKDEKFNFVKG 60

[Close]
BLAST of Sgr027981 vs. NCBI nr
Match: XP_022941000.1 (serine hydroxymethyltransferase 7-like [Cucurbita moschata])

HSP 1 Score: 82.4 bits (202), Expect = 3.6e-12
Identity = 51/93 (54.84%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHAQ DLSLRFSSH TSS                               EKF    G
Sbjct: 1   MDFRHAQSDLSLRFSSHATSSISRSSIGDNSSYLCSTASNSSYLLELREQKDEKFNFVKG 60

[Close]
BLAST of Sgr027981 vs. NCBI nr
Match: KAG6608069.1 (Serine hydroxymethyltransferase 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11
Identity = 51/93 (54.84%), Postives = 52/93 (55.91%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHAQ DLSLRFSSH TSS                               EKF    G
Sbjct: 1   MDFRHAQSDLSLRFSSHATSSISRSSIGDNSSYLCSTASNSSYLLELREQKDEKFNFVKG 60

[Close]
BLAST of Sgr027981 vs. ExPASy TrEMBL
Match: A0A6J1IY33 (Serine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111480261 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.0e-13
Identity = 52/93 (55.91%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHAQ DLSLRFSSH TSS                               EKF    G
Sbjct: 1   MDFRHAQSDLSLRFSSHATSSISRSSIGDNSSYLCSTASNSSYLLELREQKDEKFNFVKG 60

[Close]
BLAST of Sgr027981 vs. ExPASy TrEMBL
Match: A0A6J1FSB1 (Serine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111446415 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 51/93 (54.84%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHAQ DLSLRFSSH TSS                               EKF    G
Sbjct: 1   MDFRHAQSDLSLRFSSHATSSISRSSIGDNSSYLCSTASNSSYLLELREQKDEKFNFVKG 60

[Close]
BLAST of Sgr027981 vs. ExPASy TrEMBL
Match: A0A0A0L3A9 (Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G377740 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.1e-10
Identity = 48/93 (51.61%), Postives = 49/93 (52.69%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHA  DLS R SSH TSS                               EKF    G
Sbjct: 1   MDFRHAPSDLSFRLSSHTTSSISRSSTGDNSSYLCSTGSNSSYPSDFPQHKDEKFDLVKG 60

[Close]
BLAST of Sgr027981 vs. ExPASy TrEMBL
Match: A0A5A7VB49 (Serine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001500 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08
Identity = 51/113 (45.13%), Postives = 54/113 (47.79%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHA  DLS R SSH TSS                               EKF    G
Sbjct: 1   MDFRHAPSDLSFRLSSHTTSSISRSSTGDNSSYLCSTGSNSSYPSDFRQQKDEKFDLVKG 60

Query: 115 SADDHSEDEKFSLLGQPLRVKRQRDGQSFLNQDVRNGSRSRMNRALRRDERQL 134
             DD S+DEKFSLLGQPLRVKRQRD  SFL+QD          RA  +DE  L
Sbjct: 61  VVDDDSDDEKFSLLGQPLRVKRQRDAHSFLDQD-------SAKRAAVKDEASL 106

[Close]
BLAST of Sgr027981 vs. ExPASy TrEMBL
Match: A0A1S3B9K5 (Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103487552 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08
Identity = 51/113 (45.13%), Postives = 54/113 (47.79%), Query Frame = 0 

Query: 55  MDFRHAQPDLSLRFSSHPTSS------------------------------GEKF----G 114
           MDFRHA  DLS R SSH TSS                               EKF    G
Sbjct: 1   MDFRHAPSDLSFRLSSHTTSSISRSSTGDNSSYLCSTGSNSSYPSDFRQQKDEKFDLVKG 60

Query: 115 SADDHSEDEKFSLLGQPLRVKRQRDGQSFLNQDVRNGSRSRMNRALRRDERQL 134
             DD S+DEKFSLLGQPLRVKRQRD  SFL+QD          RA  +DE  L
Sbjct: 61  VVDDDSDDEKFSLLGQPLRVKRQRDAHSFLDQD-------SAKRAAVKDEASL 106

The following BLAST results are available for this feature:
BLAST of Sgr027981 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022980970.11.2e-1255.91serine hydroxymethyltransferase 7-like [Cucurbita maxima][more]
XP_023524836.11.2e-1255.91serine hydroxymethyltransferase 7-like [Cucurbita pepo subsp. pepo][more]
KAG7031702.11.2e-1255.91Serine hydroxymethyltransferase 6 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022941000.13.6e-1254.84serine hydroxymethyltransferase 7-like [Cucurbita moschata][more]
KAG6608069.11.4e-1154.84Serine hydroxymethyltransferase 6, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Sgr027981 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr027981 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IY336.0e-1355.91Serine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111480261 PE=3... [more]
A0A6J1FSB11.7e-1254.84Serine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111446415 PE... [more]
A0A0A0L3A98.1e-1051.61Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G377740 PE=3 ... [more]
A0A5A7VB492.6e-0845.13Serine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3B9K52.6e-0845.13Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103487552 PE=3 SV=... [more]
BLAST of Sgr027981 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr027981.1Sgr027981.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:0044281 small molecule metabolic process
molecular_function GO:0003824 catalytic activity